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Oryza sativa
cluster # 4070 cluster # 4070       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4070#0 length = 3086 sequences # 2  
 consensus_4070#1 length = 809 sequences # 1  
consensusID : consensus_4070#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3086
fasta sequence 
                              [TTTCATACCCTCGAGAGGAAAAGGCCACCATGCTTCCGATTTCTAACACAAAAGTCTCAAGAAAAAACGAGTCTTGAGAGAAAACGAGTTGTAGCACAAGCTGTTTCGGACAAGGAAAAACTGAAGCTTTTCCAGAGCTTCCTGCAAAGGTACTCATCATCAATTGTGCCATCCAAATTGAAGTTCAAATTTCCACTGCCAAGATGATCAAACTCCGGTCAGCTCTAGGCGTTCTTGAGATCTTGTCAGTTCTTTGCATCAGCCTTGTTGCTGCATACACTCCAGTAGACAACTACCTCATCAGCTGCGGCTCATCGGTCGACACGCCGGTTGGCCAGCGGCTGTTCGTCGCCGACGACTCGGGCACGGTCGTCCTGACATCTCCGGCGAGTGACGCGGTGAAAGCCTCGCCCAGCGCGGTGTCCGGGTTGCGCGACGACGCCGCCATGTACCAGAGCGCCAGGGTGTTCATGGCGCCGTCGTCCTACTCGTTCCGGATCAGGGACCCCGGCCGCCACTTCGTCCGCCTCCACTTCTTCCCCTTCGTGTACCTCGGCTACGACCTCGCCACGGCGAGCTTCAAGGTGTCGACGCAGGACGCCGTCCTGCTCGACGGCTTCGCGCCGGCGGCGGCGGCGAGGGGCAACGCGTCGACGACGACGACGACGGCGACGGCGGCGGCGGTGTGCGAGGAGTTCCTGCTGGACGTGGCGCGCGACACGCTCGTCGTCACGTTCGTGCCGCTCGCCGGCAGGCTCGCGTTCGTCAACGCCATCGAGGTCGTCTCGGTCCCCGACGACCTCATCGGCGCTGCTGACTCGTCGCTGTCGACGTCCGACTCCACTGGCCAGCAGCTCAACCCTGCCGTGATGCCGCTGCAAACGGTCTATCGGGTCAATGTGGGCGGCCAAGCGGTGGCGCCCGACAGCGACACGCTCTGGCGAGAATGGACTAGTGACCAGCAATTATTGGTTGGACCCGCAATGACTAAAGGAGTTTCTTACAATCGAACACCGAACTACCTGCCCGGGCAAGCGACGGCGAACGACGCACCGGCCATCGTCTACGCCACCGGCAGGGAGCTTATCATCATGACGAACTCGACGGACGACGGCATGAAACAAATGGCGTGGCAGTTCGACGTCGGCAGGTCGGCGAGCTACCTGATCAGGTTCCACTTCTGTGACATCGTGAGCAGCGTGCCTGGCCGCCTCCACATGAACGCCTATGTCGACAGCTCCAACGCGATTCAAGATCTCGACCTCTCCGCCATTGGCAATGGCACGCTGGCGTTCCCGTATTACAGAGACTTCGTGCTGGCTGCTAGCACTCCATCCGGCAAGCTCGCCGTCTACGTTGGGTCGACGTCGCAGAAGATCACGACACCTGCCGCCATTCTCAATGGCCTAGAGATCATGAGGATACTCACGACCGCCGGCAACGTCGCCGTCGTCGAGCCAACGATGCCGCCGGGAACGAAGAAGAAGAACAATTTGGCCGTCGTTCTTGGCTCAGTCTGTGGAGCTTTCGGTTTCGTTTCCGTCGCCGCTGCTCTTGTCATTGTTCTTAGGAGGAAAGAGGAGAAGGAGGAGCTGCGGACGCCGACGACGAGCCAGCCGTCGACGGCATGGATGCCGCTCCTCGGCCGGATCAGCTTCCGCAGCGCGCCGCCGAGCGCCGTCGGGTCACGGTCGCCCAGCTTCACCATTGACACCAACGCCAACACTCCAGGAGGAGGCGCCACTCCCGGCATGGCCGCGGCGGCCTCGTCTTCCCCGAGCTACCGCTTCCCGTTCGCCGCGCTGCAGGACGCGACGGGCAACTTCGACGAGGGCCTCGTCATCGGCGAGGGCGGGTTCGGGAAGGTGTACGCCGCCGTGCTCCAGGACGGCACCAAGGTCGCCGTGAAGCGCGCGAACCCGGAGTCGCGGCAGGGCGCGCGGGAGTTCCGCACGGAGATCGAGATGCTCTCCGGCCTGCGCCACCGTCACCTCGTCTCCCTCATCGGCTACTGCGACGAGCAGGATGAGATGATCCTGCTCTACGAGTACATGGAGCACGGCTCGCTGCGGAGCCGCCTGTACGGCGGCGGCGCGGCGACGGCGACGGCGACGGCGCTCAGCTGGGCGCAGCGGCTGGAGGCATGCGCCGGCGCGGCGAGGGGGCTCCTCTACCTGCACACGGCCACCGCCAAGCCGGTGATTCACCGCGACGTCAAGTCGTCGAACATCTTGCTCGACGACGGCCTCACGGCGAAGGTCGCCGACTTCGGCCTCTCCAAGGCCGGGCCGGACATGGACGAGACGCACGTCAGCACGGCGGTGAAGGGGAGCTTCGGCTACGTGGACCCGGAGTACGTGAGGACGAGGAAGCTCACCGCCAAGTCCGACGTCTACTCGTTCGGCGTCGTGCTCCTCGAGGCGCTGTGCGCGCGCCCCGTCGTCGACCCGAGGTTGCCCAAGCCGATGGTGAACCTCGTCGAGTGGGGGTTGCACTGGCAGCGGAGGGACGAGCTGGAGAAGATCGTCGACCGGCGGATCGCCGGGACGGTGAGGCCCGCCGCGCTGAGGAAGTACGGCGAGACGGTGGCCAGGTGCCTCGCCGACCGCGGCGCCGACCGGCCGGCGATGGAGGACGTCGTGTGGAGCCTGCAGTTCGTGGCGCGGCTGCAGGAGGTGGACGGCCTCGACGCCTCCGACGTGAGCAGCCTCAACATGGTTCATCAGCTGATGCCGCCGACGAGCTTGCACGCTCGTCAGAGAAGCGCCGGCGAAAGCGAGACCGGCAGGACGGACGCCGACGAGGACAGCAGTGTGGTAGATGATGATTACACCGATGCTTCCATGAGAGGAATCTTCTGGCAAATGGTCAATGTGCGCGGGAGATGATACTGATCAGTCATCTTCAAACATTCCAGATCATGAATTAGTCATCTTCAGACTGGTCAGTTCATTGTTGAACATTCCAGGTCAAAATTCACCTCTCCAGTATCCAGTCGGAAAAAGTGAACAAAGACATACTTAGAATTTAAAATATACTTACCAGTGAAAATTTTGTACTGTCCCTACAATGGAGTTCAAACATAT]

[+] EMBL AK099840             [TTTCATACCCTCGAGAGGAAAAGGCCACCATGCTTCCGATTTCTAACACAAAAGTCTCAAGAAAAAACGAGTCTTGAGAGAAAACGAGTTGTAGCACAAGCTGTTTCGGACAAGGAAAAACTGAAGCTTTTCCAGAGCTTCCTGCAAAGGTACTCATCATCAATTGTGCCATCCAAATTGAAGTTCAAATTTCCACTGCCAAGATGATCAAACTCCGGTCAGCTCTAGGCGTTCTTGAGATCTTGTCAGTTCTTTGCATCAGCCTTGTTGCTGCATACACTCCAGTAGACAACTACCTCATCAGCTGCGGCTCATCGGTCGACACGCCGGTTGGCCAGCGGCTGTTCGTCGCCGACGACTCGGGCACGGTCGTCCTGACATCTCCGGCGAGTGACGCGGTGAAAGCCTCGCCCAGCGCGGTGTCCGGGTTGCGCGACGACGCCGCCATGTACCAGAGCGCCAGGGTGTTCATGGCGCCGTCGTCCTACTCGTTCCGGATCAGGGACCCCGGCCGCCACTTCGTCCGCCTCCACTTCTTCCCCTTCGTGTACCTCGGCTACGACCTCGCCACGGCGAGCTTCAAGGTGTCGACGCAGGACGCCGTCCTGCTCGACGGCTTCGCGCCGGCGGCGGCGGCGAGGGGCAACGCGTCGACGACGACGACGACGGCGACGGCGGCGGCGGTGTGCGAGGAGTTCCTGCTGGACGTGGCGCGCGACACGCTCGTCGTCACGTTCGTGCCGCTCGCCGGCAGGCTCGCGTTCGTCAACGCCATCGAGGTCGTCTCGGTCCCCGACGACCTCATCGGCGCTGCTGACTCGTCGCTGTCGACGTCCGACTCCACTGGCCAGCAGCTCAACCCTGCCGTGATGCCGCTGCAAACGGTCTATCGGGTCAATGTGGGCGGCCAAGCGGTGGCGCCCGACAGCGACACGCTCTGGCGAGAATGGACTAGTGACCAGCAATTATTGGTTGGACCCGCAATGACTAAAGGAGTTTCTTACAATCGAACACCGAACTACCTGCCCGGGCAAGCGACGGCGAACGACGCACCGGCCATCGTCTACGCCACCGGCAGGGAGCTTATCATCATGACGAACTCGACGGACGACGGCATGAAACAAATGGCGTGGCAGTTCGACGTCGGCAGGTCGGCGAGCTACCTGATCAGGTTCCACTTCTGTGACATCGTGAGCAGCGTGCCTGGCCGCCTCCACATGAACGCCTATGTCGACAGCTCCAACGCGATTCAAGATCTCGACCTCTCCGCCATTGGCAATGGCACGCTGGCGTTCCCGTATTACAGAGACTTCGTGCTGGCTGCTAGCACTCCATCCGGCAAGCTCGCCGTCTACGTTGGGTCGACGTCGCAGAAGATCACGACACCTGCCGCCATTCTCAATGGCCTAGAGATCATGAGGATACTCACGACCGCCGGCAACGTCGCCGTCGTCGAGCCAACGATGCCGCCGGGAACGAAGAAGAAGAACAATTTGGCCGTCGTTCTTGGCTCAGTCTGTGGAGCTTTCGGTTTCGTTTCCGTCGCCGCTGCTCTTGTCATTGTTCTTAGGAGGAAAGAGGAGAAGGAGGAGCTGCGGACGCCGACGACGAGCCAGCCGTCGACGGCATGGATGCCGCTCCTCGGCCGGATCAGCTTCCGCAGCGCGCCGCCGAGCGCCGTCGGGTCACGGTCGCCCAGCTTCACCATTGACACCAACGCCAACACTCCAGGAGGAGGCGCCACTCCCGGCATGGCCGCGGCGGCCTCGTCTTCCCCGAGCTACCGCTTCCCGTTCGCCGCGCTGCAGGACGCGACGGGCAACTTCGACGAGGGCCTCGTCATCGGCGAGGGCGGGTTCGGGAAGGTGTACGCCGCCGTGCTCCAGGACGGCACCAAGGTCGCCGTGAAGCGCGCGAACCCGGAGTCGCGGCAGGGCGCGCGGGAGTTCCGCACGGAGATCGAGATGCTCTCCGGCCTGCGCCACCGTCACCTCGTCTCCCTCATCGGCTACTGCGACGAGCAGGATGAGATGATCCTGCTCTACGAGTACATGGAGCACGGCTCGCTGCGGAGCCGCCTGTACGGCGGCGGCGCGGCGACGGCGACGGCGACGGCGCTCAGCTGGGCGCAGCGGCTGGAGGCATGCGCCGGCGCGGCGAGGGGGCTCCTCTACCTGCACACGGCCACCGCCAAGCCGGTGATTCACCGCGACGTCAAGTCGTCGAACATCTTGCTCGACGACGGCCTCACGGCGAAGGTCGCCGACTTCGGCCTCTCCAAGGCCGGGCCGGACATGGACGAGACGCACGTCAGCACGGCGGTGAAGGGGAGCTTCGGCTACGTGGACCCGGAGTACGTGAGGACGAGGAAGCTCACCGCCAAGTCCGACGTCTACTCGTTCGGCGTCGTGCTCCTCGAGGCGCTGTGCGCGCGCCCCGTCGTCGACCCGAGGTTGCCCAAGCCGATGGTGAACCTCGTCGAGTGGGGGTTGCACTGGCAGCGGAGGGACGAGCTGGAGAAGATCGTCGACCGGCGGATCGCCGGGACGGTGAGGCCCGCCGCGCTGAGGAAGTACGGCGAGACGGTGGCCAGGTGCCTCGCCGACCGCGGCGCCGACCGGCCGGCGATGGAGGACGTCGTGTGGAGCCTGCAGTTCGTGGCGCGGCTGCAGGAGGTGGACGGCCTCGACGCCTCCGACGTGAGCAGCCTCAACATGGTTCATCAGCTGATGCCGCCGACGAGCTTGCACGCTCGTCAGAGAAGCGCCGGCGAAAGCGAGACCGGCAGGACGGACGCCGACGAGGACAGCAGTGTGGTAGATGATGATTACACCGATGCTTCCATGAGAGGAATCTTCTGGCAAATGGTCAATGTGCGCGGGAGATGATACTGATCAGTCATCTTCAAACATTCCAGATCATGAATTAGTCATCTTCAGACTGGTCAGTTCATTGTTGAACATTCCAGGTCAAAATTCACCTCTCCAGTATCCAGTCGGAAAAAGTGAACAAAGACATA                                                                   ]
[-] EMBL CB675893             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CGCACGTCAGCACGGCGGTGAAGGGGAGCTTCGGCTACGTGGACCCGGAGTACGTGAGGACGAGGAAGCTCACCGCCAAGTCCGACGTCTACTCGTTCGGCGTCGTGCTCCTCGAGGCGCTGTGCGCGCGCCCCGTCGTCGACCCGAGGTTGCCCAAGCCGATGGTGAACCTCGTCGAGTGGGGGTTGCACTGGCAGCGGAGGGACGAGCTGGAGAAGATCGTCGACCGGCGGATCGCCGGGACGGTGAGGCCCGCCGCGCTGAGGAAGTACGGCGAGACGGTGGCCAGGTGCCTCGCCGACCGCGGCGCCGACCGGCCGGCGATGGAGGACGTCGTGTGGAGCCTGCAGTTCGTGGCGCGGCTGCAGGAGGTGGACGGCCTCGACGCCTCCGACGTGAGCAGCCTCAACATGGTTCATCAGCTGATGCCGCCGACGAGCTTGCACGCTCGTCAGAGAAGCGCCGGCGAAAGCGAGACCGGCAGGACGGACGCCGACGAGGACAGCAGTGTGGTAGATGATGATTACACCGATGCTTCCATGAGAGGAATCTTCTGGCAAATGGTCAATGTGCGCGGGAGATGATACTGATCAGTCATCTTCAAACATTCCAGATCATGAATTAGTCATCTTCAGACTGGTCAGTTCATTGTTGAACATTCCAGGTCAAAATTCACCTCTCCAGTATCCAGTCGGAAAAAGTGAACAAAGACATACTTAGAATTTAAAATATACTTACCAGTGAAAATTTTGTACTGTCCCTACAATGGAGTTCAAACATAT]




>consensus_4070#0
TTTCATACCCTCGAGAGGAAAAGGCCACCATGCTTCCGATTTCTAACACAAAAGTCTCAA
GAAAAAACGAGTCTTGAGAGAAAACGAGTTGTAGCACAAGCTGTTTCGGACAAGGAAAAA
CTGAAGCTTTTCCAGAGCTTCCTGCAAAGGTACTCATCATCAATTGTGCCATCCAAATTG
AAGTTCAAATTTCCACTGCCAAGATGATCAAACTCCGGTCAGCTCTAGGCGTTCTTGAGA
TCTTGTCAGTTCTTTGCATCAGCCTTGTTGCTGCATACACTCCAGTAGACAACTACCTCA
TCAGCTGCGGCTCATCGGTCGACACGCCGGTTGGCCAGCGGCTGTTCGTCGCCGACGACT
CGGGCACGGTCGTCCTGACATCTCCGGCGAGTGACGCGGTGAAAGCCTCGCCCAGCGCGG
TGTCCGGGTTGCGCGACGACGCCGCCATGTACCAGAGCGCCAGGGTGTTCATGGCGCCGT
CGTCCTACTCGTTCCGGATCAGGGACCCCGGCCGCCACTTCGTCCGCCTCCACTTCTTCC
CCTTCGTGTACCTCGGCTACGACCTCGCCACGGCGAGCTTCAAGGTGTCGACGCAGGACG
CCGTCCTGCTCGACGGCTTCGCGCCGGCGGCGGCGGCGAGGGGCAACGCGTCGACGACGA
CGACGACGGCGACGGCGGCGGCGGTGTGCGAGGAGTTCCTGCTGGACGTGGCGCGCGACA
CGCTCGTCGTCACGTTCGTGCCGCTCGCCGGCAGGCTCGCGTTCGTCAACGCCATCGAGG
TCGTCTCGGTCCCCGACGACCTCATCGGCGCTGCTGACTCGTCGCTGTCGACGTCCGACT
CCACTGGCCAGCAGCTCAACCCTGCCGTGATGCCGCTGCAAACGGTCTATCGGGTCAATG
TGGGCGGCCAAGCGGTGGCGCCCGACAGCGACACGCTCTGGCGAGAATGGACTAGTGACC
AGCAATTATTGGTTGGACCCGCAATGACTAAAGGAGTTTCTTACAATCGAACACCGAACT
ACCTGCCCGGGCAAGCGACGGCGAACGACGCACCGGCCATCGTCTACGCCACCGGCAGGG
AGCTTATCATCATGACGAACTCGACGGACGACGGCATGAAACAAATGGCGTGGCAGTTCG
ACGTCGGCAGGTCGGCGAGCTACCTGATCAGGTTCCACTTCTGTGACATCGTGAGCAGCG
TGCCTGGCCGCCTCCACATGAACGCCTATGTCGACAGCTCCAACGCGATTCAAGATCTCG
ACCTCTCCGCCATTGGCAATGGCACGCTGGCGTTCCCGTATTACAGAGACTTCGTGCTGG
CTGCTAGCACTCCATCCGGCAAGCTCGCCGTCTACGTTGGGTCGACGTCGCAGAAGATCA
CGACACCTGCCGCCATTCTCAATGGCCTAGAGATCATGAGGATACTCACGACCGCCGGCA
ACGTCGCCGTCGTCGAGCCAACGATGCCGCCGGGAACGAAGAAGAAGAACAATTTGGCCG
TCGTTCTTGGCTCAGTCTGTGGAGCTTTCGGTTTCGTTTCCGTCGCCGCTGCTCTTGTCA
TTGTTCTTAGGAGGAAAGAGGAGAAGGAGGAGCTGCGGACGCCGACGACGAGCCAGCCGT
CGACGGCATGGATGCCGCTCCTCGGCCGGATCAGCTTCCGCAGCGCGCCGCCGAGCGCCG
TCGGGTCACGGTCGCCCAGCTTCACCATTGACACCAACGCCAACACTCCAGGAGGAGGCG
CCACTCCCGGCATGGCCGCGGCGGCCTCGTCTTCCCCGAGCTACCGCTTCCCGTTCGCCG
CGCTGCAGGACGCGACGGGCAACTTCGACGAGGGCCTCGTCATCGGCGAGGGCGGGTTCG
GGAAGGTGTACGCCGCCGTGCTCCAGGACGGCACCAAGGTCGCCGTGAAGCGCGCGAACC
CGGAGTCGCGGCAGGGCGCGCGGGAGTTCCGCACGGAGATCGAGATGCTCTCCGGCCTGC
GCCACCGTCACCTCGTCTCCCTCATCGGCTACTGCGACGAGCAGGATGAGATGATCCTGC
TCTACGAGTACATGGAGCACGGCTCGCTGCGGAGCCGCCTGTACGGCGGCGGCGCGGCGA
CGGCGACGGCGACGGCGCTCAGCTGGGCGCAGCGGCTGGAGGCATGCGCCGGCGCGGCGA
GGGGGCTCCTCTACCTGCACACGGCCACCGCCAAGCCGGTGATTCACCGCGACGTCAAGT
CGTCGAACATCTTGCTCGACGACGGCCTCACGGCGAAGGTCGCCGACTTCGGCCTCTCCA
AGGCCGGGCCGGACATGGACGAGACGCACGTCAGCACGGCGGTGAAGGGGAGCTTCGGCT
ACGTGGACCCGGAGTACGTGAGGACGAGGAAGCTCACCGCCAAGTCCGACGTCTACTCGT
TCGGCGTCGTGCTCCTCGAGGCGCTGTGCGCGCGCCCCGTCGTCGACCCGAGGTTGCCCA
AGCCGATGGTGAACCTCGTCGAGTGGGGGTTGCACTGGCAGCGGAGGGACGAGCTGGAGA
AGATCGTCGACCGGCGGATCGCCGGGACGGTGAGGCCCGCCGCGCTGAGGAAGTACGGCG
AGACGGTGGCCAGGTGCCTCGCCGACCGCGGCGCCGACCGGCCGGCGATGGAGGACGTCG
TGTGGAGCCTGCAGTTCGTGGCGCGGCTGCAGGAGGTGGACGGCCTCGACGCCTCCGACG
TGAGCAGCCTCAACATGGTTCATCAGCTGATGCCGCCGACGAGCTTGCACGCTCGTCAGA
GAAGCGCCGGCGAAAGCGAGACCGGCAGGACGGACGCCGACGAGGACAGCAGTGTGGTAG
ATGATGATTACACCGATGCTTCCATGAGAGGAATCTTCTGGCAAATGGTCAATGTGCGCG
GGAGATGATACTGATCAGTCATCTTCAAACATTCCAGATCATGAATTAGTCATCTTCAGA
CTGGTCAGTTCATTGTTGAACATTCCAGGTCAAAATTCACCTCTCCAGTATCCAGTCGGA
AAAAGTGAACAAAGACATACTTAGAATTTAAAATATACTTACCAGTGAAAATTTTGTACT
GTCCCTACAATGGAGTTCAAACATAT

consensusID : consensus_4070#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 809
fasta sequence 
                              [CTTTCTTCTCCTTGTGTTTGTGTGTGAGCTTCTCAAAACACGTGAGCCGTGAGCTCCTCGTTTGGATATATACGTTCTTTGATTTAGTTTCTATTGACTGTCTTCTACCTTTCTTCTATCTGGTGTTCTCTTATGTTGTACTAGCTGTTTCGGACAAGGAAAAACTGAAGCTTTTCCAGAGCTTCCTGCAAAGGTACTCATCATCAATTGTGCCATCCAAATTGAAGTTCAAATTTCCACTGCCAAGATGATCAAACTCCGGTCAGCTCTAGGCGTTCTTGAGATCTTGTCAGTTCTTTGCATCAGCCTTGTTGCTGCATACACTCCAGTAGACAACTACCTCATCAGCTGCGGCTCATCGGTCGACACGCCGGTTGGCCAGCGGCTGTTCGTCGCCGACGACTCGGGCACGGTCGTCCTGACATCTCCGGCGAGTGACGCGGTGAAAGCCTCGCCCAGCGCGGTGTCCGGGTTGCGCGACGACGCCGCCATGTACCAGAGCGCCAGGGTGTTCAAGGCGCCGTCGTCCTACTCGTTCCGGATCAGGGACCCCGGCCGCCACTTCGTCCGCCTCCACTTCTTCCCCTTCGTGTACCTCGGCTACGACCTCGCCACGGCGAGCTTCAAGGTGTCGACGCAGGACGCCGTCCTGCTCGACGGCTTCGCGCCGGCGGCGGCGGCGAGGGGCAACGCGTCGACGACGACGACGACTGCGACGGCGGCGGCGGTGTGCGAGGAGTTCCTGCTGGACGTGGCGCGCGACACGCTCGTCGTCACGTTCGTGCCGCTCGCCGGCAGGCTCGCGATCG]

[+] EMBL CB675892             [CTTTCTTCTCCTTGTGTTTGTGTGTGAGCTTCTCAAAACACGTGAGCCGTGAGCTCCTCGTTTGGATATATACGTTCTTTGATTTAGTTTCTATTGACTGTCTTCTACCTTTCTTCTATCTGGTGTTCTCTTATGTTGTACTAGCTGTTTCGGACAAGGAAAAACTGAAGCTTTTCCAGAGCTTCCTGCAAAGGTACTCATCATCAATTGTGCCATCCAAATTGAAGTTCAAATTTCCACTGCCAAGATGATCAAACTCCGGTCAGCTCTAGGCGTTCTTGAGATCTTGTCAGTTCTTTGCATCAGCCTTGTTGCTGCATACACTCCAGTAGACAACTACCTCATCAGCTGCGGCTCATCGGTCGACACGCCGGTTGGCCAGCGGCTGTTCGTCGCCGACGACTCGGGCACGGTCGTCCTGACATCTCCGGCGAGTGACGCGGTGAAAGCCTCGCCCAGCGCGGTGTCCGGGTTGCGCGACGACGCCGCCATGTACCAGAGCGCCAGGGTGTTCAAGGCGCCGTCGTCCTACTCGTTCCGGATCAGGGACCCCGGCCGCCACTTCGTCCGCCTCCACTTCTTCCCCTTCGTGTACCTCGGCTACGACCTCGCCACGGCGAGCTTCAAGGTGTCGACGCAGGACGCCGTCCTGCTCGACGGCTTCGCGCCGGCGGCGGCGGCGAGGGGCAACGCGTCGACGACGACGACGACTGCGACGGCGGCGGCGGTGTGCGAGGAGTTCCTGCTGGACGTGGCGCGCGACACGCTCGTCGTCACGTTCGTGCCGCTCGCCGGCAGGCTCGCGATCG]




>consensus_4070#1
CTTTCTTCTCCTTGTGTTTGTGTGTGAGCTTCTCAAAACACGTGAGCCGTGAGCTCCTCG
TTTGGATATATACGTTCTTTGATTTAGTTTCTATTGACTGTCTTCTACCTTTCTTCTATC
TGGTGTTCTCTTATGTTGTACTAGCTGTTTCGGACAAGGAAAAACTGAAGCTTTTCCAGA
GCTTCCTGCAAAGGTACTCATCATCAATTGTGCCATCCAAATTGAAGTTCAAATTTCCAC
TGCCAAGATGATCAAACTCCGGTCAGCTCTAGGCGTTCTTGAGATCTTGTCAGTTCTTTG
CATCAGCCTTGTTGCTGCATACACTCCAGTAGACAACTACCTCATCAGCTGCGGCTCATC
GGTCGACACGCCGGTTGGCCAGCGGCTGTTCGTCGCCGACGACTCGGGCACGGTCGTCCT
GACATCTCCGGCGAGTGACGCGGTGAAAGCCTCGCCCAGCGCGGTGTCCGGGTTGCGCGA
CGACGCCGCCATGTACCAGAGCGCCAGGGTGTTCAAGGCGCCGTCGTCCTACTCGTTCCG
GATCAGGGACCCCGGCCGCCACTTCGTCCGCCTCCACTTCTTCCCCTTCGTGTACCTCGG
CTACGACCTCGCCACGGCGAGCTTCAAGGTGTCGACGCAGGACGCCGTCCTGCTCGACGG
CTTCGCGCCGGCGGCGGCGGCGAGGGGCAACGCGTCGACGACGACGACGACTGCGACGGC
GGCGGCGGTGTGCGAGGAGTTCCTGCTGGACGTGGCGCGCGACACGCTCGTCGTCACGTT
CGTGCCGCTCGCCGGCAGGCTCGCGATCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4070#0      -------------------------------TTTCATACCCTCGAGAGGAAAAGGCCACC 29
consensus_4070#1      CTTTCTTCTCCTTGTGTTTGTGTGTGAGCTTCTCAAAACACGTGAGCCGTGAGCTCCTCG 60
                                                      *  * ** *  ***  *  *   ** * 

consensus_4070#0      -----ATGCTTCCGATTTCTAACACAAAAGTC-TCAAGAAAAAACGAGTCTTGAGAGAAA 83
consensus_4070#1      TTTGGATATATACGTTCTTTGATTTAGTTTCTATTGACTGTCTTCTACCTTTCTTCTATC 120
                           **   * ** * * * *   *       *  *       * *   **     *  

consensus_4070#0      ACGAGTT-------GTAGCACAAGCTGTTTCGGACAAGGAAAAACTGAAGCTTTTCCAGA 136
consensus_4070#1      TGGTGTTCTCTTATGTTGTACTAGCTGTTTCGGACAAGGAAAAACTGAAGCTTTTCCAGA 180
                        * ***       ** * ** **************************************

consensus_4070#0      GCTTCCTGCAAAGGTACTCATCATCAATTGTGCCATCCAAATTGAAGTTCAAATTTCCAC 196
consensus_4070#1      GCTTCCTGCAAAGGTACTCATCATCAATTGTGCCATCCAAATTGAAGTTCAAATTTCCAC 240
                      ************************************************************

consensus_4070#0      TGCCAAGATGATCAAACTCCGGTCAGCTCTAGGCGTTCTTGAGATCTTGTCAGTTCTTTG 256
consensus_4070#1      TGCCAAGATGATCAAACTCCGGTCAGCTCTAGGCGTTCTTGAGATCTTGTCAGTTCTTTG 300
                      ************************************************************

consensus_4070#0      CATCAGCCTTGTTGCTGCATACACTCCAGTAGACAACTACCTCATCAGCTGCGGCTCATC 316
consensus_4070#1      CATCAGCCTTGTTGCTGCATACACTCCAGTAGACAACTACCTCATCAGCTGCGGCTCATC 360
                      ************************************************************

consensus_4070#0      GGTCGACACGCCGGTTGGCCAGCGGCTGTTCGTCGCCGACGACTCGGGCACGGTCGTCCT 376
consensus_4070#1      GGTCGACACGCCGGTTGGCCAGCGGCTGTTCGTCGCCGACGACTCGGGCACGGTCGTCCT 420
                      ************************************************************

consensus_4070#0      GACATCTCCGGCGAGTGACGCGGTGAAAGCCTCGCCCAGCGCGGTGTCCGGGTTGCGCGA 436
consensus_4070#1      GACATCTCCGGCGAGTGACGCGGTGAAAGCCTCGCCCAGCGCGGTGTCCGGGTTGCGCGA 480
                      ************************************************************

consensus_4070#0      CGACGCCGCCATGTACCAGAGCGCCAGGGTGTTCATGGCGCCGTCGTCCTACTCGTTCCG 496
consensus_4070#1      CGACGCCGCCATGTACCAGAGCGCCAGGGTGTTCAAGGCGCCGTCGTCCTACTCGTTCCG 540
                      *********************************** ************************

consensus_4070#0      GATCAGGGACCCCGGCCGCCACTTCGTCCGCCTCCACTTCTTCCCCTTCGTGTACCTCGG 556
consensus_4070#1      GATCAGGGACCCCGGCCGCCACTTCGTCCGCCTCCACTTCTTCCCCTTCGTGTACCTCGG 600
                      ************************************************************

consensus_4070#0      CTACGACCTCGCCACGGCGAGCTTCAAGGTGTCGACGCAGGACGCCGTCCTGCTCGACGG 616
consensus_4070#1      CTACGACCTCGCCACGGCGAGCTTCAAGGTGTCGACGCAGGACGCCGTCCTGCTCGACGG 660
                      ************************************************************

consensus_4070#0      CTTCGCGCCGGCGGCGGCGGCGAGGGGCAACGCGTCGACGACGACGACGACGGCGACGGC 676
consensus_4070#1      CTTCGCGCCGGCGGCGGCGGCGAGGGGCAACGCGTCGACGACGACGACGACTGCGACGGC 720
                      *************************************************** ********

consensus_4070#0      GGCGGCGGTGTGCGAGGAGTTCCTGCTGGACGTGGCGCGCGACACGCTCGTCGTCACGTT 736
consensus_4070#1      GGCGGCGGTGTGCGAGGAGTTCCTGCTGGACGTGGCGCGCGACACGCTCGTCGTCACGTT 780
                      ************************************************************

consensus_4070#0      CGTGCCGCTCGCCGGCAGGCTCGCGTTCGTCAACGCCATCGAGGTCGTCTCGGTCCCCGA 796
consensus_4070#1      CGTGCCGCTCGCCGGCAGGCTCGCGATCG------------------------------- 809
                      ************************* ***                               

consensus_4070#0      CGACCTCATCGGCGCTGCTGACTCGTCGCTGTCGACGTCCGACTCCACTGGCCAGCAGCT 856
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      CAACCCTGCCGTGATGCCGCTGCAAACGGTCTATCGGGTCAATGTGGGCGGCCAAGCGGT 916
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      GGCGCCCGACAGCGACACGCTCTGGCGAGAATGGACTAGTGACCAGCAATTATTGGTTGG 976
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      ACCCGCAATGACTAAAGGAGTTTCTTACAATCGAACACCGAACTACCTGCCCGGGCAAGC 1036
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      GACGGCGAACGACGCACCGGCCATCGTCTACGCCACCGGCAGGGAGCTTATCATCATGAC 1096
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      GAACTCGACGGACGACGGCATGAAACAAATGGCGTGGCAGTTCGACGTCGGCAGGTCGGC 1156
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      GAGCTACCTGATCAGGTTCCACTTCTGTGACATCGTGAGCAGCGTGCCTGGCCGCCTCCA 1216
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      CATGAACGCCTATGTCGACAGCTCCAACGCGATTCAAGATCTCGACCTCTCCGCCATTGG 1276
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      CAATGGCACGCTGGCGTTCCCGTATTACAGAGACTTCGTGCTGGCTGCTAGCACTCCATC 1336
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      CGGCAAGCTCGCCGTCTACGTTGGGTCGACGTCGCAGAAGATCACGACACCTGCCGCCAT 1396
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      TCTCAATGGCCTAGAGATCATGAGGATACTCACGACCGCCGGCAACGTCGCCGTCGTCGA 1456
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      GCCAACGATGCCGCCGGGAACGAAGAAGAAGAACAATTTGGCCGTCGTTCTTGGCTCAGT 1516
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      CTGTGGAGCTTTCGGTTTCGTTTCCGTCGCCGCTGCTCTTGTCATTGTTCTTAGGAGGAA 1576
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      AGAGGAGAAGGAGGAGCTGCGGACGCCGACGACGAGCCAGCCGTCGACGGCATGGATGCC 1636
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      GCTCCTCGGCCGGATCAGCTTCCGCAGCGCGCCGCCGAGCGCCGTCGGGTCACGGTCGCC 1696
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      CAGCTTCACCATTGACACCAACGCCAACACTCCAGGAGGAGGCGCCACTCCCGGCATGGC 1756
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      CGCGGCGGCCTCGTCTTCCCCGAGCTACCGCTTCCCGTTCGCCGCGCTGCAGGACGCGAC 1816
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      GGGCAACTTCGACGAGGGCCTCGTCATCGGCGAGGGCGGGTTCGGGAAGGTGTACGCCGC 1876
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      CGTGCTCCAGGACGGCACCAAGGTCGCCGTGAAGCGCGCGAACCCGGAGTCGCGGCAGGG 1936
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      CGCGCGGGAGTTCCGCACGGAGATCGAGATGCTCTCCGGCCTGCGCCACCGTCACCTCGT 1996
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      CTCCCTCATCGGCTACTGCGACGAGCAGGATGAGATGATCCTGCTCTACGAGTACATGGA 2056
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      GCACGGCTCGCTGCGGAGCCGCCTGTACGGCGGCGGCGCGGCGACGGCGACGGCGACGGC 2116
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      GCTCAGCTGGGCGCAGCGGCTGGAGGCATGCGCCGGCGCGGCGAGGGGGCTCCTCTACCT 2176
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      GCACACGGCCACCGCCAAGCCGGTGATTCACCGCGACGTCAAGTCGTCGAACATCTTGCT 2236
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      CGACGACGGCCTCACGGCGAAGGTCGCCGACTTCGGCCTCTCCAAGGCCGGGCCGGACAT 2296
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      GGACGAGACGCACGTCAGCACGGCGGTGAAGGGGAGCTTCGGCTACGTGGACCCGGAGTA 2356
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      CGTGAGGACGAGGAAGCTCACCGCCAAGTCCGACGTCTACTCGTTCGGCGTCGTGCTCCT 2416
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      CGAGGCGCTGTGCGCGCGCCCCGTCGTCGACCCGAGGTTGCCCAAGCCGATGGTGAACCT 2476
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      CGTCGAGTGGGGGTTGCACTGGCAGCGGAGGGACGAGCTGGAGAAGATCGTCGACCGGCG 2536
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      GATCGCCGGGACGGTGAGGCCCGCCGCGCTGAGGAAGTACGGCGAGACGGTGGCCAGGTG 2596
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      CCTCGCCGACCGCGGCGCCGACCGGCCGGCGATGGAGGACGTCGTGTGGAGCCTGCAGTT 2656
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      CGTGGCGCGGCTGCAGGAGGTGGACGGCCTCGACGCCTCCGACGTGAGCAGCCTCAACAT 2716
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      GGTTCATCAGCTGATGCCGCCGACGAGCTTGCACGCTCGTCAGAGAAGCGCCGGCGAAAG 2776
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      CGAGACCGGCAGGACGGACGCCGACGAGGACAGCAGTGTGGTAGATGATGATTACACCGA 2836
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      TGCTTCCATGAGAGGAATCTTCTGGCAAATGGTCAATGTGCGCGGGAGATGATACTGATC 2896
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      AGTCATCTTCAAACATTCCAGATCATGAATTAGTCATCTTCAGACTGGTCAGTTCATTGT 2956
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      TGAACATTCCAGGTCAAAATTCACCTCTCCAGTATCCAGTCGGAAAAAGTGAACAAAGAC 3016
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      ATACTTAGAATTTAAAATATACTTACCAGTGAAAATTTTGTACTGTCCCTACAATGGAGT 3076
consensus_4070#1      ------------------------------------------------------------
                                                                                  

consensus_4070#0      TCAAACATAT 3086
consensus_4070#1      ----------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)