cluster # 4048

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Oryza sativa
cluster # 4048 cluster # 4048 Sequences # 3 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4048#0 length = 2014 sequences # 2

consensus_4048#1 length = 730 sequences # 1

consensusID : consensus_4048#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2014
fasta sequence

                              [CCCGCGCGATGACTCCGCCGCCACGAATCCCCGCTGCCTCCTCCCTCCTCCTCCCTCCCCCATGCCTAGGGAGGCCACGATGGGCTCCTGGCCAGTCACCGCCGCCAGCAATGCCCGACAACGCAACGCCCTACTACGCCAAGGGAAGGCCACGAGGGGCTTCCCGCTTGCCGTCGCGGCCGCCATGCCCTCCTCCGCACTGGACCGCTGCCACTCACTCCGCGCCCGGCGACACTATGGCCTCCCTCTGTCGCACCAAAGGGAGCTTCCCATTCACCGCCTCCATCGTGTCGTGAGGGACCTCCACTTGTGGCACTTCTGACGCTGCGACGCAGTGGAGGGCATTGCCTCTGGTGGCACCATGGTTCTACTGCCATTTACCGGAATCATATCATTTAGTGGTTTCAATCTCTTCTCCCCCTTCCAATTCATTGTTTTGTTTCTGCAATTTGGTTGACAAAGCAAGTTCCTTTATTGTCTGGACATACTGTATTTTGCCCAGTAGGTGTTCAATTAAATGCCACTGAAATAATCTGAATCAGAGCCGGTTTAATCATGCATCTACGTGGACACATCCTTTAGTTTTATTGTCTAATAGGTATTGATTATGTATATAGCAGTGCCATAAGAATTTTTCTCTACAGCTCATTCAAGCATTCAACAATGCTGGGCTGATTTTTGGAATGAGCAATATAAGTTTAACATTGTTCCATGTTTTTGCTTGTAGGATGTATACTTCTATTGTTGTCCTTACCCTCATACCTGCGTATGTGTAGTAATAAATATTGGTTGCATAAGAATGACACAGAAGACTGAGTGGGTCTTTGTTGCGAACCCAAAAGGCCTATAGATCTTACTGGTAATTCCTACAAGGACCAAACTCCATTTATAGATATTTGCACATTTATGCTATTTGCTTTTGCTTGTTCTGTACAATATTCTCCTATTTACCCTCTGGGGTCAACCTGTACTCAACACGTGCCACACCAATCTCAACCTATATCCAACATGTGCCACACTAATCTCAGGCTGGTATTGAATCTGCCACTGCCAGTGCAACAAAAAAACTAATGGTGAGGATGGTAATAGAATAAATCACAATGCTAATGTGCAGCCTCTAGACATATTGCAAGGAATTTGGCATCAATGTTTTTCTGTTACTGTATTTTCTATGTATCTGTCAATGCTTGACTGAATATTTTATTGCCATTTAACCACCCATGATGTGTTAATGCCACAAGCAGCTATGATAGACGGTGATGATGACAACGATGATGAAAGTTATCTCATGAGAGGTCAAGGTTGAATTTGATTGGAAATCAGCTCTGCAATGTCCTCTCAATCAAGGAGGAGCCTATGTCGATTACTTGAGCTTTTTAGCCATGTTAATGATTGTTGATATCGCTTGTAATCTTTGTCTCCAACAACACATTGCTCACAAGTGGGCTGGTTGAACTCCATATGAATGTGCATAAACTCAAGTGAAATTTGGGGCCACTTTAAAGAAGAGGGGCGAAGAAGATCTGTAAGTTAGAAGGTGAGCAACATGGATGGTGATGGTGTTCTGACGTCCAAATATGAAACCAGCCAACCAGCTTGGCAGCCTGAAGATCTTTTGGACCAAAAGGGCAGGCCTCTTTCCCAAGGTGAAGCACTTCGTAGCTACAATATGCGAGTGCTCAGCCTATACACCATATCCTTATATGAGTATGCTGAGAGTTTTATTCTCCATTGAGGTGAAGTATGCTCAAAAGTTTCGTTAAAATATATTCAGTTTAGTGATTTTGTTCATGAACTAACTCACTTCACTACCATGAACTCATTTCTCCAAAATTTTGGATCTTTTATTAGCAAATCTATGGACTGAAGTGGGGTTTTGGCCAGAGCTCCAATCCCCTGCAAATCCCAAATGCAGTACGAGTAATATTTTGCAAAATTATGTACTCCAGTTCTATTGGAATTGATGTAAAACCAACAAATTCTTAGTTTTGTCAGTTATTAAAACGCATAGATG]

[+] EMBL AK071936             [CCCGCGCGATGACTCCGCCGCCACGAATCCCCGCTGCCTCCTCCCTCCTCCTCCCTCCCCCATGCCTAGGGAGGCCACGATGGGCTCCTGGCCAGTCACCGCCGCCAGCAATGCCCGACAACGCAACGCCCTACTACGCCAAGGGAAGGCCACGAGGGGCTTCCCGCTTGCCGTCGCGGCCGCCATGCCCTCCTCCGCACTGGACCGCTGCCACTCACTCCGCGCCCGGCGACACTATGGCCTCCCTCTGTCGCACCAAAGGGAGCTTCCCATTCACCGCCTCCATCGTGTCGTGAGGGACCTCCACTTGTGGCACTTCTGACGCTGCGACGCAGTGGAGGGCATTGCCTCTGGTGGCACCATGGTTCTACTGCCATTTACCGGAATCATATCATTTAGTGGTTTCAATCTCTTCTCCCCCTTCCAATTCATTGTTTTGTTTCTGCAATTTGGTTGACAAAGCAAGTTCCTTTATTGTCTGGACATACTGTATTTTGCCCAGTAGGTGTTCAATTAAATGCCACTGAAATAATCTGAATCAGAGCCGGTTTAATCATGCATCTACGTGGACACATCCTTTAGTTTTATTGTCTAATAGGTATTGATTATGTATATAGCAGTGCCATAAGAATTTTTCTCTACAGCTCATTCAAGCATTCAACAATGCTGGGCTGATTTTTGGAATGAGCAATATAAGTTTAACATTGTTCCATGTTTTTGCTTGTAGGATGTATACTTCTATTGTTGTCCTTACCCTCATACCTGCGTATGTGTAGTAATAAATATTGGTTGCATAAGAATGACACAGAAGACTGAGTGGGTCTTTGTTGCGAACCCAAAAGGCCTATAGATCTTACTGGTAATTCCTACAAGGACCAAACTCCATTTATAGATATTTGCACATTTATGCTATTTGCTTTTGCTTGTTCTGTACAATATTCTCCTATTTACCCTCTGGGGTCAACCTGTACTCAACACGTGCCACACCAATCTCAACCTATATCCAACATGTGCCACACTAATCTCAGGCTGGTATTGAATCTGCCACTGCCAGTGCAACAAAAAAACTAATGGTGAGGATGGTAATAGAATAAATCACAATGCTAATGTGCAGCCTCTAGACATATTGCAAGGAATTTGGCATCAATGTTTTTCTGTTACTGTATTTTCTATGTATCTGTCAATGCTTGACTGAATATTTTATTGCCATTTAACCACCCATGATGTGTTAATGCCACAAGCAGCTATGATAGACGGTGATGATGACAACGATGATGAAAGTTATCTCATGAGAGGTCAAGGTTGAATTTGATTGGAAATCAGCTCTGCAATGTCCTCTCAATCAAGGAGGAGCCTATGTCGATTACTTGAGCTTTTTAGCCATGTTAATGATTGTTGATATCGCTTGTAATCTTTGTCTCCAACAACACATTGCTCACAAGTGGGCTGGTTGAACTCCATATGAATGTGCATAAACTCAAGTGAAATTTGGGGCCACTTTAAAGAAGAGGGGCGAAGAAGATCTGTAAGTTAGAAGGTGAGCAACATGGATGGTGATGGTGTTCTGACGTCCAAATATGAAACCAGCCAACCAGCTTGGCAGCCTGAAGATCTTTTGGACCAAAAGGGCAGGCCTCTTTCCCAAGGTGAAGCACTTCGTAGCTACAATATGCGAGTGCTCAGCCTATACACCATATCCTTATATGAGTATGCTGAGAGTTTTATTCTCCATTGAGGTGAAGTATGCTCAAAAGTTTCGTTAAAATATATTCAGTTTAGTGATTTTGTTCATGAACTAACTCACTTCACTACCATGAACTCATTTCTCCAAAATTTTGGATCTTTTATTAGCAAATCTATGGACTGAAGTGGGGTTTTGGCCAGAGCTCCAATCCCCTGCAAATCCCAAATGCAGTACGAGTAATATTTTGCAAAATTATGTACTCCAGTTCTATTGGAATTGATGTAAAACCAACAAATTCTTAGTTTTGTCAGTTATTAAAACGCATAGATG]
[+] EMBL CB674307             [                              CCGCTGCCTCCTCCCTCCTCCTCCCTCCCCCATGCCTAGGGAGGCCACGATGGGCTCCTGGCCAGTCACCGCCGCCAGCAATGCCCGACAACGCAACGCCCTACTACGCCAAGGGAAGGCCACGAGGGGCTTCCCGCTTGCCGTCGCGGCCGCCATGCCCTCCTCCGCACTGGACCGCTGCCACTCACTCCGCGCCCGGCGACACTATGGCCTCCCTCTGTCGCACCAAAGGGAGCTTCCCATTCACCGCCTCCATCGTGTCGTGAGGGACCTCCACTTGTGGCACTTCTGACGCTGCGACGCAGTGGAGGGCATTGCCTCTGGTGGCACCATGGTTCTACTGCCATTTACCGGAATCATATCATTTAGTGGTTTCAATCTCTTCTCCCCCTTCCAATTCATTGTTTTGTTTCTGCAATTTGGTTGACAAAGCAAGTTCCTTTATTGTCTGGACATACTGTATTTTGCCCAGTAGGTGTTCAATTAAATGCCACTGAAATAATCTGAATCAGAGCCGGTTTAATCATGCATCTACGTGGACACATCCTTTAGTTTTATTGTCTAATAGGTATTGATTATGTATATAGCAGTGCCATAAGAATTTTTCTCTACAGCTCATTCAAGCATTCAACAATGCTGGGCTGATTTTTGGAATGAGCAATATAAGTTTAACATTGTTCCATGTTTTTGCTTGTAGGATGTATACTTCTATTGTTGTCCTTACCCTCATACCTGCGTATGTGTAGTAATAAATATTGGTTGCATAAGAATGACACAGAAGACTGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]




>consensus_4048#0
CCCGCGCGATGACTCCGCCGCCACGAATCCCCGCTGCCTCCTCCCTCCTCCTCCCTCCCC
CATGCCTAGGGAGGCCACGATGGGCTCCTGGCCAGTCACCGCCGCCAGCAATGCCCGACA
ACGCAACGCCCTACTACGCCAAGGGAAGGCCACGAGGGGCTTCCCGCTTGCCGTCGCGGC
CGCCATGCCCTCCTCCGCACTGGACCGCTGCCACTCACTCCGCGCCCGGCGACACTATGG
CCTCCCTCTGTCGCACCAAAGGGAGCTTCCCATTCACCGCCTCCATCGTGTCGTGAGGGA
CCTCCACTTGTGGCACTTCTGACGCTGCGACGCAGTGGAGGGCATTGCCTCTGGTGGCAC
CATGGTTCTACTGCCATTTACCGGAATCATATCATTTAGTGGTTTCAATCTCTTCTCCCC
CTTCCAATTCATTGTTTTGTTTCTGCAATTTGGTTGACAAAGCAAGTTCCTTTATTGTCT
GGACATACTGTATTTTGCCCAGTAGGTGTTCAATTAAATGCCACTGAAATAATCTGAATC
AGAGCCGGTTTAATCATGCATCTACGTGGACACATCCTTTAGTTTTATTGTCTAATAGGT
ATTGATTATGTATATAGCAGTGCCATAAGAATTTTTCTCTACAGCTCATTCAAGCATTCA
ACAATGCTGGGCTGATTTTTGGAATGAGCAATATAAGTTTAACATTGTTCCATGTTTTTG
CTTGTAGGATGTATACTTCTATTGTTGTCCTTACCCTCATACCTGCGTATGTGTAGTAAT
AAATATTGGTTGCATAAGAATGACACAGAAGACTGAGTGGGTCTTTGTTGCGAACCCAAA
AGGCCTATAGATCTTACTGGTAATTCCTACAAGGACCAAACTCCATTTATAGATATTTGC
ACATTTATGCTATTTGCTTTTGCTTGTTCTGTACAATATTCTCCTATTTACCCTCTGGGG
TCAACCTGTACTCAACACGTGCCACACCAATCTCAACCTATATCCAACATGTGCCACACT
AATCTCAGGCTGGTATTGAATCTGCCACTGCCAGTGCAACAAAAAAACTAATGGTGAGGA
TGGTAATAGAATAAATCACAATGCTAATGTGCAGCCTCTAGACATATTGCAAGGAATTTG
GCATCAATGTTTTTCTGTTACTGTATTTTCTATGTATCTGTCAATGCTTGACTGAATATT
TTATTGCCATTTAACCACCCATGATGTGTTAATGCCACAAGCAGCTATGATAGACGGTGA
TGATGACAACGATGATGAAAGTTATCTCATGAGAGGTCAAGGTTGAATTTGATTGGAAAT
CAGCTCTGCAATGTCCTCTCAATCAAGGAGGAGCCTATGTCGATTACTTGAGCTTTTTAG
CCATGTTAATGATTGTTGATATCGCTTGTAATCTTTGTCTCCAACAACACATTGCTCACA
AGTGGGCTGGTTGAACTCCATATGAATGTGCATAAACTCAAGTGAAATTTGGGGCCACTT
TAAAGAAGAGGGGCGAAGAAGATCTGTAAGTTAGAAGGTGAGCAACATGGATGGTGATGG
TGTTCTGACGTCCAAATATGAAACCAGCCAACCAGCTTGGCAGCCTGAAGATCTTTTGGA
CCAAAAGGGCAGGCCTCTTTCCCAAGGTGAAGCACTTCGTAGCTACAATATGCGAGTGCT
CAGCCTATACACCATATCCTTATATGAGTATGCTGAGAGTTTTATTCTCCATTGAGGTGA
AGTATGCTCAAAAGTTTCGTTAAAATATATTCAGTTTAGTGATTTTGTTCATGAACTAAC
TCACTTCACTACCATGAACTCATTTCTCCAAAATTTTGGATCTTTTATTAGCAAATCTAT
GGACTGAAGTGGGGTTTTGGCCAGAGCTCCAATCCCCTGCAAATCCCAAATGCAGTACGA
GTAATATTTTGCAAAATTATGTACTCCAGTTCTATTGGAATTGATGTAAAACCAACAAAT
TCTTAGTTTTGTCAGTTATTAAAACGCATAGATG

consensusID : consensus_4048#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 730
fasta sequence

                              [ATTTGATTGGAAATCAGCTCTGCAATGTCCTTTCAATCAAGGAGGAGCCTATGTCGATTACTTGAGCTTTTTAGCCATGTTAATGATTGTGGATATCGCTTGTAATCTTTGTTTCCAACAACACATTGTTCACAAGGGGGGGGGTTGAACTCCATATGAATGGGCATAAACTCAAGGGAAATTTGGGGCCCCTTTAAAGAAGAGGGGGGAAGAAGATTTGTAAGTTAGAAGGTGAGCAACATGGATGGGGATGGTGTTTTGACGTCCAAATATGAAACCAGCCAACCAGCTTGGCAGCCTGAAGATTTTTTGGACCAAAAGGGCAGGCCTTTTTCCCAAGGGGAAGCCCTTGGTAGTTACAATATGGGAGGGTTCAGCCTATACCCCATATCCTTATATGAGTATGGGGGGAGTTTTTTTTTCCATTGAGCAAATTTATGGACTGAAGGGGGGTTTTGGCCAGAGCTCCAATCCCCTGCAAATCCCAAATGCAGTAGGGGTAATATTTTGCAAAATTATGTACTCCAGTTTTTTTGGAATTGATGTAAAACCAACAAATTTTTAGTTTTGTCAGTTATTAAAACGCATAGATGCATATTGGGTATGCCATTATATCAAACGGGGGTTGCACGTACATGATTATTAGTAACTACAAAAAGAACGTCCCTCTTGGAACGCTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA]

[-] EMBL CB674308             [ATTTGATTGGAAATCAGCTCTGCAATGTCCTTTCAATCAAGGAGGAGCCTATGTCGATTACTTGAGCTTTTTAGCCATGTTAATGATTGTGGATATCGCTTGTAATCTTTGTTTCCAACAACACATTGTTCACAAGGGGGGGGGTTGAACTCCATATGAATGGGCATAAACTCAAGGGAAATTTGGGGCCCCTTTAAAGAAGAGGGGGGAAGAAGATTTGTAAGTTAGAAGGTGAGCAACATGGATGGGGATGGTGTTTTGACGTCCAAATATGAAACCAGCCAACCAGCTTGGCAGCCTGAAGATTTTTTGGACCAAAAGGGCAGGCCTTTTTCCCAAGGGGAAGCCCTTGGTAGTTACAATATGGGAGGGTTCAGCCTATACCCCATATCCTTATATGAGTATGGGGGGAGTTTTTTTTTCCATTGAGCAAATTTATGGACTGAAGGGGGGTTTTGGCCAGAGCTCCAATCCCCTGCAAATCCCAAATGCAGTAGGGGTAATATTTTGCAAAATTATGTACTCCAGTTTTTTTGGAATTGATGTAAAACCAACAAATTTTTAGTTTTGTCAGTTATTAAAACGCATAGATGCATATTGGGTATGCCATTATATCAAACGGGGGTTGCACGTACATGATTATTAGTAACTACAAAAAGAACGTCCCTCTTGGAACGCTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA]




>consensus_4048#1
ATTTGATTGGAAATCAGCTCTGCAATGTCCTTTCAATCAAGGAGGAGCCTATGTCGATTA
CTTGAGCTTTTTAGCCATGTTAATGATTGTGGATATCGCTTGTAATCTTTGTTTCCAACA
ACACATTGTTCACAAGGGGGGGGGTTGAACTCCATATGAATGGGCATAAACTCAAGGGAA
ATTTGGGGCCCCTTTAAAGAAGAGGGGGGAAGAAGATTTGTAAGTTAGAAGGTGAGCAAC
ATGGATGGGGATGGTGTTTTGACGTCCAAATATGAAACCAGCCAACCAGCTTGGCAGCCT
GAAGATTTTTTGGACCAAAAGGGCAGGCCTTTTTCCCAAGGGGAAGCCCTTGGTAGTTAC
AATATGGGAGGGTTCAGCCTATACCCCATATCCTTATATGAGTATGGGGGGAGTTTTTTT
TTCCATTGAGCAAATTTATGGACTGAAGGGGGGTTTTGGCCAGAGCTCCAATCCCCTGCA
AATCCCAAATGCAGTAGGGGTAATATTTTGCAAAATTATGTACTCCAGTTTTTTTGGAAT
TGATGTAAAACCAACAAATTTTTAGTTTTGTCAGTTATTAAAACGCATAGATGCATATTG
GGTATGCCATTATATCAAACGGGGGTTGCACGTACATGATTATTAGTAACTACAAAAAGA
ACGTCCCTCTTGGAACGCTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4048#0      CCCGCGCGATGACTCCGCCGCCACGAATCCCCGCTGCCTCCTCCCTCCTCCTCCCTCCCC 60
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      CATGCCTAGGGAGGCCACGATGGGCTCCTGGCCAGTCACCGCCGCCAGCAATGCCCGACA 120
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      ACGCAACGCCCTACTACGCCAAGGGAAGGCCACGAGGGGCTTCCCGCTTGCCGTCGCGGC 180
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      CGCCATGCCCTCCTCCGCACTGGACCGCTGCCACTCACTCCGCGCCCGGCGACACTATGG 240
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      CCTCCCTCTGTCGCACCAAAGGGAGCTTCCCATTCACCGCCTCCATCGTGTCGTGAGGGA 300
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      CCTCCACTTGTGGCACTTCTGACGCTGCGACGCAGTGGAGGGCATTGCCTCTGGTGGCAC 360
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      CATGGTTCTACTGCCATTTACCGGAATCATATCATTTAGTGGTTTCAATCTCTTCTCCCC 420
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      CTTCCAATTCATTGTTTTGTTTCTGCAATTTGGTTGACAAAGCAAGTTCCTTTATTGTCT 480
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      GGACATACTGTATTTTGCCCAGTAGGTGTTCAATTAAATGCCACTGAAATAATCTGAATC 540
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      AGAGCCGGTTTAATCATGCATCTACGTGGACACATCCTTTAGTTTTATTGTCTAATAGGT 600
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      ATTGATTATGTATATAGCAGTGCCATAAGAATTTTTCTCTACAGCTCATTCAAGCATTCA 660
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      ACAATGCTGGGCTGATTTTTGGAATGAGCAATATAAGTTTAACATTGTTCCATGTTTTTG 720
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      CTTGTAGGATGTATACTTCTATTGTTGTCCTTACCCTCATACCTGCGTATGTGTAGTAAT 780
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      AAATATTGGTTGCATAAGAATGACACAGAAGACTGAGTGGGTCTTTGTTGCGAACCCAAA 840
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      AGGCCTATAGATCTTACTGGTAATTCCTACAAGGACCAAACTCCATTTATAGATATTTGC 900
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      ACATTTATGCTATTTGCTTTTGCTTGTTCTGTACAATATTCTCCTATTTACCCTCTGGGG 960
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      TCAACCTGTACTCAACACGTGCCACACCAATCTCAACCTATATCCAACATGTGCCACACT 1020
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      AATCTCAGGCTGGTATTGAATCTGCCACTGCCAGTGCAACAAAAAAACTAATGGTGAGGA 1080
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      TGGTAATAGAATAAATCACAATGCTAATGTGCAGCCTCTAGACATATTGCAAGGAATTTG 1140
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      GCATCAATGTTTTTCTGTTACTGTATTTTCTATGTATCTGTCAATGCTTGACTGAATATT 1200
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      TTATTGCCATTTAACCACCCATGATGTGTTAATGCCACAAGCAGCTATGATAGACGGTGA 1260
consensus_4048#1      ------------------------------------------------------------
                                                                                  

consensus_4048#0      TGATGACAACGATGATGAAAGTTATCTCATGAGAGGTCAAGGTTGAATTTGATTGGAAAT 1320
consensus_4048#1      ----------------------------------------------ATTTGATTGGAAAT 14
                                                                    **************

consensus_4048#0      CAGCTCTGCAATGTCCTCTCAATCAAGGAGGAGCCTATGTCGATTACTTGAGCTTTTTAG 1380
consensus_4048#1      CAGCTCTGCAATGTCCTTTCAATCAAGGAGGAGCCTATGTCGATTACTTGAGCTTTTTAG 74
                      ***************** ******************************************

consensus_4048#0      CCATGTTAATGATTGTTGATATCGCTTGTAATCTTTGTCTCCAACAACACATTGCTCACA 1440
consensus_4048#1      CCATGTTAATGATTGTGGATATCGCTTGTAATCTTTGTTTCCAACAACACATTGTTCACA 134
                      **************** ********************* *************** *****

consensus_4048#0      AGTGGGCTGGTTGAACTCCATATGAATGTGCATAAACTCAAGTGAAATTTGGGGCCACTT 1500
consensus_4048#1      AGGGGGGGGGTTGAACTCCATATGAATGGGCATAAACTCAAGGGAAATTTGGGGCCCCTT 194
                      ** ***  ******************** ************* ************* ***

consensus_4048#0      TAAAGAAGAGGGGCGAAGAAGATCTGTAAGTTAGAAGGTGAGCAACATGGATGGTGATGG 1560
consensus_4048#1      TAAAGAAGAGGGGGGAAGAAGATTTGTAAGTTAGAAGGTGAGCAACATGGATGGGGATGG 254
                      ************* ********* ****************************** *****

consensus_4048#0      TGTTCTGACGTCCAAATATGAAACCAGCCAACCAGCTTGGCAGCCTGAAGATCTTTTGGA 1620
consensus_4048#1      TGTTTTGACGTCCAAATATGAAACCAGCCAACCAGCTTGGCAGCCTGAAGATTTTTTGGA 314
                      **** *********************************************** *******

consensus_4048#0      CCAAAAGGGCAGGCCTCTTTCCCAAGGTGAAGCACTTCGTAGCTACAATATGCGAGTGCT 1680
consensus_4048#1      CCAAAAGGGCAGGCCTTTTTCCCAAGGGGAAGCCCTTGGTAGTTACAATATGGGAGGGTT 374
                      **************** ********** ***** *** **** ********* *** * *

consensus_4048#0      CAGCCTATACACCATATCCTTATATGAGTATGCTGAGAGTTTTATTCTCCATTGAGGTGA 1740
consensus_4048#1      CAGCCTATACCCCATATCCTTATATGAGTATGGGGGGAGTTTTTTTTTCCATTGAGCAAA 434
                      ********** *********************  * ******* ** *********   *

consensus_4048#0      AGTATGCTCAAAAG------TTTCGTTAAAATAT--ATTCAGTTTAGTGATTTTGTTCAT 1792
consensus_4048#1      TTTATGGACTGAAGGGGGGTTTTGGCCAGAGCTCCAATCCCCTGCAAATCCCAAATGCAG 494
                        ****  *  ***      *** *  * *      ** *  *  *         * ** 

consensus_4048#0      --GAACTAACTCACTTCACTACCATGAACTC--ATTTCTCCAAAATTTTGGATCTTTTAT 1848
consensus_4048#1      TAGGGGTAATATTTTGCAAAATTATGTACTCCAGTTTTTTTGGAATT---GATGTAAAAC 551
                        *   ***     * **  *  *** ****   *** *    ****   *** *   * 

consensus_4048#0      TAGCAAATCTATGGACTGAAGTGGGGTTTTGGC-CAGAGCTCCAATCC---CCTGCAA-- 1902
consensus_4048#1      CAACAAATTTTTAGTTTTGTCAGTTATTAAAACGCATAGATGCATATTGGGTATGCCATT 611
                       * ***** * * *  *     *   **    * ** ** * **         *** *  

consensus_4048#0      ATCCCAAATGCAG--TACGAGTA----ATATTTTGCAAAATTATGTACTCCAGTTCTATT 1956
consensus_4048#1      ATATCAAACGGGGGTTGCACGTACATGATTATTAGTAACTACAAAAAGAACGTCCCTCTT 671
                      **  **** *  *  * *  ***    **  ** * **    *   *   *    ** **

consensus_4048#0      GGAATTGATGTAAAACCAACAAATTCTTAGTTTTGTCAGTTATTAAAACGCATAGATG- 2014
consensus_4048#1      GGAACGCTTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGA 730
                      ****    *** ***  ** ***     *        *   *  ****   * * * *