cluster # 4891

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Oryza sativa
cluster # 4891 cluster # 4891 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_4891#0 length = 684 sequences # 3

consensusID : consensus_4891#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 684
fasta sequence

                              [AATCATATTTGGTTGCCGTAATTTCGATATACTTAGCTCCCCAGGCTAGTCCTGCGGTTGCCACCAAACCTA-AAGCGGTAATGAGCCATATACCGTTTAATATCCTGGCCTCGTGCTGAAAATCTAATTTATTGCTGTTTTGCGAGTATGATTCCATTCTTTTAGTTATCCTTAGAAAAAATATTAATATTCACCATCAATAAATTTAAAACCACGCATACAAAATACTTTTGCATTTATGGATACAGAAAACGCTTCCGCTCGTCCATAAGGCATATTTTATACCTGGTACTTGTTAAGTGTCGTTTTTAGTAAGAAAAAAATCCCGACACATGGCCGGGATAGTGATGGTGAAAAAGAATTAACGGCGGTTGCCGAAGATCCGCAACAACATCAGGAACAGGTTGATGAAGTCCAGATACAAGGTTAACGCGCCAAGAATGGAATATTTGCGCAGGTTCGACGTGTCGCGGGTATCAATCTGCTCACCCATATTTTTCAGTTTCTGCGTGTCATACGCCGTCAATCCGACAAAGACAATCACGCCGATGTAGGTAACTGCCCACATCAATGCTTCGCTTTTCAACCAGAAGTTGACCAGCGATGCCAGCACAATGCCGATTAACCCCATAAACAGCATATTGCCAAAGCCACTTAAATCGCGCTTCGTGGTGTAACCGTACA]

[-] EMBL CF306487             [AATCATATTTGGTTGCCGTAATTTCGATATACTTAGCTCCCCAGGCTAGTCCTGCGGTTGCCCCCAAA CTANAAGCGGTAATGAGCCATATACCGTTTAATATTCTGGCCTCGTGCTGAAAATCTAATTTATTGCTGTTTTGCGAGTATGATTCCATTCTTTTAGTTATCCTTAGAAAAAATATTAATATTCACCATCAATAAATTTAAAACCACGCATACAAAATACTTTTGCATTTATGGATACAGAAAACGCTTCCGCTCGTCCATAAGGCATATTTTATACCTGGTACTTGTTAAGTGTCGTTTTTAGTAAGAAAAAAATCCCGACACATGGCCGGGATAGTGATGGTGAAAAAGAATTAACGGCGGTTGCCGAAGATCCGCAACAACATCAGGAACAGGTTGATGAAGTCCAGATACAAGGTTAACGCGCCAAGAATG                                                                                                                                                                                                                                                 ]
[-] EMBL CF306510             [                                        CCAGGCTAGTCCTGCGGTTGCCACCAAACCTA AAGCGGTAATGAGCCATATACCGTTTAATATCCTGGCCTCGTGCTGAAAATCTATTTTATTGCTGTTTTGNGAGTATGATTCCATTCTTTTAGTTATCCTTAGAAAAAATATTAATATTCACCATCAATAAATTTAAAACCACGCATACAACATACTTTTGCATTTATGGATACAGAAAACGCTTCCGCTCGTCCATAAGGCATATTTTATACCTGGTACTTGTTAAGTGTCGTTTTTAGTAAGAAAAAAATCCCGACACATGGCCGGGATAGTGATGGTGAAAAAGAATTAACGGCGGTTGCCGAAGATCCGCAACAACATCAGGAACAGGTTGATGAAGTCCAGATACAAGGTTAACGCGCCAAGAATGGAATA                                                                                                                                                                                                                                            ]
[+] EMBL CF307319             [                                                    TGCGGTTGCCACCAAACCTA AAGCGGTAATGAGCCATATACCGTTTAATATCCTGGCCTCGTGCTGAAAATCTAATTTATTGCTGTTTTGCGAGTATGATTCCATTCTTTTAGTTATCCTTAGAAAAAATATTAATATTCACCATCAATTATTTTAAAACCACGCATACAAAATACTTTTGCATTTATGGATACAGAAAACGCTTCCGCTCGTCCATAAGGCATATTTTATACCTGGTACTTGTTAAGTGTCGTTTTTAGTAAGAAAAAAATCCCGACACATGGCCGGGATAGTGATGGTGAAAAAGAATTAACGGCGGTTGCCGAAGATCCGCAACAACATCAGGAACAGGTTGATGAAGTCCAGATACAAGGTTAACGCGCCAAGAATGGAATATTTGCGCAGGTTCGACGTGTCGCGGGTATCAATCTGCTCACCCATATTTTTCAGTTTCTGCGTGTCATACGCCGTCAATCCGACAAAGACAATCACGCCGATGTAGGTAACTGCCCACATCAATGCTTCGCTTTTCAACCAGAAGTTGACCAGCGATGCCAGCACAATGCCGATTAACCCCATAAACAGCATATTGCCAAAGCCACTTAAATCGCGCTTCGTGGTGTAACCGTACA]




>consensus_4891#0
AATCATATTTGGTTGCCGTAATTTCGATATACTTAGCTCCCCAGGCTAGTCCTGCGGTTG
CCACCAAACCTAAAGCGGTAATGAGCCATATACCGTTTAATATCCTGGCCTCGTGCTGAA
AATCTAATTTATTGCTGTTTTGCGAGTATGATTCCATTCTTTTAGTTATCCTTAGAAAAA
ATATTAATATTCACCATCAATAAATTTAAAACCACGCATACAAAATACTTTTGCATTTAT
GGATACAGAAAACGCTTCCGCTCGTCCATAAGGCATATTTTATACCTGGTACTTGTTAAG
TGTCGTTTTTAGTAAGAAAAAAATCCCGACACATGGCCGGGATAGTGATGGTGAAAAAGA
ATTAACGGCGGTTGCCGAAGATCCGCAACAACATCAGGAACAGGTTGATGAAGTCCAGAT
ACAAGGTTAACGCGCCAAGAATGGAATATTTGCGCAGGTTCGACGTGTCGCGGGTATCAA
TCTGCTCACCCATATTTTTCAGTTTCTGCGTGTCATACGCCGTCAATCCGACAAAGACAA
TCACGCCGATGTAGGTAACTGCCCACATCAATGCTTCGCTTTTCAACCAGAAGTTGACCA
GCGATGCCAGCACAATGCCGATTAACCCCATAAACAGCATATTGCCAAAGCCACTTAAAT
CGCGCTTCGTGGTGTAACCGTACA

clustalw multiple alignements is not computed in this case