cluster # 4502

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Oryza sativa
cluster # 4502 cluster # 4502 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4502#0 length = 384 sequences # 3

consensusID : consensus_4502#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 384
fasta sequence

                              [ATGAAAACTGCCCAGGGTTCGCAATCAGGTAATCAGCCACCATGAAGCATCGCCATCAACGAAACAAAAACTAGTAGTTTTGATGAACTTGCAGGCAATTCTGATTGGGGGTAAAAACAAAAAAAGAAAAGAGAGGCTCCTGCAAGAGCCTTGCAGGAGGAAGGAAAGACATGAATGTACAGCTCTTGGCTTGAATCCAACATTCTCTTTTAAGAGTCTAGTTTAGAACTTTAGATTTGCATCATGTATATGTATGTCTGTTGGAAAAAGTACTTTGGAAATGTGGTGCTCTTCTTCTGCCATGATTCATTGGCGAGGAAAAGGATGTTTTCTTGCATCGGTGACGAAGTGAGGGTCACCGAATTGTTAGC-TTTGATCCAAAAA]

[+] EMBL AU163928             [ATGAAAACTGCCCAGGGTTCGCAATCAGGTAATCAGCCACCATGAAGCATCGCCATCAACGAAACAAAAACTAGTAGTTTTGATGAACTTGCAGGCAATTCTGATTGGGGGTAAAAACAAAAAAAGAAAAGAGAGGCTCCTGCAAGAGCCTTGCAGGAGGAAGGAAAGACATGAATGTACAGCTCTTGGCTTGAATCCAACATTCTCTTTTAAGAGTCTAGTTTAGAACTTTAGATTTGCATCATGTATATGTATGTCTGTT                                                                                                                           ]
[+] EMBL AU031629             [                                                                                                                                           CTGCAAGAGCTTTGCAGGAGGAAGGAAAGACATGAATGTACAGCTCTTGGCTTGAATCCAACATTCTCTTTTAAGAGTCTAGTTTAGAACTTTAGATTTGCATCATGTATATGTATGTCTGTTGGAAAAAGTACTTTGGAAATGTGGTGCTCTTCTTCTGCCATGATTCATTGGCGAGGAAAAGGATGTTTTCTTGCATCGGTGACGAAGTGAGGGTCACCGAATTGTTAGCTTTTGATCCAAAAA]
[+] EMBL OSR00411A            [                                                                                                                                           CTGCAAGAGCCTTGCAGGAGGAAGGAAAGACATGAATGTACAGCTCTTGGCTTGAATCCAACATTCTCTTTTAAGAGTCTAGTTTAGAACTTTAGATTTGCATCATGTATATGTATGTCTGTTGGAAAAAGTACTTTGGAAATGTGGTGCTCTTCTTCTGCCATGATTCATTGGCGAGGAAAAGGATGTTTTCTTGCATCGGTGACGAAGTGAGGGTCACCGAATTGTTAGC TTTGATCCAAAAA]




>consensus_4502#0
ATGAAAACTGCCCAGGGTTCGCAATCAGGTAATCAGCCACCATGAAGCATCGCCATCAAC
GAAACAAAAACTAGTAGTTTTGATGAACTTGCAGGCAATTCTGATTGGGGGTAAAAACAA
AAAAAGAAAAGAGAGGCTCCTGCAAGAGCCTTGCAGGAGGAAGGAAAGACATGAATGTAC
AGCTCTTGGCTTGAATCCAACATTCTCTTTTAAGAGTCTAGTTTAGAACTTTAGATTTGC
ATCATGTATATGTATGTCTGTTGGAAAAAGTACTTTGGAAATGTGGTGCTCTTCTTCTGC
CATGATTCATTGGCGAGGAAAAGGATGTTTTCTTGCATCGGTGACGAAGTGAGGGTCACC
GAATTGTTAGCTTTGATCCAAAAA

clustalw multiple alignements is not computed in this case