|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4014#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 4293 fasta sequence
[CGCGCCGCGCCATCATCGCTGCCGCCCACGATTCGCCACCGTCCCCGCACCACGCCGCCGCCCCTCGCCTCTCCACCGCGCCGCCCCCTCCACCAGCAGCCGTCCCTCACAAATCGTCACCGCCGTCATCAGCGCCGCCTCGCCGATCTCCTCTGCGCCGCCGCCCACGATTCGCCGCCGTCCCCACACCGCGCCGCCGCCGTCCACGATTAGCCGCCTCTCCACCGCGCCGCCGCCCCTCCACCAGCAGCCGTCCCTGACAAATCGTCGCCGCCGTCCCCACACCGCGCCGGCGCCCCTCGCCTCTCCACCGCGCCGCCGCCGTCCCCACTGCGCCGCATCGGCCTCCAAGTCTCCGCCGACTCCACCGAGCACGACGAGCTCAACACGAAGAGCTCCAAGAGAGGCCCCTCTCCTTCCTGCTCGGGTCGGCCGGATCTAGGAGGAGCAGAGGCTTCACCGTGGGCTTGGTAGGGATACCGGTGAGCTCTCCCCCGTGACTCCTGCCTCCTCTGGTACAGCGAAATCAGTTCTTCCTCCTCTAGGGCTTAGCTTGTTCCTTCTATTCTGATTACATGATTAGGTTAGGGCGAATTTTGTGAGGGCTTTGCTGTCTAAGATTATGCGAGTAACCAAGAACCGATGGTGATTCAAAATAAGAAAAACGATGGATGCTTTGTTTTTTTTATCTTCGACTTGGGGACTTGGGGTTGCTATTACTCGTGAGCTTGCCCTAAAATAATTGAATTCAACTAATCTACACTTTAGAGCATCTCAAATATCATGTCTTTTGTCAATCCAAATAGCACATATACTGCAATGGTTGAGAACAAATTGGATGGTGCTGGTATAATTTAAATGTTTAGAAAAAAAAAAGTAATGCAGTAAACACAATGATTCATGGAATAAAATCAACAAATGGCGACGATCGCCATCTCTGAATCAATGGTAGTTTACCCCTGCTATGGATATATTTCCTGTATAGAAAATGGTTTATTGGATAATGTATTGGATGTCATATTGCCAATTCTCCATTGATTTTATAGTAATTAGAACTTCACATAAAAATGCTGATGTCATGCAATTTCAATTTTGTATACAACTAGCAAATTGCCTCGAATATCATTGGAGTAGTGGGTATGGTGGCACTGATTGCATTGATGGTCTCTTGAAGACTTTCTTTTTTCATCACTTAGCTGTCCATGTTCATTGATATTTTTTTTTGGCAGTAGTAATCATATTAAGACTATAGTGCAGTTTCCAGTTAATCAGAAGCAATCAATTGAGGGAAATTGAGACTCCCAAGACTTCCATTTTCAGTCAATCAAAAGGTTATTTTTTGTTCTCATTGACAATTTCTAACTCAAATTCTGGACAGTCCAGCACGACCTCGGCCAAGAAGGCAGCAGGTCTACGCCACCTTCTTCCCGTGCTGATGCCGTGTCTGAGCCCTACCTCACCACAAGTACTGCTCCATTTCTCTTTTTGAATCACCACCGGTTCTTGATTTCTTTGTGATCTAAATATTAAAGATGTTTATTCCATTGATTAAAGATGCTTGCCATTAGGAAATATATATATATTAGCTGCACGTTGTGTAGAACTCAAGAATGCTTAGAGGCACTCCATGCATGGGTTGTTTTAGCTGCACATGTACTGTCCGGCTGTTCAAATTTGAGCTATTTTCCAGTTAATTATTTAATTAACTCTTAATTATCTGATTCCTCAAATATTTTCCAATATAGTTATTCCTTCAACAAAATAATTGACATATCAGTTACTTCTTGCGGGTAACAAACCCACCGCCGGAGAGCACCTTTTGTTTTCTTATTTTCTTATTTGTCTGCCCTATCAAGTAGCACGCCATTTCAATACTCTTTATTCTTCCAGCAGTGCACATTATTGTGCCATTTCATATGTTAGCTCTAAATTCACATGTGTTAGCTCTAAATTGACATTATTATACAACTTCCAGCAGTATATGTCTTGCTCTGAATTTGCATGTGTTAGCTCTAAATTTAAGATGCTTGATATAGATTGTCCTTATGATGCTAGCTGCAATGACCCCATTATTTCAATGTAAAGGGGGGGGGGGGGGCACTTTACTATTATTGTTTTTTGATGTATTTAAGACGATCAAATCCTGTGCACTGAATGTTAGGGTCATTCAGTATTATTCTTTATCTTGGTGATAATCTGAAATTCCGAACTGTGATCTTCTCCCAAACAATATGCTTACATGTTCCCTCACTTTCATTTGGCACTATGCTTAAATTATTATATCGTCTCAAACATGATCTAATAAATCATTGCATTTAGCATTCGATCAGAATGAAAGTTCTTGATTAACTTGCATGTTTGATCGATGAAGCCAACAAGCTGGTGAACAATTTGATCCTTCGTCAAATTGATGCGAGGGCCCAACCAATAAACCCACTAAAGCTAACTCTCCGATTGTGTAAGAGACTTACAAAGAAACTTATGGAGCGTATGTGTTCCCAGTAAACACCATAAACTTATGGAGCGTATGCGAGGGCCACAGCTTACAGCACCCCCACCACATTAGGATTATCACCATTGAAAACACAATCATTATGGTGTTTCCAAATCTCCTAGGCTACTAAAATAATCAAAGAATTCAATCTCATCCATACCCCTTTTGGAGCAACCTTAGTGACTTTGCTCCACCATCCTAAAAACATGTTGTAGAAGACTAAGGTGCAGCCAAAACCAAACCCAATTTTGTGAAGATTAAAGTCCATACTTGTCGGATCATGTACTTTTTGCTGGCTTGAGTTACCAGATTGATATCCATCTGGAGGCAATCCACATGATTGGGAGGATTCTTGTCTTATCTAATCTTTGGTTTGGTCCTGAAAACCAACTATTTATAAGGAATTCTTGAAGAAATTTCTGACAAATCTTTCAGAAGTAAGAATTGCTACAATTAATGCAGAAAAAATCTGTTACATGGCTGTGTCTTCTGGTAGTGAAACGAAAGGTATTATTAGCAAGACTGCTACTTTTATCTGTTCTTTTATTCAGAGTTTTGTATTACCATCTTTTTCACACTAATATTTGGTTTTATTTGGCATCATCACTTAAGGGGATGTTGTTTGATTTTGATGACAAAATTAGGATCCAAGCTATTTCTGCGATTTAGCCTAATCAAATTTAAGACCATGCCTTTCTGAGTTGATATTTCAAGCAGCAGACATGCTATGCGATAAAGGTCAGCACATTGCTATTTTTCATTGCTGAAGGTTCTATAAGGTGCTTCGTGTAAATTTACGCCATGAATTTGAATTCTGATTGGACATTGGTAAAGTTTTCCATGACTAAATTCTTATGCATTTACCTTACAAATATGGATCTGCTCTCCAATTGACCACCCTTATATTTTGCATCTTTATGCATTTACTGTACAAATATGGATCTGCCCTCCAATTGACCACTCCTTTACATTTTGCATCTTACTGCATTTACTGTATAAATACGGATATTGGTAAATCCTGTGATGGCTATGAATTGCTTGGTATCTGAAAGTAACCAGTTGATGCCAATGGGTCTACGTGCATATTTCATGATTTTAAGATTGCTAACGTGATGAAGAATTCCAAAATGGAGTTTTACCTGTGATGGCTCTGAATTGCTTGGTATCTGAAAGTAACCAGTTGATGCCAATGGGTCTACGTGCATATTTCATGATTTTAAGATTGCTAACGTGATGAAGAATTCCAAAATGGAGGTTGAACCTTCTGAGTTAATGGCTTCTTAGACAAAGCCAACTGATGTGTGAACTAAATTGAGTTTAGAACTGACTTTTATTTGAGTCGAACTATACTTCAAATAATATATTTTGTGTTAGTACCTCTGGATAGATATCGATATTTAAGAAAGTCATTTTCCATAATTCCCCTAATATTTTAGACAGAACAGTAGGCTCAGACTGCATACTATTTTCCAGAATTTTGCATTTTGATTCAGCAGATTCTTTTGTGCATTTTAGTTTTCTATGGGCTCGATTCTCTTGCAGCTAGACTTGGTCAACTAACAAATTTGCAGGCTTACATGCATGTTTAGAAAACTGAGAGAATATCGGGCACATTAGCAATTCCTGATAAGAGAAGCTTAGAATCTTTCATGGGGAGTGAGGATTTGAATTCTTAGTTTTTACCTCAATTGACAATAGAAAGATTTGTAACCAGGATATATATCATGAATTAGCGATGTTTCCTTTGTATGGACCTATGTGTAATTGATGATTTTAAAAAATACAACACTTGTGATGTT]
[+] EMBL AK120368 [CGCGCCGCGCCATCATCGCTGCCGCCCACGATTCGCCACCGTCCCCGCACCACGCCGCCGCCCCTCGCCTCTCCACCGCGCCGCCCCCTCCACCAGCAGCCGTCCCTCACAAATCGTCACCGCCGTCATCAGCGCCGCCTCGCCGATCTCCTCTGCGCCGCCGCCCACGATTCGCCGCCGTCCCCACACCGCGCCGCCGCCGTCCACGATTAGCCGCCTCTCCACCGCGCCGCCGCCCCTCCACCAGCAGCCGTCCCTGACAAATCGTCGCCGCCGTCCCCACACCGCGCCGGCGCCCCTCGCCTCTCCACCGCGCCGCCGCCGTCCCCACTGCGCCGCATCGGCCTCCAAGTCTCCGCCGACTCCACCGAGCACGACGAGCTCAACACGAAGAGCTCCAAGAGAGGCCCCTCTCCTTCCTGCTCGGGTCGGCCGGATCTAGGAGGAGCAGAGGCTTCACCGTGGGCTTGGTAGGGATACCGGTGAGCTCTCCCCCGTGACTCCTGCCTCCTCTGGTACAGCGAAATCAGTTCTTCCTCCTCTAGGGCTTAGCTTGTTCCTTCTATTCTGATTACATGATTAGGTTAGGGCGAATTTTGTGAGGGCTTTGCTGTCTAAGATTATGCGAGTAACCAAGAACCGATGGTGATTCAAAATAAGAAAAACGATGGATGCTTTGTTTTTTTTATCTTCGACTTGGGGACTTGGGGTTGCTATTACTCGTGAGCTTGCCCTAAAATAATTGAATTCAACTAATCTACACTTTAGAGCATCTCAAATATCATGTCTTTTGTCAATCCAAATAGCACATATACTGCAATGGTTGAGAACAAATTGGATGGTGCTGGTATAATTTAAATGTTTAGAAAAAAAAAAGTAATGCAGTAAACACAATGATTCATGGAATAAAATCAACAAATGGCGACGATCGCCATCTCTGAATCAATGGTAGTTTACCCCTGCTATGGATATATTTCCTGTATAGAAAATGGTTTATTGGATAATGTATTGGATGTCATATTGCCAATTCTCCATTGATTTTATAGTAATTAGAACTTCACATAAAAATGCTGATGTCATGCAATTTCAATTTTGTATACAACTAGCAAATTGCCTCGAATATCATTGGAGTAGTGGGTATGGTGGCACTGATTGCATTGATGGTCTCTTGAAGACTTTCTTTTTTCATCACTTAGCTGTCCATGTTCATTGATATTTTTTTTTGGCAGTAGTAATCATATTAAGACTATAGTGCAGTTTCCAGTTAATCAGAAGCAATCAATTGAGGGAAATTGAGACTCCCAAGACTTCCATTTTCAGTCAATCAAAAGGTTATTTTTTGTTCTCATTGACAATTTCTAACTCAAATTCTGGACAGTCCAGCACGACCTCGGCCAAGAAGGCAGCAGGTCTACGCCACCTTCTTCCCGTGCTGATGCCGTGTCTGAGCCCTACCTCACCACAAGTACTGCTCCATTTCTCTTTTTGAATCACCACCGGTTCTTGATTTCTTTGTGATCTAAATATTAAAGATGTTTATTCCATTGATTAAAGATGCTTGCCATTAGGAAATATATATATATTAGCTGCACGTTGTGTAGAACTCAAGAATGCTTAGAGGCACTCCATGCATGGGTTGTTTTAGCTGCACATGTACTGTCCGGCTGTTCAAATTTGAGCTATTTTCCAGTTAATTATTTAATTAACTCTTAATTATCTGATTCCTCAAATATTTTCCAATATAGTTATTCCTTCAACAAAATAATTGACATATCAGTTACTTCTTGCGGGTAACAAACCCACCGCCGGAGAGCACCTTTTGTTTTCTTATTTTCTTATTTGTCTGCCCTATCAAGTAGCACGCCATTTCAATACTCTTTATTCTTCCAGCAGTGCACATTATTGTGCCATTTCATATGTTAGCTCTAAATTCACATGTGTTAGCTCTAAATTGACATTATTATACAACTTCCAGCAGTATATGTCTTGCTCTGAATTTGCATGTGTTAGCTCTAAATTTAAGATGCTTGATATAGATTGTCCTTATGATGCTAGCTGCAATGACCCCATTATTTCAATGTAAAGGGGGGGGGGGGGGCACTTTACTATTATTGTTTTTTGATGTATTTAAGACGATCAAATCCTGTGCACTGAATGTTAGGGTCATTCAGTATTATTCTTTATCTTGGTGATAATCTGAAATTCCGAACTGTGATCTTCTCCCAAACAATATGCTTACATGTTCCCTCACTTTCATTTGGCACTATGCTTAAATTATTATATCGTCTCAAACATGATCTAATAAATCATTGCATTTAGCATTCGATCAGAATGAAAGTTCTTGATTAACTTGCATGTTTGATCGATGAAGCCAACAAGCTGGTGAACAATTTGATCCTTCGTCAAATTGATGCGAGGGCCCAACCAATAAACCCACTAAAGCTAACTCTCCGATTGTGTAAGAGACTTACAAAGAAACTTATGGAGCGTATGTGTTCCCAGTAAACACCATAAACTTATGGAGCGTATGCGAGGGCCACAGCTTACAGCACCCCCACCACATTAGGATTATCACCATTGAAAACACAATCATTATGGTGTTTCCAAATCTCCTAGGCTACTAAAATAATCAAAGAATTCAATCTCATCCATACCCCTTTTGGAGCAACCTTAGTGACTTTGCTCCACCATCCTAAAAACATGTTGTAGAAGACTAAGGTGCAGCCAAAACCAAACCCAATTTTGTGAAGATTAAAGTCCATACTTGTCGGATCATGTACTTTTTGCTGGCTTGAGTTACCAGATTGATATCCATCTGGAGGCAATCCACATGATTGGGAGGATTCTTGTCTTATCTAATCTTTGGTTTGGTCCTGAAAACCAACTATTTATAAGGAATTCTTGAAGAAATTTCTGACAAATCTTTCAGAAGTAAGAATTGCTACAATTAATGCAGAAAAAATCTGTTACATGGCTGTGTCTTCTGGTAGTGAAACGAAAGGTATTATTAGCAAGACTGCTACTTTTATCTGTTCTTTTATTCAGAGTTTTGTATTACCATCTTTTTCACACTAATATTTGGTTTTATTTGGCATCATCACTTAAGGGGATGTTGTTTGATTTTGATGACAAAATTAGGATCCAAGCTATTTCTGCGATTTAGCCTAATCAAATTTAAGACCATGCCTTTCTGAGTTGATATTTCAAGCAGCAGACATGCTATGCGATAAAGGTCAGCACATTGCTATTTTTCATTGCTGAAGGTTCTATAAGGTGCTTCGTGTAAATTTACGCCATGAATTTGAATTCTGATTGGACATTGGTAAAGTTTTCCATGACTAAATTCTTATGCATTTACCTTACAAATATGGATCTGCTCTCCAATTGACCACCCTTATATTTTGCATCTTTATGCATTTACTGTACAAATATGGATCTGCCCTCCAATTGACCACTCCTTTACATTTTGCATCTTACTGCATTTACTGTATAAATACGGATATTGGTAAATCCTGTGATGGCTATGAATTGCTTGGTATCTGAAAGTAACCAGTTGATGCCAATGGGTCTACGTGCATATTTCATGATTTTAAGATTGCTAACGTGATGAAGAATTCCAAAATGGAGTTTTACCTGTGATGGCTCTGAATTGCTTGGTATCTGAAAGTAACCAGTTGATGCCAATGGGTCTACGTGCATATTTCATGATTTTAAGATTGCTAACGTGATGAAGAATTCCAAAATGGAGGTTGAACCTTCTGAGTTAATGGCTTCTTAGACAAAGCCAACTGATGTGTGAACTAAATTGAGTTTAGAACTGACTTTTATTTGAGTCGAACTATACTTCAAATAATATATTTTGTGTTAGTACCTCTGGATAGATATCGATATTTAAGAAAGTCATTTTCCATAATTCCCCTAATATTTTAGACAGAACAGTAGGCTCAGACTGCATACTATTTTCCAGAATTTTGCATTTTGATTCAGCAGATTCTTTTGTGCATTTTAGTTTTCTATGGGCTCGATTCTCTTGCAGCTAGACTTGGTCAACTAACAAATTTGCAGGCTTACATGCATGTTTAGAAAACTGAGAGAATATCGGGCACATTAGCAATTCCTGATAAGAGAAGCTTAGAATCTTTCATGGGGAGTGAGGATTTGAATTCTTAGTTTTTACCTCAATTGACAATAGAAAGATTTGTAACCAGGATATATATCATGAATTAGCGATGTTTCCTTTGTATGGACCTATGTGTAATTGATGATTTTAAAAAATACAACACTTGTGATGTT]
consensusID : consensus_4014#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1352 fasta sequence
[CTATCATTGCCGGCTCGCCGCTCCCTCGCTCTCCCCGCGCCGCGCCATCATCGCTGCCGCCCACGATTCGCCACCGTCCCCGCACCACGCCGCCGCCCCTCGCCTCTCCACCGCGCCGCCCCTCCACCAGCAGCCGTCCCTCACAAATCGTCACCGCCGTCATCAGCGCCGCCTCGCCGATCTCCTCTGCGCCGCCGCCCACGATTCGCCGCCGTCCCCACACCGCGCCGCCGCCGTCCACGATTAGCCGCCTCTCCACCGCGCCGCCGCCCCTCCACCAGCAGCCGTCCCTGACAAATCGTCGCCGCCGTCCCCACACCGCGCCGGCGCCCCTCGCCTCTCCACCGCGCCGCCGCCGTCCCCACTGCGCCGCATCGGCCTCCAAGTCTCCGCCGACTCCACCGAGCACGACGAGCTCAACACGAAGAGCTCCAAGAGAGGCCCCTCTCCTTCCTGCTCGGGTCGGCCGGATCTAGGAGGAGCAGAGGCTTCACCGTGGGCTTGGTAGGGATACCGTCCAGCACGACCTCGGCCAAGAAGGCAGCAGGTCTACGCCACCTTCTTCCCGTGCTGATGCCGTGTCTGAGCCCTACCTCACCACAAGTACTGCTCCATTTCTCTTTTTGAATCACCACCGGTTCTTGATTTCTTTGTGATCTAAATATTAAAGATGTTTATTCCATTGATTAAAGATGCTTGCCATTAGGAAATATATATATATTAGCTGCACGTTGTGTAGAACTCAAGAATGCTTAGAGGCACTCCATGCATGGGTTGTTTTAGCTGCACATGTACTGTCCGGCTGTTCAAATTTGAGCTATTTTCCAGTTAATTATTTAATTAACTCTTAATTATCTGATTCCTCAAATATTTTCCAATATAGTTATTCCTTCAACAAAATAATTGACATATCAGTTACTTCTTGCGGGTAACAAACCCACCGCCGGAGAGCACCTTTTGTTTTCTTATTTTCTTATTTGTCTGCCCTATCAAGTAGCACGCCATTTCAATACTCTTTATTCTTCCAGCAGTGCACATTATTGTGCCATTTCATATGTTAGCTCTAAATTCACATGTGTTAGCTCTAAATTGACATTATTATACAACTTCCAGCAGTATATGTCTTGCTCTGAATTTGCATGTGTTAGCTCTAAATTTAAGATGCTTGATATAGATTGTCCTTATGATGCTAGCTGCAATGACCCCATTATTTCAATGTAAAGGGGGGGGGGGGGGCACTTTACTATTATTGTTTTTTGATGTATTTAAGACGATCAAATCCTGTGCACTGAATGTTAGGGTCATTCAGTATTATTCTTTATCTTGGTGATAATCTGAAATTCCGAACTGTG]
[+] EMBL AK068188 [CTATCATTGCCGGCTCGCCGCTCCCTCGCTCTCCCCGCGCCGCGCCATCATCGCTGCCGCCCACGATTCGCCACCGTCCCCGCACCACGCCGCCGCCCCTCGCCTCTCCACCGCGCCGCCCCTCCACCAGCAGCCGTCCCTCACAAATCGTCACCGCCGTCATCAGCGCCGCCTCGCCGATCTCCTCTGCGCCGCCGCCCACGATTCGCCGCCGTCCCCACACCGCGCCGCCGCCGTCCACGATTAGCCGCCTCTCCACCGCGCCGCCGCCCCTCCACCAGCAGCCGTCCCTGACAAATCGTCGCCGCCGTCCCCACACCGCGCCGGCGCCCCTCGCCTCTCCACCGCGCCGCCGCCGTCCCCACTGCGCCGCATCGGCCTCCAAGTCTCCGCCGACTCCACCGAGCACGACGAGCTCAACACGAAGAGCTCCAAGAGAGGCCCCTCTCCTTCCTGCTCGGGTCGGCCGGATCTAGGAGGAGCAGAGGCTTCACCGTGGGCTTGGTAGGGATACCGTCCAGCACGACCTCGGCCAAGAAGGCAGCAGGTCTACGCCACCTTCTTCCCGTGCTGATGCCGTGTCTGAGCCCTACCTCACCACAAGTACTGCTCCATTTCTCTTTTTGAATCACCACCGGTTCTTGATTTCTTTGTGATCTAAATATTAAAGATGTTTATTCCATTGATTAAAGATGCTTGCCATTAGGAAATATATATATATTAGCTGCACGTTGTGTAGAACTCAAGAATGCTTAGAGGCACTCCATGCATGGGTTGTTTTAGCTGCACATGTACTGTCCGGCTGTTCAAATTTGAGCTATTTTCCAGTTAATTATTTAATTAACTCTTAATTATCTGATTCCTCAAATATTTTCCAATATAGTTATTCCTTCAACAAAATAATTGACATATCAGTTACTTCTTGCGGGTAACAAACCCACCGCCGGAGAGCACCTTTTGTTTTCTTATTTTCTTATTTGTCTGCCCTATCAAGTAGCACGCCATTTCAATACTCTTTATTCTTCCAGCAGTGCACATTATTGTGCCATTTCATATGTTAGCTCTAAATTCACATGTGTTAGCTCTAAATTGACATTATTATACAACTTCCAGCAGTATATGTCTTGCTCTGAATTTGCATGTGTTAGCTCTAAATTTAAGATGCTTGATATAGATTGTCCTTATGATGCTAGCTGCAATGACCCCATTATTTCAATGTAAAGGGGGGGGGGGGGGCACTTTACTATTATTGTTTTTTGATGTATTTAAGACGATCAAATCCTGTGCACTGAATGTTAGGGTCATTCAGTATTATTCTTTATCTTGGTGATAATCTGAAATTCCGAACTGTG]
[+] EMBL AK063084 [ GGCCGGATCTAGGAGGAGCAGAGGCTTCACCGTGGGCTTGGTAGGGATACCGTCCAGCACGACCTCGGCCAAGAAGGCAGCAGGTCTACGCCACCTTCTTCCCGTGCTGATGCCGTGTCTGAGCCCTACCTCACCACAAGTACTGCTCCATTTCTCTTTTTGAATCACCACCGGTTCTTGATTTCTTTGTGATCTAAATATTAAAGATGTTTATTCCATTGATTAAAGATGCTTGCCATTAGGAAATATATATATATTAGCTGCACGTTGTGTAGAACTCAAGAATGCTTAGAGGCACTCCATGCATGGGTTGTTTTAGCTGCACATGTACTGTCCGGCTGTTCAAATTTGAGCTATTTTCCAGTTAATTATTTAATTA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4014#0 CGCGCCGCGCCATCATCGCTGCCGCCCACGATTCGCCACCGTCCCCGCACCACGCCGCCG 60
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 CCCCTCGCCTCTCCACCGCGCCGCCCCCTCCACCAGCAGCCGTCCCTCACAAATCGTCAC 120
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 CGCCGTCATCAGCGCCGCCTCGCCGATCTCCTCTGCGCCGCCGCCCACGATTCGCCGCCG 180
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 TCCCCACACCGCGCCGCCGCCGTCCACGATTAGCCGCCTCTCCACCGCGCCGCCGCCCCT 240
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 CCACCAGCAGCCGTCCCTGACAAATCGTCGCCGCCGTCCCCACACCGCGCCGGCGCCCCT 300
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 CGCCTCTCCACCGCGCCGCCGCCGTCCCCACTGCGCCGCATCGGCCTCCAAGTCTCCGCC 360
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 GACTCCACCGAGCACGACGAGCTCAACACGAAGAGCTCCAAGAGAGGCCCCTCTCCTTCC 420
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 TGCTCGGGTCGGCCGGATCTAGGAGGAGCAGAGGCTTCACCGTGGGCTTGGTAGGGATAC 480
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 CGGTGAGCTCTCCCCCGTGACTCCTGCCTCCTCTGGTACAGCGAAATCAGTTCTTCCTCC 540
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 TCTAGGGCTTAGCTTGTTCCTTCTATTCTGATTACATGATTAGGTTAGGGCGAATTTTGT 600
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 GAGGGCTTTGCTGTCTAAGATTATGCGAGTAACCAAGAACCGATGGTGATTCAAAATAAG 660
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 AAAAACGATGGATGCTTTGTTTTTTTTATCTTCGACTTGGGGACTTGGGGTTGCTATTAC 720
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 TCGTGAGCTTGCCCTAAAATAATTGAATTCAACTAATCTACACTTTAGAGCATCTCAAAT 780
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 ATCATGTCTTTTGTCAATCCAAATAGCACATATACTGCAATGGTTGAGAACAAATTGGAT 840
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 GGTGCTGGTATAATTTAAATGTTTAGAAAAAAAAAAGTAATGCAGTAAACACAATGAT-T 899
consensus_4014#1 ------------CTATCATTGCCGGCTCGCCGCTCCCTCGCTCTCCCCGCGCCGCGCCAT 48
* * * ** * * * * * *
consensus_4014#0 CATGGAATAAAATCAACAAATGGCGACGATCGCCATCTCTGAATCAATGGTAGTTTACCC 959
consensus_4014#1 CATCGC-TGCCGCCCACGATTCGCCACCGTCCCCGCACC--ACGCCGCCGCCCCTCGCCT 105
*** * * * ** * * ** ** ** ** * * * * * **
consensus_4014#0 CTGCTATGGATATATTTCCTGTATAGAAAATGGTTTATTGGATAATGTATTGGATGTCAT 1019
consensus_4014#1 CTCCACCG--CGCCGCCCCTCCACCAGCAGCCGTCCCTCACAAATCGTCACCGCCGTCAT 163
** * * *** * * ** * * * ** * *****
consensus_4014#0 ATTGCCAATTCTCCATTGATTTTATAGTAATTAGAACTTCACATAAAAATGCTGATGTCA 1079
consensus_4014#1 --CAGCGCCGCCTCGCCGATCTCCTCTGCGCCGCCGCC-CACGATTCGCCGCCGTCCCCA 220
* * * *** * * * *** ** * **
consensus_4014#0 TGCAATTTCAATTTTGTATACAACTAGCAAATTGCCTCGAATATCATTGGAGTAGTGGGT 1139
consensus_4014#1 CACCGCGCCGCCGCCGTCCACGATTAGCCGCCTCTCCACCGCGCCGCCGCCCCTCCACCA 280
* * ** ** * **** * * * *
consensus_4014#0 ATGGTGGCACTGATTGCATTGATGGTCTCTTGAAGACTTTCTTTTTTCATCACTTAGCTG 1199
consensus_4014#1 GCAGCCGTCCCTGACAAATCGTCGCCGCCGTCCCCACACCGCGCCGGCGCCCCTCGCCTC 340
* * * ** * * * * ** * * ** **
consensus_4014#0 TCCATGTT--CATTGATATTTTTTTTTGGCAGTAGTAATCATATTAAGACTATAGTGCAG 1257
consensus_4014#1 TCCACCGCGCCGCCGCCGTCCCCACTGCGCCGCATCGGCCT--CCAAGTCTC---CGCCG 395
**** * * * * ** * * * *** ** ** *
consensus_4014#0 TTTCCAGTTAATCAGAAGCAATCAATTGAGGGAAATT---GAGACTCCCAAGACTTCCAT 1314
consensus_4014#1 ACTCCACCGAGCACGACGAGCTCAACACGAAGAGCTCCAAGAGAGGCCCCTCTCCTTCCT 455
**** * ** * **** ** * **** *** * * * *
consensus_4014#0 TTTCAGTCAATCAAAAGGTTATTTTTTGTTCTCATTGACAATTTCTAACTCAAATTCTGG 1374
consensus_4014#1 GCTCGG---GTCGGCCGGATCTAGGAGGAGCAGAGGCTTCACCGTGGGCTTGGTAGGGAT 512
** * ** ** * * * * * * **
consensus_4014#0 ACAGTCCAGCACGACCTCGGCCAAGAAGGCAGCAGGTCTACGCCACCTTCTTCCCGTGCT 1434
consensus_4014#1 ACCGTCCAGCACGACCTCGGCCAAGAAGGCAGCAGGTCTACGCCACCTTCTTCCCGTGCT 572
** *********************************************************
consensus_4014#0 GATGCCGTGTCTGAGCCCTACCTCACCACAAGTACTGCTCCATTTCTCTTTTTGAATCAC 1494
consensus_4014#1 GATGCCGTGTCTGAGCCCTACCTCACCACAAGTACTGCTCCATTTCTCTTTTTGAATCAC 632
************************************************************
consensus_4014#0 CACCGGTTCTTGATTTCTTTGTGATCTAAATATTAAAGATGTTTATTCCATTGATTAAAG 1554
consensus_4014#1 CACCGGTTCTTGATTTCTTTGTGATCTAAATATTAAAGATGTTTATTCCATTGATTAAAG 692
************************************************************
consensus_4014#0 ATGCTTGCCATTAGGAAATATATATATATTAGCTGCACGTTGTGTAGAACTCAAGAATGC 1614
consensus_4014#1 ATGCTTGCCATTAGGAAATATATATATATTAGCTGCACGTTGTGTAGAACTCAAGAATGC 752
************************************************************
consensus_4014#0 TTAGAGGCACTCCATGCATGGGTTGTTTTAGCTGCACATGTACTGTCCGGCTGTTCAAAT 1674
consensus_4014#1 TTAGAGGCACTCCATGCATGGGTTGTTTTAGCTGCACATGTACTGTCCGGCTGTTCAAAT 812
************************************************************
consensus_4014#0 TTGAGCTATTTTCCAGTTAATTATTTAATTAACTCTTAATTATCTGATTCCTCAAATATT 1734
consensus_4014#1 TTGAGCTATTTTCCAGTTAATTATTTAATTAACTCTTAATTATCTGATTCCTCAAATATT 872
************************************************************
consensus_4014#0 TTCCAATATAGTTATTCCTTCAACAAAATAATTGACATATCAGTTACTTCTTGCGGGTAA 1794
consensus_4014#1 TTCCAATATAGTTATTCCTTCAACAAAATAATTGACATATCAGTTACTTCTTGCGGGTAA 932
************************************************************
consensus_4014#0 CAAACCCACCGCCGGAGAGCACCTTTTGTTTTCTTATTTTCTTATTTGTCTGCCCTATCA 1854
consensus_4014#1 CAAACCCACCGCCGGAGAGCACCTTTTGTTTTCTTATTTTCTTATTTGTCTGCCCTATCA 992
************************************************************
consensus_4014#0 AGTAGCACGCCATTTCAATACTCTTTATTCTTCCAGCAGTGCACATTATTGTGCCATTTC 1914
consensus_4014#1 AGTAGCACGCCATTTCAATACTCTTTATTCTTCCAGCAGTGCACATTATTGTGCCATTTC 1052
************************************************************
consensus_4014#0 ATATGTTAGCTCTAAATTCACATGTGTTAGCTCTAAATTGACATTATTATACAACTTCCA 1974
consensus_4014#1 ATATGTTAGCTCTAAATTCACATGTGTTAGCTCTAAATTGACATTATTATACAACTTCCA 1112
************************************************************
consensus_4014#0 GCAGTATATGTCTTGCTCTGAATTTGCATGTGTTAGCTCTAAATTTAAGATGCTTGATAT 2034
consensus_4014#1 GCAGTATATGTCTTGCTCTGAATTTGCATGTGTTAGCTCTAAATTTAAGATGCTTGATAT 1172
************************************************************
consensus_4014#0 AGATTGTCCTTATGATGCTAGCTGCAATGACCCCATTATTTCAATGTAAAGGGGGGGGGG 2094
consensus_4014#1 AGATTGTCCTTATGATGCTAGCTGCAATGACCCCATTATTTCAATGTAAAGGGGGGGGGG 1232
************************************************************
consensus_4014#0 GGGGCACTTTACTATTATTGTTTTTTGATGTATTTAAGACGATCAAATCCTGTGCACTGA 2154
consensus_4014#1 GGGGCACTTTACTATTATTGTTTTTTGATGTATTTAAGACGATCAAATCCTGTGCACTGA 1292
************************************************************
consensus_4014#0 ATGTTAGGGTCATTCAGTATTATTCTTTATCTTGGTGATAATCTGAAATTCCGAACTGTG 2214
consensus_4014#1 ATGTTAGGGTCATTCAGTATTATTCTTTATCTTGGTGATAATCTGAAATTCCGAACTGTG 1352
************************************************************
consensus_4014#0 ATCTTCTCCCAAACAATATGCTTACATGTTCCCTCACTTTCATTTGGCACTATGCTTAAA 2274
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 TTATTATATCGTCTCAAACATGATCTAATAAATCATTGCATTTAGCATTCGATCAGAATG 2334
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 AAAGTTCTTGATTAACTTGCATGTTTGATCGATGAAGCCAACAAGCTGGTGAACAATTTG 2394
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 ATCCTTCGTCAAATTGATGCGAGGGCCCAACCAATAAACCCACTAAAGCTAACTCTCCGA 2454
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 TTGTGTAAGAGACTTACAAAGAAACTTATGGAGCGTATGTGTTCCCAGTAAACACCATAA 2514
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 ACTTATGGAGCGTATGCGAGGGCCACAGCTTACAGCACCCCCACCACATTAGGATTATCA 2574
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 CCATTGAAAACACAATCATTATGGTGTTTCCAAATCTCCTAGGCTACTAAAATAATCAAA 2634
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 GAATTCAATCTCATCCATACCCCTTTTGGAGCAACCTTAGTGACTTTGCTCCACCATCCT 2694
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 AAAAACATGTTGTAGAAGACTAAGGTGCAGCCAAAACCAAACCCAATTTTGTGAAGATTA 2754
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 AAGTCCATACTTGTCGGATCATGTACTTTTTGCTGGCTTGAGTTACCAGATTGATATCCA 2814
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 TCTGGAGGCAATCCACATGATTGGGAGGATTCTTGTCTTATCTAATCTTTGGTTTGGTCC 2874
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 TGAAAACCAACTATTTATAAGGAATTCTTGAAGAAATTTCTGACAAATCTTTCAGAAGTA 2934
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 AGAATTGCTACAATTAATGCAGAAAAAATCTGTTACATGGCTGTGTCTTCTGGTAGTGAA 2994
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 ACGAAAGGTATTATTAGCAAGACTGCTACTTTTATCTGTTCTTTTATTCAGAGTTTTGTA 3054
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 TTACCATCTTTTTCACACTAATATTTGGTTTTATTTGGCATCATCACTTAAGGGGATGTT 3114
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 GTTTGATTTTGATGACAAAATTAGGATCCAAGCTATTTCTGCGATTTAGCCTAATCAAAT 3174
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 TTAAGACCATGCCTTTCTGAGTTGATATTTCAAGCAGCAGACATGCTATGCGATAAAGGT 3234
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 CAGCACATTGCTATTTTTCATTGCTGAAGGTTCTATAAGGTGCTTCGTGTAAATTTACGC 3294
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 CATGAATTTGAATTCTGATTGGACATTGGTAAAGTTTTCCATGACTAAATTCTTATGCAT 3354
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 TTACCTTACAAATATGGATCTGCTCTCCAATTGACCACCCTTATATTTTGCATCTTTATG 3414
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 CATTTACTGTACAAATATGGATCTGCCCTCCAATTGACCACTCCTTTACATTTTGCATCT 3474
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 TACTGCATTTACTGTATAAATACGGATATTGGTAAATCCTGTGATGGCTATGAATTGCTT 3534
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 GGTATCTGAAAGTAACCAGTTGATGCCAATGGGTCTACGTGCATATTTCATGATTTTAAG 3594
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 ATTGCTAACGTGATGAAGAATTCCAAAATGGAGTTTTACCTGTGATGGCTCTGAATTGCT 3654
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 TGGTATCTGAAAGTAACCAGTTGATGCCAATGGGTCTACGTGCATATTTCATGATTTTAA 3714
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 GATTGCTAACGTGATGAAGAATTCCAAAATGGAGGTTGAACCTTCTGAGTTAATGGCTTC 3774
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 TTAGACAAAGCCAACTGATGTGTGAACTAAATTGAGTTTAGAACTGACTTTTATTTGAGT 3834
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 CGAACTATACTTCAAATAATATATTTTGTGTTAGTACCTCTGGATAGATATCGATATTTA 3894
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 AGAAAGTCATTTTCCATAATTCCCCTAATATTTTAGACAGAACAGTAGGCTCAGACTGCA 3954
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 TACTATTTTCCAGAATTTTGCATTTTGATTCAGCAGATTCTTTTGTGCATTTTAGTTTTC 4014
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 TATGGGCTCGATTCTCTTGCAGCTAGACTTGGTCAACTAACAAATTTGCAGGCTTACATG 4074
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 CATGTTTAGAAAACTGAGAGAATATCGGGCACATTAGCAATTCCTGATAAGAGAAGCTTA 4134
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 GAATCTTTCATGGGGAGTGAGGATTTGAATTCTTAGTTTTTACCTCAATTGACAATAGAA 4194
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 AGATTTGTAACCAGGATATATATCATGAATTAGCGATGTTTCCTTTGTATGGACCTATGT 4254
consensus_4014#1 ------------------------------------------------------------
consensus_4014#0 GTAATTGATGATTTTAAAAAATACAACACTTGTGATGTT 4293
consensus_4014#1 ---------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||