cluster # 3573

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 3573 cluster # 3573 Sequences # 2 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_3573#0 length = 1659 sequences # 2
consensusID : consensus_3573#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1659
fasta sequence
                              [TGTCGTTTGTAGTGAGCTCGCGTGATGAGCTTCGGTGGCATGTTCGATGGCGCCGGCTCCGGCGTCTTCTCCTACGACGCCGGCGGCGGCGGCGGCGGCGGCGGAGTACACAACTCCCGCCTCCTCCCTACGCCGCCCGTCCCCAAGCCCGGCGGCGGGTTCGCCGCTCCCGGCCTCTCTCTCGGCCTGCAAACTATGGACGGTAGCCAGCTCGGCGACGTGAACCGGTCGCTTGCCATGATGGGCAACGGCGGGAGCGGCAGCGGCGGCGACGGCGACTCGCTCCAGCGACAGTGCCAGTATCTCGCATGCTGAAGCTGGCGCAGCGGATGACGGACAACTTCTGCGCGGGGGTGTGCGCGTCGGCGGCGCAGAAGTGGCGGCGCCTGGACGAGTGGCGCGGCGAGGGTGGGGGCGGCGGCGGTGGCGGCGGCGGGGACGGGGAGGACAAGGTGCGGATGATGGCGCGGCACAGCGTGGGCGCGCCGGGGGAGCCGCCGGGCGTCGTGCTGAGCGCCACCACGTCGGTGCGGCTCCCCGGCACGCTGCCGCAGCGCGTGTTCGACTACCTCCGCGACGAGCAGCGGCGCGGCGACTGGGACATCCTTGCCAACGGCGAGGCCATGCAGGAGATGGACCACATCGCCAAGGGCCAGCACCACGGCAATGCCGTCTCCCTCCTCCGTCCAAATGCCACAAGCGGGAACCAGAACAACATGCTGATCCTCCAGGAGACGTGCACCGACTCATCGGGCTCCCTCGTCGTCTACGCTCCGGTGGACGTGCAGTCGATGCACGTCGTCATGAACGGCGGCGACTCCGCCTACGTCTCCCTCCTCCCCTCCGGCTTCGCCATCCTCCCCGACGGCCACAACAATGGCGCCTCGCCGTCTCCGGCAGAGGTCGGCAGCGGCGCCTCGCCGAACTCCGCCGCCGGTGGCGGTGGCGGTAGCAACAACACCGGGTCGCTGGTGACGGTGGCGTTCCAGATACTCGTCAACAACCTGCCGACGGCGAAGCTCACCGTGGAGTCCGTCGACACCGTCAGCAACCTCCTCTCCTGCACCATCCAGAAGATCAAGTCGGCACTGCAGGCCAGCATCATCTCACCATAGATAAGTGGACATTTGACGTGGATTCCGACTCGACCATTTTTGAGTCGAGTCGGATGCCATCTCAAATGTCTAACTTTTGAAGGTTAGAAGACTGAGAGGACTTCCGCGGCGGGCGATGGCCGACCGAAACTGGCTGATGGATGCAACTCAATCGTTGATCAGGTAGAGTTTTCGAGAGGCGATATGCGAGCGAGGATAAAAATAAAATTAAGTTATATATAGTGTGTGGAGTATATTTGCATAGATGAGCAAATTAAATGGGGTGAGTTGCAGAGGGATCAAGTCAAGAACGAACCTTGCGCTAGGCTTGGCTCAAGCTGATGTGGTGGTTCGGGTATTGACTTAGTCTCTGGTGAAAATAAACCCCTAGGGCTTTGATCTCCTATATATATCTAGCAGTTTGCTTAATTTAACCATTTTGTGAAGTTTTTTTTAATTCTCCAAAATGGGGGAAATATAGAGAAACAATACTGATCAGATCCCCAAGATCGTTGGTGTTTGTTTAGTTTGCATAATGTTGGAATGAGTTGATATATAAACATGT]

[+] EMBL AK071877             [TGTCGTTTGTAGTGAGCTCGCGTGATGAGCTTCGGTGGCATGTTCGATGGCGCCGGCTCCGGCGTCTTCTCCTACGACGCCGGCGGCGGCGGCGGCGGCGGCGGAGTACACAACTCCCGCCTCCTCCCTACGCCGCCCGTCCCCAAGCCCGGCGGCGGGTTCGCCGCTCCCGGCCTCTCTCTCGGCCTGCAAACTATGGACGGTAGCCAGCTCGGCGACGTGAACCGGTCGCTTGCCATGATGGGCAACGGCGGGAGCGGCAGCGGCGGCGACGGCGACTCGCTCCAGCGACAGTGCCAGTATCTCGCATGCTGAAGCTGGCGCAGCGGATGACGGACAACTTCTGCGCGGGGGTGTGCGCGTCGGCGGCGCAGAAGTGGCGGCGCCTGGACGAGTGGCGCGGCGAGGGTGGGGGCGGCGGCGGTGGCGGCGGCGGGGACGGGGAGGACAAGGTGCGGATGATGGCGCGGCACAGCGTGGGCGCGCCGGGGGAGCCGCCGGGCGTCGTGCTGAGCGCCACCACGTCGGTGCGGCTCCCCGGCACGCTGCCGCAGCGCGTGTTCGACTACCTCCGCGACGAGCAGCGGCGCGGCGACTGGGACATCCTTGCCAACGGCGAGGCCATGCAGGAGATGGACCACATCGCCAAGGGCCAGCACCACGGCAATGCCGTCTCCCTCCTCCGTCCAAATGCCACAAGCGGGAACCAGAACAACATGCTGATCCTCCAGGAGACGTGCACCGACTCATCGGGCTCCCTCGTCGTCTACGCTCCGGTGGACGTGCAGTCGATGCACGTCGTCATGAACGGCGGCGACTCCGCCTACGTCTCCCTCCTCCCCTCCGGCTTCGCCATCCTCCCCGACGGCCACAACAATGGCGCCTCGCCGTCTCCGGCAGAGGTCGGCAGCGGCGCCTCGCCGAACTCCGCCGCCGGTGGCGGTGGCGGTAGCAACAACACCGGGTCGCTGGTGACGGTGGCGTTCCAGATACTCGTCAACAACCTGCCGACGGCGAAGCTCACCGTGGAGTCCGTCGACACCGTCAGCAACCTCCTCTCCTGCACCATCCAGAAGATCAAGTCGGCACTGCAGGCCAGCATCATCTCACCATAGATAAGTGGACATTTGACGTGGATTCCGACTCGACCATTTTTGAGTCGAGTCGGATGCCATCTCAAATGTCTAACTTTTGAAGGTTAGAAGACTGAGAGGACTTCCGCGGCGGGCGATGGCCGACCGAAACTGGCTGATGGATGCAACTCAATCGTTGATCAGGTAGAGTTTTCGAGAGGCGATATGCGAGCGAGGATAAAAATAAAATTAAGTTATATATAGTGTGTGGAGTATATTTGCATAGATGAGCAAATTAAATGGGGTGAGTTGCAGAGGGATCAAGTCAAGAACGAACCTTGCGCTAGGCTTGGCTCAAGCTGATGTGGTGGTTCGGGTATTGACTTAGTCTCTGGTGAAAATAAACCCCTAGGGCTTTGATCTCCTATATATATCTAGCAGTTTGCTTAATTTAACCATTTTGTGAAGTTTTTTTTAATTCTCCAAAATGGGGGAAATATAGAGAAACAATACTGATCAGATCCCCAAGATCGTTGGTGTTTGTTTAGTTTGCATAATGTTGGAATGAGTTGATATATAAACATGT]
[+] EMBL D42215               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ccAAACTGGCTGATGGATGCAACTCAATCGTTGATCAGGTAGAGTTTTCGAGAGGCGATATGCGAGCGAGGATAAAAATAAAATTAAGTTATATATAGTGTGTGGAGTATATTTGCATAGATGAGCAAATTAAATGGGGTGAGTTGCAGAGGGATC AGTCAgac                                                                                                                                                                                                                                                               ]




>consensus_3573#0
TGTCGTTTGTAGTGAGCTCGCGTGATGAGCTTCGGTGGCATGTTCGATGGCGCCGGCTCC
GGCGTCTTCTCCTACGACGCCGGCGGCGGCGGCGGCGGCGGCGGAGTACACAACTCCCGC
CTCCTCCCTACGCCGCCCGTCCCCAAGCCCGGCGGCGGGTTCGCCGCTCCCGGCCTCTCT
CTCGGCCTGCAAACTATGGACGGTAGCCAGCTCGGCGACGTGAACCGGTCGCTTGCCATG
ATGGGCAACGGCGGGAGCGGCAGCGGCGGCGACGGCGACTCGCTCCAGCGACAGTGCCAG
TATCTCGCATGCTGAAGCTGGCGCAGCGGATGACGGACAACTTCTGCGCGGGGGTGTGCG
CGTCGGCGGCGCAGAAGTGGCGGCGCCTGGACGAGTGGCGCGGCGAGGGTGGGGGCGGCG
GCGGTGGCGGCGGCGGGGACGGGGAGGACAAGGTGCGGATGATGGCGCGGCACAGCGTGG
GCGCGCCGGGGGAGCCGCCGGGCGTCGTGCTGAGCGCCACCACGTCGGTGCGGCTCCCCG
GCACGCTGCCGCAGCGCGTGTTCGACTACCTCCGCGACGAGCAGCGGCGCGGCGACTGGG
ACATCCTTGCCAACGGCGAGGCCATGCAGGAGATGGACCACATCGCCAAGGGCCAGCACC
ACGGCAATGCCGTCTCCCTCCTCCGTCCAAATGCCACAAGCGGGAACCAGAACAACATGC
TGATCCTCCAGGAGACGTGCACCGACTCATCGGGCTCCCTCGTCGTCTACGCTCCGGTGG
ACGTGCAGTCGATGCACGTCGTCATGAACGGCGGCGACTCCGCCTACGTCTCCCTCCTCC
CCTCCGGCTTCGCCATCCTCCCCGACGGCCACAACAATGGCGCCTCGCCGTCTCCGGCAG
AGGTCGGCAGCGGCGCCTCGCCGAACTCCGCCGCCGGTGGCGGTGGCGGTAGCAACAACA
CCGGGTCGCTGGTGACGGTGGCGTTCCAGATACTCGTCAACAACCTGCCGACGGCGAAGC
TCACCGTGGAGTCCGTCGACACCGTCAGCAACCTCCTCTCCTGCACCATCCAGAAGATCA
AGTCGGCACTGCAGGCCAGCATCATCTCACCATAGATAAGTGGACATTTGACGTGGATTC
CGACTCGACCATTTTTGAGTCGAGTCGGATGCCATCTCAAATGTCTAACTTTTGAAGGTT
AGAAGACTGAGAGGACTTCCGCGGCGGGCGATGGCCGACCGAAACTGGCTGATGGATGCA
ACTCAATCGTTGATCAGGTAGAGTTTTCGAGAGGCGATATGCGAGCGAGGATAAAAATAA
AATTAAGTTATATATAGTGTGTGGAGTATATTTGCATAGATGAGCAAATTAAATGGGGTG
AGTTGCAGAGGGATCAAGTCAAGAACGAACCTTGCGCTAGGCTTGGCTCAAGCTGATGTG
GTGGTTCGGGTATTGACTTAGTCTCTGGTGAAAATAAACCCCTAGGGCTTTGATCTCCTA
TATATATCTAGCAGTTTGCTTAATTTAACCATTTTGTGAAGTTTTTTTTAATTCTCCAAA
ATGGGGGAAATATAGAGAAACAATACTGATCAGATCCCCAAGATCGTTGGTGTTTGTTTA
GTTTGCATAATGTTGGAATGAGTTGATATATAAACATGT
clustalw multiple alignements is not computed in this case