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Oryza sativa
cluster # 4464 cluster # 4464       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4464#0 length = 3665 sequences # 2  
 consensus_4464#1 length = 422 sequences # 1  
consensusID : consensus_4464#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3665
fasta sequence 
                              [CTGCAGCCGCGGCTGCTACTGCTACACGCAACCAACCCCCTCACACACACAGTCACCGCAACGCAAGGAGAAAAAAGCAGCGAAGCGGAGGAAGAGAGAAAGAAAGCGACGCTGCTTTTTCTTCTTTCTTTCTTCCAACCACTCCGGGATCGGGGAGCGAATCAAATATCATTCGCCGAGGGTGCTGGAGGAGAGAGAGGCCAACGGTCTCACAATGCAGGGGCAGCATCTAAACAGCCAGACTGTGGATCTTGCCCGCAATCTTCGGGAAAACCAGCTAGGAGGAGTGATATTTGGTTGCAAGCACAATACAATCGAGGAATGCTTCGAAAAACAGCTATTTGGTCTGCCTTCAGTCCACTATTCATATGTGAGAAATGTGAAACCTGGACTACCTTTATTCCTATTCAATTATAGTGACAGAAAGCTTCATGGCATTTTCGAGGCTGCAAGTCCTGGGCAGATGTGTATTGATCCATATGCGTGGAGTCATGATGGTTCTTTGAGGACTTCTTTTCCTGCACAGGTTCGTATCTGCACGAAGACTCGTTATCCACCATTGATGGAGAGCCAATTCAGAACAGTGCTTGGTGACAACTATTATAACCACCACCACTTCTATTTTGAGCTAGACCATGCCCAAACAAAAGCTTTGATTGCTGTGTTCAAATCACTTGCTCCTGCCAATTTCACGCAAGTTCCAGCGGTTTCGAGCAAAAGGACTATTGCACCTTTACCATCAACTAAAAGGCAGGCACCTGTTATCCCTGACCAAAAGAAAGGGTCAGCCAGTCCAAAGGACATCAATCCGTTTAGTGTTCTGTCACAATCAGGTGGTGCTGTTAAAGATAACTGGGCTGATTCTGATGTGGAGAATGGCAGTATTAGCAGAAGTTCAGATGAGAAGGAATCTAGGGAGCTAGTTTCTGATTGGGAGGATTTGGATGACAATGTTCTTCACGGCCAACTTGGTCTTTGTTCAAATCCAGATGAGATCAGTCAAAACTCCTCATACAACAGTGTTGCTAAGGGAGCGGAGTTTGTGGAATGCAGTCATTTGGTTGTCAATCCTGTGAATGGAGGAATCCAAAGTTCTGATGGAGACATGCTTGTGATCTCAGATGATGTGCATTCAGGTGCTGTGGGTGTTGATGGGATAGAGAGTGGGGGTCAGAATGAACCAGATGATGTCTCGATACAGCCTGAAAGACTGTCCATCCTGCAAAAACTTAAGGAGTTGTTTGTTCTACGACAACAGGCAGTGCTATCTGATCAAAATCTTGCATATTCTAATTCAGATGAATATGCACCTGAAGAAACACAGGCCAATGTGAGCCTTTCTTGTCCAGAGCAATGTGCACCTGAAGAACCACAGGCCAATACAACCCCTTCTTGTCCAGAGCTACATGTACTTGAAGAAACACAGGCCAATGTGAGCCTTCTTTGTCCAGAGCAATATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACATGTGCTTGAAGAAACACAGCCCAATGTGAGCCTTCCTTGTCCAGGGCAATATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACATATACCTGAAGAAATACAAGCCAATGCAAGCCTTCCTTGTCCAGATCAGCATGTACCTGAAGAACCACAGGATGATGCAAGTTTTTCTTGTCCAGAGCAACATGTACCTGAAGAAACACAGACCAATGCAAGCCTTCCTTGTCCAGATCAGCATGTACCTGAAGAAACACAGGATGATGCAAGCTTTTCTTGTCCAGAGCAACATGTACCTGAAGAAACACAGGCCAATGCAAGCCTTCCTTGTCCTGGCCAGCATGTACCTGACAATGCAAGCCTTCCTTGTCCAGAGCAACATGTGCCTGAAGAAACACAGATCAATGCAGGTCTTTCTTGTCCAGATCAGCATCTTCCCGAAGAAACAAAGTTCAATGTCAGTCTTGCCTATCCAGATCAGCATGTACCAGAGGAAACACAGGTCACTGCAGGCATTTCTTGCCCAGATCAGCATGTTCCTGAAGAAACACAGGTCAATGCAAGCCTTCCCTCTCCAAATCAGCATGTACCAGAAGAAACAAAGGCCACCGCAGCCATTTCTTGTCCAGATCAACATGTAACACAGGCCAATGCAAGCCTTTCTCAACACGAGTTCGGTGCTAAGGTGGAAGATAATACATCTCTTGAGCAAAATCAAGGAAATGCTGAGCTGATAAAAATCGTCCTTGGCTTAATCAAGAAGACTGATTCATTGGATATGAGACAGAACAAGTCCCATGAAGAAATACTTTCTCTGAAGGAAGTAGTTAAAGACTCGGGAACAAAAGTAAAGCAACTGGAATACCGTATAGATGAGTTACAATTCAAACTTGACTCTTCACTGTCTCTTGTCGGAGATGCATGTGATACTCTGGACAAGCCATCGATATTCCTGATAGGTGGTTATAATGGTGTGTCCTGGTTGTCATCTCTTGATGCTTTTTCACCTGAGAAAGACATACTGGTGCCTCTCGCACCATTGAGTTCTGCTCGTTCATATGCATCTGTTGCTACATTGGAGGGTTGCATATTCGTCTGTGGTGGTGGGGTTGGCGATTCATTTGGTAACACAGTGGAATGCTATAATACAATGTGTAACGAGTGGATGGCGTGCCCCCTGTTTGAACAATAAAAAGGGAAGTCTCGCTGCAGTAAGTCTGGATGGAAAAGTATATGCTATTGGTGGAGGAGATGGAATTGTAACTTATTCAGATGTTGAGATGTTTGATCCTTTTCTTGGGAAGTGGATATGCAGCCCGTCTATGATGAACTCTCGATTTGCTCTTGGTGCGGCAGAAATGAACAGTGTCATCTATGCTACTGGTGGATTTGATGGTTTCAGCTACTTACAATCAGCAGAAAGGTATGGCCCAAGGGAGGGTTTCTGGGCCCGGCTTCCAAGTATGAATGTAAGGAGAGGATGCCACACTGTAGCTGCCCTTGGAGGAGTCCTGTATGCCATTGGAGGGTATAATGGGGATAGAATGGTGTCTAGCGTAGAGATCTTTGGCCCACGTCGCAACTCCTGGAGGGTGGGTGATCCCATGAACTTTCCAAGAGGATACGCCTCTACAGTTACCCTGGGTGACAATGTGTTTGTCATTGGCGGTCTACAGTCGAGTGAAAAGTTTATGGATTCTGTGGAAGTTTACAATGTGAAATGCGGCTGGTCAGTTCCTGGTTTCAGCTCGATTGGGGTGAGGTGCTTCGCGTCTGCTGCTGTCGTTTAAGCGTGTTAGAAGTACAGTGCTTGTCCCATCTCATCAGTTCTAACAATTTTGTGCCATGCAAGGAAACAAACCCTAATCGTGTTTTCCGACATTTTGAGGGTAAAAATTGCCCTTCTGCTGTGATTCCAGTTTCGTGTACAGCGAAAGTCAGCATAGTATGGAGCTCTAGGTAGTCAGTCACTTGTCCAAAGTTTAGATCCTCATTTATATACCTGAATATTCACCTACTGTTGAGAAACACCCTGTTTTATCAGGTACCATGTAAATCTCTTGGAATGCATTCCGGCTAAAAATTCTGAA]

[+] EMBL AK072587             [CTGCAGCCGCGGCTGCTACTGCTACACGCAACCAACCCCCTCACACACACAGTCACCGCAACGCAAGGAGAAAAAAGCAGCGAAGCGGAGGAAGAGAGAAAGAAAGCGACGCTGCTTTTTCTTCTTTCTTTCTTCCAACCACTCCGGGATCGGGGAGCGAATCAAATATCATTCGCCGAGGGTGCTGGAGGAGAGAGAGGCCAACGGTCTCACAATGCAGGGGCAGCATCTAAACAGCCAGACTGTGGATCTTGCCCGCAATCTTCGGGAAAACCAGCTAGGAGGAGTGATATTTGGTTGCAAGCACAATACAATCGAGGAATGCTTCGAAAAACAGCTATTTGGTCTGCCTTCAGTCCACTATTCATATGTGAGAAATGTGAAACCTGGACTACCTTTATTCCTATTCAATTATAGTGACAGAAAGCTTCATGGCATTTTCGAGGCTGCAAGTCCTGGGCAGATGTGTATTGATCCATATGCGTGGAGTCATGATGGTTCTTTGAGGACTTCTTTTCCTGCACAGGTTCGTATCTGCACGAAGACTCGTTATCCACCATTGATGGAGAGCCAATTCAGAACAGTGCTTGGTGACAACTATTATAACCACCACCACTTCTATTTTGAGCTAGACCATGCCCAAACAAAAGCTTTGATTGCTGTGTTCAAATCACTTGCTCCTGCCAATTTCACGCAAGTTCCAGCGGTTTCGAGCAAAAGGACTATTGCACCTTTACCATCAACTAAAAGGCAGGCACCTGTTATCCCTGACCAAAAGAAAGGGTCAGCCAGTCCAAAGGACATCAATCCGTTTAGTGTTCTGTCACAATCAGGTGGTGCTGTTAAAGATAACTGGGCTGATTCTGATGTGGAGAATGGCAGTATTAGCAGAAGTTCAGATGAGAAGGAATCTAGGGAGCTAGTTTCTGATTGGGAGGATTTGGATGACAATGTTCTTCACGGCCAACTTGGTCTTTGTTCAAATCCAGATGAGATCAGTCAAAACTCCTCATACAACAGTGTTGCTAAGGGAGCGGAGTTTGTGGAATGCAGTCATTTGGTTGTCAATCCTGTGAATGGAGGAATCCAAAGTTCTGATGGAGACATGCTTGTGATCTCAGATGATGTGCATTCAGGTGCTGTGGGTGTTGATGGGATAGAGAGTGGGGGTCAGAATGAACCAGATGATGTCTCGATACAGCCTGAAAGACTGTCCATCCTGCAAAAACTTAAGGAGTTGTTTGTTCTACGACAACAGGCAGTGCTATCTGATCAAAATCTTGCATATTCTAATTCAGATGAATATGCACCTGAAGAAACACAGGCCAATGTGAGCCTTTCTTGTCCAGAGCAATGTGCACCTGAAGAACCACAGGCCAATACAACCCCTTCTTGTCCAGAGCTACATGTACTTGAAGAAACACAGGCCAATGTGAGCCTTCTTTGTCCAGAGCAATATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACATGTGCTTGAAGAAACACAGCCCAATGTGAGCCTTCCTTGTCCAGGGCAATATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACATATACCTGAAGAAATACAAGCCAATGCAAGCCTTCCTTGTCCAGATCAGCATGTACCTGAAGAACCACAGGATGATGCAAGTTTTTCTTGTCCAGAGCAACATGTACCTGAAGAAACACAGACCAATGCAAGCCTTCCTTGTCCAGATCAGCATGTACCTGAAGAAACACAGGATGATGCAAGCTTTTCTTGTCCAGAGCAACATGTACCTGAAGAAACACAGGCCAATGCAAGCCTTCCTTGTCCTGGCCAGCATGTACCTGACAATGCAAGCCTTCCTTGTCCAGAGCAACATGTGCCTGAAGAAACACAGATCAATGCAGGTCTTTCTTGTCCAGATCAGCATCTTCCCGAAGAAACAAAGTTCAATGTCAGTCTTGCCTATCCAGATCAGCATGTACCAGAGGAAACACAGGTCACTGCAGGCATTTCTTGCCCAGATCAGCATGTTCCTGAAGAAACACAGGTCAATGCAAGCCTTCCCTCTCCAAATCAGCATGTACCAGAAGAAACAAAGGCCACCGCAGCCATTTCTTGTCCAGATCAACATGTAACACAGGCCAATGCAAGCCTTTCTCAACACGAGTTCGGTGCTAAGGTGGAAGATAATACATCTCTTGAGCAAAATCAAGGAAATGCTGAGCTGATAAAAATCGTCCTTGGCTTAATCAAGAAGACTGATTCATTGGATATGAGACAGAACAAGTCCCATGAAGAAATACTTTCTCTGAAGGAAGTAGTTAAAGACTCGGGAACAAAAGTAAAGCAACTGGAATACCGTATAGATGAGTTACAATTCAAACTTGACTCTTCACTGTCTCTTGTCGGAGATGCATGTGATACTCTGGACAAGCCATCGATATTCCTGATAGGTGGTTATAATGGTGTGTCCTGGTTGTCATCTCTTGATGCTTTTTCACCTGAGAAAGACATACTGGTGCCTCTCGCACCATTGAGTTCTGCTCGTTCATATGCATCTGTTGCTACATTGGAGGGTTGCATATTCGTCTGTGGTGGTGGGGTTGGCGATTCATTTGGTAACACAGTGGAATGCTATAATACAATGTGTAACGAGTGGATGGCGTGCCCCCTGTTTGAACAATAAAAAGGGAAGTCTCGCTGCAGTAAGTCTGGATGGAAAAGTATATGCTATTGGTGGAGGAGATGGAATTGTAACTTATTCAGATGTTGAGATGTTTGATCCTTTTCTTGGGAAGTGGATATGCAGCCCGTCTATGATGAACTCTCGATTTGCTCTTGGTGCGGCAGAAATGAACAGTGTCATCTATGCTACTGGTGGATTTGATGGTTTCAGCTACTTACAATCAGCAGAAAGGTATGGCCCAAGGGAGGGTTTCTGGGCCCGGCTTCCAAGTATGAATGTAAGGAGAGGATGCCACACTGTAGCTGCCCTTGGAGGAGTCCTGTATGCCATTGGAGGGTATAATGGGGATAGAATGGTGTCTAGCGTAGAGATCTTTGGCCCACGTCGCAACTCCTGGAGGGTGGGTGATCCCATGAACTTTCCAAGAGGATACGCCTCTACAGTTACCCTGGGTGACAATGTGTTTGTCATTGGCGGTCTACAGTCGAGTGAAAAGTTTATGGATTCTGTGGAAGTTTACAATGTGAAATGCGGCTGGTCAGTTCCTGGTTTCAGCTCGATTGGGGTGAGGTGCTTCGCGTCTGCTGCTGTCGTTTAAGCGTGTTAGAAGTACAGTGCTTGTCCCATCTCATCAGTTCTAACAATTTTGTGCCATGCAAGGAAACAAACCCTAATCGTGTTTTCCGACATTTTGAGGGTAAAAATTGCCCTTCTGCTGTGATTCCAGTTTCGTGTACAGCGAAAGTCAGCATAGTATGGAGCTCTAGGTAGTCAGTCACTTGTCCAAAGTTTAGATCCTCATTTATATACCTGAATATTCACCTACTGTTGAGAAACACCCTGTTTTATCAGGTACCATGTAAATCTCTTGGAATGCATTCCGGCTAAAAATTCTGAA]
[+] EMBL CF324586             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCTGAAGGAAGTAGTTAAAGACTCGGGAACAAAAGTAAAGCAACTGGAATACCGTATAGATGAGTTACAATTCAAACTTGACTCTTCACTGTCTCTTGTCGGAGATGCATGTGATACTCTGGACAAGCCATCGATATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]




>consensus_4464#0
CTGCAGCCGCGGCTGCTACTGCTACACGCAACCAACCCCCTCACACACACAGTCACCGCA
ACGCAAGGAGAAAAAAGCAGCGAAGCGGAGGAAGAGAGAAAGAAAGCGACGCTGCTTTTT
CTTCTTTCTTTCTTCCAACCACTCCGGGATCGGGGAGCGAATCAAATATCATTCGCCGAG
GGTGCTGGAGGAGAGAGAGGCCAACGGTCTCACAATGCAGGGGCAGCATCTAAACAGCCA
GACTGTGGATCTTGCCCGCAATCTTCGGGAAAACCAGCTAGGAGGAGTGATATTTGGTTG
CAAGCACAATACAATCGAGGAATGCTTCGAAAAACAGCTATTTGGTCTGCCTTCAGTCCA
CTATTCATATGTGAGAAATGTGAAACCTGGACTACCTTTATTCCTATTCAATTATAGTGA
CAGAAAGCTTCATGGCATTTTCGAGGCTGCAAGTCCTGGGCAGATGTGTATTGATCCATA
TGCGTGGAGTCATGATGGTTCTTTGAGGACTTCTTTTCCTGCACAGGTTCGTATCTGCAC
GAAGACTCGTTATCCACCATTGATGGAGAGCCAATTCAGAACAGTGCTTGGTGACAACTA
TTATAACCACCACCACTTCTATTTTGAGCTAGACCATGCCCAAACAAAAGCTTTGATTGC
TGTGTTCAAATCACTTGCTCCTGCCAATTTCACGCAAGTTCCAGCGGTTTCGAGCAAAAG
GACTATTGCACCTTTACCATCAACTAAAAGGCAGGCACCTGTTATCCCTGACCAAAAGAA
AGGGTCAGCCAGTCCAAAGGACATCAATCCGTTTAGTGTTCTGTCACAATCAGGTGGTGC
TGTTAAAGATAACTGGGCTGATTCTGATGTGGAGAATGGCAGTATTAGCAGAAGTTCAGA
TGAGAAGGAATCTAGGGAGCTAGTTTCTGATTGGGAGGATTTGGATGACAATGTTCTTCA
CGGCCAACTTGGTCTTTGTTCAAATCCAGATGAGATCAGTCAAAACTCCTCATACAACAG
TGTTGCTAAGGGAGCGGAGTTTGTGGAATGCAGTCATTTGGTTGTCAATCCTGTGAATGG
AGGAATCCAAAGTTCTGATGGAGACATGCTTGTGATCTCAGATGATGTGCATTCAGGTGC
TGTGGGTGTTGATGGGATAGAGAGTGGGGGTCAGAATGAACCAGATGATGTCTCGATACA
GCCTGAAAGACTGTCCATCCTGCAAAAACTTAAGGAGTTGTTTGTTCTACGACAACAGGC
AGTGCTATCTGATCAAAATCTTGCATATTCTAATTCAGATGAATATGCACCTGAAGAAAC
ACAGGCCAATGTGAGCCTTTCTTGTCCAGAGCAATGTGCACCTGAAGAACCACAGGCCAA
TACAACCCCTTCTTGTCCAGAGCTACATGTACTTGAAGAAACACAGGCCAATGTGAGCCT
TCTTTGTCCAGAGCAATATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCC
AGAGCAACATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACA
TGTGCTTGAAGAAACACAGCCCAATGTGAGCCTTCCTTGTCCAGGGCAATATGTACCTGA
AGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACATATACCTGAAGAAATACA
AGCCAATGCAAGCCTTCCTTGTCCAGATCAGCATGTACCTGAAGAACCACAGGATGATGC
AAGTTTTTCTTGTCCAGAGCAACATGTACCTGAAGAAACACAGACCAATGCAAGCCTTCC
TTGTCCAGATCAGCATGTACCTGAAGAAACACAGGATGATGCAAGCTTTTCTTGTCCAGA
GCAACATGTACCTGAAGAAACACAGGCCAATGCAAGCCTTCCTTGTCCTGGCCAGCATGT
ACCTGACAATGCAAGCCTTCCTTGTCCAGAGCAACATGTGCCTGAAGAAACACAGATCAA
TGCAGGTCTTTCTTGTCCAGATCAGCATCTTCCCGAAGAAACAAAGTTCAATGTCAGTCT
TGCCTATCCAGATCAGCATGTACCAGAGGAAACACAGGTCACTGCAGGCATTTCTTGCCC
AGATCAGCATGTTCCTGAAGAAACACAGGTCAATGCAAGCCTTCCCTCTCCAAATCAGCA
TGTACCAGAAGAAACAAAGGCCACCGCAGCCATTTCTTGTCCAGATCAACATGTAACACA
GGCCAATGCAAGCCTTTCTCAACACGAGTTCGGTGCTAAGGTGGAAGATAATACATCTCT
TGAGCAAAATCAAGGAAATGCTGAGCTGATAAAAATCGTCCTTGGCTTAATCAAGAAGAC
TGATTCATTGGATATGAGACAGAACAAGTCCCATGAAGAAATACTTTCTCTGAAGGAAGT
AGTTAAAGACTCGGGAACAAAAGTAAAGCAACTGGAATACCGTATAGATGAGTTACAATT
CAAACTTGACTCTTCACTGTCTCTTGTCGGAGATGCATGTGATACTCTGGACAAGCCATC
GATATTCCTGATAGGTGGTTATAATGGTGTGTCCTGGTTGTCATCTCTTGATGCTTTTTC
ACCTGAGAAAGACATACTGGTGCCTCTCGCACCATTGAGTTCTGCTCGTTCATATGCATC
TGTTGCTACATTGGAGGGTTGCATATTCGTCTGTGGTGGTGGGGTTGGCGATTCATTTGG
TAACACAGTGGAATGCTATAATACAATGTGTAACGAGTGGATGGCGTGCCCCCTGTTTGA
ACAATAAAAAGGGAAGTCTCGCTGCAGTAAGTCTGGATGGAAAAGTATATGCTATTGGTG
GAGGAGATGGAATTGTAACTTATTCAGATGTTGAGATGTTTGATCCTTTTCTTGGGAAGT
GGATATGCAGCCCGTCTATGATGAACTCTCGATTTGCTCTTGGTGCGGCAGAAATGAACA
GTGTCATCTATGCTACTGGTGGATTTGATGGTTTCAGCTACTTACAATCAGCAGAAAGGT
ATGGCCCAAGGGAGGGTTTCTGGGCCCGGCTTCCAAGTATGAATGTAAGGAGAGGATGCC
ACACTGTAGCTGCCCTTGGAGGAGTCCTGTATGCCATTGGAGGGTATAATGGGGATAGAA
TGGTGTCTAGCGTAGAGATCTTTGGCCCACGTCGCAACTCCTGGAGGGTGGGTGATCCCA
TGAACTTTCCAAGAGGATACGCCTCTACAGTTACCCTGGGTGACAATGTGTTTGTCATTG
GCGGTCTACAGTCGAGTGAAAAGTTTATGGATTCTGTGGAAGTTTACAATGTGAAATGCG
GCTGGTCAGTTCCTGGTTTCAGCTCGATTGGGGTGAGGTGCTTCGCGTCTGCTGCTGTCG
TTTAAGCGTGTTAGAAGTACAGTGCTTGTCCCATCTCATCAGTTCTAACAATTTTGTGCC
ATGCAAGGAAACAAACCCTAATCGTGTTTTCCGACATTTTGAGGGTAAAAATTGCCCTTC
TGCTGTGATTCCAGTTTCGTGTACAGCGAAAGTCAGCATAGTATGGAGCTCTAGGTAGTC
AGTCACTTGTCCAAAGTTTAGATCCTCATTTATATACCTGAATATTCACCTACTGTTGAG
AAACACCCTGTTTTATCAGGTACCATGTAAATCTCTTGGAATGCATTCCGGCTAAAAATT
CTGAA

consensusID : consensus_4464#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 422
fasta sequence 
                              [TCGAGTGAAAAGTTTATGGATTCTGTGGAAGTTTACAATGTGAAATGCGGCTGGTCAGTTCCTGGTTTCAGCTCGATTGGGGTGAGTGCTTCGCGTCTGCTGCTGTCGTTAAACGTGTTAAAATTCAATGCTTGTCCCCTCCCCTCAATTCTTAACAATTTTGTGGCCCTGCCCAAGAAACCAACCCCAATCCTGTTTTTCCCAAATTTTTGAAGGGTTAAAAATTGCCCCTTCTGCCGGTGAATCCCACTTTCCTGTTTCACCGAAATCCCCCCATATTTTGAACCCCCAGTTTATCCCCTTCTCCTTGTCCCCAAATTTTTAAATCCCCCCCCCTCATATTCCCCGAAAAATTCCCCCCCCCTCGGTTTAAAAACCCCCGGTTTTTAACAGGTTCCCAATTTTATCCCCCTCTGGGAATA]

[+] EMBL AA754179             [TCGAGTGAAAAGTTTATGGATTCTGTGGAAGTTTACAATGTGAAATGCGGCTGGTCAGTTCCTGGTTTCAGCTCGATTGGGGTGAGTGCTTCGCGTCTGCTGCTGTCGTTAAACGTGTTAAAATTCAATGCTTGTCCCCTCCCCTCAATTCTTAACAATTTTGTGGCCCTGCCCAAGAAACCAACCCCAATCCTGTTTTTCCCAAATTTTTGAAGGGTTAAAAATTGCCCCTTCTGCCGGTGAATCCCACTTTCCTGTTTCACCGAAATCCCCCCATATTTTGAACCCCCAGTTTATCCCCTTCTCCTTGTCCCCAAATTTTTAAATCCCCCCCCCTCATATTCCCCGAAAAATTCCCCCCCCCTCGGTTTAAAAACCCCCGGTTTTTAACAGGTTCCCAATTTTATCCCCCTCTGGGAATA]




>consensus_4464#1
TCGAGTGAAAAGTTTATGGATTCTGTGGAAGTTTACAATGTGAAATGCGGCTGGTCAGTT
CCTGGTTTCAGCTCGATTGGGGTGAGTGCTTCGCGTCTGCTGCTGTCGTTAAACGTGTTA
AAATTCAATGCTTGTCCCCTCCCCTCAATTCTTAACAATTTTGTGGCCCTGCCCAAGAAA
CCAACCCCAATCCTGTTTTTCCCAAATTTTTGAAGGGTTAAAAATTGCCCCTTCTGCCGG
TGAATCCCACTTTCCTGTTTCACCGAAATCCCCCCATATTTTGAACCCCCAGTTTATCCC
CTTCTCCTTGTCCCCAAATTTTTAAATCCCCCCCCCTCATATTCCCCGAAAAATTCCCCC
CCCCTCGGTTTAAAAACCCCCGGTTTTTAACAGGTTCCCAATTTTATCCCCCTCTGGGAA
TA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4464#0      CTGCAGCCGCGGCTGCTACTGCTACACGCAACCAACCCCCTCACACACACAGTCACCGCA 60
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      ACGCAAGGAGAAAAAAGCAGCGAAGCGGAGGAAGAGAGAAAGAAAGCGACGCTGCTTTTT 120
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      CTTCTTTCTTTCTTCCAACCACTCCGGGATCGGGGAGCGAATCAAATATCATTCGCCGAG 180
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      GGTGCTGGAGGAGAGAGAGGCCAACGGTCTCACAATGCAGGGGCAGCATCTAAACAGCCA 240
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      GACTGTGGATCTTGCCCGCAATCTTCGGGAAAACCAGCTAGGAGGAGTGATATTTGGTTG 300
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      CAAGCACAATACAATCGAGGAATGCTTCGAAAAACAGCTATTTGGTCTGCCTTCAGTCCA 360
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      CTATTCATATGTGAGAAATGTGAAACCTGGACTACCTTTATTCCTATTCAATTATAGTGA 420
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      CAGAAAGCTTCATGGCATTTTCGAGGCTGCAAGTCCTGGGCAGATGTGTATTGATCCATA 480
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TGCGTGGAGTCATGATGGTTCTTTGAGGACTTCTTTTCCTGCACAGGTTCGTATCTGCAC 540
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      GAAGACTCGTTATCCACCATTGATGGAGAGCCAATTCAGAACAGTGCTTGGTGACAACTA 600
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TTATAACCACCACCACTTCTATTTTGAGCTAGACCATGCCCAAACAAAAGCTTTGATTGC 660
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TGTGTTCAAATCACTTGCTCCTGCCAATTTCACGCAAGTTCCAGCGGTTTCGAGCAAAAG 720
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      GACTATTGCACCTTTACCATCAACTAAAAGGCAGGCACCTGTTATCCCTGACCAAAAGAA 780
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      AGGGTCAGCCAGTCCAAAGGACATCAATCCGTTTAGTGTTCTGTCACAATCAGGTGGTGC 840
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TGTTAAAGATAACTGGGCTGATTCTGATGTGGAGAATGGCAGTATTAGCAGAAGTTCAGA 900
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TGAGAAGGAATCTAGGGAGCTAGTTTCTGATTGGGAGGATTTGGATGACAATGTTCTTCA 960
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      CGGCCAACTTGGTCTTTGTTCAAATCCAGATGAGATCAGTCAAAACTCCTCATACAACAG 1020
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TGTTGCTAAGGGAGCGGAGTTTGTGGAATGCAGTCATTTGGTTGTCAATCCTGTGAATGG 1080
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      AGGAATCCAAAGTTCTGATGGAGACATGCTTGTGATCTCAGATGATGTGCATTCAGGTGC 1140
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TGTGGGTGTTGATGGGATAGAGAGTGGGGGTCAGAATGAACCAGATGATGTCTCGATACA 1200
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      GCCTGAAAGACTGTCCATCCTGCAAAAACTTAAGGAGTTGTTTGTTCTACGACAACAGGC 1260
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      AGTGCTATCTGATCAAAATCTTGCATATTCTAATTCAGATGAATATGCACCTGAAGAAAC 1320
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      ACAGGCCAATGTGAGCCTTTCTTGTCCAGAGCAATGTGCACCTGAAGAACCACAGGCCAA 1380
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TACAACCCCTTCTTGTCCAGAGCTACATGTACTTGAAGAAACACAGGCCAATGTGAGCCT 1440
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TCTTTGTCCAGAGCAATATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCC 1500
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      AGAGCAACATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACA 1560
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TGTGCTTGAAGAAACACAGCCCAATGTGAGCCTTCCTTGTCCAGGGCAATATGTACCTGA 1620
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      AGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACATATACCTGAAGAAATACA 1680
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      AGCCAATGCAAGCCTTCCTTGTCCAGATCAGCATGTACCTGAAGAACCACAGGATGATGC 1740
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      AAGTTTTTCTTGTCCAGAGCAACATGTACCTGAAGAAACACAGACCAATGCAAGCCTTCC 1800
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TTGTCCAGATCAGCATGTACCTGAAGAAACACAGGATGATGCAAGCTTTTCTTGTCCAGA 1860
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      GCAACATGTACCTGAAGAAACACAGGCCAATGCAAGCCTTCCTTGTCCTGGCCAGCATGT 1920
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      ACCTGACAATGCAAGCCTTCCTTGTCCAGAGCAACATGTGCCTGAAGAAACACAGATCAA 1980
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TGCAGGTCTTTCTTGTCCAGATCAGCATCTTCCCGAAGAAACAAAGTTCAATGTCAGTCT 2040
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TGCCTATCCAGATCAGCATGTACCAGAGGAAACACAGGTCACTGCAGGCATTTCTTGCCC 2100
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      AGATCAGCATGTTCCTGAAGAAACACAGGTCAATGCAAGCCTTCCCTCTCCAAATCAGCA 2160
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TGTACCAGAAGAAACAAAGGCCACCGCAGCCATTTCTTGTCCAGATCAACATGTAACACA 2220
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      GGCCAATGCAAGCCTTTCTCAACACGAGTTCGGTGCTAAGGTGGAAGATAATACATCTCT 2280
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TGAGCAAAATCAAGGAAATGCTGAGCTGATAAAAATCGTCCTTGGCTTAATCAAGAAGAC 2340
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TGATTCATTGGATATGAGACAGAACAAGTCCCATGAAGAAATACTTTCTCTGAAGGAAGT 2400
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      AGTTAAAGACTCGGGAACAAAAGTAAAGCAACTGGAATACCGTATAGATGAGTTACAATT 2460
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      CAAACTTGACTCTTCACTGTCTCTTGTCGGAGATGCATGTGATACTCTGGACAAGCCATC 2520
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      GATATTCCTGATAGGTGGTTATAATGGTGTGTCCTGGTTGTCATCTCTTGATGCTTTTTC 2580
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      ACCTGAGAAAGACATACTGGTGCCTCTCGCACCATTGAGTTCTGCTCGTTCATATGCATC 2640
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TGTTGCTACATTGGAGGGTTGCATATTCGTCTGTGGTGGTGGGGTTGGCGATTCATTTGG 2700
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TAACACAGTGGAATGCTATAATACAATGTGTAACGAGTGGATGGCGTGCCCCCTGTTTGA 2760
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      ACAATAAAAAGGGAAGTCTCGCTGCAGTAAGTCTGGATGGAAAAGTATATGCTATTGGTG 2820
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      GAGGAGATGGAATTGTAACTTATTCAGATGTTGAGATGTTTGATCCTTTTCTTGGGAAGT 2880
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      GGATATGCAGCCCGTCTATGATGAACTCTCGATTTGCTCTTGGTGCGGCAGAAATGAACA 2940
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      GTGTCATCTATGCTACTGGTGGATTTGATGGTTTCAGCTACTTACAATCAGCAGAAAGGT 3000
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      ATGGCCCAAGGGAGGGTTTCTGGGCCCGGCTTCCAAGTATGAATGTAAGGAGAGGATGCC 3060
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      ACACTGTAGCTGCCCTTGGAGGAGTCCTGTATGCCATTGGAGGGTATAATGGGGATAGAA 3120
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TGGTGTCTAGCGTAGAGATCTTTGGCCCACGTCGCAACTCCTGGAGGGTGGGTGATCCCA 3180
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      TGAACTTTCCAAGAGGATACGCCTCTACAGTTACCCTGGGTGACAATGTGTTTGTCATTG 3240
consensus_4464#1      ------------------------------------------------------------
                                                                                  

consensus_4464#0      GCGGTCTACAGTCGAGTGAAAAGTTTATGGATTCTGTGGAAGTTTACAATGTGAAATGCG 3300
consensus_4464#1      -----------TCGAGTGAAAAGTTTATGGATTCTGTGGAAGTTTACAATGTGAAATGCG 49
                                 *************************************************

consensus_4464#0      GCTGGTCAGTTCCTGGTTTCAGCTCGATTGGGGTGAGGTGCTTCGCGTCTGCTGCTGTCG 3360
consensus_4464#1      GCTGGTCAGTTCCTGGTTTCAGCTCGATTGGGGTGAG-TGCTTCGCGTCTGCTGCTGTCG 108
                      ************************************* **********************

consensus_4464#0      TTTAAGCGTGTTAGAAGTACAGTGCTTGTCCCATCTCATCAGTTCT-AACAATTTTGTG- 3418
consensus_4464#1      TT-AAACGTGTTA-AAATTCAATGCTTGTCCCCTCCCCTCAATTCTTAACAATTTTGTGG 166
                      ** ** ******* ** * ** ********** ** * *** **** ************ 

consensus_4464#0      CCATGCA-AGGAAACAAACCCTAATCGTGTTTT--CCGACATTTTGAGGG--TAAAAATT 3473
consensus_4464#1      CCCTGCCCAAGAAACCAACCCCAATCCTGTTTTTCCCAAATTTTTGAAGGGTTAAAAATT 226
                      ** ***  * ***** ***** **** ******  ** *  ****** **  ********

consensus_4464#0      GCCC-TTCTGCTGT--GATTCCAGTTTCGTGTACAGCGAAAGTCAGC--ATAGTATGGAG 3528
consensus_4464#1      GCCCCTTCTGCCGGTGAATCCCACTTTCCTGTTTCACCGAAATCCCCCCATATTTTGAAC 286
                      **** ****** *    ** *** **** ***    *  ** **  *  *** * ** * 

consensus_4464#0      CTCTAGGTAGTCAGTCACT---TGTCC---AAAGTTTAGATCCTCAT---TTATATACCT 3579
consensus_4464#1      CCCCAGTTTATCCCCTTCTCCTTGTCCCCAAATTTTTAAATCCCCCCCCCTCATATTCCC 346
                      * * ** *  **     **   *****   **  **** **** *     * **** ** 

consensus_4464#0      --GAATATTCACCTACT----GTTGAGAAACACCCTGTTTT-ATCAGGTACCA-----TG 3627
consensus_4464#1      CGAAAAATTCCCCCCCCCTCGGTTTAAAAACCCCCGGTTTTTAACAGGTTCCCAATTTTA 406
                         ** **** **  *     *** * **** *** ***** * ***** **      * 

consensus_4464#0      TAAATCTCTTGGAATGCATTCCGGCTAAAAATTCTGAA 3665
consensus_4464#1      TCCCCCTCTGGGAATA---------------------- 422
                      *    **** *****


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)