cluster # 4005

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Oryza sativa
cluster # 4005 cluster # 4005 Sequences # 3 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4005#0 length = 2675 sequences # 2

consensus_4005#1 length = 1389 sequences # 1

consensusID : consensus_4005#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2675
fasta sequence

                              [CTCCCATCCTCTCCACCTCAATCCCTCTCGCCGCCATGGCCGCCGCCGCCATTGTTGTCTTGCTCGTCTGCTCGCTGCCGTCTCTGCTCGTCTGCTCGCTGCCGTCTCTGCTCGTCGGCGCCGCTGCTGCGGGCGGGCGGGGAGAAGCAGTCGTACGTCGTGTATCTTGGAGAGCACGCCCATGGCGAGCGGCTGGGCGCCGCCGCCGCCGCTGACGTCGACGTCGAGGCGCTCGCGCGGCAGGCGGAGGATTCGCACTGCGAGCTCCTCGCCGGCGTCCTCGGAGACAAGGAGAAGGCGCGGGAGGCCATCTTCTACTCGCACACGCGCCACATCAACGGCTTCGCGGCCAACCTCGACGCCGCCGCCGCCGCCAAGATCGCCGAGAAGCCGGGCGTCGTGTCGGTGTTCCCGAACAGAGGCCACAAGCTGCACACGACGCGTTCGTGGCAATTCCTCGGCCTCGCCGGCGTCGGCGGCGCCCCCACCGGCGCCGCCTGGAAGAAGGCCAGGTTCGGCGAGGACACCATCATCGGCAACCTCGACACCGGTGTGTGGCCAGAATCAGAGAGCTTCAGGGATGATGGATTGGGGCCTATTCCATCGTGGTGGAGAGGAGAATGCCAGAAAGGCCAAGATGATGCATTCTCTTGCAACAGGAAGCTGATCGGTGCGCGCTTCTTCAACAAGGGGTACGCGTCGGCGGTGGGCAACCTCAACACCTCCCTCTTCGACACGCCGCGCGACACCGACGGCCACGGCACGCACACGCTCTCCACGGCGGGCGGCGCGCCGGTGGCCGGCGCCAGCGTCTTCGGCTACGGCAACGGCACGGCGAGCGGCGGCTCGCCGATGGCGCGCGTGGCTGCGTACCGCGTCTGCTACACCCCCGTCAACGGCAGCGAGTGCTTCGACGCCGACATCCTCGCCGCGTTCGACGCCGCCATCCACGACGGCGTCCACGTCCTCTCCGTCTCCCTCGGCGGCGACGCGGGCGACTACTTCGCCGACGGCCTCGCCATCGGCTCCTTCCACGCCGTCCGCCACGGCATCGCCGTTGTCTGCTCCGCCGGCAACTCGGGCCCCGCCCCCGGCACCGTCTCCAACGTCGCGCCGTGGCTCTTCACCGCCGCCGCGAGCACCATGGACCGCGAGTTCCCTGCCTACGTCGTCTTCAACGACACCAAGCTCAAGGGCCAGAGCCTCTCCGCCTCCGCCCTCTCGCCGGCGTCGAGCTCCTTCCCCATGATCGACTCCTCCCTAGCTGCCTCTCCCAACCGGACTCAAAACGAATCGCAGCTTTGTTTCCTGGGATCGCTTGATCCGGAGAAGGTGAAGGGGAAGATCGTGGTGTGCTTGAGAGGAGTGAACCCGAGGGTGGAGAAGGGCGAGGCGGTGCTGGAAGCCGGCGGCGCCGGGATGGTGCTCGCCAACGACGTCACCACCGGCAACGAGATCATCGCTGACGCCCATGTCCTCCCCGCCACCCACATCAAGTTCAGCGACGGCCAGATCCTCTTCTCCTACCTCAAGAACACCAAGAGTCCGGCGGGGACGATAACGAGGCCGGAGACGAGGCTGGGGACGAAGCCGGCGCCTTTCATGGCGGCGTTCTCGTCGCAGGGGCCGAACACGGTGACGCCGGGGATCCTGAAGCCGGACATCACGGCGCCCGGGGTGAGCGTGGTGGCGGCGTGGACGCGAGCCAGCGCGCCGACGGACCTCGCCTTCGACAAGCGCCGCGTCGCCTTCAACTCCGAGTTCGGGACGTCCATGTGCGTACCCGCACGTCACCGGCGTCGTCGGCGTGCTCCGCACGCTGCGCCCCGACTGGAGCCCCGCGGCGACTCGCTCCGCGCTCATGACCACCGCCGTCGAGGTGGACAACGAGCGGCACGCCATCCTCAACTCCTCCTTCGCCGCCGCCAACCCGGTTCGGGTGTCGGCGCCGGCCACGTCTCCCCGGCCCGCGCCATGAACCCGGGCCTCGTCTACGACCTCGCCGCCGTCGACTACCTCAACTTCCTCTGCTCCCTCAGCTACAACGCCACCGTCATGGCCATGTTCGCCGGCGGCGGCGGCGCGGCGCCGTTCCGGTGCCCGGCCTCGCCGCCCAAGGTGCAGGACCTCAACTACCCGTCCATCACCGTCGTCAACCTCACCTCGTCGGCCACCGTCCGGCGCACGGTGAAGAACGTCGGCAAGCCGGGGGTCTACAAGGCGTACGTGACCTCGCCGGCCGGCGTGCGCGTCACGGTGAGCCCGGACACGCTGCCGTTCTTGCTCAAGGGGGAGAAGAAGACGTTCCAGGTGAGGTTCGAGGTGACGAACGCGTCGCTCGCCATGGATTACTCCTTCGGCGCGCTCGTCTGGACCAACGGCAAGCAGTTCGTCAGGTCGCCTCTCGTGGTGAAGACGACGACGCCGACGATGGCATGATCGTGATTAATAATTATTAATTATATATAGGGTATTGGTTGATTAATTATTAATCGATTTAATTAGGTTTAGGAGGGGTGGTGGTGTGTAAAGAAGCAGACATAATTAAACGTTTGTTTGAATTCTTTAGCTTCAGAAAATCTAAATGTTTCATGTGCATTTGCTCGGAAAGTCATGGAAAATTCTGAAAAAAGAAAAGAAAATCAATAATAATACCCGTTACAGTAGAAAAAAAA]

[+] EMBL AK120287             [CTCCCATCCTCTCCACCTCAATCCCTCTCGCCGCCATGGCCGCCGCCGCCATTGTTGTCTTGCTCGTCTGCTCGCTGCCGTCTCTGCTCGTCTGCTCGCTGCCGTCTCTGCTCGTCGGCGCCGCTGCTGCGGGCGGGCGGGGAGAAGCAGTCGTACGTCGTGTATCTTGGAGAGCACGCCCATGGCGAGCGGCTGGGCGCCGCCGCCGCCGCTGACGTCGACGTCGAGGCGCTCGCGCGGCAGGCGGAGGATTCGCACTGCGAGCTCCTCGCCGGCGTCCTCGGAGACAAGGAGAAGGCGCGGGAGGCCATCTTCTACTCGCACACGCGCCACATCAACGGCTTCGCGGCCAACCTCGACGCCGCCGCCGCCGCCAAGATCGCCGAGAAGCCGGGCGTCGTGTCGGTGTTCCCGAACAGAGGCCACAAGCTGCACACGACGCGTTCGTGGCAATTCCTCGGCCTCGCCGGCGTCGGCGGCGCCCCCACCGGCGCCGCCTGGAAGAAGGCCAGGTTCGGCGAGGACACCATCATCGGCAACCTCGACACCGGTGTGTGGCCAGAATCAGAGAGCTTCAGGGATGATGGATTGGGGCCTATTCCATCGTGGTGGAGAGGAGAATGCCAGAAAGGCCAAGATGATGCATTCTCTTGCAACAGGAAGCTGATCGGTGCGCGCTTCTTCAACAAGGGGTACGCGTCGGCGGTGGGCAACCTCAACACCTCCCTCTTCGACACGCCGCGCGACACCGACGGCCACGGCACGCACACGCTCTCCACGGCGGGCGGCGCGCCGGTGGCCGGCGCCAGCGTCTTCGGCTACGGCAACGGCACGGCGAGCGGCGGCTCGCCGATGGCGCGCGTGGCTGCGTACCGCGTCTGCTACACCCCCGTCAACGGCAGCGAGTGCTTCGACGCCGACATCCTCGCCGCGTTCGACGCCGCCATCCACGACGGCGTCCACGTCCTCTCCGTCTCCCTCGGCGGCGACGCGGGCGACTACTTCGCCGACGGCCTCGCCATCGGCTCCTTCCACGCCGTCCGCCACGGCATCGCCGTTGTCTGCTCCGCCGGCAACTCGGGCCCCGCCCCCGGCACCGTCTCCAACGTCGCGCCGTGGCTCTTCACCGCCGCCGCGAGCACCATGGACCGCGAGTTCCCTGCCTACGTCGTCTTCAACGACACCAAGCTCAAGGGCCAGAGCCTCTCCGCCTCCGCCCTCTCGCCGGCGTCGAGCTCCTTCCCCATGATCGACTCCTCCCTAGCTGCCTCTCCCAACCGGACTCAAAACGAATCGCAGCTTTGTTTCCTGGGATCGCTTGATCCGGAGAAGGTGAAGGGGAAGATCGTGGTGTGCTTGAGAGGAGTGAACCCGAGGGTGGAGAAGGGCGAGGCGGTGCTGGAAGCCGGCGGCGCCGGGATGGTGCTCGCCAACGACGTCACCACCGGCAACGAGATCATCGCTGACGCCCATGTCCTCCCCGCCACCCACATCAAGTTCAGCGACGGCCAGATCCTCTTCTCCTACCTCAAGAACACCAAGAGTCCGGCGGGGACGATAACGAGGCCGGAGACGAGGCTGGGGACGAAGCCGGCGCCTTTCATGGCGGCGTTCTCGTCGCAGGGGCCGAACACGGTGACGCCGGGGATCCTGAAGCCGGACATCACGGCGCCCGGGGTGAGCGTGGTGGCGGCGTGGACGCGAGCCAGCGCGCCGACGGACCTCGCCTTCGACAAGCGCCGCGTCGCCTTCAACTCCGAGTTCGGGACGTCCATGTGCGTACCCGCACGTCACCGGCGTCGTCGGCGTGCTCCGCACGCTGCGCCCCGACTGGAGCCCCGCGGCGACTCGCTCCGCGCTCATGACCACCGCCGTCGAGGTGGACAACGAGCGGCACGCCATCCTCAACTCCTCCTTCGCCGCCGCCAACCCGGTTCGGGTGTCGGCGCCGGCCACGTCTCCCCGGCCCGCGCCATGAACCCGGGCCTCGTCTACGACCTCGCCGCCGTCGACTACCTCAACTTCCTCTGCTCCCTCAGCTACAACGCCACCGTCATGGCCATGTTCGCCGGCGGCGGCGGCGCGGCGCCGTTCCGGTGCCCGGCCTCGCCGCCCAAGGTGCAGGACCTCAACTACCCGTCCATCACCGTCGTCAACCTCACCTCGTCGGCCACCGTCCGGCGCACGGTGAAGAACGTCGGCAAGCCGGGGGTCTACAAGGCGTACGTGACCTCGCCGGCCGGCGTGCGCGTCACGGTGAGCCCGGACACGCTGCCGTTCTTGCTCAAGGGGGAGAAGAAGACGTTCCAGGTGAGGTTCGAGGTGACGAACGCGTCGCTCGCCATGGATTACTCCTTCGGCGCGCTCGTCTGGACCAACGGCAAGCAGTTCGTCAGGTCGCCTCTCGTGGTGAAGACGACGACGCCGACGATGGCATGATCGTGATTAATAATTATTAATTATATATAGGGTATTGGTTGATTAATTATTAATCGATTTAATTAGGTTTAGGAGGGGTGGTGGTGTGTAAAGAAGCAGACATAATTAAACGTTTGTTTGAATTCTTTAGCTTCAGAAAATCTAAATGTTTCATGT                                                                                ]
[-] EMBL CA760776             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGAGGACGA GACAAGG  GGCATGATCGTGATTAATAATTATTAATTATATATAGGGTATTGGTTTATTAATTATTAATCGATTTAATTAGGTTTAGGAGGGGTGGTGGTGTGTAAAGAAGCAGACATAATTAAACGTTTGTTTGAATTCTTTAGCTTCAGAAAATCTAAATGTTTCATGTGCATTTGCTCGGAAAGTCATGGAAAATTCTGAAAAAAGAAAAGAAAATCAATAATAATACCCGTTACAGTAGAAAAAAAA]




>consensus_4005#0
CTCCCATCCTCTCCACCTCAATCCCTCTCGCCGCCATGGCCGCCGCCGCCATTGTTGTCT
TGCTCGTCTGCTCGCTGCCGTCTCTGCTCGTCTGCTCGCTGCCGTCTCTGCTCGTCGGCG
CCGCTGCTGCGGGCGGGCGGGGAGAAGCAGTCGTACGTCGTGTATCTTGGAGAGCACGCC
CATGGCGAGCGGCTGGGCGCCGCCGCCGCCGCTGACGTCGACGTCGAGGCGCTCGCGCGG
CAGGCGGAGGATTCGCACTGCGAGCTCCTCGCCGGCGTCCTCGGAGACAAGGAGAAGGCG
CGGGAGGCCATCTTCTACTCGCACACGCGCCACATCAACGGCTTCGCGGCCAACCTCGAC
GCCGCCGCCGCCGCCAAGATCGCCGAGAAGCCGGGCGTCGTGTCGGTGTTCCCGAACAGA
GGCCACAAGCTGCACACGACGCGTTCGTGGCAATTCCTCGGCCTCGCCGGCGTCGGCGGC
GCCCCCACCGGCGCCGCCTGGAAGAAGGCCAGGTTCGGCGAGGACACCATCATCGGCAAC
CTCGACACCGGTGTGTGGCCAGAATCAGAGAGCTTCAGGGATGATGGATTGGGGCCTATT
CCATCGTGGTGGAGAGGAGAATGCCAGAAAGGCCAAGATGATGCATTCTCTTGCAACAGG
AAGCTGATCGGTGCGCGCTTCTTCAACAAGGGGTACGCGTCGGCGGTGGGCAACCTCAAC
ACCTCCCTCTTCGACACGCCGCGCGACACCGACGGCCACGGCACGCACACGCTCTCCACG
GCGGGCGGCGCGCCGGTGGCCGGCGCCAGCGTCTTCGGCTACGGCAACGGCACGGCGAGC
GGCGGCTCGCCGATGGCGCGCGTGGCTGCGTACCGCGTCTGCTACACCCCCGTCAACGGC
AGCGAGTGCTTCGACGCCGACATCCTCGCCGCGTTCGACGCCGCCATCCACGACGGCGTC
CACGTCCTCTCCGTCTCCCTCGGCGGCGACGCGGGCGACTACTTCGCCGACGGCCTCGCC
ATCGGCTCCTTCCACGCCGTCCGCCACGGCATCGCCGTTGTCTGCTCCGCCGGCAACTCG
GGCCCCGCCCCCGGCACCGTCTCCAACGTCGCGCCGTGGCTCTTCACCGCCGCCGCGAGC
ACCATGGACCGCGAGTTCCCTGCCTACGTCGTCTTCAACGACACCAAGCTCAAGGGCCAG
AGCCTCTCCGCCTCCGCCCTCTCGCCGGCGTCGAGCTCCTTCCCCATGATCGACTCCTCC
CTAGCTGCCTCTCCCAACCGGACTCAAAACGAATCGCAGCTTTGTTTCCTGGGATCGCTT
GATCCGGAGAAGGTGAAGGGGAAGATCGTGGTGTGCTTGAGAGGAGTGAACCCGAGGGTG
GAGAAGGGCGAGGCGGTGCTGGAAGCCGGCGGCGCCGGGATGGTGCTCGCCAACGACGTC
ACCACCGGCAACGAGATCATCGCTGACGCCCATGTCCTCCCCGCCACCCACATCAAGTTC
AGCGACGGCCAGATCCTCTTCTCCTACCTCAAGAACACCAAGAGTCCGGCGGGGACGATA
ACGAGGCCGGAGACGAGGCTGGGGACGAAGCCGGCGCCTTTCATGGCGGCGTTCTCGTCG
CAGGGGCCGAACACGGTGACGCCGGGGATCCTGAAGCCGGACATCACGGCGCCCGGGGTG
AGCGTGGTGGCGGCGTGGACGCGAGCCAGCGCGCCGACGGACCTCGCCTTCGACAAGCGC
CGCGTCGCCTTCAACTCCGAGTTCGGGACGTCCATGTGCGTACCCGCACGTCACCGGCGT
CGTCGGCGTGCTCCGCACGCTGCGCCCCGACTGGAGCCCCGCGGCGACTCGCTCCGCGCT
CATGACCACCGCCGTCGAGGTGGACAACGAGCGGCACGCCATCCTCAACTCCTCCTTCGC
CGCCGCCAACCCGGTTCGGGTGTCGGCGCCGGCCACGTCTCCCCGGCCCGCGCCATGAAC
CCGGGCCTCGTCTACGACCTCGCCGCCGTCGACTACCTCAACTTCCTCTGCTCCCTCAGC
TACAACGCCACCGTCATGGCCATGTTCGCCGGCGGCGGCGGCGCGGCGCCGTTCCGGTGC
CCGGCCTCGCCGCCCAAGGTGCAGGACCTCAACTACCCGTCCATCACCGTCGTCAACCTC
ACCTCGTCGGCCACCGTCCGGCGCACGGTGAAGAACGTCGGCAAGCCGGGGGTCTACAAG
GCGTACGTGACCTCGCCGGCCGGCGTGCGCGTCACGGTGAGCCCGGACACGCTGCCGTTC
TTGCTCAAGGGGGAGAAGAAGACGTTCCAGGTGAGGTTCGAGGTGACGAACGCGTCGCTC
GCCATGGATTACTCCTTCGGCGCGCTCGTCTGGACCAACGGCAAGCAGTTCGTCAGGTCG
CCTCTCGTGGTGAAGACGACGACGCCGACGATGGCATGATCGTGATTAATAATTATTAAT
TATATATAGGGTATTGGTTGATTAATTATTAATCGATTTAATTAGGTTTAGGAGGGGTGG
TGGTGTGTAAAGAAGCAGACATAATTAAACGTTTGTTTGAATTCTTTAGCTTCAGAAAAT
CTAAATGTTTCATGTGCATTTGCTCGGAAAGTCATGGAAAATTCTGAAAAAAGAAAAGAA
AATCAATAATAATACCCGTTACAGTAGAAAAAAAA

consensusID : consensus_4005#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1389
fasta sequence

                              [GAGATGCAGGCAGCTTTGTTTCCTGGGATCGCTTGATCCGGAGAAGGTGAAGGGGAAGATCGTGGTGTGCTTGAGAGGAGTGAACCCGAGGGTGGAGAAGGGCGAGGCGGTGCTGGAAGCCGGCGGCGCCGGGATGGTGCTCGCCAACGACGTCACCACCGGCAACGAGATCATCGCTGACGCCCATGTCCTCCCCGCCACCCACATCAAGTTCAGCGACGGCCAGATCCTCTTCTCCTACCTCAAGAACACCAAGTAATCAAGCAGCCGAAAACATTGTGCTCGCCGTTGATCGATTTGCTCGCCGGCGTCGCTGATGTGTGGGTTGTGTTTTAGGAGTCCGGCGGGGACGATAACGAGGCCGGAGACGAGGCTGGGGACGAAGCCGGCGCCTTTCATGGCGGCGTTCTCGTCGCAGGGGCCGAACACGGTGACGCCGGGGATCCTGAAGCCGGACATCACGGCGCCCGGGGTGAGCGTGGTGGCGGCGTGGACGCGAGCCAGCGCGCCGACGGACCTCGCCTTCGACAAGCGCCGCGTCGCCTTCAACTCCGAGTCCGGGACGTCCATGTCGTGCCCGCACGTCGCCGGCGTCGTCGGCCTGCTCCGCACGCTGCGCCCCGACTGGAGCCCCGCGGCGATCCGCTCCGCGCTCATGACCACCGCCGTCGAGGTGGACAACGAGCGGCACGCCATCCTCAACTCCTCCTTCGCCGCCGCCAACCCGTTCGGCTTCGGCGCCGGCCACGTCTCCCCGGCCCGCGCCATGAACCCGGGCCTCGTCTACGACCTCGCCGCCGTCGACTACCTCAACTTCCTCTGCTCCCTCAGCTACAACGCCACCGTCATGGCCATGTTCGCCGGCGGCGGCGGCGCGGCGCCGTTCCGGTGCCCGGCCTCGCCGCCCAAGGTGCAGGACCTCAACTACCCGTCCATCACCGTCGTCAACCTCACCTCGTCGGCCACCGTCCGGCGCACGGTGAAGAACGTCGGCAAGCCGGGGGTCTACAAGGCGTACGTGACCTCGCCGGCCGGCGTGCGCGTCACGGTGAGCCCGGACACGCTGCCGTTCTTGCTCAAGGGGGAGAAGAAGACGTTCCAGGTGAGGTTCGAGGTGACGAACGCGTCGCTCGCCATGGATTACTCCTTCGGCGCGCTCGTCTGGACCAACGGCAAGCAGTTCGTCAGGTCGCCTCTCGTGGTGAAGACGACGACGCCGACGATGGCATGATCGTGATTAATAATTATTAATTATATATAGGGTATTGGTTGATTAATTATTAATCGATTTAATTAGGTTTAGGAGGGGTGGTGGTGTGTAAAGAAGCAGACATAATTAAACGTTTGTTTGAATTCTTTAGCTTCAGAAAATCTAAATGTTTCATGTGC]

[+] EMBL AK106394             [GAGATGCAGGCAGCTTTGTTTCCTGGGATCGCTTGATCCGGAGAAGGTGAAGGGGAAGATCGTGGTGTGCTTGAGAGGAGTGAACCCGAGGGTGGAGAAGGGCGAGGCGGTGCTGGAAGCCGGCGGCGCCGGGATGGTGCTCGCCAACGACGTCACCACCGGCAACGAGATCATCGCTGACGCCCATGTCCTCCCCGCCACCCACATCAAGTTCAGCGACGGCCAGATCCTCTTCTCCTACCTCAAGAACACCAAGTAATCAAGCAGCCGAAAACATTGTGCTCGCCGTTGATCGATTTGCTCGCCGGCGTCGCTGATGTGTGGGTTGTGTTTTAGGAGTCCGGCGGGGACGATAACGAGGCCGGAGACGAGGCTGGGGACGAAGCCGGCGCCTTTCATGGCGGCGTTCTCGTCGCAGGGGCCGAACACGGTGACGCCGGGGATCCTGAAGCCGGACATCACGGCGCCCGGGGTGAGCGTGGTGGCGGCGTGGACGCGAGCCAGCGCGCCGACGGACCTCGCCTTCGACAAGCGCCGCGTCGCCTTCAACTCCGAGTCCGGGACGTCCATGTCGTGCCCGCACGTCGCCGGCGTCGTCGGCCTGCTCCGCACGCTGCGCCCCGACTGGAGCCCCGCGGCGATCCGCTCCGCGCTCATGACCACCGCCGTCGAGGTGGACAACGAGCGGCACGCCATCCTCAACTCCTCCTTCGCCGCCGCCAACCCGTTCGGCTTCGGCGCCGGCCACGTCTCCCCGGCCCGCGCCATGAACCCGGGCCTCGTCTACGACCTCGCCGCCGTCGACTACCTCAACTTCCTCTGCTCCCTCAGCTACAACGCCACCGTCATGGCCATGTTCGCCGGCGGCGGCGGCGCGGCGCCGTTCCGGTGCCCGGCCTCGCCGCCCAAGGTGCAGGACCTCAACTACCCGTCCATCACCGTCGTCAACCTCACCTCGTCGGCCACCGTCCGGCGCACGGTGAAGAACGTCGGCAAGCCGGGGGTCTACAAGGCGTACGTGACCTCGCCGGCCGGCGTGCGCGTCACGGTGAGCCCGGACACGCTGCCGTTCTTGCTCAAGGGGGAGAAGAAGACGTTCCAGGTGAGGTTCGAGGTGACGAACGCGTCGCTCGCCATGGATTACTCCTTCGGCGCGCTCGTCTGGACCAACGGCAAGCAGTTCGTCAGGTCGCCTCTCGTGGTGAAGACGACGACGCCGACGATGGCATGATCGTGATTAATAATTATTAATTATATATAGGGTATTGGTTGATTAATTATTAATCGATTTAATTAGGTTTAGGAGGGGTGGTGGTGTGTAAAGAAGCAGACATAATTAAACGTTTGTTTGAATTCTTTAGCTTCAGAAAATCTAAATGTTTCATGTGC]




>consensus_4005#1
GAGATGCAGGCAGCTTTGTTTCCTGGGATCGCTTGATCCGGAGAAGGTGAAGGGGAAGAT
CGTGGTGTGCTTGAGAGGAGTGAACCCGAGGGTGGAGAAGGGCGAGGCGGTGCTGGAAGC
CGGCGGCGCCGGGATGGTGCTCGCCAACGACGTCACCACCGGCAACGAGATCATCGCTGA
CGCCCATGTCCTCCCCGCCACCCACATCAAGTTCAGCGACGGCCAGATCCTCTTCTCCTA
CCTCAAGAACACCAAGTAATCAAGCAGCCGAAAACATTGTGCTCGCCGTTGATCGATTTG
CTCGCCGGCGTCGCTGATGTGTGGGTTGTGTTTTAGGAGTCCGGCGGGGACGATAACGAG
GCCGGAGACGAGGCTGGGGACGAAGCCGGCGCCTTTCATGGCGGCGTTCTCGTCGCAGGG
GCCGAACACGGTGACGCCGGGGATCCTGAAGCCGGACATCACGGCGCCCGGGGTGAGCGT
GGTGGCGGCGTGGACGCGAGCCAGCGCGCCGACGGACCTCGCCTTCGACAAGCGCCGCGT
CGCCTTCAACTCCGAGTCCGGGACGTCCATGTCGTGCCCGCACGTCGCCGGCGTCGTCGG
CCTGCTCCGCACGCTGCGCCCCGACTGGAGCCCCGCGGCGATCCGCTCCGCGCTCATGAC
CACCGCCGTCGAGGTGGACAACGAGCGGCACGCCATCCTCAACTCCTCCTTCGCCGCCGC
CAACCCGTTCGGCTTCGGCGCCGGCCACGTCTCCCCGGCCCGCGCCATGAACCCGGGCCT
CGTCTACGACCTCGCCGCCGTCGACTACCTCAACTTCCTCTGCTCCCTCAGCTACAACGC
CACCGTCATGGCCATGTTCGCCGGCGGCGGCGGCGCGGCGCCGTTCCGGTGCCCGGCCTC
GCCGCCCAAGGTGCAGGACCTCAACTACCCGTCCATCACCGTCGTCAACCTCACCTCGTC
GGCCACCGTCCGGCGCACGGTGAAGAACGTCGGCAAGCCGGGGGTCTACAAGGCGTACGT
GACCTCGCCGGCCGGCGTGCGCGTCACGGTGAGCCCGGACACGCTGCCGTTCTTGCTCAA
GGGGGAGAAGAAGACGTTCCAGGTGAGGTTCGAGGTGACGAACGCGTCGCTCGCCATGGA
TTACTCCTTCGGCGCGCTCGTCTGGACCAACGGCAAGCAGTTCGTCAGGTCGCCTCTCGT
GGTGAAGACGACGACGCCGACGATGGCATGATCGTGATTAATAATTATTAATTATATATA
GGGTATTGGTTGATTAATTATTAATCGATTTAATTAGGTTTAGGAGGGGTGGTGGTGTGT
AAAGAAGCAGACATAATTAAACGTTTGTTTGAATTCTTTAGCTTCAGAAAATCTAAATGT
TTCATGTGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4005#0      CTCCCATCCTCTCCACCTCAATCCCTCTCGCCGCCATGGCCGCCGCCGCCATTGTTGTCT 60
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      TGCTCGTCTGCTCGCTGCCGTCTCTGCTCGTCTGCTCGCTGCCGTCTCTGCTCGTCGGCG 120
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      CCGCTGCTGCGGGCGGGCGGGGAGAAGCAGTCGTACGTCGTGTATCTTGGAGAGCACGCC 180
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      CATGGCGAGCGGCTGGGCGCCGCCGCCGCCGCTGACGTCGACGTCGAGGCGCTCGCGCGG 240
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      CAGGCGGAGGATTCGCACTGCGAGCTCCTCGCCGGCGTCCTCGGAGACAAGGAGAAGGCG 300
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      CGGGAGGCCATCTTCTACTCGCACACGCGCCACATCAACGGCTTCGCGGCCAACCTCGAC 360
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      GCCGCCGCCGCCGCCAAGATCGCCGAGAAGCCGGGCGTCGTGTCGGTGTTCCCGAACAGA 420
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      GGCCACAAGCTGCACACGACGCGTTCGTGGCAATTCCTCGGCCTCGCCGGCGTCGGCGGC 480
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      GCCCCCACCGGCGCCGCCTGGAAGAAGGCCAGGTTCGGCGAGGACACCATCATCGGCAAC 540
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      CTCGACACCGGTGTGTGGCCAGAATCAGAGAGCTTCAGGGATGATGGATTGGGGCCTATT 600
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      CCATCGTGGTGGAGAGGAGAATGCCAGAAAGGCCAAGATGATGCATTCTCTTGCAACAGG 660
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      AAGCTGATCGGTGCGCGCTTCTTCAACAAGGGGTACGCGTCGGCGGTGGGCAACCTCAAC 720
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      ACCTCCCTCTTCGACACGCCGCGCGACACCGACGGCCACGGCACGCACACGCTCTCCACG 780
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      GCGGGCGGCGCGCCGGTGGCCGGCGCCAGCGTCTTCGGCTACGGCAACGGCACGGCGAGC 840
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      GGCGGCTCGCCGATGGCGCGCGTGGCTGCGTACCGCGTCTGCTACACCCCCGTCAACGGC 900
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      AGCGAGTGCTTCGACGCCGACATCCTCGCCGCGTTCGACGCCGCCATCCACGACGGCGTC 960
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      CACGTCCTCTCCGTCTCCCTCGGCGGCGACGCGGGCGACTACTTCGCCGACGGCCTCGCC 1020
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      ATCGGCTCCTTCCACGCCGTCCGCCACGGCATCGCCGTTGTCTGCTCCGCCGGCAACTCG 1080
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      GGCCCCGCCCCCGGCACCGTCTCCAACGTCGCGCCGTGGCTCTTCACCGCCGCCGCGAGC 1140
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      ACCATGGACCGCGAGTTCCCTGCCTACGTCGTCTTCAACGACACCAAGCTCAAGGGCCAG 1200
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      AGCCTCTCCGCCTCCGCCCTCTCGCCGGCGTCGAGCTCCTTCCCCATGATCGACTCCTCC 1260
consensus_4005#1      ------------------------------------------------------------
                                                                                  

consensus_4005#0      CTAGCTGCCTCTCCCAACCGGACTCAAAACGAATCGCAGCTTTGTTTCCTGGGATCGCTT 1320
consensus_4005#1      -------------------------GAGATGCAG-GCAGCTTTGTTTCCTGGGATCGCTT 34
                                                * * * *  *************************

consensus_4005#0      GATCCGGAGAAGGTGAAGGGGAAGATCGTGGTGTGCTTGAGAGGAGTGAACCCGAGGGTG 1380
consensus_4005#1      GATCCGGAGAAGGTGAAGGGGAAGATCGTGGTGTGCTTGAGAGGAGTGAACCCGAGGGTG 94
                      ************************************************************

consensus_4005#0      GAGAAGGGCGAGGCGGTGCTGGAAGCCGGCGGCGCCGGGATGGTGCTCGCCAACGACGTC 1440
consensus_4005#1      GAGAAGGGCGAGGCGGTGCTGGAAGCCGGCGGCGCCGGGATGGTGCTCGCCAACGACGTC 154
                      ************************************************************

consensus_4005#0      ACCACCGGCAACGAGATCATCGCTGACGCCCATGTCCTCCCCGCCACCCACATCAAGTTC 1500
consensus_4005#1      ACCACCGGCAACGAGATCATCGCTGACGCCCATGTCCTCCCCGCCACCCACATCAAGTTC 214
                      ************************************************************

consensus_4005#0      AGCGACGGCCAGATCCTCTTCTCCTACCTCAAGAACACCAAG------------------ 1542
consensus_4005#1      AGCGACGGCCAGATCCTCTTCTCCTACCTCAAGAACACCAAGTAATCAAGCAGCCGAAAA 274
                      ******************************************                  

consensus_4005#0      ------------------------------------------------------------
consensus_4005#1      CATTGTGCTCGCCGTTGATCGATTTGCTCGCCGGCGTCGCTGATGTGTGGGTTGTGTTTT 334
                                                                                  

consensus_4005#0      ---AGTCCGGCGGGGACGATAACGAGGCCGGAGACGAGGCTGGGGACGAAGCCGGCGCCT 1599
consensus_4005#1      AGGAGTCCGGCGGGGACGATAACGAGGCCGGAGACGAGGCTGGGGACGAAGCCGGCGCCT 394
                         *********************************************************

consensus_4005#0      TTCATGGCGGCGTTCTCGTCGCAGGGGCCGAACACGGTGACGCCGGGGATCCTGAAGCCG 1659
consensus_4005#1      TTCATGGCGGCGTTCTCGTCGCAGGGGCCGAACACGGTGACGCCGGGGATCCTGAAGCCG 454
                      ************************************************************

consensus_4005#0      GACATCACGGCGCCCGGGGTGAGCGTGGTGGCGGCGTGGACGCGAGCCAGCGCGCCGACG 1719
consensus_4005#1      GACATCACGGCGCCCGGGGTGAGCGTGGTGGCGGCGTGGACGCGAGCCAGCGCGCCGACG 514
                      ************************************************************

consensus_4005#0      GACCTCGCCTTCGACAAGCGCCGCGTCGCCTTCAACTCCGAGTTCGGGACGTCCATGTGC 1779
consensus_4005#1      GACCTCGCCTTCGACAAGCGCCGCGTCGCCTTCAACTCCGAGTCCGGGACGTCCATGT-C 573
                      ******************************************* ************** *

consensus_4005#0      GTACCCGCACGTCACCGGCGTCGTCGGCGTGCTCCGCACGCTGCGCCCCGACTGGAGCCC 1839
consensus_4005#1      GTGCCCGCACGTCGCCGGCGTCGTCGGCCTGCTCCGCACGCTGCGCCCCGACTGGAGCCC 633
                      ** ********** ************** *******************************

consensus_4005#0      CGCGGCGACTCGCTCCGCGCTCATGACCACCGCCGTCGAGGTGGACAACGAGCGGCACGC 1899
consensus_4005#1      CGCGGCGATCCGCTCCGCGCTCATGACCACCGCCGTCGAGGTGGACAACGAGCGGCACGC 693
                      ********  **************************************************

consensus_4005#0      CATCCTCAACTCCTCCTTCGCCGCCGCCAACCCGGTTCGGGTGTCGGCGCCGGCCACGTC 1959
consensus_4005#1      CATCCTCAACTCCTCCTTCGCCGCCGCCAACCCG-TTCGGCT-TCGGCGCCGGCCACGTC 751
                      ********************************** ***** * *****************

consensus_4005#0      TCCCCGGCCCGCGCCATGAACCCGGGCCTCGTCTACGACCTCGCCGCCGTCGACTACCTC 2019
consensus_4005#1      TCCCCGGCCCGCGCCATGAACCCGGGCCTCGTCTACGACCTCGCCGCCGTCGACTACCTC 811
                      ************************************************************

consensus_4005#0      AACTTCCTCTGCTCCCTCAGCTACAACGCCACCGTCATGGCCATGTTCGCCGGCGGCGGC 2079
consensus_4005#1      AACTTCCTCTGCTCCCTCAGCTACAACGCCACCGTCATGGCCATGTTCGCCGGCGGCGGC 871
                      ************************************************************

consensus_4005#0      GGCGCGGCGCCGTTCCGGTGCCCGGCCTCGCCGCCCAAGGTGCAGGACCTCAACTACCCG 2139
consensus_4005#1      GGCGCGGCGCCGTTCCGGTGCCCGGCCTCGCCGCCCAAGGTGCAGGACCTCAACTACCCG 931
                      ************************************************************

consensus_4005#0      TCCATCACCGTCGTCAACCTCACCTCGTCGGCCACCGTCCGGCGCACGGTGAAGAACGTC 2199
consensus_4005#1      TCCATCACCGTCGTCAACCTCACCTCGTCGGCCACCGTCCGGCGCACGGTGAAGAACGTC 991
                      ************************************************************

consensus_4005#0      GGCAAGCCGGGGGTCTACAAGGCGTACGTGACCTCGCCGGCCGGCGTGCGCGTCACGGTG 2259
consensus_4005#1      GGCAAGCCGGGGGTCTACAAGGCGTACGTGACCTCGCCGGCCGGCGTGCGCGTCACGGTG 1051
                      ************************************************************

consensus_4005#0      AGCCCGGACACGCTGCCGTTCTTGCTCAAGGGGGAGAAGAAGACGTTCCAGGTGAGGTTC 2319
consensus_4005#1      AGCCCGGACACGCTGCCGTTCTTGCTCAAGGGGGAGAAGAAGACGTTCCAGGTGAGGTTC 1111
                      ************************************************************

consensus_4005#0      GAGGTGACGAACGCGTCGCTCGCCATGGATTACTCCTTCGGCGCGCTCGTCTGGACCAAC 2379
consensus_4005#1      GAGGTGACGAACGCGTCGCTCGCCATGGATTACTCCTTCGGCGCGCTCGTCTGGACCAAC 1171
                      ************************************************************

consensus_4005#0      GGCAAGCAGTTCGTCAGGTCGCCTCTCGTGGTGAAGACGACGACGCCGACGATGGCATGA 2439
consensus_4005#1      GGCAAGCAGTTCGTCAGGTCGCCTCTCGTGGTGAAGACGACGACGCCGACGATGGCATGA 1231
                      ************************************************************

consensus_4005#0      TCGTGATTAATAATTATTAATTATATATAGGGTATTGGTTGATTAATTATTAATCGATTT 2499
consensus_4005#1      TCGTGATTAATAATTATTAATTATATATAGGGTATTGGTTGATTAATTATTAATCGATTT 1291
                      ************************************************************

consensus_4005#0      AATTAGGTTTAGGAGGGGTGGTGGTGTGTAAAGAAGCAGACATAATTAAACGTTTGTTTG 2559
consensus_4005#1      AATTAGGTTTAGGAGGGGTGGTGGTGTGTAAAGAAGCAGACATAATTAAACGTTTGTTTG 1351
                      ************************************************************

consensus_4005#0      AATTCTTTAGCTTCAGAAAATCTAAATGTTTCATGTGCATTTGCTCGGAAAGTCATGGAA 2619
consensus_4005#1      AATTCTTTAGCTTCAGAAAATCTAAATGTTTCATGTGC---------------------- 1389
                      **************************************                      

consensus_4005#0      AATTCTGAAAAAAGAAAAGAAAATCAATAATAATACCCGTTACAGTAGAAAAAAAA 2675
consensus_4005#1      --------------------------------------------------------