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Oryza sativa
cluster # 4895 cluster # 4895       Sequences # 3       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_4895#0 length = 2490 sequences # 1  
 consensus_4895#1 length = 697 sequences # 1  
consensus_4895#2 length = 676 sequences # 1  
consensusID : consensus_4895#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2490
fasta sequence 
                              [TTCATCGTGTTCATCGGGACAATTTACAGGCACTTCCCTCAATAGTGCTGCAATTTCTGTGCTCTTTGCTCCACTGAGGCACTGTCGACTTTCAGTTTAACAGAAAATAGAGTTATGATCCTGCAAGTTGGAAAAACATAATCACTTCTTGCGGTTTGCTGCATTGTTTAAGCAAATTTAGAGCCCTTTTTTATTGCATGCAACTGTGATCACAACCAGCACTCCCTCGGTAAAAAAAAAAAAAAAACTCAATTCCTGAATTTTCGTATCTAACGTTTGACCATCCTGAGTTATAGTGACCTGAGTACCCAAGATCTTGAGTTCAAATCTCCTATGGAGCGAATTTCAGATTGGGTTGTTTGCGGGGCTAAATTCCCTATTTCAATGGCAGTATATATCCGGTTGGATATAGAGGCCGGGTAAAAAATAACTTTCTCTAAAAAAAAAGTTTGTCCGTCTGTTTTATTTAAAAAAATATGAAAAAAATTTAAAAATAAGTCAGACATAAAATATTATTCATGTTTTATCATATAACAATAATAAAAATACTAATCATAAAAATATTTTATATAAAACGGACTTATATTTTATATAAAATGGACGGTTAAACAGTAGATACGTCTTTTGTCTTTTTGGAACGAGGGAGTAGGCATTATGGTGGGCACGAGGTGGGTCCCACTGAGCATATTGCAAGTTGGAGTATATGAGAGGAAGGGGTATTAAGAGTATGCCCAGCAGATCTTCTATCCGGCCTCGGCCACCCATCTTTTGTTTAGTGTATGGAAGTGAAAAATCATGCTCCTTTTGGATATCCTTTAAACCGAGTCCTGTCCAGCCAAATTTGGTATTTCTCTCTGCTCACTCCATCCCTCAACTGCCCAGTTTCCACGACTCGCGCCACCATCCGGACTCGTGGGCAACAGGGAAGAGAGAGAGAGAGAGGATGTGCATACCGGATCGGGCGGTGAAGATCGCCGGAGTGGAGGCCCCGCCATCCTCGCAGACTGCGACCCGCGCTGCGCCGCCGCTCACAGTGCCCCGCCGTCCGCGCCGACCGCGACCTGCGCTACGCCGCCACCCGCGTATCGCTTCGCCGTCGGGCCAGCCAAGCTGTATCGCTGCTCCATCGTGACTCTACTCGCGCCGCCCTGCCCTGTCGTCCCGCCGCATCACCCGCTCCGCTCGCACCGTCTGCCTTTCGCCTCTCGGTTGGAATCAACGAGGAGCGATGCATATCTAGCAGTTTTGTTTTTCATTCTTTTTTTTCCTAGCAGAGGATAAGGTCTGTTCCCTGGCGGTGTCTCGTCTCTCGTGTGTTTCTAAACAGAGGATTAAAACTGTATTCTCAAAGTGGTAACTATACAGTTAAATTGAAATATATAGCTCTTAAAAAAGATTGATAGAAATATATGGGTACTGGGTTGTTAAAAATATTAGTAAAATATAGAATAATGTGATATGGATGATTTGTTGGAGTAGGTAAATATATGGAGGAGGAATATTTTTAGATGACCATCTAAATATAAATAGGAATATGGAGGTTCAAATTTAGATGAAATGATGAGGATGCTCTAAGGTGGGCCCCACATTTTAATAAAGTACCTTACCATCCCAACCACCCTATTCTCTCTCTAGCCGGCAGCCACCCAAAATTTCCCCATCCTTTCGGCTTCTCCTCACCCACCGGCCACCGATGACGACGCCGCCGGCAGCTCACGCTCGTGGATCCGTGATGGCGGTGGTGCTCGCGGCTGGTGGCCCGCGGATCCAACAGCCGTGGAGGCGCTCATCGGAGGAGGATGCGTCGGCGCAGCGCTCGCGGACGACGAAGGTGGCAAGTCACGAGCGGATCCGCGATGGTGGCGGCGGCGGCGGCGGCGGCATTCACGGGAGCGGATCCAAGGAGGCGCTCGTGTACGGCGCCGGTGGAGCTCGCGCTCGCGGATCCGCAGCGGCCCTCTCGGACGGCGTCTGTGGCGCTCGCGGTTGGCTTCGGCGACAGATCTCCGGTTGTGGCGGTGGGGCCTGCGGGCGAAATCCGGCGGCGGTAGGGCTTGCAGCACAACTCCACACAGCTGCTCGACTGCTCAATACTTCCCCTCCCCGGGCCTTCTTCCTCTTTGTTTCGTTTCCATGGCGGCAATCAACAGAACCGGAGAGAGAACTAATTTTTTTTAATCCTTGTGGCCGGTCCTTAGCCATAAGGACGGCTCATCCAAAAGCCTCCTAGAAGGATCACCTCCACAATGTATAAATGCTTCTCAAGGGGCTTAAGACCCTCCTTATTTCTACATTGTGCATGACCTAATCAACTTGCCCATGTATGTACTTTTTTACAGTATTTTTAGGTAGAATACCATTTTATAATTGCTAGGAATCGCCAACGCTCGTTTCCAATAGTTCTCTTGTTAGTTTGTGATTATAGCTTTCCTAAACGTATTTCAACATGATTAGCTCTCTTTCATCCAACCATCTCCGTGAATGCTGAAA]

[+] EMBL AK121832             [TTCATCGTGTTCATCGGGACAATTTACAGGCACTTCCCTCAATAGTGCTGCAATTTCTGTGCTCTTTGCTCCACTGAGGCACTGTCGACTTTCAGTTTAACAGAAAATAGAGTTATGATCCTGCAAGTTGGAAAAACATAATCACTTCTTGCGGTTTGCTGCATTGTTTAAGCAAATTTAGAGCCCTTTTTTATTGCATGCAACTGTGATCACAACCAGCACTCCCTCGGTAAAAAAAAAAAAAAAACTCAATTCCTGAATTTTCGTATCTAACGTTTGACCATCCTGAGTTATAGTGACCTGAGTACCCAAGATCTTGAGTTCAAATCTCCTATGGAGCGAATTTCAGATTGGGTTGTTTGCGGGGCTAAATTCCCTATTTCAATGGCAGTATATATCCGGTTGGATATAGAGGCCGGGTAAAAAATAACTTTCTCTAAAAAAAAAGTTTGTCCGTCTGTTTTATTTAAAAAAATATGAAAAAAATTTAAAAATAAGTCAGACATAAAATATTATTCATGTTTTATCATATAACAATAATAAAAATACTAATCATAAAAATATTTTATATAAAACGGACTTATATTTTATATAAAATGGACGGTTAAACAGTAGATACGTCTTTTGTCTTTTTGGAACGAGGGAGTAGGCATTATGGTGGGCACGAGGTGGGTCCCACTGAGCATATTGCAAGTTGGAGTATATGAGAGGAAGGGGTATTAAGAGTATGCCCAGCAGATCTTCTATCCGGCCTCGGCCACCCATCTTTTGTTTAGTGTATGGAAGTGAAAAATCATGCTCCTTTTGGATATCCTTTAAACCGAGTCCTGTCCAGCCAAATTTGGTATTTCTCTCTGCTCACTCCATCCCTCAACTGCCCAGTTTCCACGACTCGCGCCACCATCCGGACTCGTGGGCAACAGGGAAGAGAGAGAGAGAGAGGATGTGCATACCGGATCGGGCGGTGAAGATCGCCGGAGTGGAGGCCCCGCCATCCTCGCAGACTGCGACCCGCGCTGCGCCGCCGCTCACAGTGCCCCGCCGTCCGCGCCGACCGCGACCTGCGCTACGCCGCCACCCGCGTATCGCTTCGCCGTCGGGCCAGCCAAGCTGTATCGCTGCTCCATCGTGACTCTACTCGCGCCGCCCTGCCCTGTCGTCCCGCCGCATCACCCGCTCCGCTCGCACCGTCTGCCTTTCGCCTCTCGGTTGGAATCAACGAGGAGCGATGCATATCTAGCAGTTTTGTTTTTCATTCTTTTTTTTCCTAGCAGAGGATAAGGTCTGTTCCCTGGCGGTGTCTCGTCTCTCGTGTGTTTCTAAACAGAGGATTAAAACTGTATTCTCAAAGTGGTAACTATACAGTTAAATTGAAATATATAGCTCTTAAAAAAGATTGATAGAAATATATGGGTACTGGGTTGTTAAAAATATTAGTAAAATATAGAATAATGTGATATGGATGATTTGTTGGAGTAGGTAAATATATGGAGGAGGAATATTTTTAGATGACCATCTAAATATAAATAGGAATATGGAGGTTCAAATTTAGATGAAATGATGAGGATGCTCTAAGGTGGGCCCCACATTTTAATAAAGTACCTTACCATCCCAACCACCCTATTCTCTCTCTAGCCGGCAGCCACCCAAAATTTCCCCATCCTTTCGGCTTCTCCTCACCCACCGGCCACCGATGACGACGCCGCCGGCAGCTCACGCTCGTGGATCCGTGATGGCGGTGGTGCTCGCGGCTGGTGGCCCGCGGATCCAACAGCCGTGGAGGCGCTCATCGGAGGAGGATGCGTCGGCGCAGCGCTCGCGGACGACGAAGGTGGCAAGTCACGAGCGGATCCGCGATGGTGGCGGCGGCGGCGGCGGCGGCATTCACGGGAGCGGATCCAAGGAGGCGCTCGTGTACGGCGCCGGTGGAGCTCGCGCTCGCGGATCCGCAGCGGCCCTCTCGGACGGCGTCTGTGGCGCTCGCGGTTGGCTTCGGCGACAGATCTCCGGTTGTGGCGGTGGGGCCTGCGGGCGAAATCCGGCGGCGGTAGGGCTTGCAGCACAACTCCACACAGCTGCTCGACTGCTCAATACTTCCCCTCCCCGGGCCTTCTTCCTCTTTGTTTCGTTTCCATGGCGGCAATCAACAGAACCGGAGAGAGAACTAATTTTTTTTAATCCTTGTGGCCGGTCCTTAGCCATAAGGACGGCTCATCCAAAAGCCTCCTAGAAGGATCACCTCCACAATGTATAAATGCTTCTCAAGGGGCTTAAGACCCTCCTTATTTCTACATTGTGCATGACCTAATCAACTTGCCCATGTATGTACTTTTTTACAGTATTTTTAGGTAGAATACCATTTTATAATTGCTAGGAATCGCCAACGCTCGTTTCCAATAGTTCTCTTGTTAGTTTGTGATTATAGCTTTCCTAAACGTATTTCAACATGATTAGCTCTCTTTCATCCAACCATCTCCGTGAATGCTGAAA]




>consensus_4895#0
TTCATCGTGTTCATCGGGACAATTTACAGGCACTTCCCTCAATAGTGCTGCAATTTCTGT
GCTCTTTGCTCCACTGAGGCACTGTCGACTTTCAGTTTAACAGAAAATAGAGTTATGATC
CTGCAAGTTGGAAAAACATAATCACTTCTTGCGGTTTGCTGCATTGTTTAAGCAAATTTA
GAGCCCTTTTTTATTGCATGCAACTGTGATCACAACCAGCACTCCCTCGGTAAAAAAAAA
AAAAAAACTCAATTCCTGAATTTTCGTATCTAACGTTTGACCATCCTGAGTTATAGTGAC
CTGAGTACCCAAGATCTTGAGTTCAAATCTCCTATGGAGCGAATTTCAGATTGGGTTGTT
TGCGGGGCTAAATTCCCTATTTCAATGGCAGTATATATCCGGTTGGATATAGAGGCCGGG
TAAAAAATAACTTTCTCTAAAAAAAAAGTTTGTCCGTCTGTTTTATTTAAAAAAATATGA
AAAAAATTTAAAAATAAGTCAGACATAAAATATTATTCATGTTTTATCATATAACAATAA
TAAAAATACTAATCATAAAAATATTTTATATAAAACGGACTTATATTTTATATAAAATGG
ACGGTTAAACAGTAGATACGTCTTTTGTCTTTTTGGAACGAGGGAGTAGGCATTATGGTG
GGCACGAGGTGGGTCCCACTGAGCATATTGCAAGTTGGAGTATATGAGAGGAAGGGGTAT
TAAGAGTATGCCCAGCAGATCTTCTATCCGGCCTCGGCCACCCATCTTTTGTTTAGTGTA
TGGAAGTGAAAAATCATGCTCCTTTTGGATATCCTTTAAACCGAGTCCTGTCCAGCCAAA
TTTGGTATTTCTCTCTGCTCACTCCATCCCTCAACTGCCCAGTTTCCACGACTCGCGCCA
CCATCCGGACTCGTGGGCAACAGGGAAGAGAGAGAGAGAGAGGATGTGCATACCGGATCG
GGCGGTGAAGATCGCCGGAGTGGAGGCCCCGCCATCCTCGCAGACTGCGACCCGCGCTGC
GCCGCCGCTCACAGTGCCCCGCCGTCCGCGCCGACCGCGACCTGCGCTACGCCGCCACCC
GCGTATCGCTTCGCCGTCGGGCCAGCCAAGCTGTATCGCTGCTCCATCGTGACTCTACTC
GCGCCGCCCTGCCCTGTCGTCCCGCCGCATCACCCGCTCCGCTCGCACCGTCTGCCTTTC
GCCTCTCGGTTGGAATCAACGAGGAGCGATGCATATCTAGCAGTTTTGTTTTTCATTCTT
TTTTTTCCTAGCAGAGGATAAGGTCTGTTCCCTGGCGGTGTCTCGTCTCTCGTGTGTTTC
TAAACAGAGGATTAAAACTGTATTCTCAAAGTGGTAACTATACAGTTAAATTGAAATATA
TAGCTCTTAAAAAAGATTGATAGAAATATATGGGTACTGGGTTGTTAAAAATATTAGTAA
AATATAGAATAATGTGATATGGATGATTTGTTGGAGTAGGTAAATATATGGAGGAGGAAT
ATTTTTAGATGACCATCTAAATATAAATAGGAATATGGAGGTTCAAATTTAGATGAAATG
ATGAGGATGCTCTAAGGTGGGCCCCACATTTTAATAAAGTACCTTACCATCCCAACCACC
CTATTCTCTCTCTAGCCGGCAGCCACCCAAAATTTCCCCATCCTTTCGGCTTCTCCTCAC
CCACCGGCCACCGATGACGACGCCGCCGGCAGCTCACGCTCGTGGATCCGTGATGGCGGT
GGTGCTCGCGGCTGGTGGCCCGCGGATCCAACAGCCGTGGAGGCGCTCATCGGAGGAGGA
TGCGTCGGCGCAGCGCTCGCGGACGACGAAGGTGGCAAGTCACGAGCGGATCCGCGATGG
TGGCGGCGGCGGCGGCGGCGGCATTCACGGGAGCGGATCCAAGGAGGCGCTCGTGTACGG
CGCCGGTGGAGCTCGCGCTCGCGGATCCGCAGCGGCCCTCTCGGACGGCGTCTGTGGCGC
TCGCGGTTGGCTTCGGCGACAGATCTCCGGTTGTGGCGGTGGGGCCTGCGGGCGAAATCC
GGCGGCGGTAGGGCTTGCAGCACAACTCCACACAGCTGCTCGACTGCTCAATACTTCCCC
TCCCCGGGCCTTCTTCCTCTTTGTTTCGTTTCCATGGCGGCAATCAACAGAACCGGAGAG
AGAACTAATTTTTTTTAATCCTTGTGGCCGGTCCTTAGCCATAAGGACGGCTCATCCAAA
AGCCTCCTAGAAGGATCACCTCCACAATGTATAAATGCTTCTCAAGGGGCTTAAGACCCT
CCTTATTTCTACATTGTGCATGACCTAATCAACTTGCCCATGTATGTACTTTTTTACAGT
ATTTTTAGGTAGAATACCATTTTATAATTGCTAGGAATCGCCAACGCTCGTTTCCAATAG
TTCTCTTGTTAGTTTGTGATTATAGCTTTCCTAAACGTATTTCAACATGATTAGCTCTCT
TTCATCCAACCATCTCCGTGAATGCTGAAA

consensusID : consensus_4895#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 697
fasta sequence 
                              [GATATCAACATTTGCTCCAAATGTTCAACATTGTTTTTCTGTTAGTGCACATGGGGATTCTGGGATTTTGATTTACAGTCTACATTTGATCAACATCCATTCTTTTTTCCTTTTTTTTTTTGCGGGGAAGCCTCATCTCCTTAAGCTTTCTGGTGTGGTTGCTCTGTGATTTCTTCTCTGCTGCATATCCTTATCTTCTTGGTTGCTGTATCAGAAATTCTACTTCATTGTGTTCATAGGGACAATTTACAGGCACTTCCCCCAATAGTGCTGCAATTTCTGTGCTATCTGCTTCACTGAGGCACTGTTGACTTTCAGTTTAACAGAAAATAGACTTATGATCCTGCAAGTTGGAAAAACATAATCACTTCTTGCAGTTTGCTGCATTGTTTAAGCAATTTGGAGCCCTTTTTTTTATTGCATGCAACTGTGCAGTAGATCTGGTCTCCTGGTCCTGTTTACCTCTTGCTGTAATCAACTTGCCCATGTATGTACTTTTTTTACAGTATTTTTAAGTAGAATACCATTTTATAATTGCTAGGAATCGCCAACGCTCGTTTCCAGTAGTTCTCTTGTTAGTTTGTGATTATAGCTTTCCTAAACGTATTTCAGCAGGATTAGCTCTCTTTCATCCAACCATCTCTGTGAATGCTCAAAATTCAATATGAAAAAAAAGCTTGCCTTTTATCTTAAAAAA]

[+] EMBL AU092246             [GATATCAACATTTGCTCCAAATGTTCAACATTGTTTTTCTGTTAGTGCACATGGGGATTCTGGGATTTTGATTTACAGTCTACATTTGATCAACATCCATTCTTTTTTCCTTTTTTTTTTTGCGGGGAAGCCTCATCTCCTTAAGCTTTCTGGTGTGGTTGCTCTGTGATTTCTTCTCTGCTGCATATCCTTATCTTCTTGGTTGCTGTATCAGAAATTCTACTTCATTGTGTTCATAGGGACAATTTACAGGCACTTCCCCCAATAGTGCTGCAATTTCTGTGCTATCTGCTTCACTGAGGCACTGTTGACTTTCAGTTTAACAGAAAATAGACTTATGATCCTGCAAGTTGGAAAAACATAATCACTTCTTGCAGTTTGCTGCATTGTTTAAGCAATTTGGAGCCCTTTTTTTTATTGCATGCAACTGTGCAGTAGATCTGGTCTCCTGGTCCTGTTTACCTCTTGCTGTAATCAACTTGCCCATGTATGTACTTTTTTTACAGTATTTTTAAGTAGAATACCATTTTATAATTGCTAGGAATCGCCAACGCTCGTTTCCAGTAGTTCTCTTGTTAGTTTGTGATTATAGCTTTCCTAAACGTATTTCAGCAGGATTAGCTCTCTTTCATCCAACCATCTCTGTGAATGCTCAAAATTCAATATGAAAAAAAAGCTTGCCTTTTATCTTAAAAAA]




>consensus_4895#1
GATATCAACATTTGCTCCAAATGTTCAACATTGTTTTTCTGTTAGTGCACATGGGGATTC
TGGGATTTTGATTTACAGTCTACATTTGATCAACATCCATTCTTTTTTCCTTTTTTTTTT
TGCGGGGAAGCCTCATCTCCTTAAGCTTTCTGGTGTGGTTGCTCTGTGATTTCTTCTCTG
CTGCATATCCTTATCTTCTTGGTTGCTGTATCAGAAATTCTACTTCATTGTGTTCATAGG
GACAATTTACAGGCACTTCCCCCAATAGTGCTGCAATTTCTGTGCTATCTGCTTCACTGA
GGCACTGTTGACTTTCAGTTTAACAGAAAATAGACTTATGATCCTGCAAGTTGGAAAAAC
ATAATCACTTCTTGCAGTTTGCTGCATTGTTTAAGCAATTTGGAGCCCTTTTTTTTATTG
CATGCAACTGTGCAGTAGATCTGGTCTCCTGGTCCTGTTTACCTCTTGCTGTAATCAACT
TGCCCATGTATGTACTTTTTTTACAGTATTTTTAAGTAGAATACCATTTTATAATTGCTA
GGAATCGCCAACGCTCGTTTCCAGTAGTTCTCTTGTTAGTTTGTGATTATAGCTTTCCTA
AACGTATTTCAGCAGGATTAGCTCTCTTTCATCCAACCATCTCTGTGAATGCTCAAAATT
CAATATGAAAAAAAAGCTTGCCTTTTATCTTAAAAAA

consensusID : consensus_4895#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 676
fasta sequence 
                              [CCACCCAAAATTTCCCCATCCTTTCGGCTTCTCCTCACCCACCGGCCACCGATGACGACGCCGCCGGCAGCTCACGCTCGTGGATCCGTGATGGCGGTGGTGCTCGCGGCTGGTGGCCCGCGGATCCAACAGCCGTGGAGGCGCTCATCGGAGGAGGATGCGTCGGCGCAGCGCTCGCGGACGACGAAGGTGGCAAGTCACGAGCGGATCCGCGATGGTGGCGGCGGCGGCGGCGGCGGCATTCACGGGAGCGGATCCAAGGAGGCGCTCGTGTACGGCGCCGGTGGAGCTCGCGCTCGCGGATCCGCAGCGGCCCTCTCGGACGGCGTCTGTGGCGCTCGCGGTTGGCTTCGGCGACAGATCTCCGGTTGTGGCGGTGGGGCCTGCGGGCGAAATCCGGCGGCGGTAGGGCTTGCAGCACAACTCCACACAGCTGCTCGACTGCTCAATACTTCCCCTCCCCGGGCCTTCTTCCTCTTTGTTTCGTTTCCATGGCGGCAATCAACAGAACCGGAGAGAGAACTAATTTTTTTTAATCCTTGTGGCCGGTCCTTAGCCATAAGGACGGCTCATCCAAAAGCCTCCTAGAAGGATCACCTCCACAATGTATAAATGCTTCTCAAGGGGCTTAAGACCCTCCTTATTTCTACATTGTGCATGACCTAAAAAAAAAAAA]

[+] EMBL AK063194             [CCACCCAAAATTTCCCCATCCTTTCGGCTTCTCCTCACCCACCGGCCACCGATGACGACGCCGCCGGCAGCTCACGCTCGTGGATCCGTGATGGCGGTGGTGCTCGCGGCTGGTGGCCCGCGGATCCAACAGCCGTGGAGGCGCTCATCGGAGGAGGATGCGTCGGCGCAGCGCTCGCGGACGACGAAGGTGGCAAGTCACGAGCGGATCCGCGATGGTGGCGGCGGCGGCGGCGGCGGCATTCACGGGAGCGGATCCAAGGAGGCGCTCGTGTACGGCGCCGGTGGAGCTCGCGCTCGCGGATCCGCAGCGGCCCTCTCGGACGGCGTCTGTGGCGCTCGCGGTTGGCTTCGGCGACAGATCTCCGGTTGTGGCGGTGGGGCCTGCGGGCGAAATCCGGCGGCGGTAGGGCTTGCAGCACAACTCCACACAGCTGCTCGACTGCTCAATACTTCCCCTCCCCGGGCCTTCTTCCTCTTTGTTTCGTTTCCATGGCGGCAATCAACAGAACCGGAGAGAGAACTAATTTTTTTTAATCCTTGTGGCCGGTCCTTAGCCATAAGGACGGCTCATCCAAAAGCCTCCTAGAAGGATCACCTCCACAATGTATAAATGCTTCTCAAGGGGCTTAAGACCCTCCTTATTTCTACATTGTGCATGACCTAAAAAAAAAAAA]




>consensus_4895#2
CCACCCAAAATTTCCCCATCCTTTCGGCTTCTCCTCACCCACCGGCCACCGATGACGACG
CCGCCGGCAGCTCACGCTCGTGGATCCGTGATGGCGGTGGTGCTCGCGGCTGGTGGCCCG
CGGATCCAACAGCCGTGGAGGCGCTCATCGGAGGAGGATGCGTCGGCGCAGCGCTCGCGG
ACGACGAAGGTGGCAAGTCACGAGCGGATCCGCGATGGTGGCGGCGGCGGCGGCGGCGGC
ATTCACGGGAGCGGATCCAAGGAGGCGCTCGTGTACGGCGCCGGTGGAGCTCGCGCTCGC
GGATCCGCAGCGGCCCTCTCGGACGGCGTCTGTGGCGCTCGCGGTTGGCTTCGGCGACAG
ATCTCCGGTTGTGGCGGTGGGGCCTGCGGGCGAAATCCGGCGGCGGTAGGGCTTGCAGCA
CAACTCCACACAGCTGCTCGACTGCTCAATACTTCCCCTCCCCGGGCCTTCTTCCTCTTT
GTTTCGTTTCCATGGCGGCAATCAACAGAACCGGAGAGAGAACTAATTTTTTTTAATCCT
TGTGGCCGGTCCTTAGCCATAAGGACGGCTCATCCAAAAGCCTCCTAGAAGGATCACCTC
CACAATGTATAAATGCTTCTCAAGGGGCTTAAGACCCTCCTTATTTCTACATTGTGCATG
ACCTAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_4895#0      TTCATCGTGTTCATCGGGACAATTTACAGGCACTTCCCTCAATAGTGCTGCAATTTCTGT 60
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      GCTCTTTGCTCCACTGAGGCACTGTCGACTTTCAGTTTAACAGAAAATAGAGTTATGATC 120
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      CTGCAAGTTGGAAAAACATAATCACTTCTTGCGGTTTGCTGCATTGTTTAAGCAAATTTA 180
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      GAGCCCTTTTTTATTGCATGCAACTGTGATCACAACCAGCACTCCCTCGGTAAAAAAAAA 240
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      AAAAAAACTCAATTCCTGAATTTTCGTATCTAACGTTTGACCATCCTGAGTTATAGTGAC 300
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      CTGAGTACCCAAGATCTTGAGTTCAAATCTCCTATGGAGCGAATTTCAGATTGGGTTGTT 360
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      TGCGGGGCTAAATTCCCTATTTCAATGGCAGTATATATCCGGTTGGATATAGAGGCCGGG 420
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      TAAAAAATAACTTTCTCTAAAAAAAAAGTTTGTCCGTCTGTTTTATTTAAAAAAATATGA 480
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      AAAAAATTTAAAAATAAGTCAGACATAAAATATTATTCATGTTTTATCATATAACAATAA 540
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      TAAAAATACTAATCATAAAAATATTTTATATAAAACGGACTTATATTTTATATAAAATGG 600
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      ACGGTTAAACAGTAGATACGTCTTTTGTCTTTTTGGAACGAGGGAGTAGGCATTATGGTG 660
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      GGCACGAGGTGGGTCCCACTGAGCATATTGCAAGTTGGAGTATATGAGAGGAAGGGGTAT 720
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      TAAGAGTATGCCCAGCAGATCTTCTATCCGGCCTCGGCCACCCATCTTTTGTTTAGTGTA 780
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      TGGAAGTGAAAAATCATGCTCCTTTTGGATATCCTTTAAACCGAGTCCTGTCCAGCCAAA 840
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      TTTGGTATTTCTCTCTGCTCACTCCATCCCTCAACTGCCCAGTTTCCACGACTCGCGCCA 900
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      CCATCCGGACTCGTGGGCAACAGGGAAGAGAGAGAGAGAGAGGATGTGCATACCGGATCG 960
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      GGCGGTGAAGATCGCCGGAGTGGAGGCCCCGCCATCCTCGCAGACTGCGACCCGCGCTGC 1020
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      GCCGCCGCTCACAGTGCCCCGCCGTCCGCGCCGACCGCGACCTGCGCTACGCCGCCACCC 1080
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      GCGTATCGCTTCGCCGTCGGGCCAGCCAAGCTGTATCGCTGCTCCATCGTGACTCTACTC 1140
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      GCGCCGCCCTGCCCTGTCGTCCCGCCGCATCACCCGCTCCGCTCGCACCGTCTGCCTTTC 1200
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      GCCTCTCGGTTGGAATCAACGAGGAGCGATGCATATCTAGCAGTTTTGTTTTTCATTCTT 1260
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      TTTTTTCCTAGCAGAGGATAAGGTCTGTTCCCTGGCGGTGTCTCGTCTCTCGTGTGTTTC 1320
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      TAAACAGAGGATTAAAACTGTATTCTCAAAGTGGTAACTATACAGTTAAATTGAAATATA 1380
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      TAGCTCTTAAAAAAGATTGATAGAAATATATGGGTACTGGGTTGTTAAAAATATTAGTAA 1440
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      AATATAGAATAATGTGATATGGATGATTTGTTGGAGTAGGTAAATATATGGAGGAGGAAT 1500
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      ATTTTTAGATGACCATCTAAATATAAATAGGAATATGGAGGTTCAAATTTAGATGAAATG 1560
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      ATGAGGATGCTCTAAGGTGGGCCCCACATTTTAATAAAGTACCTTACCATCCCAACCACC 1620
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      CTATTCTCTCTCTAGCCGGCAGCCACCCAAAATTTCCCCATCCTTTCGGCTTCTCCTCAC 1680
consensus_4895#2      ----------------------CCACCCAAAATTTCCCCATCCTTTCGGCTTCTCCTCAC 38
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      CCACCGGCCACCGATGACGACGCCGCCGGCAGCTCACGCTCGTGGATCCGTGATGGCGGT 1740
consensus_4895#2      CCACCGGCCACCGATGACGACGCCGCCGGCAGCTCACGCTCGTGGATCCGTGATGGCGGT 98
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      GGTGCTCGCGGCTGGTGGCCCGCGGATCCAACAGCCGTGGAGGCGCTCATCGGAGGAGGA 1800
consensus_4895#2      GGTGCTCGCGGCTGGTGGCCCGCGGATCCAACAGCCGTGGAGGCGCTCATCGGAGGAGGA 158
consensus_4895#1      ------------------------------------------------------------
                                                                                  

consensus_4895#0      TGCGTCGGCGCAGCGCTCGCGGACGACGAAGGTGGCAAGTCACGAGCGGATCCGCGATGG 1860
consensus_4895#2      TGCGTCGGCGCAGCGCTCGCGGACGACGAAGGTGGCAAGTCACGAGCGGATCCGCGATGG 218
consensus_4895#1      ------------------GATATCAACATTTGCTCCAAATGTTCAACATTGTTTTTCTGT 42
                                        *    * **    *   *** *    * *          ** 

consensus_4895#0      TGGCGGCGGCGGCGGCGGCGGCATTCACGGGAGCGGATCCAAGGAGGCGCTCGTGTACGG 1920
consensus_4895#2      TGGCGGCGGCGGCGGCGGCGGCATTCACGGGAGCGGATCCAAGGAGGCGCTCGTGTACGG 278
consensus_4895#1      TAGTGCACATGGGGATTCTGGGATTTTGATTTACAGTCTACATTTGATCAACATCCATT- 101
                      * * *     ** *     ** ***        * *     *   *     * *  *   

consensus_4895#0      CGCCGGTGGAGCTCGCGCTCGCGGATCCGCAGCGGCCCTCTCGGACGGCGTCTGTGGC-G 1979
consensus_4895#2      CGCCGGTGGAGCTCGCGCTCGCGGATCCGCAGCGGCCCTCTCGGACGGCGTCTGTGGC-G 337
consensus_4895#1      CTTTTTTCCTTTTTTTTTTTGCGGGGAAGCCTCATCTCCTTAAGCTTTCTGGTGTGGTTG 161
                      *     *     *     * ****    **  *  * *  *  *    *   *****  *

consensus_4895#0      CTCGCGGTTGGCTTCGGCGACAGATCTCCGGTTGTGGCGGTGGGGCCTGCGGGCGAAATC 2039
consensus_4895#2      CTCGCGGTTGGCTTCGGCGACAGATCTCCGGTTGTGGCGGTGGGGCCTGCGGGCGAAATC 397
consensus_4895#1      CTCTGTGATTTCTTCTCTGCTGCATATCC--TTATCTTCTTGGTTGCTGTATCAGAAATT 219
                      ***   * *  ****   *    ** ***  ** *     ***   ***     ***** 

consensus_4895#0      CGGCGGCGGTAGGGCTTGCAGCACAACTCCACACAGCTGCTCGACTGCTCAATACTTCCC 2099
consensus_4895#2      CGGCGGCGGTAGGGCTTGCAGCACAACTCCACACAGCTGCTCGACTGCTCAATACTTCCC 457
consensus_4895#1      CTACTTCATTGTGTTCATAGGGACAATT---TACAGGCACTTCCCCCAATAGTGCTGCAA 276
                      *  *  *  *  *       * **** *    ****   **   *     * * ** *  

consensus_4895#0      CTCCCCGGGCCTTCTTCCTCTTTGTTTCGTTTCCATGGCGGCAATCAACAGAACCGGAGA 2159
consensus_4895#2      CTCCCCGGGCCTTCTTCCTCTTTGTTTCGTTTCCATGGCGGCAATCAACAGAACCGGAGA 517
consensus_4895#1      -TTTCTGTGCTATCTGCTTCACTGAGGCAC-----TGTTGACTTTCAGTTTAACAGAAAA 330
                       *  * * **  *** * **  **   *       **  * *  ***    *** * * *

consensus_4895#0      GAGAACTAATTTTTTTTAATCCTTGTGGCCGGTCCTTAGCCATAAGGACGGCT-CATC-C 2217
consensus_4895#2      GAGAACTAATTTTTTTTAATCCTTGTGGCCGGTCCTTAGCCATAAGGACGGCT-CATC-C 575
consensus_4895#1      TAGACTTATGATCCTGCAAGTTGGAAAAACATAATCACTTCTTGCAGTTTGCTGCATTGT 390
                       ***  **   *  *  **          *          * *   *   *** ***   

consensus_4895#0      AAAAGCCTCCTAGAAGGATCACCTCCACAATGTATAAATGCTTCTCAAGGGGCTTAAGAC 2277
consensus_4895#2      AAAAGCCTCCTAGAAGGATCACCTCCACAATGTATAAATGCTTCTCAAGGGGCTTAAGAC 635
consensus_4895#1      TTAAGCAATTTGGAGCCCTTTTTTTTATTGCATGCAACTG---TGCAGTAGATCTGGTCT 447
                        ****    * **    *    *  *     *  ** **     **   *   *     

consensus_4895#0      CCTCCTTATTTCTACATTGTGCATGACCTAATCAACTTGCCCATGTATGTACTTTTTT-A 2336
consensus_4895#2      CCTCCTTATTTCTACATTGTGCATGACCTAAAAAAAAAAAA------------------- 676
consensus_4895#1      CCTGGTCCTGTTTACCTCTTGC----TGTAATCAACTTGCCCATGTATGTACTTTTTTTA 503
                      ***  *  * * *** *  ***      ***  **                         

consensus_4895#0      CAGTATTTTTAGGTAGAATACCATTTTATAATTGCTAGGAATCGCCAACGCTCGTTTCCA 2396
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      CAGTATTTTTAAGTAGAATACCATTTTATAATTGCTAGGAATCGCCAACGCTCGTTTCCA 563
                                                                                  

consensus_4895#0      ATAGTTCTCTTGTTAGTTTGTGATTATAGCTTTCCTAAACGTATTTCAACATGATTAGCT 2456
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      GTAGTTCTCTTGTTAGTTTGTGATTATAGCTTTCCTAAACGTATTTCAGCAGGATTAGCT 623
                                                                                  

consensus_4895#0      CTCTTTCATCCAACCATCTCCGTGAATGCTGAAA-------------------------- 2490
consensus_4895#2      ------------------------------------------------------------
consensus_4895#1      CTCTTTCATCCAACCATCTCTGTGAATGCTCAAAATTCAATATGAAAAAAAAGCTTGCCT 683
                                                                                  

consensus_4895#0      --------------
consensus_4895#2      --------------
consensus_4895#1      TTTATCTTAAAAAA 697


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)