cluster # 4833

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Oryza sativa
cluster # 4833 cluster # 4833 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4833#0 length = 2008 sequences # 3
consensusID : consensus_4833#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2008
fasta sequence
                              [ACATGCTTTGCGCTACGTCTAAGGACTAAGCTTAGAAGAGCAAACCCAAAGATACCGCTCTCCGATAAGCAACATATGAGAGTTTCTTATGCTCAGTTGTCCAAAGCAACAAATAGTTTTGCATCTGAGAACCTCATTGGAGTGGGCAGCTTTGGTGCAGTGTACCAAGGAAGAATTGGGATCTCTGACCAACAATTGGTGGTTGCAGTGAAGGTGCTCAACTTGCAACAAGCTGGTGCGTATCGAAGTTTTGATGCAGAATGTGAGGCTTTGAGATGTATTCGCCATCGGAATCTTGTAAAGATTCTTACAGTTTGCTCAGGTATTGATTTCCAAGGTAGTGACTTCAAGGCGCTTGTATTTGAGTTCCTGCCAAATGGAAATTTAGACCAGTGGCTACACAAGCATCTTGAGGAGGAAGGTG-ACCTAAGG-GCTAAATCTCGTTGAAAGACTCCAAATTGCGATAGATGTGGCTTCTGCACTTGAATACTTACATCAGCACAAGCCATGTCCAATTGTTCACTGTGATCTGAAGCCAAGCAATATTCTTCTTGACAATGACATGGTTGCTCATGTTGGTGATTTTGGGCTTGCAAGGTTCCTTCATCAAGAAAACAGCAATAGTTCAGATAAATCAACTGGTTGGAATGCAATAAGAGGAACAATTGGCTATGTTGCCCCAGAGTATGGATTGGGCAATGAAGTCTCAATCCATGGAGACGTCTACAGCTATGGCATACTTTTGCTGGAGATGTTCACTGGAAAAAGGCCAACAAACAGTGAATTCGGCGATGTTCTTACTCTTCATGAGTATGTAGAAACAGCGCTGCCAGACCAAACAACTAGTGTCATTGACCAAAGCCTACTAGATGCGACATGGAATAGCGAAGGAACAGCTCAAAAGTACCACGACATCGAAGAGATAAGAACTGAGTGCATTGTTTCAATTCTGAAGGTCGGAATATTGTGCTCAAAAGAGATACCAACTGATCGGATGCAAATTGGGGATGCATTGAGAGAGTTGCAGGCAATTAGAGATAGGTTTGATACACATCAGCTATAGTAGCCTATATCTTGATGAAGTGGTGCAGCATATCAAAGTCATGCTTGTGCATGAAATATTCTACTTCGTACTATTTATCTGTTGAGGGTCATGCACTTATCAGTCAAGTAAGTCTGCAAGAAGACACTGGAGGCTGAACATGCTCTACTGAAGATTTTAGGAGTTGGAAGCTAAGAACGGATATCGAGTATCATGGAAGAAGCAAAACATCTTCAGCTAAGGAAAAGGAGGAAGTTAATTGAAATAAACTAGGGCAAAATGCTGTACTACATTATCAAGCAAAAATATTGTACTCGAGCAGCTACAGTCAGCTTATGGCCACACCTACACAACACTCTGTAATGGCTGAGAGGTATACTAAATAAGAGCCTATAGCAATTCGTATTGCAGGGCATCCAATTAGCTACTCATTTTCGCTCTTCGCACATATAATTCTTGACTGAGCAATTCATAAACATGTCAACATGGCAGTGCCTGACTTGGCTAATACTGTTGACAACTGTTGCAATAAGCAGCACAAGATAGCGACGTAAGAACCTCCATCTGTCATAGAAGTAGACATGAGAATTGTTAACACAACTTTTGTTCTGAATATTGGAATTTCTTGTTCAAATTCAACGAATCTCCCACAAAGTAAGAGATGCAACCAATAAGAAAAAGGTTTAACAGGGATTTGCTCCGAGAATGGAGCATCAACCCATGAAGCAGTACAAGGTATTTCCAGTGCAGGTCATCTTGAAACTATTGCACAACTCAAAAAAGGTCAATCTTGATCCAGGGGCTCTTGGCTAAGGCCCTGGATGTGGTCTATTCTACTGTAGACTGGCCCTCCCCTTAAGAGTTAGGTTTAGAATTTTGGATCGATTGATCACAGCCGAATTTGGAATGCAGGAATCTTGTCTTGTCCATGCAAAAGATTTGAGCATTTATATGCACTTTTAAGAA]

[+] EMBL C22445               [ACATGCTTTGCGCTACGTCTAAGGACTAAGCTTAGAAGAGCAAACCCAAAGATACCGCTCTCCGATAAGCAACATATGAGAGTTTCTTATGCTCAGTTGTCCAAAGCAACAAATAGTTTTGCATCTGAGAACCTCATTGGAGTGGGCAGCTTTGGTGCAGTGTACCAAGGAAGAATTGGGATCTCTGACCAACAATTGGTGGTTGCAGTGAAGGTGCTCAACTTGCAACAAGCTGGTGCGTATCGAAGTTTTGATGCAGAATGTGAGGCTTTGAGATGTATTCGCCATCGGAATCTTGTAAAGATTCTTACAGTTTGCTCAGGTATTGATTTCCAAGGTAGTGACTTCAAGGCGCTTGTATTTGAGTTCCTGCCAAATGGAAATTTAGACCAGTGGCTACACAAGCATCTTGAGGAGGAAGGTG ACCTAAGG GCTAAATCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK064556             [   TGCTTTGCGCTACGTCTAAGGACTAAGCTTAGAAGAGCAAACCCAAAGATACCGCTCTCCGATAAGCAACATATGAGAGTTTCTTATGCTCAGTTGTCCAAAGCAACAAGTAGTTTTGCATCTGAGAACCTCATTGGAGTGGGCAGCTTTGGTGCAGTGTACCAAGGAAGAATTGGGATCTCTGACCAACAATTGGTGGTTGCAGTGAAGGTGCTCAACTTGCAACAAGCTGGTGCGTATCGAAGTTTTGATGCAGAATGTGAGGCTTTGAGATGTATTCGCCATCGGAATCTTGTAAAGATTCTTACAGTTTGCTCAGGTATTGATTTCCAAGGTAGTGACTTCAAGGCGCTTGTATTTGAGTTCCTGCCAAATGGAAATTTAGACCAGTGGCTACACAAGCATCTTGAGGAAGAAGGTGAACCTAAGGTGCTAAATCTCGTTGAAAGACTCCAAATTGCGATAGATGTGGCTTCTGCACTTGAATACTTACATCAGCACAAGCCATGTCCAATTGTTCACTGTGATCTGAAGCCAAGCAATATTCTTCTTGACAATGACATGGTTGCTCATGTTGGTGATTTTGGGCTTGCAAGGTTCCTTCATCAAGAAAACAGCAATAGTTCAGATAAATCAACTGGTTGGAATGCAATAAGAGGAACAATTGGCTATGTTGCCCCAGAGTATGGATTGGGCAATGAAGTCTCAATCCATGGAGACGTCTACAGCTATGGCATACTTTTGCTGGAGATGTTCACTGGAAAAAGGCCAACAAACAGTGAATTCGGCGATGTTCTTACTCTTCATGAGTATGTAGAAACAGCGCTGCCAGACCAAACAACTAGTGTCATTGACCAAAGCCTACTAGATGCGACATGGAATAGCGAAGGAACAGCTCAAAAGTACCACGACATCGAAGAGATAAGAACTGAGTGCATTGTTTCAATTCTGAAGGTCGGAATATTGTGCTCAAAAGAGATACCAACTGATCGGATGCAAATTGGGGATGCATTGAGAGAGTTGCAGGCAATTAGAGATAGGTTTGATACACATCAGCTATAGTAGCCTATATCTTGATGAAGTGGTGCAGCATATCAAAGTCATGCTTGTGCATGAAATATTCTACTTCGTACTATTTATCTGTTGAGGGTCATGCACTTATCAGTCAAGTAAGTCTGCAAGAAGACACTGGAGGCTGAACATGCTCTACTGAAGATTTTAGGAGTTGGAAGCTAAGAACGGATATCGAGTATCATGGAAGAAGCAAAACATCTTCAGCTAAGGAAAAGGAGGAAGTTAATTGAAATAAACTAGGGCAAAATGCTGTACTACATTATCAAGCAAAAATATTGTACTCGAGCAGCTACAGTCAGCTTATGGCCACACCTACACAACACTCTGTAATGGCTGAGAGGTATACTAAATAAGAGCCTATAGCAATTCGTATTGCAGGGCATCCAATTAGCTACTCATTTTCGCTCTTCGCACATATAATTCTTGACTGAGCAATTCATAAACATGTCAACATGGCAGTGCCTGACTTGGCTAATACTGTTGACAACTGTTGCAATAAGCAGCACAAGATAGCGACGTAAGAACCTCCATCTGTCATAGAAGTAGACATGAGAATTGTTAACACAACTTTTGTTCTGAATATTGGAATTTCTTGTTCAAATTCAACGAATCTCCCACAAAGTAAGAGATGCAACCAATAAGAAAAAGGTTTAACAGGGATTTGCTCCGAGAATGGAGCATCAACCCATGAAGCAGTACAAGGTATTTCCAGTGCAGGTCATCTTGAAACTATTGCACAACTCAAAAAAGGTCAATCTTGATCCAGGGGCTCTTGGCTAAGGCCCTGGATGTGGTCTATTCTACTGTAGACTGGCCCTCCCCTTAAGAGTTAGGTTTAGAATTTTGGATCGATTGATCACAGCCGAATTTGGAATGCAGGAATCTTGTCTTGTCCATGCAAAAGATTTGAGCATTTATATGCACTTTTAAGAA]
[+] EMBL C22446               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTAGCCTATATCTTGATGAAGTGGTGCAGCATATCAAAGTCATGCTTGTGCATGAAATATTCTACTTCGTACTATTTATCTGTTGAGGGTCATGCACTTATCAGTCAAGTAAGTCTGCAAGAAGACACTGGAGGCTGAACATGCTCTACTGAAGATTTTAGGAGTTGGAAGCTAAAAACGGATATCGAGTATCATGGAAGAAGCAAAACATCTTCAGCTAAGGAAAAGGAGGAAGTTAATTGAAATAAACTAGGGCAAAATGCTGTACTACATTATCAAGCAAAAATATTGTACTCGAGCAGCTACAGTCAGCTTATGGCCACACCTACACAACACTCTGTAATGGCTGAGAGGTATACTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]




>consensus_4833#0
ACATGCTTTGCGCTACGTCTAAGGACTAAGCTTAGAAGAGCAAACCCAAAGATACCGCTC
TCCGATAAGCAACATATGAGAGTTTCTTATGCTCAGTTGTCCAAAGCAACAAATAGTTTT
GCATCTGAGAACCTCATTGGAGTGGGCAGCTTTGGTGCAGTGTACCAAGGAAGAATTGGG
ATCTCTGACCAACAATTGGTGGTTGCAGTGAAGGTGCTCAACTTGCAACAAGCTGGTGCG
TATCGAAGTTTTGATGCAGAATGTGAGGCTTTGAGATGTATTCGCCATCGGAATCTTGTA
AAGATTCTTACAGTTTGCTCAGGTATTGATTTCCAAGGTAGTGACTTCAAGGCGCTTGTA
TTTGAGTTCCTGCCAAATGGAAATTTAGACCAGTGGCTACACAAGCATCTTGAGGAGGAA
GGTGACCTAAGGGCTAAATCTCGTTGAAAGACTCCAAATTGCGATAGATGTGGCTTCTGC
ACTTGAATACTTACATCAGCACAAGCCATGTCCAATTGTTCACTGTGATCTGAAGCCAAG
CAATATTCTTCTTGACAATGACATGGTTGCTCATGTTGGTGATTTTGGGCTTGCAAGGTT
CCTTCATCAAGAAAACAGCAATAGTTCAGATAAATCAACTGGTTGGAATGCAATAAGAGG
AACAATTGGCTATGTTGCCCCAGAGTATGGATTGGGCAATGAAGTCTCAATCCATGGAGA
CGTCTACAGCTATGGCATACTTTTGCTGGAGATGTTCACTGGAAAAAGGCCAACAAACAG
TGAATTCGGCGATGTTCTTACTCTTCATGAGTATGTAGAAACAGCGCTGCCAGACCAAAC
AACTAGTGTCATTGACCAAAGCCTACTAGATGCGACATGGAATAGCGAAGGAACAGCTCA
AAAGTACCACGACATCGAAGAGATAAGAACTGAGTGCATTGTTTCAATTCTGAAGGTCGG
AATATTGTGCTCAAAAGAGATACCAACTGATCGGATGCAAATTGGGGATGCATTGAGAGA
GTTGCAGGCAATTAGAGATAGGTTTGATACACATCAGCTATAGTAGCCTATATCTTGATG
AAGTGGTGCAGCATATCAAAGTCATGCTTGTGCATGAAATATTCTACTTCGTACTATTTA
TCTGTTGAGGGTCATGCACTTATCAGTCAAGTAAGTCTGCAAGAAGACACTGGAGGCTGA
ACATGCTCTACTGAAGATTTTAGGAGTTGGAAGCTAAGAACGGATATCGAGTATCATGGA
AGAAGCAAAACATCTTCAGCTAAGGAAAAGGAGGAAGTTAATTGAAATAAACTAGGGCAA
AATGCTGTACTACATTATCAAGCAAAAATATTGTACTCGAGCAGCTACAGTCAGCTTATG
GCCACACCTACACAACACTCTGTAATGGCTGAGAGGTATACTAAATAAGAGCCTATAGCA
ATTCGTATTGCAGGGCATCCAATTAGCTACTCATTTTCGCTCTTCGCACATATAATTCTT
GACTGAGCAATTCATAAACATGTCAACATGGCAGTGCCTGACTTGGCTAATACTGTTGAC
AACTGTTGCAATAAGCAGCACAAGATAGCGACGTAAGAACCTCCATCTGTCATAGAAGTA
GACATGAGAATTGTTAACACAACTTTTGTTCTGAATATTGGAATTTCTTGTTCAAATTCA
ACGAATCTCCCACAAAGTAAGAGATGCAACCAATAAGAAAAAGGTTTAACAGGGATTTGC
TCCGAGAATGGAGCATCAACCCATGAAGCAGTACAAGGTATTTCCAGTGCAGGTCATCTT
GAAACTATTGCACAACTCAAAAAAGGTCAATCTTGATCCAGGGGCTCTTGGCTAAGGCCC
TGGATGTGGTCTATTCTACTGTAGACTGGCCCTCCCCTTAAGAGTTAGGTTTAGAATTTT
GGATCGATTGATCACAGCCGAATTTGGAATGCAGGAATCTTGTCTTGTCCATGCAAAAGA
TTTGAGCATTTATATGCACTTTTAAGAA
clustalw multiple alignements is not computed in this case