cluster # 3231

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Oryza sativa
cluster # 3231 cluster # 3231 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_3231#0 length = 607 sequences # 2

consensusID : consensus_3231#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 607
fasta sequence

                              [TTATTTTATTGAAAACACAATTTAGAGTTCCATTCTCTTAGAATGCCAACAAAGCAGCCAAAGCAAAAAGCACAAAAGAAATTCCCATGA-TGGAAGCTTCACTG-GAACCACTTCCATTTGAG-TTGCTACCACCC-GAGTTGGAGTTGCCATTCGA-GCTGTCTCCA-GGACAACTACTAG-GTGTGAA-AGGAGCATCGCACAATAAATCTCGGGTGCGGAACGCTTGTTCAGGAGCTGGACCCCATTTGCTTGGGACCTCGACGTAAGTTCGAGCCAAATCCTTCTCTGCTTCACAGATGCAATCATTCTCTTGGGAACTTTGGAATGCGTCACAACCAAACTCATCGACCAGCTGATAGTAGGTGCAAGCTATTTCCAGACATAACTCGGCTTGAATAGCATCGTACTGATCGTAGCACGAGCAATACATGCACTCATAAAAATCGTTGTCGCAAGTAACTTTGCTGGTGGCATCACAGGCTCCATAGCACAGATCGTGTTGTTCGCAGCAGTGACCGAATGAAAAGCTAGGTCCAGTAAAAGGAATTGACTCAGGACCACAGCCATTGCTGCTGGGTGGGCTATTAGGGTCAGGAACCAATTGCTGTCC]

[+] EMBL BI306382             [TTATTTTATTGAAAACACAATTTAGAGTTCCATTCTCTTAGAATGCCAACAAAGCAGCCAAAGCAAAAAGCACAAAAGAAATTCCCATGA TGGAAGCTTCACTG GAACCACTTCCATTTGAG TTGCTACCACCC GAGTTGGAGTTGCCATTCGA GCTGTCTCCA GGACAACTACTAG GTGTGAA AGGAGCATCGCACAATAAATCTCGGGTGCGGAACGCTTGTTCAGGAGCTGGACCCCATTTGCTTGGGACCTCGACGTAAGTTCGAGCCAAATCCTTCTCTGCTTCACAGATGCAATCATTCTCTTGGGAACTTTGGAATGCGTCACAACCAAACTCATCGACCAGCTGATAGTAGGTGCAAGCTATTTCCAGACATAACTCGGCTTGAATAGCATCGTACTGATCGTAGCACGAGCAATACATGCACTCATAAAAATCGTTGTCGCAAGTAACTTTGCTGGTGGCATCACAGGCTCCATAGCACAGATCGTGTTGTTCGCAGCAGTGACCGAATGAAAAGCTAGGTCCAGTAAAAGGAATTGACTCAGGACCACAGCCATTGCTGCTGGGTGGGCTATTAGGGTCAGGAACCAATTGCTGTCC]
[+] EMBL BU673318             [TTATTTTATTGAAAACACAATTTAGAGTTCCATTCTCTTAGAATGCCAACAAAGCAGCCAAAGCAAAAAGCACAAAAGAAATTCCCATGACTGGAAGCTTCACTGTGAACCACTTCCATTTGAGATTGCTACCACCCTGCGTTGGAGTTGCCATTCGACGCTGTCTCCACGGACAACTACTAGCGTGTGAACAGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                  ]




>consensus_3231#0
TTATTTTATTGAAAACACAATTTAGAGTTCCATTCTCTTAGAATGCCAACAAAGCAGCCA
AAGCAAAAAGCACAAAAGAAATTCCCATGATGGAAGCTTCACTGGAACCACTTCCATTTG
AGTTGCTACCACCCGAGTTGGAGTTGCCATTCGAGCTGTCTCCAGGACAACTACTAGGTG
TGAAAGGAGCATCGCACAATAAATCTCGGGTGCGGAACGCTTGTTCAGGAGCTGGACCCC
ATTTGCTTGGGACCTCGACGTAAGTTCGAGCCAAATCCTTCTCTGCTTCACAGATGCAAT
CATTCTCTTGGGAACTTTGGAATGCGTCACAACCAAACTCATCGACCAGCTGATAGTAGG
TGCAAGCTATTTCCAGACATAACTCGGCTTGAATAGCATCGTACTGATCGTAGCACGAGC
AATACATGCACTCATAAAAATCGTTGTCGCAAGTAACTTTGCTGGTGGCATCACAGGCTC
CATAGCACAGATCGTGTTGTTCGCAGCAGTGACCGAATGAAAAGCTAGGTCCAGTAAAAG
GAATTGACTCAGGACCACAGCCATTGCTGCTGGGTGGGCTATTAGGGTCAGGAACCAATT
GCTGTCC

clustalw multiple alignements is not computed in this case