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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4854#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1476 fasta sequence
[GAAGTGAACATAAGTTTACTAGCTGGCTCTGGTACAGAAACTAGAGATTTACCTTGGGTGTCGCCTGGCTAATCACGAAATATTGTGTTTTTTGCACTTTAAACTGGCCTGTTCAACGGCTTTTCTTGTTTTGACACCGTTTGTTGCCATATGGGGCCTAAAAACAAATGTGAGGCTCTACTGTGAGCGCTGTACTTTTTGTATGAAGTGAAGCAAGATACGGAGAACAACTTTCATACTGATGATGATGTTCATCGAGACCACTTGCCACACACAGTACATCACGAGAGCTGCTGCAGATTCATCCATCAGAACATCCATCACCATCAGTACAGAGGTGCAAGCTTGACCATCACCAGACACACTGTTTGCCACCAGGTCCAGCAAGAGCAAAAGCAGAGGCCACCAGGTTATAGCTGGTTCAGTTCATCAGTTCAGGTGTGCTGCTCCCGAGTCCAAAGTCCAAACACATACGGCAGGTAGCCCGAGGAGGTCAGCGCAGAAGCACGAAGCGACCACGCACCCGACGGAGGACATGCACGGTCATCGTCGGCCGCCGGCTCCAGCGTCGCCGGCGGTTTCCGCCGCCGCTGGCCGCGGCGTCCACCATCGTGAGCTCGAAGAGGCAGACGTCGTGGGCGACGAGACGATTGTCGCCGGCGAACTGACGCCAGCCGGCGCCGTAGAAGCCGCGGGTGTTCTGCCGGTGCACGAACGGGACGTGCCACTCCCCTCCCCTGCTCGCCCTCTCCAGCACCACCTCCCTCTCCACCGCCCCCAGATACTTACCCGCGAACTCCGGCGACACCCCCTGACATCAAAACAAAAGCAGCACCAATTTAAATTTTCCCTATTTCAGCCAAGAAATGAAACTGCAATGTTGCAATGCAATGCCATTTGGTATGTGCAGTGTGTGCAGGAGGAGGAGACACGAGCGGCAGCTATAGCCGGAGATTTAACCTTGATGAAGCTGTTCCTGTGGAGCGTCATCTCCAGGTGGTGGCGATGGCCATTATCGCCGTCGACGATCGGCGGCGTGCGGCGGCCGTTTCTGCCTCCTTGTTCAGCTCCGGCGGAGTTCTCCGCTCTCCCGAATCCATGGCTCCCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGAGCACATCGAAGGAGGAGGAGACGCCGCTGTACCTGAAGAGCAGGCAGTCTCCTTCCTCGATGCCGTTGCCATCCACGAACTCTTTCCAGCCAGGCTGAAGAACTAGTTCACCGGCGTCGCTGTTGGCTACTCCAATGCTCCAGGTTTCGCCGCTAGGAGATCTCAGATTCACTTCCTCTGAGATGTGCCCGTTGAAATTGTTTGCAAATCTAGCAGGCACGGTCTGCAGCAATAGCAGGTTGACTGATTCAGGTTTTTTTTTTTTTCATACTTCAGTTCTTTCTGAGGTACACAGTGATATGAATAGAGAGATTCGTGCATG]
[+] EMBL AK109729 [GAAGTGAACATAAGTTTACTAGCTGGCTCTGGTACAGAAACTAGAGATTTACCTTGGGTGTCGCCTGGCTAATCACGAAATATTGTGTTTTTTGCACTTTAAACTGGCCTGTTCAACGGCTTTTCTTGTTTTGACACCGTTTGTTGCCATATGGGGCCTAAAAACAAATGTGAGGCTCTACTGTGAGCGCTGTACTTTTTGTATGAAGTGAAGCAAGATACGGAGAACAACTTTCATACTGATGATGATGTTCATCGAGACCACTTGCCACACACAGTACATCACGAGAGCTGCTGCAGATTCATCCATCAGAACATCCATCACCATCAGTACAGAGGTGCAAGCTTGACCATCACCAGACACACTGTTTGCCACCAGGTCCAGCAAGAGCAAAAGCAGAGGCCACCAGGTTATAGCTGGTTCAGTTCATCAGTTCAGGTGTGCTGCTCCCGAGTCCAAAGTCCAAACACATACGGCAGGTAGCCCGAGGAGGTCAGCGCAGAAGCACGAAGCGACCACGCACCCGACGGAGGACATGCACGGTCATCGTCGGCCGCCGGCTCCAGCGTCGCCGGCGGTTTCCGCCGCCGCTGGCCGCGGCGTCCACCATCGTGAGCTCGAAGAGGCAGACGTCGTGGGCGACGAGACGATTGTCGCCGGCGAACTGACGCCAGCCGGCGCCGTAGAAGCCGCGGGTGTTCTGCCGGTGCACGAACGGGACGTGCCACTCCCCTCCCCTGCTCGCCCTCTCCAGCACCACCTCCCTCTCCACCGCCCCCAGATACTTACCCGCGAACTCCGGCGACACCCCCTGACATCAAAACAAAAGCAGCACCAATTTAAATTTTCCCTATTTCAGCCAAGAAATGAAACTGCAATGTTGCAATGCAATGCCATTTGGTATGTGCAGTGTGTGCAGGAGGAGGAGACACGAGCGGCAGCTATAGCCGGAGATTTAACCTTGATGAAGCTGTTCCTGTGGAGCGTCATCTCCAGGTGGTGGCGATGGCCATTATCGCCGTCGACGATCGGCGGCGTGCGGCGGCCGTTTCTGCCTCCTTGTTCAGCTCCGGCGGAGTTCTCCGCTCTCCCGAATCCATGGCTCCCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGAGCACATCGAAGGAGGAGGAGACGCCGCTGTACCTGAAGAGCAGGCAGTCTCCTTCCTCGATGCCGTTGCCATCCACGAACTCTTTCCAGCCAGGCTGAAGAACTAGTTCACCGGCGTCGCTGTTGGCTACTCCAATGCTCCAGGTTTCGCCGCTAGGAGATCTCAGATTCACTTCCTCTGAGATGTGCCCGTTGAAATTGTTTGCAAATCTAGCAGGCACGGTCTGCAGCAATAGCAGGTTGACTGATTCAGGTTTTTTTTTTTTTCATACTTCAGTTCTTTCTGAGGTACACAGTGATATGAATAGAGAGATTCGTGCATG]
consensusID : consensus_4854#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1450 fasta sequence
[ATCCATCACCATCAGTACAGAGGTGCAAGCTTGACCATCACCAGGTACATACATATACTACATACTAGTATAGATACAACCAGGTACATACGTACATACATAATTACATACCAGTATAGACACACTGTTTGCCACCAGGTCCAGCAAGAGCAAAAGCAGAGGCCACCAGGTTATAGCTGGTTCAGTTCATCAGTTCAGGTGTGCTGCTCCCGAGTCCAAAGTCCAAACACATACGGCAGGTAGCCCGAGGAGGTCAGCGCAGAAGCACGAAGCGACCACGCACCCGACGGAGGACATGCACGGTCATCGTCGGCCGCCGGCTCCAGCGTCGCCGGCGGTTTCCGCCGCCGCTGGCCGCGGCGTCCACCATCGTGAGCTCGAAGAGGCAGACGTCGTGGGCGACGAGACGATTGTCGCCGGCGAACTGACGCCAGCCGGCGCCGTAGAAGCCGCGGGTGTTCTGCCGGTGCACGAACGGGACGTGCCACTCCCCTCCCCTGCTCGCCCTCTCCAGCACCACCTCCCTCTCCACCGCCCCCAGATACTTACCCGCGAACTCCGGCGACACCCCTACAATGCAGTACTTGCTGCTGCGGACGTGGCTGCTGTGGATGACCTGCACGAACACTGGGTTCCCGGGCTGAACCGGCACGGGGACGCGCGAGATCTCCTCCCTGTCTTCCTCCCTCAGGTTGTACTCGGCCACCCGTCCGTGCCTGCTGAAGTAGTACTCCCCGTAGCGCCCGCCTTCCGCGGCCGCGACAACATCTTCATCTTCGCCATCGTTTTCTTTCGCTTCTGTTTCATCACTGAATAAGCTGCGTTTGCATGCTCTGGGGATGCTCCTGCAGCTGTTCCTGTGGAGCGTCATCTCCAGGTGGTGGCGATGGCCATTATCGCCGTCGACGATCGGCGGCGTGCGGCGGCCGTTTCTGCCTCCTTGTTCAGCTCCGGCGGAGTTCTCCGCTCTCCCGAATCCATGGCTCCCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGAGCACATCGAAGGAGGAGGAGACGCCGCTGTACCTGAAGAGCAGGCAGTCTCCTTCCTCGATGCCGTTGCCATCCACGAACTCTTTCCAGCCAGGCTGAAGAACTAGTTCACCGGCGTCGCTGTTGGCTACTCCAATGCTCCAGGTTTCGCCGCTAGGAGATCTCAGATTCACTTCCTCTGAGATGTGCCCGTTGAAATTGTTTGCAAATCTAGCAGGCACGGTCATGCTCTCGGTGAAATCCCCAACCATATGCTTCAAGAAGTGCTTACTGTGGTCGGCCATATGGCTCCAGTAGCAGTGTTCTTGCCACTCCTTGCAAACGCTGCAGTTCTTGCCTATTTTCAGCATGCCCATTTGGATATCAGAACGGATACGAAGAAATCTAGAAACTAGGCAGAGGTCTCATAGGAGAAA]
[-] EMBL AK108660 [ATCCATCACCATCAGTACAGAGGTGCAAGCTTGACCATCACCAGGTACATACATATACTACATACTAGTATAGATACAACCAGGTACATACGTACATACATAATTACATACCAGTATAGACACACTGTTTGCCACCAGGTCCAGCAAGAGCAAAAGCAGAGGCCACCAGGTTATAGCTGGTTCAGTTCATCAGTTCAGGTGTGCTGCTCCCGAGTCCAAAGTCCAAACACATACGGCAGGTAGCCCGAGGAGGTCAGCGCAGAAGCACGAAGCGACCACGCACCCGACGGAGGACATGCACGGTCATCGTCGGCCGCCGGCTCCAGCGTCGCCGGCGGTTTCCGCCGCCGCTGGCCGCGGCGTCCACCATCGTGAGCTCGAAGAGGCAGACGTCGTGGGCGACGAGACGATTGTCGCCGGCGAACTGACGCCAGCCGGCGCCGTAGAAGCCGCGGGTGTTCTGCCGGTGCACGAACGGGACGTGCCACTCCCCTCCCCTGCTCGCCCTCTCCAGCACCACCTCCCTCTCCACCGCCCCCAGATACTTACCCGCGAACTCCGGCGACACCCCTACAATGCAGTACTTGCTGCTGCGGACGTGGCTGCTGTGGATGACCTGCACGAACACTGGGTTCCCGGGCTGAACCGGCACGGGGACGCGCGAGATCTCCTCCCTGTCTTCCTCCCTCAGGTTGTACTCGGCCACCCGTCCGTGCCTGCTGAAGTAGTACTCCCCGTAGCGCCCGCCTTCCGCGGCCGCGACAACATCTTCATCTTCGCCATCGTTTTCTTTCGCTTCTGTTTCATCACTGAATAAGCTGCGTTTGCATGCTCTGGGGATGCTCCTGCAGCTGTTCCTGTGGAGCGTCATCTCCAGGTGGTGGCGATGGCCATTATCGCCGTCGACGATCGGCGGCGTGCGGCGGCCGTTTCTGCCTCCTTGTTCAGCTCCGGCGGAGTTCTCCGCTCTCCCGAATCCATGGCTCCCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGAGCACATCGAAGGAGGAGGAGACGCCGCTGTACCTGAAGAGCAGGCAGTCTCCTTCCTCGATGCCGTTGCCATCCACGAACTCTTTCCAGCCAGGCTGAAGAACTAGTTCACCGGCGTCGCTGTTGGCTACTCCAATGCTCCAGGTTTCGCCGCTAGGAGATCTCAGATTCACTTCCTCTGAGATGTGCCCGTTGAAATTGTTTGCAAATCTAGCAGGCACGGTCATGCTCTCGGTGAAATCCCCAACCATATGCTTCAAGAAGTGCTTACTGTGGTCGGCCATATGGCTCCAGTAGCAGTGTTCTTGCCACTCCTTGCAAACGCTGCAGTTCTTGCCTATTTTCAGCATGCCCATTTGGATATCAGAACGGATACGAAGAAATCTAGAAACTAGGCAGAGGTCTCATAGGAGAAA]
consensusID : consensus_4854#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1390 fasta sequence
[GAAAGCTTGATCATCACCAGGTACGTACGTGCATACTTCCTTCATCCTAAAATTATTGTAACGTAGCACCGAATTTAACACAACTTGGTACTACGAATTAGACACAGCCTGACCAGATATTACAGATGCACTAGTTGTCACCAGGACCAGCAGCAAGCAAGAGCTAGCAAGCAGAGAGGCGACCAGGTTGGGCTCAGATCAGTTCACCAGTTTGAGCTGCACATGGATGGTTGGTCAGCGAATCAGCACGAAGCGGCCGCGCACCCGCCGGAGGACGTGCACGGCCATCGTCGGCCTCGGCCGGCGGCGCAGGCGGTCGCCGGCGCCGGCGCCGTCCACCAACCTGAGCTCGAAGAGGCAGACGTCGTGGGCGAGGAGGCCATTGTCACGGGCGAACCGACGCCACCCGGTGCCGTGGAAGCCGCGGCTGCTCTCCCGGCGCACGAACCGGACGTGCCACTGATCCCCTCCTCCTCCTCCTCCTCCCCTCTCCATCACCACCTCCCTCGCCATGGCCGGCCCCAGGTACCTGCCGGCGAACTCCGGCGACACGCCTACTGTGCTGTAGCGGCTGGAGAGGAGGTGGCTGGCGTGGATGACCTTCACCAACACCGGGTTGCCAGGCTCCACCGGCACGGGGACGCGCGAGATCTCCTCCTTGTCTCCCTTGCTCAGGTTGTACTCGGTCACTCGCCCGCCGTGCCTGCAGAAGTAGTACCTGTCCTCTCCATCTTTGTCAACGTCTTCGTCTTCATCTTCATCTTCGTCTTCATCGTCCCCTTCCTTCTTCTCTTCGCGATGATCTTGCTCTATCTCATCACTGAATAATCCGCGCTTACATGCACTGGGGATGCTCCTGCACCTGCTGCTGTTCTTGTGGGGTGTCATCTCCAGCTGGTGTTGGTGATGGCCATTCTTGTCACCATCTCTGCCTCCTCCTTCAGCTCCTGCAGACTTCTCTTCTCTCCCAAATCCACGGTTCTCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGAGCACATCGAAGGAGGAGACGCCACTGTACCTGAAGAGCAGGCAGTCATTTTCCTGGACGCCATTAGCATCCACGAACTCTTTCCAGCCTGACCGAAGAACTAGTTCACCGGTGTCACTGTAGGCTACTCCAATGCTCCATGTTTTGCCGCTAGGTGACTTCAGATTCACGACCTCTGAAATGTGCCCGTTGAAATTGTTGGCAAATCTACTAGGCACGATCATGCTCTCGGTGAAGTCCCCAACCATATACGTCAAGAAGTGCTTACAGTCATCGGCCATATGGCTCCAGTAGCAGTGTTCTTGCCACTCCTTGCAAACACTGCAGTTCTTGCCTATTTTCAGCATGCCCATTTGGATA]
[-] EMBL AK063506 [GAAAGCTTGATCATCACCAGGTACGTACGTGCATACTTCCTTCATCCTAAAATTATTGTAACGTAGCACCGAATTTAACACAACTTGGTACTACGAATTAGACACAGCCTGACCAGATATTACAGATGCACTAGTTGTCACCAGGACCAGCAGCAAGCAAGAGCTAGCAAGCAGAGAGGCGACCAGGTTGGGCTCAGATCAGTTCACCAGTTTGAGCTGCACATGGATGGTTGGTCAGCGAATCAGCACGAAGCGGCCGCGCACCCGCCGGAGGACGTGCACGGCCATCGTCGGCCTCGGCCGGCGGCGCAGGCGGTCGCCGGCGCCGGCGCCGTCCACCAACCTGAGCTCGAAGAGGCAGACGTCGTGGGCGAGGAGGCCATTGTCACGGGCGAACCGACGCCACCCGGTGCCGTGGAAGCCGCGGCTGCTCTCCCGGCGCACGAACCGGACGTGCCACTGATCCCCTCCTCCTCCTCCTCCTCCCCTCTCCATCACCACCTCCCTCGCCATGGCCGGCCCCAGGTACCTGCCGGCGAACTCCGGCGACACGCCTACTGTGCTGTAGCGGCTGGAGAGGAGGTGGCTGGCGTGGATGACCTTCACCAACACCGGGTTGCCAGGCTCCACCGGCACGGGGACGCGCGAGATCTCCTCCTTGTCTCCCTTGCTCAGGTTGTACTCGGTCACTCGCCCGCCGTGCCTGCAGAAGTAGTACCTGTCCTCTCCATCTTTGTCAACGTCTTCGTCTTCATCTTCATCTTCGTCTTCATCGTCCCCTTCCTTCTTCTCTTCGCGATGATCTTGCTCTATCTCATCACTGAATAATCCGCGCTTACATGCACTGGGGATGCTCCTGCACCTGCTGCTGTTCTTGTGGGGTGTCATCTCCAGCTGGTGTTGGTGATGGCCATTCTTGTCACCATCTCTGCCTCCTCCTTCAGCTCCTGCAGACTTCTCTTCTCTCCCAAATCCACGGTTCTCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGAGCACATCGAAGGAGGAGACGCCACTGTACCTGAAGAGCAGGCAGTCATTTTCCTGGACGCCATTAGCATCCACGAACTCTTTCCAGCCTGACCGAAGAACTAGTTCACCGGTGTCACTGTAGGCTACTCCAATGCTCCATGTTTTGCCGCTAGGTGACTTCAGATTCACGACCTCTGAAATGTGCCCGTTGAAATTGTTGGCAAATCTACTAGGCACGATCATGCTCTCGGTGAAGTCCCCAACCATATACGTCAAGAAGTGCTTACAGTCATCGGCCATATGGCTCCAGTAGCAGTGTTCTTGCCACTCCTTGCAAACACTGCAGTTCTTGCCTATTTTCAGCATGCCCATTTGGATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4854#1 ------------------------------------------------------------
consensus_4854#2 ------------------------------------------------------------
consensus_4854#0 GAAGTGAACATAAGTTTACTAGCTGGCTCTGGTACAGAAACTAGAGATTTACCTTGGGTG 60
consensus_4854#1 ------------------------------------------------------------
consensus_4854#2 ------------------------------------------------------------
consensus_4854#0 TCGCCTGGCTAATCACGAAATATTGTGTTTTTTGCACTTTAAACTGGCCTGTTCAACGGC 120
consensus_4854#1 ------------------------------------------------------------
consensus_4854#2 ------------------------------------------------------------
consensus_4854#0 TTTTCTTGTTTTGACACCGTTTGTTGCCATATGGGGCCTAAAAACAAATGTGAGGCTCTA 180
consensus_4854#1 ---------------------------------------------ATCCATCACCAT-CA 14
consensus_4854#2 ----------------------------------------GAAAGCTTGATCATCAC-CA 19
consensus_4854#0 CTGTGAGCGCTGTACTTTTTGTATGAAGTGAAGCAAGATACGGAGAACAACTTTCATACT 240
* ** *
consensus_4854#1 G-TACAGAGGTGCAAGCTTGACCATCACCAGGTACATACATATACTACA--TACTA-GTA 70
consensus_4854#2 GGTACGTACGTGCATACTT--CCTTCATCCTAAAATTATTGTAACGTAG--CACCG-AAT 74
consensus_4854#0 GATGATGATGTTCATCGAGACCACTTGCCACACACAGTACATCACGAGAGCTGCTGCAGA 300
* * * ** ** * * * * ** *
consensus_4854#1 TAGATACAACCAGGTACATA-CG---TACATACATAATTACATACC-----AGTAT-AGA 120
consensus_4854#2 TTAACACAACTTGGTAC-TA-CGAATTAGACACAGCCTGACCAGAT-----ATTAC-AGA 126
consensus_4854#0 TTCATCCATCAGAACATCCATCACCATCAGTACAGAGGTGCAAGCTTGACCATCACCAGA 360
* * ** * * * * * *** * * * ***
consensus_4854#1 CACACTGTTTGCCACCAGGTCCAGCAAGAGCAAAAGCAGAGGCCACCAGGTTATAGCTGG 180
consensus_4854#2 TGCACTAGTTGTCACCAGGACCAGCAGCA-----AGCAAGAGCTAGCAAGCAGAGAGGCG 181
consensus_4854#0 CACACTGTTTGCCACCAGGTCCAGCAAGAGCAAAAGCAGAGGCCACCAGGTTATAGCTGG 420
**** *** ******* ****** * **** ** * ** * *
consensus_4854#1 TTCAGTTCATCAGTTCAGGTGTGCTGCTCCCGAGTCCAAAGTCCAAACACATACGGCAGG 240
consensus_4854#2 ACCAGGTTG--GGCTCAGAT---CAGTTCACCAGTTTGAGCT------GCACATGGATGG 230
consensus_4854#0 TTCAGTTCATCAGTTCAGGTGTGCTGCTCCCGAGTCCAAAGTCCAAACACATACGGCAGG 480
*** * * **** * * * ** * *** * * ** * ** **
consensus_4854#1 TAGCCCGAGGAGGTCAGCGCAGAAGCACGAAGCGACCACGCACCCGACGGAGGACATGCA 300
consensus_4854#2 TTG---------GTCAGCGAATCAGCACGAAGCGGCCGCGCACCCGCCGGAGGACGTGCA 281
consensus_4854#0 TAGCCCGAGGAGGTCAGCGCAGAAGCACGAAGCGACCACGCACCCGACGGAGGACATGCA 540
* * ******* * *********** ** ******** ******** ****
consensus_4854#1 CGGTCATCGTCGGCCGCCGGCTCCAGCGTCGCCGGCGGTTTCCGCCGCCGCTGGCCGCGG 360
consensus_4854#2 CGGCCATCGTCGGCCTCGG---CCGGCGGCGCAGGCGGTCGCCGGCGCCG------GCGC 332
consensus_4854#0 CGGTCATCGTCGGCCGCCGGCTCCAGCGTCGCCGGCGGTTTCCGCCGCCGCTGGCCGCGG 600
*** *********** * * ** *** *** ****** *** ***** ***
consensus_4854#1 CGTCCACCATCGTGAGCTCGAAGAGGCAGACGTCGTGGGCGACGAGACGATTGTCGCCGG 420
consensus_4854#2 CGTCCACCAACCTGAGCTCGAAGAGGCAGACGTCGTGGGCGAGGAGGCCATTGTCACGGG 392
consensus_4854#0 CGTCCACCATCGTGAGCTCGAAGAGGCAGACGTCGTGGGCGACGAGACGATTGTCGCCGG 660
********* * ****************************** *** * ****** * **
consensus_4854#1 CGAACTGACGCCAGCCGGCGCCGTAGAAGCCGCGGGTGTTCTGCCGGTGCACGAACGGGA 480
consensus_4854#2 CGAACCGACGCCACCCGGTGCCGTGGAAGCCGCGGCTGCTCTCCCGGCGCACGAACCGGA 452
consensus_4854#0 CGAACTGACGCCAGCCGGCGCCGTAGAAGCCGCGGGTGTTCTGCCGGTGCACGAACGGGA 720
***** ******* **** ***** ********** ** *** **** ******** ***
consensus_4854#1 CGTGCCACT---------CCCCTCCCCTGCTCGCCCTCTCCAGCACCACCTCCCTCTCCA 531
consensus_4854#2 CGTGCCACTGATCCCCTCCTCCTCCTCCTCCTCCCCTCTCCATCACCACCTCCCTCGCCA 512
consensus_4854#0 CGTGCCACT---------CCCCTCCCCTGCTCGCCCTCTCCAGCACCACCTCCCTCTCCA 771
********* * ***** * * ********* ************* ***
consensus_4854#1 ---CCGCCCCCAGATACTTACCCGCGAACTCCGGCGACACCCCTACAATGCAGTACTTGC 588
consensus_4854#2 TGGCCGGCCCCAGGTACCTGCCGGCGAACTCCGGCGACACGCCTACTGTGCTGTAGCGGC 572
consensus_4854#0 ---CCGCCCCCAGATACTTACCCGCGAACTCCGGCGACACCCCC----TGACAT------ 818
*** ****** *** * ** ***************** ** ** *
consensus_4854#1 TGCTGCGGACGTGGCTGCTGTGGATGACCTGCACGAACACTGGGTTCCCGGGCTGAACCG 648
consensus_4854#2 TGGAGAGGAGGTGGCTGGCGTGGATGACCTTCACCAACACCGGGTTGCCAGGCTCCACCG 632
consensus_4854#0 CAAAACAAAAGCAGC-----------ACCAATTTAAAT-----TTTCCCTATTTCAGCCA 862
* * ** *** ** ** ** * **
consensus_4854#1 GCACGGGGACGCGCGAGATCTCCTCCCTGTCTTCCTCCCTCAGGTTGTACTCGGCCACCC 708
consensus_4854#2 GCACGGGGACGCGCGAGATCTCCTCCTTGTCTCCCTTGCTCAGGTTGTACTCGGTCACTC 692
consensus_4854#0 AGAAATGAAACTGCAATGTTGCAATGCAATGCCATTT------GGTATGTGCAG------ 910
* * * ** * * * * * * * * * *
consensus_4854#1 GTCCG---TGCCTGCTGAAGTAGTACTCCCCGTAGCGCCCGCCTTCCGCGGCCGCGACAA 765
consensus_4854#2 GCCCGCCGTGCCTGCAGAAGTAGTACCTGTCCTCTCCATCTTTGTCAACGTCTTCGTCTT 752
consensus_4854#0 --------TGTGTGCAGGAGGAGGA------------------------------GACAC 932
** *** * ** ** * * *
consensus_4854#1 CATCTTCATCTTCGCCATCGT--------------TTTCTTTCGC----------TTCTG 801
consensus_4854#2 CATCTTCATCTTCGTCTTCATCGTCCCCTTCCTTCTTCTCTTCGCGATGATCTTGCTCTA 812
consensus_4854#0 GAGCGGCAGCT------------------------------------------------- 943
* * ** **
consensus_4854#1 TTTCATCACTGAATAAGCTGCGTTTGCATGCTCTGGGGATGCTCCTGCA------GCTGT 855
consensus_4854#2 TCTCATCACTGAATAATCCGCGCTTACATGCACTGGGGATGCTCCTGCACCTGCTGCTGT 872
consensus_4854#0 ----ATAGCCGGAGA-------TTTA---ACCTTGATGAAGCT---------------GT 974
** * * * * ** * ** ** *** **
consensus_4854#1 TCCTGTGGAGCGTCATCTCCAGGTGGTGGCGATGGCCATTATCGCCGTCGACGATCGGCG 915
consensus_4854#2 TCTTGTGGGGTGTCATCTCCAGCTGGTGTTGGTGATGGCCATTCTTGTCA---------- 922
consensus_4854#0 TCCTGTGGAGCGTCATCTCCAGGTGGTGGCGATGGCCATTATCGCCGTCGACGATCGGCG 1034
** ***** * *********** ***** * ** ** ***
consensus_4854#1 GCGTGCGGCGGCCGTTTCTGCCTCCTTGTTCAGCTCCGGCGGAGTTCTCCGCTCTCCCGA 975
consensus_4854#2 -----------CCATCTCTGCCTCCTCCTTCAGCTCCTGCAGACTTCTCTTCTCTCCCAA 971
consensus_4854#0 GCGTGCGGCGGCCGTTTCTGCCTCCTTGTTCAGCTCCGGCGGAGTTCTCCGCTCTCCCGA 1094
** * ********** ********* ** ** ***** ******* *
consensus_4854#1 ATCCATGGCTCCCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGA 1035
consensus_4854#2 ATCCACGGTTCTCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGA 1031
consensus_4854#0 ATCCATGGCTCCCGACGAAATGCGGCGACGCCTTCTCGCAGCCGGACGGATCAAAGATGA 1154
***** ** ** ************************************************
consensus_4854#1 GCACATCGAAGGAGGAGGAGACGCCGCTGTACCTGAAGAGCAGGCAGTCTCCTTCCTCGA 1095
consensus_4854#2 GCACATCGAAGGAGGAG---ACGCCACTGTACCTGAAGAGCAGGCAGTCATTTTCCTGGA 1088
consensus_4854#0 GCACATCGAAGGAGGAGGAGACGCCGCTGTACCTGAAGAGCAGGCAGTCTCCTTCCTCGA 1214
***************** ***** *********************** ***** **
consensus_4854#1 TGCCGTTGCCATCCACGAACTCTTTCCAGCCAGGCTGAAGAACTAGTTCACCGGCGTCGC 1155
consensus_4854#2 CGCCATTAGCATCCACGAACTCTTTCCAGCCTGACCGAAGAACTAGTTCACCGGTGTCAC 1148
consensus_4854#0 TGCCGTTGCCATCCACGAACTCTTTCCAGCCAGGCTGAAGAACTAGTTCACCGGCGTCGC 1274
*** ** ********************** * * ****************** *** *
consensus_4854#1 TGTTGGCTACTCCAATGCTCCAGGTTTCGCCGCTAGGAGATCTCAGATTCACTTCCTCTG 1215
consensus_4854#2 TGTAGGCTACTCCAATGCTCCATGTTTTGCCGCTAGGTGACTTCAGATTCACGACCTCTG 1208
consensus_4854#0 TGTTGGCTACTCCAATGCTCCAGGTTTCGCCGCTAGGAGATCTCAGATTCACTTCCTCTG 1334
*** ****************** **** ********* ** ********** ******
consensus_4854#1 AGATGTGCCCGTTGAAATTGTTTGCAAATCTAGCAGGCACGGTCATGCTCTCGGTGAAAT 1275
consensus_4854#2 AAATGTGCCCGTTGAAATTGTTGGCAAATCTACTAGGCACGATCATGCTCTCGGTGAAGT 1268
consensus_4854#0 AGATGTGCCCGTTGAAATTGTTTGCAAATCTAGCAGGCACGGTC-------TGCAGCAAT 1387
* ******************** ********* ******* ** * * * *
consensus_4854#1 CCCCAACCATATGCTTCAAGAAGTGCTTACTGTGGTCGGCCATATGGCTCCAGTAGCAGT 1335
consensus_4854#2 CCCCAACCATATACGTCAAGAAGTGCTTACAGTCATCGGCCATATGGCTCCAGTAGCAGT 1328
consensus_4854#0 AGCAGGTTGACTGATTCAGGTTTTTTTTTTTTTCATACTTCA----GTTCTTTCTGAGGT 1443
* * *** * * ** * * ** * ** * **
consensus_4854#1 GTTCTTGCCACTCCTTGCAAACGCTGCAGTTCTTGCCTATTTTCAGCATGCCCATTTGGA 1395
consensus_4854#2 GTTCTTGCCACTCCTTGCAAACACTGCAGTTCTTGCCTATTTTCAGCATGCCCATTTGGA 1388
consensus_4854#0 ACACA-GTGA-----TATGAATAGAGAGATTCGTGCATG--------------------- 1476
* * * * ** * *** *** *
consensus_4854#1 TATCAGAACGGATACGAAGAAATCTAGAAACTAGGCAGAGGTCTCATAGGAGAAA 1450
consensus_4854#2 TA----------------------------------------------------- 1390
consensus_4854#0 -------------------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||