cluster # 4554

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Oryza sativa
cluster # 4554 cluster # 4554 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4554#0 length = 2274 sequences # 3
consensusID : consensus_4554#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2274
fasta sequence
                              [CATCATGTTTGTTGTGACAATGTTGCAGCTTCTCCTCCTACTCCTCCTACTCCTCTCCATTTCGCTTGATGTTTCACACCTCATTGCTGAAGCAGCAGCAGCAGCAAAGCCACCTGTGTCCTTCAGCTTCAACTTCTCTGATCCATCCACCTACAGCCTAGATGACCTCCTGTTCGAAGGCGACGCGGCCAAGCCGAAAGACGGGCTGGTCGACCTCACCTCCGGCCGCAGTTGTTATCCCTATTGCCCCGCCGGCCGGATGTCGTACGCTCACCCGGTGCAGCTCTACGACGACACCACCGGCGGCGAAAAGGTGGTGGTGGCCAGCTTCTCCACGAGGTTCACCTTCACAATCAGACCCATCGACGACGGTATCAGAGGGGATGGTCTGGCTTTCTTCCTGGCCAGTTACCCATCTAAGCTGCCGGCCAACTCGTTCGGCGGCAACCTTGGACTCATCAATAACGGGACGACCACCGCCTTCGGTTCGGACCGATTCATCGCCGTCGAGTTCGACACATACAACAACACTTTCGACCCCAAGAGCATCAACCACATTGGCATTGACATCAACTCCGTCGTCAGTTCCTTGAACACCACACTCTTGCCCAACTTCAGTCTGAACGGGACAATGACAGCCCACATCGAATTCAACGGCATAACGCAGATGCTGGTCGCCTCACTGTGGCTCGCTGGCCGTCCATGGTCTGCAGCGCCTGATTATCAGGTGAGTTTACGACTGCCAGATCCGATCACGTCGTTGCTCCTGCCGCAGGTGGCCGTGGGTTTTACTGGAGCCACCGCGGACCTCAAGGAGCTCAACCAGATAATGTTATGGTCATTCAACTCAACTCTTACGCTAGTAAACCAAGACAGACGCAATAAGGCACTGCTTTTTGGAGGACCGATCATCGGAGGAGCTGTTGCATTGGCGTTAGTGCTGTGGTTCTTGATCTCTTGTTTGATGCAGAAGAGGGTACGTAATACCTTTGGAAAGGGCACAGGCGGCGCCAGGCGATTCGAATACGACGATTTGGCCATCGCGACTGGCAATTTCTCTGATGATCGCAAGCTCGGAGAGGGGGCCTTTGGGGTAGTGTACAGCGGATTCCTGAAGCGGTTGGAGCGTGAAGTTGCTGTGAAGAAAATAGTGAGGGAGTCCAGCCAAGAGCATAAAGACTTCTTCGCCGAAGTCAGCACTATCAGCGAAGCTAAGCACAAGAATCTCGTCAAGTTTTTTGGTTGGTGCTGCCGGGGACACAGCTGGAACATTCTCCGTTTCATGTGCAGCTGTTTATGGAGCAACAATAATAAGGAGCTCTTCCTTGTATATGAATTGATGAAAAATGGCAACCTCAACGACTACTTGTACAAGAGCGAGTCAGCAGCAGTACTTTCATGGCAAACAAGGTATAAAATAGCCAAGGACATTGGGTCAGGCCTGTTGTACCTACATCACGAGTGCTACCCATATATCATACACAGAGATATCAAACCAGGCAACGTACTCTTGGACGACGATTTCAACGCCAAGCTCGCTGATTTTGGTCTGTCAAGGGTCGCGAACCCGAACAATGCAACGCTGAAGACAACTGCCATAGGCTCACAAGGATACATTGATCCACAGTGCATGAAGGATGGTGAGGTCAGCTTCAACCGTAACT-CCGACGTGTACAGCTTCGGCATTGCCCTTCTTGAGATCGTCTGCGCGAGGAAACACAGGGAGCAGATCTGGGGCCTATACAAAAGCGGCGGTGATGTCGTCGAGGCTGCAGACTCAAGGCTAGCCATTGGTGTTGATGGCGCTGAAAGGAGGGAGATGGAGCGTGCCATCATCTTAGGGCTCTGGTGCTCTGTCTTCGAGACTAAACACCGGCCTACCATGCTCCAAGCAATGGATGTCCTGGAGCGTGATGCGCAGTTGCCTGACCTTAACTTAATCGTCAACTCTAATTTATCTTCAACAGACGCATCGTCAAGTTCGCCGGTCGAGAAGAGATATGACTCTGAGGAGGCACCGCTGGTTGCAGGCAGCTCTTCTAGCCAGCTAGCTGGTCGGTGAGCATCATGCTTGTCAAACAAGCTGAGACAACAAAATTCAATAAGCCTGGTGTATCACCAAGACTTCCATTCTCACGAGAGCTGCTTAGTGCTGACTGCACATTCTCATGTTGATCAGTTTATCATGTAATTGCCTTTTTCAAGAAACTTATAAACGAATAGACTACCTAAATTTGCTGCGTTGCTTTGTACGTAGCCAGATATATTAAACTT]

[+] EMBL AK073177             [CATCATGTTTGTTGTGACAATGTTGCAGCTTCTCCTCCTACTCCTCCTACTCCTCTCCATTTCGCTTGATGTTTCACACCTCATTGCTGAAGCAGCAGCAGCAGCAAAGCCACCTGTGTCCTTCAGCTTCAACTTCTCTGATCCATCCACCTACAGCCTAGATGACCTCCTGTTCGAAGGCGACGCGGCCAAGCCGAAAGACGGGCTGGTCGACCTCACCTCCGGCCGCAGTTGTTATCCCTATTGCCCCGCCGGCCGGATGTCGTACGCTCACCCGGTGCAGCTCTACGACGACACCACCGGCGGCGAAAAGGTGGTGGTGGCCAGCTTCTCCACGAGGTTCACCTTCACAATCAGACCCATCGACGACGGTATCAGAGGGGATGGTCTGGCTTTCTTCCTGGCCAGTTACCCATCTAAGCTGCCGGCCAACTCGTTCGGCGGCAACCTTGGACTCATCAATAACGGGACGACCACCGCCTTCGGTTCGGACCGATTCATCGCCGTCGAGTTCGACACATACAACAACACTTTCGACCCCAAGAGCATCAACCACATTGGCATTGACATCAACTCCGTCGTCAGTTCCTTGAACACCACACTCTTGCCCAACTTCAGTCTGAACGGGACAATGACAGCCCACATCGAATTCAACGGCATAACGCAGATGCTGGTCGCCTCACTGTGGCTCGCTGGCCGTCCATGGTCTGCAGCGCCTGATTATCAGGTGAGTTTACGACTGCCAGATCCGATCACGTCGTTGCTCCTGCCGCAGGTGGCCGTGGGTTTTACTGGAGCCACCGCGGACCTCAAGGAGCTCAACCAGATAATGTTATGGTCATTCAACTCAACTCTTACGCTAGTAAACCAAGACAGACGCAATAAGGCACTGCTTTTTGGAGGACCGATCATCGGAGGAGCTGTTGCATTGGCGTTAGTGCTGTGGTTCTTGATCTCTTGTTTGATGCAGAAGAGGGTACGTAATACCTTTGGAAAGGGCACAGGCGGCGCCAGGCGATTCGAATACGACGATTTGGCCATCGCGACTGGCAATTTCTCTGATGATCGCAAGCTCGGAGAGGGGGCCTTTGGGGTAGTGTACAGCGGATTCCTGAAGCGGTTGGAGCGTGAAGTTGCTGTGAAGAAAATAGTGAGGGAGTCCAGCCAAGAGCATAAAGACTTCTTCGCCGAAGTCAGCACTATCAGCGAAGCTAAGCACAAGAATCTCGTCAAGTTTTTTGGTTGGTGCTGCCGGGGACACAGCTGGAACATTCTCCGTTTCATGTGCAGCTGTTTATGGAGCAACAATAATAAGGAGCTCTTCCTTGTATATGAATTGATGAAAAATGGCAACCTCAACGACTACTTGTACAAGAGCGAGTCAGCAGCAGTACTTTCATGGCAAACAAGGTATAAAATAGCCAAGGACATTGGGTCAGGCCTGTTGTACCTACATCACGAGTGCTACCCATATATCATACACAGAGATATCAAACCAGGCAACGTACTCTTGGACGACGATTTCAACGCCAAGCTCGCTGATTTTGGTCTGTCAAGGGTCGCGAACCCGAACAATGCAACGCTGAAGACAACTGCCATAGGCTCACAAGGATACATTGATCCACAGTGCATGAAGGATGGTGAGGTCAGCTTCAACCGTAACT CCGACGTGTACAGCTTCGGCATTGCCCTTCTTGAGATCGTCTGCGCGAGGAAACACAGGGAGCAGATCTGGGGCCTATACAAAAGCGGCGGTGATGTCGTCGAGGCTGCAGACTCAAGGCTAGCCATTGGTGTTGATGGCGCTGAAAGGAGGGAGATGGAGCGTGCCATCATCTTAGGGCTCTGGTGCTCTGTCTTCGAGACTAAACACCGGCCTACCATGCTCCAAGCAATGGATGTCCTGGAGCGTGATGCGCAGTTGCCTGACCTTAACTTAATCGTCAACTCTAATTTATCTTCAACAGACGCATCGTCAAGTTCGCCGGTCGAGAAGAGATATGACTCTGAGGAGGCACCGCTGGTTGCAGGCAGCTCTTCTAGCCAGCTAGCTGGTCGGTGAGCATCATGCTTGTCAAACAAGCTGAGACAACAAAATTCAATAAGCCTGGTGTATCACCAAGACTTCCATTCTCACGAGAGCTGCTTAGTGCTGACTGCACATTCTCATGTTGATCAGTTTATCATGTAATTGCCTTTTTCAAGAAACTTATAAACGAATAGACTACCTAAATTTGCTGCGTTGCTTTGTACGTAGCCAGATATATTAAACTT]
[+] EMBL AU032426             [                                                                                                                                                                                                                                                                                                                                                                                  GGTATCAGAGGGGATGGTCTGGCTTTCTTCCTGGCCAGTTACCCATCTAAGCTGCCGGCCAACTCGTTCGGCGGCAACCTTGGACTCATCAATAACGGGACGACCACCGNCTTNGGTTCGGACCGATTCATCGNCGTCGAGTTCGACACATACAACAACACTTTCGACCCTAAGAGCATCANCCACATTGGTATTGACATCAACTNCGTCGTCAGTTCCTTGAGCACCACACTCTTGCCCAACTTNAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU082731             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAACCGTAACTACCGACGTGTACAGCTTCGGCATTGCCCTTCTTGAGATCGTCTGCNCGAGGAANCACAGGGAGCAGATCTGGGGCCTATACAAAANCGGCGGTGATGTCGTCGAGGCTGCAGACTCAAGGCTAGCCATTGGTGTTGATGGCGCTGAAAGGAGGGAGATGGAGCGTGCCATCATCTTAGGGCTCTGGTGCTCTGTCTTCGAGACTAAACACCGGCCTACCATGCTCCAAGCAATGGATGTCCTGGAGCGTGATGCGCAGTTGCCTGACCTTAACTTAATCGTCAACTCTAATTTATCTTCAACAGACGCATCGTCAAGTTCGCCGGTCGAGAAGAGATATGACTCTGAGGAGGCACCGCTGGTTGCAGGCAGCTCTTCTAGCCAGCTAGCTGGTCGGTGAGCATCAGGCTTGTCAAACAAGCTGAGACAACAAAATTCAATAAGCCTGGTGTATCACCAAGACTTCCATTCTCACGAGAGCTGCTTAGTGCTGACTGCACATTCTCATGTTGATCAGTTTATCATGTAATTGCCTTTTTCAAGAAACTTATAAACGAATAGACTACCTAAAaaaa                                     ]




>consensus_4554#0
CATCATGTTTGTTGTGACAATGTTGCAGCTTCTCCTCCTACTCCTCCTACTCCTCTCCAT
TTCGCTTGATGTTTCACACCTCATTGCTGAAGCAGCAGCAGCAGCAAAGCCACCTGTGTC
CTTCAGCTTCAACTTCTCTGATCCATCCACCTACAGCCTAGATGACCTCCTGTTCGAAGG
CGACGCGGCCAAGCCGAAAGACGGGCTGGTCGACCTCACCTCCGGCCGCAGTTGTTATCC
CTATTGCCCCGCCGGCCGGATGTCGTACGCTCACCCGGTGCAGCTCTACGACGACACCAC
CGGCGGCGAAAAGGTGGTGGTGGCCAGCTTCTCCACGAGGTTCACCTTCACAATCAGACC
CATCGACGACGGTATCAGAGGGGATGGTCTGGCTTTCTTCCTGGCCAGTTACCCATCTAA
GCTGCCGGCCAACTCGTTCGGCGGCAACCTTGGACTCATCAATAACGGGACGACCACCGC
CTTCGGTTCGGACCGATTCATCGCCGTCGAGTTCGACACATACAACAACACTTTCGACCC
CAAGAGCATCAACCACATTGGCATTGACATCAACTCCGTCGTCAGTTCCTTGAACACCAC
ACTCTTGCCCAACTTCAGTCTGAACGGGACAATGACAGCCCACATCGAATTCAACGGCAT
AACGCAGATGCTGGTCGCCTCACTGTGGCTCGCTGGCCGTCCATGGTCTGCAGCGCCTGA
TTATCAGGTGAGTTTACGACTGCCAGATCCGATCACGTCGTTGCTCCTGCCGCAGGTGGC
CGTGGGTTTTACTGGAGCCACCGCGGACCTCAAGGAGCTCAACCAGATAATGTTATGGTC
ATTCAACTCAACTCTTACGCTAGTAAACCAAGACAGACGCAATAAGGCACTGCTTTTTGG
AGGACCGATCATCGGAGGAGCTGTTGCATTGGCGTTAGTGCTGTGGTTCTTGATCTCTTG
TTTGATGCAGAAGAGGGTACGTAATACCTTTGGAAAGGGCACAGGCGGCGCCAGGCGATT
CGAATACGACGATTTGGCCATCGCGACTGGCAATTTCTCTGATGATCGCAAGCTCGGAGA
GGGGGCCTTTGGGGTAGTGTACAGCGGATTCCTGAAGCGGTTGGAGCGTGAAGTTGCTGT
GAAGAAAATAGTGAGGGAGTCCAGCCAAGAGCATAAAGACTTCTTCGCCGAAGTCAGCAC
TATCAGCGAAGCTAAGCACAAGAATCTCGTCAAGTTTTTTGGTTGGTGCTGCCGGGGACA
CAGCTGGAACATTCTCCGTTTCATGTGCAGCTGTTTATGGAGCAACAATAATAAGGAGCT
CTTCCTTGTATATGAATTGATGAAAAATGGCAACCTCAACGACTACTTGTACAAGAGCGA
GTCAGCAGCAGTACTTTCATGGCAAACAAGGTATAAAATAGCCAAGGACATTGGGTCAGG
CCTGTTGTACCTACATCACGAGTGCTACCCATATATCATACACAGAGATATCAAACCAGG
CAACGTACTCTTGGACGACGATTTCAACGCCAAGCTCGCTGATTTTGGTCTGTCAAGGGT
CGCGAACCCGAACAATGCAACGCTGAAGACAACTGCCATAGGCTCACAAGGATACATTGA
TCCACAGTGCATGAAGGATGGTGAGGTCAGCTTCAACCGTAACTCCGACGTGTACAGCTT
CGGCATTGCCCTTCTTGAGATCGTCTGCGCGAGGAAACACAGGGAGCAGATCTGGGGCCT
ATACAAAAGCGGCGGTGATGTCGTCGAGGCTGCAGACTCAAGGCTAGCCATTGGTGTTGA
TGGCGCTGAAAGGAGGGAGATGGAGCGTGCCATCATCTTAGGGCTCTGGTGCTCTGTCTT
CGAGACTAAACACCGGCCTACCATGCTCCAAGCAATGGATGTCCTGGAGCGTGATGCGCA
GTTGCCTGACCTTAACTTAATCGTCAACTCTAATTTATCTTCAACAGACGCATCGTCAAG
TTCGCCGGTCGAGAAGAGATATGACTCTGAGGAGGCACCGCTGGTTGCAGGCAGCTCTTC
TAGCCAGCTAGCTGGTCGGTGAGCATCATGCTTGTCAAACAAGCTGAGACAACAAAATTC
AATAAGCCTGGTGTATCACCAAGACTTCCATTCTCACGAGAGCTGCTTAGTGCTGACTGC
ACATTCTCATGTTGATCAGTTTATCATGTAATTGCCTTTTTCAAGAAACTTATAAACGAA
TAGACTACCTAAATTTGCTGCGTTGCTTTGTACGTAGCCAGATATATTAAACTT
clustalw multiple alignements is not computed in this case