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Oryza sativa
cluster # 368 cluster # 368       Sequences # 2       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_368#0 length = 3020 sequences # 1  
 consensus_368#1 length = 679 sequences # 1  
consensusID : consensus_368#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3020
fasta sequence 
                              [AGAGCAGCCTCCAATGGCGCTTCCTCCTCCTCCTCCCTTCTCGCTCTCGCGCTCTTCTCGCGTCTGCGTAGGCGTGGCACACGCCGTCCCCCACAGATCCGCGGAAACTGTACCAGATGCCGCCCCGCAGCTCTTGCTCATGCGCGCGCACGCGCGCGCCGGCCGCATGCAGCCCGCGCGTCAGGCGTTCGACGCAATGCTGCCGCGGGACAGGTCGCTCGTCGCCTGGACCGTGCTCATGTCAGGGTATGCCACGCACGGGCCGGCCTCCGAGGCGCTGGACCTGCTGCTCCGCATGGTGGAGTGGCCGCTGAGGCCCGACGCGTTCGTCTTCTCCGTCGCGCTGCGCGCCTGCGCAGCCGCCGGGAGCCTCGGCGTCGGAAGGCAGGTCCACGCCGCCGCAGCCAAGATGGGGTACGTCGGGGCCGACCTCTTCGTGGCGAACGGCCTCGTCACGATGTACGCGAGCTGCCGGTCGTTGGGTTGCGCCGAGAAGGTGTTCAGTGGTATTGCCGCGCCGGATTCGGTTTCTTGGACTTCAATGCTCAGCGCCTACACTGAAAACGGCTGCGACACTCAGGCGCTAATGCTGTTCCTGGAAATGATCCATGGTGGCGTTTCATGTGATGCGTACACTCTCTCTGTTGCACTCCGAGCAGCTTCCAGCTTGGGCCATGTCCGTTTGGGATATCAGCTGCATTGCTACATGATCAAGTCAGGATTCGTTCCCAGTGAATTCTTGGAGAACTGCCTGATCGAGTTCTATGGTAGGTGCAGGGAATTGCAGCTGATGCAGAAAGTGTTTGATGAGATGAATGCGAAGGACTTGGTTTCTTGGAATATTGTCATCCAATGCTATGCGGACAACCTGTGTGATGAGGAGGCTTTGGTTCATTTCCGGGATCTGATGTACAAATGCGCAGAATGCGATGAGTATACACTGGGCAGTATTTTGCATGTTATTACTAGAAGATGTGCTTTTGATTATGGCAGGGAAATTCATGGTTACCTCATTAGGGCTGGTTTGGACTCGGATAAGTATGTCATGAGTGCTCTCATGGATATGTATGTCAATTGGGCCACTCTGCGCAAGAGCCGGTCTATGTTACCTTTGAGAATGCTTAAGTACTATTTATCGGTACAGGGAAAGCTGGATCAGTTCATTGTGGCCAGCAGTTTGAAGTCATGTGCTTCTGATCTTGATTTGGCTGCAGGACGGATGCTACATGCCTGCGTATTAAAGTTTGATGTGAATCCGGATCCTTTTGTGATCAGTTCATTGGTTGACATGTATGCTAAATGCGGTTCTTTGGAGGAAGCACATATTCTATTCTCGAGAACTAAGGATCCTTGCACAGTTGCATGGTCCGCTATAATATCAGGCAGCTGTTTGAACGGTCAGTTTGAAAGAGCGATCCATTTGTTTCGGACAATGCAGTTGGAGCATGTACAACCTAATGAATTTACATACACATCTGTACTTACAGCATGCATGGCTCTTGGGGATGTTGTAAGTGGAATGGAAATCCATAGCAACTCGATCAGAAATGGTTATGGAACCAGTGATTCTGTTCTGAGAAGCCTGATTAGCTTTTACTTAAGAGAAGGACAGTTCAACCAGGCCCTTCGCTTGTGCTTGTCACTCTCAAATAGTGAAATTTCTTGGGGTACGCTGTTTCAAGAGTTTGCTGAACTTGGTGATCATCTTGGAATACTTAATCTTTTTCATGTAATCCAACGTTCTGGTGGGGTGCTTGACTACCCAACTGCATGTCTTATCTTGAGTTCTTGTGGAAAGAAAGCACATCTTCCTGAAGGGTTGCAAGCACATGCCTACCTTATGAAGCGTGGACTTTCTTCTACAGGCTGTATGTGCGATTACCTTATCGACATGTATTCAGGTTGTGGTAGCCTCACACATGCATTTGAGGCCTTCAGAAATACTTCAGGCAGGAATTCTTCTTCTTGGACCTCAATAATCATGGCTAGTGTAGAAAATGGTTGTCCAGAGACAGCCATTCGCCTGTTTGTGCAGATGTTAAGGAAGGAGAAATCACCAAATTCCCTAGCATTCTTATCGGTGCTGAAGGCCTGTGCGGAAATCGGCCTTGTAAATGAAGCTTTCCAGTTCTTTGTATCCATGACCGAGGTTTACAAAATACAACCTTCAGAGGAGCATTACTCCCACATGATTGAGGTTTTGGGCCGTGCTGGCATGTTCAAGGAAGCAGAGCATTTCATTGATAGTGTAGTCCCTTCAGAATCTGGTGCTTCAGCCTGGAGTTTACTCTGTTCTGCTGCCAAACAGAATGGAAATGCCAAAACCATGAGGCTTGCAGCAGACAGGCTATCAAAACTTACTCCGGATGGTTGTTGAGCAAATGCTCCACCTGGAAAATCCTCACAAATCACTTCCATGTTAATATAGCACTAACATTATGGAGATACTAACAGTCAGTTTGTCCAGTGGAGGTATGAATTGTCAGCTTGTAGGTCGCACAGCATCCGCACATTTTACCAGCGGACCAAGAGAGTCTCCACTTTCCACTCTTGGAGTCTTGCTTTGAAAATTCCTGTATATGCAATTCTTTTTTTTAAGGGAAATGCCTTTACCAGACAGAAATTTGGCCTTTACCAGTGGTATCGTTCGACAGTTTATTGCAAAAGATTCTGCAGGGTTGGGGGTATTGTATAGTATAGTGGCAGTAGTGAACATTGTAACTGCAAATTGTTGTACTCCTAATTTGTATATATAGGTACTACACTTTAGACGATGTACATAATTTCTTCTGTCTTTGGTTGGAATATGATTCTTCTAGCAAAAAGGGGAAAAGATTCCACTGGGTTATTATGATTAAAAGCAAGATCTCTTGTTGTATTTTGATTCAGTAATACAACAATGTTGAATCAATGCCTACAGTAAAAATTCACACTCCAAGAAAGTTCTTAAGTCAACCAACGAAGAGATGACCATTGATTAGGTAGATTGTATTGAGAATTTATGATAAATAAAACACGGC]

[+] EMBL AK068598             [AGAGCAGCCTCCAATGGCGCTTCCTCCTCCTCCTCCCTTCTCGCTCTCGCGCTCTTCTCGCGTCTGCGTAGGCGTGGCACACGCCGTCCCCCACAGATCCGCGGAAACTGTACCAGATGCCGCCCCGCAGCTCTTGCTCATGCGCGCGCACGCGCGCGCCGGCCGCATGCAGCCCGCGCGTCAGGCGTTCGACGCAATGCTGCCGCGGGACAGGTCGCTCGTCGCCTGGACCGTGCTCATGTCAGGGTATGCCACGCACGGGCCGGCCTCCGAGGCGCTGGACCTGCTGCTCCGCATGGTGGAGTGGCCGCTGAGGCCCGACGCGTTCGTCTTCTCCGTCGCGCTGCGCGCCTGCGCAGCCGCCGGGAGCCTCGGCGTCGGAAGGCAGGTCCACGCCGCCGCAGCCAAGATGGGGTACGTCGGGGCCGACCTCTTCGTGGCGAACGGCCTCGTCACGATGTACGCGAGCTGCCGGTCGTTGGGTTGCGCCGAGAAGGTGTTCAGTGGTATTGCCGCGCCGGATTCGGTTTCTTGGACTTCAATGCTCAGCGCCTACACTGAAAACGGCTGCGACACTCAGGCGCTAATGCTGTTCCTGGAAATGATCCATGGTGGCGTTTCATGTGATGCGTACACTCTCTCTGTTGCACTCCGAGCAGCTTCCAGCTTGGGCCATGTCCGTTTGGGATATCAGCTGCATTGCTACATGATCAAGTCAGGATTCGTTCCCAGTGAATTCTTGGAGAACTGCCTGATCGAGTTCTATGGTAGGTGCAGGGAATTGCAGCTGATGCAGAAAGTGTTTGATGAGATGAATGCGAAGGACTTGGTTTCTTGGAATATTGTCATCCAATGCTATGCGGACAACCTGTGTGATGAGGAGGCTTTGGTTCATTTCCGGGATCTGATGTACAAATGCGCAGAATGCGATGAGTATACACTGGGCAGTATTTTGCATGTTATTACTAGAAGATGTGCTTTTGATTATGGCAGGGAAATTCATGGTTACCTCATTAGGGCTGGTTTGGACTCGGATAAGTATGTCATGAGTGCTCTCATGGATATGTATGTCAATTGGGCCACTCTGCGCAAGAGCCGGTCTATGTTACCTTTGAGAATGCTTAAGTACTATTTATCGGTACAGGGAAAGCTGGATCAGTTCATTGTGGCCAGCAGTTTGAAGTCATGTGCTTCTGATCTTGATTTGGCTGCAGGACGGATGCTACATGCCTGCGTATTAAAGTTTGATGTGAATCCGGATCCTTTTGTGATCAGTTCATTGGTTGACATGTATGCTAAATGCGGTTCTTTGGAGGAAGCACATATTCTATTCTCGAGAACTAAGGATCCTTGCACAGTTGCATGGTCCGCTATAATATCAGGCAGCTGTTTGAACGGTCAGTTTGAAAGAGCGATCCATTTGTTTCGGACAATGCAGTTGGAGCATGTACAACCTAATGAATTTACATACACATCTGTACTTACAGCATGCATGGCTCTTGGGGATGTTGTAAGTGGAATGGAAATCCATAGCAACTCGATCAGAAATGGTTATGGAACCAGTGATTCTGTTCTGAGAAGCCTGATTAGCTTTTACTTAAGAGAAGGACAGTTCAACCAGGCCCTTCGCTTGTGCTTGTCACTCTCAAATAGTGAAATTTCTTGGGGTACGCTGTTTCAAGAGTTTGCTGAACTTGGTGATCATCTTGGAATACTTAATCTTTTTCATGTAATCCAACGTTCTGGTGGGGTGCTTGACTACCCAACTGCATGTCTTATCTTGAGTTCTTGTGGAAAGAAAGCACATCTTCCTGAAGGGTTGCAAGCACATGCCTACCTTATGAAGCGTGGACTTTCTTCTACAGGCTGTATGTGCGATTACCTTATCGACATGTATTCAGGTTGTGGTAGCCTCACACATGCATTTGAGGCCTTCAGAAATACTTCAGGCAGGAATTCTTCTTCTTGGACCTCAATAATCATGGCTAGTGTAGAAAATGGTTGTCCAGAGACAGCCATTCGCCTGTTTGTGCAGATGTTAAGGAAGGAGAAATCACCAAATTCCCTAGCATTCTTATCGGTGCTGAAGGCCTGTGCGGAAATCGGCCTTGTAAATGAAGCTTTCCAGTTCTTTGTATCCATGACCGAGGTTTACAAAATACAACCTTCAGAGGAGCATTACTCCCACATGATTGAGGTTTTGGGCCGTGCTGGCATGTTCAAGGAAGCAGAGCATTTCATTGATAGTGTAGTCCCTTCAGAATCTGGTGCTTCAGCCTGGAGTTTACTCTGTTCTGCTGCCAAACAGAATGGAAATGCCAAAACCATGAGGCTTGCAGCAGACAGGCTATCAAAACTTACTCCGGATGGTTGTTGAGCAAATGCTCCACCTGGAAAATCCTCACAAATCACTTCCATGTTAATATAGCACTAACATTATGGAGATACTAACAGTCAGTTTGTCCAGTGGAGGTATGAATTGTCAGCTTGTAGGTCGCACAGCATCCGCACATTTTACCAGCGGACCAAGAGAGTCTCCACTTTCCACTCTTGGAGTCTTGCTTTGAAAATTCCTGTATATGCAATTCTTTTTTTTAAGGGAAATGCCTTTACCAGACAGAAATTTGGCCTTTACCAGTGGTATCGTTCGACAGTTTATTGCAAAAGATTCTGCAGGGTTGGGGGTATTGTATAGTATAGTGGCAGTAGTGAACATTGTAACTGCAAATTGTTGTACTCCTAATTTGTATATATAGGTACTACACTTTAGACGATGTACATAATTTCTTCTGTCTTTGGTTGGAATATGATTCTTCTAGCAAAAAGGGGAAAAGATTCCACTGGGTTATTATGATTAAAAGCAAGATCTCTTGTTGTATTTTGATTCAGTAATACAACAATGTTGAATCAATGCCTACAGTAAAAATTCACACTCCAAGAAAGTTCTTAAGTCAACCAACGAAGAGATGACCATTGATTAGGTAGATTGTATTGAGAATTTATGATAAATAAAACACGGC]




>consensus_368#0
AGAGCAGCCTCCAATGGCGCTTCCTCCTCCTCCTCCCTTCTCGCTCTCGCGCTCTTCTCG
CGTCTGCGTAGGCGTGGCACACGCCGTCCCCCACAGATCCGCGGAAACTGTACCAGATGC
CGCCCCGCAGCTCTTGCTCATGCGCGCGCACGCGCGCGCCGGCCGCATGCAGCCCGCGCG
TCAGGCGTTCGACGCAATGCTGCCGCGGGACAGGTCGCTCGTCGCCTGGACCGTGCTCAT
GTCAGGGTATGCCACGCACGGGCCGGCCTCCGAGGCGCTGGACCTGCTGCTCCGCATGGT
GGAGTGGCCGCTGAGGCCCGACGCGTTCGTCTTCTCCGTCGCGCTGCGCGCCTGCGCAGC
CGCCGGGAGCCTCGGCGTCGGAAGGCAGGTCCACGCCGCCGCAGCCAAGATGGGGTACGT
CGGGGCCGACCTCTTCGTGGCGAACGGCCTCGTCACGATGTACGCGAGCTGCCGGTCGTT
GGGTTGCGCCGAGAAGGTGTTCAGTGGTATTGCCGCGCCGGATTCGGTTTCTTGGACTTC
AATGCTCAGCGCCTACACTGAAAACGGCTGCGACACTCAGGCGCTAATGCTGTTCCTGGA
AATGATCCATGGTGGCGTTTCATGTGATGCGTACACTCTCTCTGTTGCACTCCGAGCAGC
TTCCAGCTTGGGCCATGTCCGTTTGGGATATCAGCTGCATTGCTACATGATCAAGTCAGG
ATTCGTTCCCAGTGAATTCTTGGAGAACTGCCTGATCGAGTTCTATGGTAGGTGCAGGGA
ATTGCAGCTGATGCAGAAAGTGTTTGATGAGATGAATGCGAAGGACTTGGTTTCTTGGAA
TATTGTCATCCAATGCTATGCGGACAACCTGTGTGATGAGGAGGCTTTGGTTCATTTCCG
GGATCTGATGTACAAATGCGCAGAATGCGATGAGTATACACTGGGCAGTATTTTGCATGT
TATTACTAGAAGATGTGCTTTTGATTATGGCAGGGAAATTCATGGTTACCTCATTAGGGC
TGGTTTGGACTCGGATAAGTATGTCATGAGTGCTCTCATGGATATGTATGTCAATTGGGC
CACTCTGCGCAAGAGCCGGTCTATGTTACCTTTGAGAATGCTTAAGTACTATTTATCGGT
ACAGGGAAAGCTGGATCAGTTCATTGTGGCCAGCAGTTTGAAGTCATGTGCTTCTGATCT
TGATTTGGCTGCAGGACGGATGCTACATGCCTGCGTATTAAAGTTTGATGTGAATCCGGA
TCCTTTTGTGATCAGTTCATTGGTTGACATGTATGCTAAATGCGGTTCTTTGGAGGAAGC
ACATATTCTATTCTCGAGAACTAAGGATCCTTGCACAGTTGCATGGTCCGCTATAATATC
AGGCAGCTGTTTGAACGGTCAGTTTGAAAGAGCGATCCATTTGTTTCGGACAATGCAGTT
GGAGCATGTACAACCTAATGAATTTACATACACATCTGTACTTACAGCATGCATGGCTCT
TGGGGATGTTGTAAGTGGAATGGAAATCCATAGCAACTCGATCAGAAATGGTTATGGAAC
CAGTGATTCTGTTCTGAGAAGCCTGATTAGCTTTTACTTAAGAGAAGGACAGTTCAACCA
GGCCCTTCGCTTGTGCTTGTCACTCTCAAATAGTGAAATTTCTTGGGGTACGCTGTTTCA
AGAGTTTGCTGAACTTGGTGATCATCTTGGAATACTTAATCTTTTTCATGTAATCCAACG
TTCTGGTGGGGTGCTTGACTACCCAACTGCATGTCTTATCTTGAGTTCTTGTGGAAAGAA
AGCACATCTTCCTGAAGGGTTGCAAGCACATGCCTACCTTATGAAGCGTGGACTTTCTTC
TACAGGCTGTATGTGCGATTACCTTATCGACATGTATTCAGGTTGTGGTAGCCTCACACA
TGCATTTGAGGCCTTCAGAAATACTTCAGGCAGGAATTCTTCTTCTTGGACCTCAATAAT
CATGGCTAGTGTAGAAAATGGTTGTCCAGAGACAGCCATTCGCCTGTTTGTGCAGATGTT
AAGGAAGGAGAAATCACCAAATTCCCTAGCATTCTTATCGGTGCTGAAGGCCTGTGCGGA
AATCGGCCTTGTAAATGAAGCTTTCCAGTTCTTTGTATCCATGACCGAGGTTTACAAAAT
ACAACCTTCAGAGGAGCATTACTCCCACATGATTGAGGTTTTGGGCCGTGCTGGCATGTT
CAAGGAAGCAGAGCATTTCATTGATAGTGTAGTCCCTTCAGAATCTGGTGCTTCAGCCTG
GAGTTTACTCTGTTCTGCTGCCAAACAGAATGGAAATGCCAAAACCATGAGGCTTGCAGC
AGACAGGCTATCAAAACTTACTCCGGATGGTTGTTGAGCAAATGCTCCACCTGGAAAATC
CTCACAAATCACTTCCATGTTAATATAGCACTAACATTATGGAGATACTAACAGTCAGTT
TGTCCAGTGGAGGTATGAATTGTCAGCTTGTAGGTCGCACAGCATCCGCACATTTTACCA
GCGGACCAAGAGAGTCTCCACTTTCCACTCTTGGAGTCTTGCTTTGAAAATTCCTGTATA
TGCAATTCTTTTTTTTAAGGGAAATGCCTTTACCAGACAGAAATTTGGCCTTTACCAGTG
GTATCGTTCGACAGTTTATTGCAAAAGATTCTGCAGGGTTGGGGGTATTGTATAGTATAG
TGGCAGTAGTGAACATTGTAACTGCAAATTGTTGTACTCCTAATTTGTATATATAGGTAC
TACACTTTAGACGATGTACATAATTTCTTCTGTCTTTGGTTGGAATATGATTCTTCTAGC
AAAAAGGGGAAAAGATTCCACTGGGTTATTATGATTAAAAGCAAGATCTCTTGTTGTATT
TTGATTCAGTAATACAACAATGTTGAATCAATGCCTACAGTAAAAATTCACACTCCAAGA
AAGTTCTTAAGTCAACCAACGAAGAGATGACCATTGATTAGGTAGATTGTATTGAGAATT
TATGATAAATAAAACACGGC

consensusID : consensus_368#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 679
fasta sequence 
                              [TTCAGAAATACTTCAGGCAGGAATTCTTCTTCTTGGACCTCAATAATCATGGCTAGTGTAGAAAATGGTTGTCCAGAGACAGCCATTCGCCTGTTTGTGCAGATGTTAAGGAAGGAGAAATCACCAAANTTCCCTATCATTCTNATCGGTGCTGAAGGCCTGTGCGGAAATCGGCCTTGTAAATGAAGCTTTCCAGTTCTTTGTATCCATGACCGAGGTTTACAAAATACAACCTTCAGAGGAGCATTACTCCCACATGATTGAGGTTTTGGGCCGTGCTGGCATGTTCAAGGGAGCAGAGCATTTCATTGATAGTGTAGTCCCTTCAGAATCTGGTGCTTCAGCCTGGAGTTTACTCTGTTCTGCTGCCAAACAGAATGGAAATGCCAAAACCATGAGGCTTGCAGCAGACAGGCTATCAAAACTTACTCCGGATGGTTGTTGAGCAAATGCTCCACCTGGAAAATCCTCACAAATCACTTCCATGTTAATATAGCACTAACATTATGGTGATACCAACAGTCAGTTTGTCCAGTGGAGGTATGAATTGTCAGCTTGTAGGTCGCACAGCATCCGCACATTTTACCAGCGGACCAAGAGAGTCTCCACTTTCCACTCTTGGAGTCTTGCTTTGAAAATTCCTGTATATGCAATTCTTTTTTTTAAAAAAAAAAAAAAA]

[-] EMBL CA760269             [TTCAGAAATACTTCAGGCAGGAATTCTTCTTCTTGGACCTCAATAATCATGGCTAGTGTAGAAAATGGTTGTCCAGAGACAGCCATTCGCCTGTTTGTGCAGATGTTAAGGAAGGAGAAATCACCAAANTTCCCTATCATTCTNATCGGTGCTGAAGGCCTGTGCGGAAATCGGCCTTGTAAATGAAGCTTTCCAGTTCTTTGTATCCATGACCGAGGTTTACAAAATACAACCTTCAGAGGAGCATTACTCCCACATGATTGAGGTTTTGGGCCGTGCTGGCATGTTCAAGGGAGCAGAGCATTTCATTGATAGTGTAGTCCCTTCAGAATCTGGTGCTTCAGCCTGGAGTTTACTCTGTTCTGCTGCCAAACAGAATGGAAATGCCAAAACCATGAGGCTTGCAGCAGACAGGCTATCAAAACTTACTCCGGATGGTTGTTGAGCAAATGCTCCACCTGGAAAATCCTCACAAATCACTTCCATGTTAATATAGCACTAACATTATGGTGATACCAACAGTCAGTTTGTCCAGTGGAGGTATGAATTGTCAGCTTGTAGGTCGCACAGCATCCGCACATTTTACCAGCGGACCAAGAGAGTCTCCACTTTCCACTCTTGGAGTCTTGCTTTGAAAATTCCTGTATATGCAATTCTTTTTTTTAAAAAAAAAAAAAAA]




>consensus_368#1
TTCAGAAATACTTCAGGCAGGAATTCTTCTTCTTGGACCTCAATAATCATGGCTAGTGTA
GAAAATGGTTGTCCAGAGACAGCCATTCGCCTGTTTGTGCAGATGTTAAGGAAGGAGAAA
TCACCAAANTTCCCTATCATTCTNATCGGTGCTGAAGGCCTGTGCGGAAATCGGCCTTGT
AAATGAAGCTTTCCAGTTCTTTGTATCCATGACCGAGGTTTACAAAATACAACCTTCAGA
GGAGCATTACTCCCACATGATTGAGGTTTTGGGCCGTGCTGGCATGTTCAAGGGAGCAGA
GCATTTCATTGATAGTGTAGTCCCTTCAGAATCTGGTGCTTCAGCCTGGAGTTTACTCTG
TTCTGCTGCCAAACAGAATGGAAATGCCAAAACCATGAGGCTTGCAGCAGACAGGCTATC
AAAACTTACTCCGGATGGTTGTTGAGCAAATGCTCCACCTGGAAAATCCTCACAAATCAC
TTCCATGTTAATATAGCACTAACATTATGGTGATACCAACAGTCAGTTTGTCCAGTGGAG
GTATGAATTGTCAGCTTGTAGGTCGCACAGCATCCGCACATTTTACCAGCGGACCAAGAG
AGTCTCCACTTTCCACTCTTGGAGTCTTGCTTTGAAAATTCCTGTATATGCAATTCTTTT
TTTTAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_368#0      AGAGCAGCCTCCAATGGCGCTTCCTCCTCCTCCTCCCTTCTCGCTCTCGCGCTCTTCTCG 60
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      CGTCTGCGTAGGCGTGGCACACGCCGTCCCCCACAGATCCGCGGAAACTGTACCAGATGC 120
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      CGCCCCGCAGCTCTTGCTCATGCGCGCGCACGCGCGCGCCGGCCGCATGCAGCCCGCGCG 180
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      TCAGGCGTTCGACGCAATGCTGCCGCGGGACAGGTCGCTCGTCGCCTGGACCGTGCTCAT 240
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      GTCAGGGTATGCCACGCACGGGCCGGCCTCCGAGGCGCTGGACCTGCTGCTCCGCATGGT 300
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      GGAGTGGCCGCTGAGGCCCGACGCGTTCGTCTTCTCCGTCGCGCTGCGCGCCTGCGCAGC 360
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      CGCCGGGAGCCTCGGCGTCGGAAGGCAGGTCCACGCCGCCGCAGCCAAGATGGGGTACGT 420
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      CGGGGCCGACCTCTTCGTGGCGAACGGCCTCGTCACGATGTACGCGAGCTGCCGGTCGTT 480
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      GGGTTGCGCCGAGAAGGTGTTCAGTGGTATTGCCGCGCCGGATTCGGTTTCTTGGACTTC 540
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      AATGCTCAGCGCCTACACTGAAAACGGCTGCGACACTCAGGCGCTAATGCTGTTCCTGGA 600
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      AATGATCCATGGTGGCGTTTCATGTGATGCGTACACTCTCTCTGTTGCACTCCGAGCAGC 660
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      TTCCAGCTTGGGCCATGTCCGTTTGGGATATCAGCTGCATTGCTACATGATCAAGTCAGG 720
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      ATTCGTTCCCAGTGAATTCTTGGAGAACTGCCTGATCGAGTTCTATGGTAGGTGCAGGGA 780
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      ATTGCAGCTGATGCAGAAAGTGTTTGATGAGATGAATGCGAAGGACTTGGTTTCTTGGAA 840
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      TATTGTCATCCAATGCTATGCGGACAACCTGTGTGATGAGGAGGCTTTGGTTCATTTCCG 900
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      GGATCTGATGTACAAATGCGCAGAATGCGATGAGTATACACTGGGCAGTATTTTGCATGT 960
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      TATTACTAGAAGATGTGCTTTTGATTATGGCAGGGAAATTCATGGTTACCTCATTAGGGC 1020
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      TGGTTTGGACTCGGATAAGTATGTCATGAGTGCTCTCATGGATATGTATGTCAATTGGGC 1080
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      CACTCTGCGCAAGAGCCGGTCTATGTTACCTTTGAGAATGCTTAAGTACTATTTATCGGT 1140
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      ACAGGGAAAGCTGGATCAGTTCATTGTGGCCAGCAGTTTGAAGTCATGTGCTTCTGATCT 1200
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      TGATTTGGCTGCAGGACGGATGCTACATGCCTGCGTATTAAAGTTTGATGTGAATCCGGA 1260
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      TCCTTTTGTGATCAGTTCATTGGTTGACATGTATGCTAAATGCGGTTCTTTGGAGGAAGC 1320
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      ACATATTCTATTCTCGAGAACTAAGGATCCTTGCACAGTTGCATGGTCCGCTATAATATC 1380
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      AGGCAGCTGTTTGAACGGTCAGTTTGAAAGAGCGATCCATTTGTTTCGGACAATGCAGTT 1440
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      GGAGCATGTACAACCTAATGAATTTACATACACATCTGTACTTACAGCATGCATGGCTCT 1500
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      TGGGGATGTTGTAAGTGGAATGGAAATCCATAGCAACTCGATCAGAAATGGTTATGGAAC 1560
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      CAGTGATTCTGTTCTGAGAAGCCTGATTAGCTTTTACTTAAGAGAAGGACAGTTCAACCA 1620
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      GGCCCTTCGCTTGTGCTTGTCACTCTCAAATAGTGAAATTTCTTGGGGTACGCTGTTTCA 1680
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      AGAGTTTGCTGAACTTGGTGATCATCTTGGAATACTTAATCTTTTTCATGTAATCCAACG 1740
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      TTCTGGTGGGGTGCTTGACTACCCAACTGCATGTCTTATCTTGAGTTCTTGTGGAAAGAA 1800
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      AGCACATCTTCCTGAAGGGTTGCAAGCACATGCCTACCTTATGAAGCGTGGACTTTCTTC 1860
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      TACAGGCTGTATGTGCGATTACCTTATCGACATGTATTCAGGTTGTGGTAGCCTCACACA 1920
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      TGCATTTGAGGCCTTCAGAAATACTTCAGGCAGGAATTCTTCTTCTTGGACCTCAATAAT 1980
consensus_368#1      -------------TTCAGAAATACTTCAGGCAGGAATTCTTCTTCTTGGACCTCAATAAT 47
                                  ***********************************************

consensus_368#0      CATGGCTAGTGTAGAAAATGGTTGTCCAGAGACAGCCATTCGCCTGTTTGTGCAGATGTT 2040
consensus_368#1      CATGGCTAGTGTAGAAAATGGTTGTCCAGAGACAGCCATTCGCCTGTTTGTGCAGATGTT 107
                     ************************************************************

consensus_368#0      AAGGAAGGAGAAATCACCAAATT-CCCTAGCATTCTTATCGGTGCTGAAGGCCTGTGCGG 2099
consensus_368#1      AAGGAAGGAGAAATCACCAAANTTCCCTATCATTCTNATCGGTGCTGAAGGCCTGTGCGG 167
                     ********************* * ***** ****** ***********************

consensus_368#0      AAATCGGCCTTGTAAATGAAGCTTTCCAGTTCTTTGTATCCATGACCGAGGTTTACAAAA 2159
consensus_368#1      AAATCGGCCTTGTAAATGAAGCTTTCCAGTTCTTTGTATCCATGACCGAGGTTTACAAAA 227
                     ************************************************************

consensus_368#0      TACAACCTTCAGAGGAGCATTACTCCCACATGATTGAGGTTTTGGGCCGTGCTGGCATGT 2219
consensus_368#1      TACAACCTTCAGAGGAGCATTACTCCCACATGATTGAGGTTTTGGGCCGTGCTGGCATGT 287
                     ************************************************************

consensus_368#0      TCAAGGAAGCAGAGCATTTCATTGATAGTGTAGTCCCTTCAGAATCTGGTGCTTCAGCCT 2279
consensus_368#1      TCAAGGGAGCAGAGCATTTCATTGATAGTGTAGTCCCTTCAGAATCTGGTGCTTCAGCCT 347
                     ****** *****************************************************

consensus_368#0      GGAGTTTACTCTGTTCTGCTGCCAAACAGAATGGAAATGCCAAAACCATGAGGCTTGCAG 2339
consensus_368#1      GGAGTTTACTCTGTTCTGCTGCCAAACAGAATGGAAATGCCAAAACCATGAGGCTTGCAG 407
                     ************************************************************

consensus_368#0      CAGACAGGCTATCAAAACTTACTCCGGATGGTTGTTGAGCAAATGCTCCACCTGGAAAAT 2399
consensus_368#1      CAGACAGGCTATCAAAACTTACTCCGGATGGTTGTTGAGCAAATGCTCCACCTGGAAAAT 467
                     ************************************************************

consensus_368#0      CCTCACAAATCACTTCCATGTTAATATAGCACTAACATTATGGAGATACTAACAGTCAGT 2459
consensus_368#1      CCTCACAAATCACTTCCATGTTAATATAGCACTAACATTATGGTGATACCAACAGTCAGT 527
                     ******************************************* ***** **********

consensus_368#0      TTGTCCAGTGGAGGTATGAATTGTCAGCTTGTAGGTCGCACAGCATCCGCACATTTTACC 2519
consensus_368#1      TTGTCCAGTGGAGGTATGAATTGTCAGCTTGTAGGTCGCACAGCATCCGCACATTTTACC 587
                     ************************************************************

consensus_368#0      AGCGGACCAAGAGAGTCTCCACTTTCCACTCTTGGAGTCTTGCTTTGAAAATTCCTGTAT 2579
consensus_368#1      AGCGGACCAAGAGAGTCTCCACTTTCCACTCTTGGAGTCTTGCTTTGAAAATTCCTGTAT 647
                     ************************************************************

consensus_368#0      ATGCAATTCTTTTTTTTAAGGGAAATGCCTTTACCAGACAGAAATTTGGCCTTTACCAGT 2639
consensus_368#1      ATGCAATTCTTTTTTTTAAAAAAAAAAAAAAA---------------------------- 679
                     *******************   ***                                   

consensus_368#0      GGTATCGTTCGACAGTTTATTGCAAAAGATTCTGCAGGGTTGGGGGTATTGTATAGTATA 2699
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      GTGGCAGTAGTGAACATTGTAACTGCAAATTGTTGTACTCCTAATTTGTATATATAGGTA 2759
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      CTACACTTTAGACGATGTACATAATTTCTTCTGTCTTTGGTTGGAATATGATTCTTCTAG 2819
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      CAAAAAGGGGAAAAGATTCCACTGGGTTATTATGATTAAAAGCAAGATCTCTTGTTGTAT 2879
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      TTTGATTCAGTAATACAACAATGTTGAATCAATGCCTACAGTAAAAATTCACACTCCAAG 2939
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      AAAGTTCTTAAGTCAACCAACGAAGAGATGACCATTGATTAGGTAGATTGTATTGAGAAT 2999
consensus_368#1      ------------------------------------------------------------
                                                                                 

consensus_368#0      TTATGATAAATAAAACACGGC 3020
consensus_368#1      ---------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)