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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_4988#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1818 fasta sequence
[AACTCCGCCCCCGCCTCCTCGCTCCTCCCCCGCTGCCATAGCCCGCCGCCTCCTCGCTCCTCCTCGCCGCCCGCCCCACGAATCCCCGCGCCTCCTAGCTTCTCCTCCGCGCCCGCGAATCCCCGCCGCCTCCTCGCTCCGCGCGCATCCTCCCTCCTCGCGACGGGGCAGCGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGACGAGGTCGTCCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCCGGAGCCGAGTTCTTCCCCATCCGCATTGGATCTGAATGCACCACATATCTTCCCCTCTGGAAATTATTATTTTTGGATGAAATTGACGGAATACCAATGGCTATTGCAACAAGACGTGAGGACTGGCAAGCCATCTCTTCATATATTTCTTGCTGATATGAGAACGTTCGAGGTATTGCCATATAATTGATTTGTATTTCAAGCTCCTCCTGCTGTAGCAGCAGTAAAAAAAATGCTCGAATGTGATTGGGCGACACATGTACATATGCTTTTAAGTCCCTTCAGCGACATCTGGAAACCTAGGATCTCACCTACAAAAATAGGAATCCAGGAGTTGGAGCCATTCGAACATGCAGCATGTCTCTTGCTAATGTCTTCCTGAGCTTTCAAATCATAAGGCCCTTGCCTCACTGATCAAAATATTCAGGTCACTAGAGGTTCTAATTTGCTTGCAATCCTTATGGTTTCCACTCATCACAGTGATAAGGCACCATATTCTTATGGCCAGTGCTTCTATGTTCTGAGCTTACTGGTATCCATATTTTTAAGCACTCTATTTCTTTGCTCTGGTTTCTTTTTTTGCAACCAGTTTCTGATGGAACATTTCTTATGGCTAGAAATTGTCACGTAATCTTCAATGCGCTCTAGAAATTTCAGATTGAGCTATTTGAATTTTGCTATGTTAATTTGAATAATACAGTATTCCAAAGCGGCAGTGGATCATTATAACCAACTACCACAAACTATTCAATTGCAGAATTTCTGCATTCCAATTTTTGCATTTCTCAATTTAATCATGTATTTTGGTTTGAGTAATTGCAAAGTAAAATTGATTTTGTAATTGTAAAAATGAATGAATTTTCTGGACAACATTTAATGTGATTTTATCAAAACACAATGAACCTTTTAATTTGTCCGTATAGTTCTGTTTTCTTTTATTTTCAAAAGTAAGATCCTCAGTATAAGCTTTTGTTTGTGGATCTCTTAATAATGAATATTGGGGGTCCAATCCTCTCTTGCTCCACCGTTGGACCAGTAGTAGCAGCAGGTTGGAAGCTGGTGAACACGATCTCAGGGAAGGACACAATGGCGGCTTCGTACGATCTCACATATGACAATTCTATCATTGCCTTAGATTTTACCAACCAAAGATGCAAGGGGTACTCATTCTTTTGATTTTGTCCAGATGGACAGCTCCAGTCCATAACATTCTATCTACACAGTCAACGACTCAGTTAATAATAAAACTGAAAAAATGTTCTCTTTTATTTTTAAATAAGATTTTCACACAACCTGAAAGTAAGATATCAAAGGAGCACTGGCCTGATATAAATGATTTTTTTCTGACGAATGTGGACTACCAATGTAATGCACATGCCTAAGATATTTAAGGTTTTCTTTTTTCTGCAGTACTTAAAGACTTGTATTTTGTAATATTGTAGGTTAAATCTCAACTTCTGATGTATCTCAAGTGTAAATATGGTCATTGTCATATTGCTAATATTTTGGATTTAATCAAATAAATGATGACC]
[+] EMBL AK070698 [AACTCCGCCCCCGCCTCCTCGCTCCTCCCCCGCTGCCATAGCCCGCCGCCTCCTCGCTCCTCCTCGCCGCCCGCCCCACGAATCCCCGCGCCTCCTAGCTTCTCCTCCGCGCCCGCGAATCCCCGCCGCCTCCTCGCTCCGCGCGCATCCTCCCTCCTCGCGACGGGGCAGCGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGACGAGGTCGTCCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCCGGAGCCGAGTTCTTCCCCATCCGCATTGGATCTGAATGCACCACATATCTTCCCCTCTGGAAATTATTATTTTTGGATGAAATTGACGGAATACCAATGGCTATTGCAACAAGACGTGAGGACTGGCAAGCCATCTCTTCATATATTTCTTGCTGATATGAGAACGTTCGAGGTATTGCCATATAATTGATTTGTATTTCAAGCTCCTCCTGCTGTAGCAGCAGTAAAAAAAATGCTCGAATGTGATTGGGCGACACATGTACATATGCTTTTAAGTCCCTTCAGCGACATCTGGAAACCTAGGATCTCACCTACAAAAATAGGAATCCAGGAGTTGGAGCCATTCGAACATGCAGCATGTCTCTTGCTAATGTCTTCCTGAGCTTTCAAATCATAAGGCCCTTGCCTCACTGATCAAAATATTCAGGTCACTAGAGGTTCTAATTTGCTTGCAATCCTTATGGTTTCCACTCATCACAGTGATAAGGCACCATATTCTTATGGCCAGTGCTTCTATGTTCTGAGCTTACTGGTATCCATATTTTTAAGCACTCTATTTCTTTGCTCTGGTTTCTTTTTTTGCAACCAGTTTCTGATGGAACATTTCTTATGGCTAGAAATTGTCACGTAATCTTCAATGCGCTCTAGAAATTTCAGATTGAGCTATTTGAATTTTGCTATGTTAATTTGAATAATACAGTATTCCAAAGCGGCAGTGGATCATTATAACCAACTACCACAAACTATTCAATTGCAGAATTTCTGCATTCCAATTTTTGCATTTCTCAATTTAATCATGTATTTTGGTTTGAGTAATTGCAAAGTAAAATTGATTTTGTAATTGTAAAAATGAATGAATTTTCTGGACAACATTTAATGTGATTTTATCAAAACACAATGAACCTTTTAATTTGTCCGTATAGTTCTGTTTTCTTTTATTTTCAAAAGTAAGATCCTCAGTATAAGCTTTTGTTTGTGGATCTCTTAATAATGAATATTGGGGGTCCAATCCTCTCTTGCTCCACCGTTGGACCAGTAGTAGCAGCAGGTTGGAAGCTGGTGAACACGATCTCAGGGAAGGACACAATGGCGGCTTCGTACGATCTCACATATGACAATTCTATCATTGCCTTAGATTTTACCAACCAAAGATGCAAGGGGTACTCATTCTTTTGATTTTGTCCAGATGGACAGCTCCAGTCCATAACATTCTATCTACACAGTCAACGACTCAGTTAATAATAAAACTGAAAAAATGTTCTCTTTTATTTTTAAATAAGATTTTCACACAACCTGAAAGTAAGATATCAAAGGAGCACTGGCCTGATATAAATGATTTTTTTCTGACGAATGTGGACTACCAATGTAATGCACATGCCTAAGATATTTAAGGTTTTCTTTTTTCTGCAGTACTTAAAGACTTGTATTTTGTAATATTGTAGGTTAAATCTCAACTTCTGATGTATCTCAAGTGTAAATATGGTCATTGTCATATTGCTAATATTTTGGATTTAATCAAATAAATGATGACC]
consensusID : consensus_4988#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1448 fasta sequence
[CCGCCGCGACAACTTCGCCCCCAAAATCGCCCCCGCCTCCTCGCCCCTCCTCGCCGCTGCCTCCTCGCTCCTCCTCGCCGCCCGGCGAATCCCCGCGCCTCCTCGCTTCTCCTCCACACCCACGAATCCCCGCCGTCTCCTCGCTCCGTGCGCATCCTCCCTCCTCCTCGCGACGGGGCAACGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGATTAGGTCATCCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCTGGAGCCGAGTTCTTCCCCATCCGTGGTGGCCGCCGAAGTCCACCGCTGCCCCCGACGAAGTCGAGGTCTTCCCCAACCGCGGCCTGCCCCCGCCAGCGCTTGAATACACTCAACCGATCCAACATCCTCCACTTGCGCCGGCGAGAGCCTTCCTCCACTCCAGCGCCTAACCGTACACTCCACCGCAGCTCGGTCATCCTTAGTCGCACACCGATACACGAAGGCGAGGTCGGAGCCCCTGGTGCCGCCACGAGCGAGAGGCAATTCGCCGTTGCGGCCGCGCTCGTCGTGCAAATACCGGAACGCAAGTGGTCCCTTTCCTGCCGCCGCAAGCGAGCAGTTGCGTCGCTACATGCACCCCCAAGGTCTTCCTCCACCGATCTGTCCTGAACATGCAAATGCTGATGTGATGTTTTGGTTGCTCAGATCCATCAGTGGGATTTCATCAACGACAAACATTGATAGTGGTTCTGACAAATATTCATGTATAGTGGTTCGATCTACATCAGCTCGGCCCGGTAATGCAGGAAGCTTTACGTCACCATTGCTTGCAGTGACAAGTAAATAATACACATCATGTTCGCTTCTTTTGCAAAGCTGTTATGCCGCTGCCAGTTAATTGCTAATTGTATATCTCTGAAATTAATTTATACAGATCGATGGGAATACCACTAATTTAAGTGCTCTCGAGTTAAAGAAGATAGCAAGCTTGGATGAGGTATGCTTTGCTCAATTGTAAGCAGTAGCAAGCTAAGGTTCAACAGAACCATGAGTACAAGCAGCGGAAGGATGCATCAATCTACAATTGCCATAGTCTAATAGTGGAACCCTTTCCTTGAGGGAATTCCATGAAAGATATTGGTCTCCAGATTTTAAGATTGGTAGATCCTTTCGTGGCTGCCACTTCAACTGCAGATCACATGAACTTCTGTGGACCCACGGCAGGAGCTGTATACACCTCATTGGTGATCATGTAAATGCTATTTTTAGTTGCTGGCCATGAAGGATATATTTGAAGTATTGTTGGTGAAGATCTGAGTCTTTTTTCCTGATAAGATATTGTAGGCTGTGGGGTTTAATTCAATACCATAAATACAAATATCTTGCTTTGAGCTTTTCAAGTGTTTATCAAGCTATGACAAATTATATGTT]
[+] EMBL AK073295 [CCGCCGCGACAACTTCGCCCCCAAAATCGCCCCCGCCTCCTCGCCCCTCCTCGCCGCTGCCTCCTCGCTCCTCCTCGCCGCCCGGCGAATCCCCGCGCCTCCTCGCTTCTCCTCCACACCCACGAATCCCCGCCGTCTCCTCGCTCCGTGCGCATCCTCCCTCCTCCTCGCGACGGGGCAACGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGATTAGGTCATCCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCTGGAGCCGAGTTCTTCCCCATCCGTGGTGGCCGCCGAAGTCCACCGCTGCCCCCGACGAAGTCGAGGTCTTCCCCAACCGCGGCCTGCCCCCGCCAGCGCTTGAATACACTCAACCGATCCAACATCCTCCACTTGCGCCGGCGAGAGCCTTCCTCCACTCCAGCGCCTAACCGTACACTCCACCGCAGCTCGGTCATCCTTAGTCGCACACCGATACACGAAGGCGAGGTCGGAGCCCCTGGTGCCGCCACGAGCGAGAGGCAATTCGCCGTTGCGGCCGCGCTCGTCGTGCAAATACCGGAACGCAAGTGGTCCCTTTCCTGCCGCCGCAAGCGAGCAGTTGCGTCGCTACATGCACCCCCAAGGTCTTCCTCCACCGATCTGTCCTGAACATGCAAATGCTGATGTGATGTTTTGGTTGCTCAGATCCATCAGTGGGATTTCATCAACGACAAACATTGATAGTGGTTCTGACAAATATTCATGTATAGTGGTTCGATCTACATCAGCTCGGCCCGGTAATGCAGGAAGCTTTACGTCACCATTGCTTGCAGTGACAAGTAAATAATACACATCATGTTCGCTTCTTTTGCAAAGCTGTTATGCCGCTGCCAGTTAATTGCTAATTGTATATCTCTGAAATTAATTTATACAGATCGATGGGAATACCACTAATTTAAGTGCTCTCGAGTTAAAGAAGATAGCAAGCTTGGATGAGGTATGCTTTGCTCAATTGTAAGCAGTAGCAAGCTAAGGTTCAACAGAACCATGAGTACAAGCAGCGGAAGGATGCATCAATCTACAATTGCCATAGTCTAATAGTGGAACCCTTTCCTTGAGGGAATTCCATGAAAGATATTGGTCTCCAGATTTTAAGATTGGTAGATCCTTTCGTGGCTGCCACTTCAACTGCAGATCACATGAACTTCTGTGGACCCACGGCAGGAGCTGTATACACCTCATTGGTGATCATGTAAATGCTATTTTTAGTTGCTGGCCATGAAGGATATATTTGAAGTATTGTTGGTGAAGATCTGAGTCTTTTTTCCTGATAAGATATTGTAGGCTGTGGGGTTTAATTCAATACCATAAATACAAATATCTTGCTTTGAGCTTTTCAAGTGTTTATCAAGCTATGACAAATTATATGTT]
consensusID : consensus_4988#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1163 fasta sequence
[GCCTCCTCGCTCCGTGCGCATCCTCCCTCCTCCTCGCGACGGGGCAACGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGATTAGGTCATCCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCTGGAGCCGAGTTCTTCCCCATCCGTGGTGGCCGCCGAAGTCCACCGCTGCCCCCGACGAAGTCGAGGTCTTCCCCAACCGCGGCCTGCCCCCGCCAGCGCTTGAATACACTCAACCGATCCAACATCCTCCACTTGCGCCGGCGAGAGCCTTCCTCCACTCCAGCGCCTCACCGTACACTCCACCGCAGCTCGGTCATCCTTAGTCGCACACCGATACACGAAGGCGAGGTCGGAGCCCCTGGTGCCGCCACGAGCGAGAGGCAATTCGCCGTTGCGGCCGCGCTCGTCGTGCAAATACCGGAACGCAAGTGGTCCCTTTCCTGCCGCCGCAAGCGAGCAGTTGCGTCGCTACATGCACCCCCAAGGTCTTCCTCCACCGATCTGTCCTATCCATCAGTGGGATTTCATCAACGACAAACATTGATAGTGGTTCTGACAAATATTCATGTATAGTGGTTCGATCTACATCAGCTCGGCCCGGTAATGCAGGAAGCTTTACGTCACCATTGCTTGCAGTGACAAGGAATACCACTAATTTAAGTGCTCTCGAGTTAAAGAAGATAGCAAGCTTGGATGAGGTATGCTTTGCTCAATTGTAAGCAGTAGCAAGCTAAGGTTCAACAGAACCATGAGTACAAGCAGCGGAAGGATGCATCAATCTACAATTGCCATAGGAAGATGCCTGATGCTAATGTCTTCTCAAGCTTTTGGATTTCTAATAGTGGAACCCTTTCCTTGAGGGAATTCCATGAAAGATATTGGTCTCCAGATTTTAAGATTGGTAGATCCTTTCGTGGCTGCCACTTCAACTGCAGATCACATGAACTTCTGTGGACCCACGGCAGGAGCTGTATACACCTCATTGGTGATCATGTAAATGCTATTTTTAGTTGCTGGCCATGAAGGATATATTTGAAGTATTGTTGGTGAAGATCTGAGTCTTTTTTCCTGATAAGATATTGTAGGCTGTGGGGTTTAATTCAATACCATAAATACAAATA]
[+] EMBL AK060473 [GCCTCCTCGCTCCGTGCGCATCCTCCCTCCTCCTCGCGACGGGGCAACGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGATTAGGTCATCCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCTGGAGCCGAGTTCTTCCCCATCCGTGGTGGCCGCCGAAGTCCACCGCTGCCCCCGACGAAGTCGAGGTCTTCCCCAACCGCGGCCTGCCCCCGCCAGCGCTTGAATACACTCAACCGATCCAACATCCTCCACTTGCGCCGGCGAGAGCCTTCCTCCACTCCAGCGCCTCACCGTACACTCCACCGCAGCTCGGTCATCCTTAGTCGCACACCGATACACGAAGGCGAGGTCGGAGCCCCTGGTGCCGCCACGAGCGAGAGGCAATTCGCCGTTGCGGCCGCGCTCGTCGTGCAAATACCGGAACGCAAGTGGTCCCTTTCCTGCCGCCGCAAGCGAGCAGTTGCGTCGCTACATGCACCCCCAAGGTCTTCCTCCACCGATCTGTCCTATCCATCAGTGGGATTTCATCAACGACAAACATTGATAGTGGTTCTGACAAATATTCATGTATAGTGGTTCGATCTACATCAGCTCGGCCCGGTAATGCAGGAAGCTTTACGTCACCATTGCTTGCAGTGACAAGGAATACCACTAATTTAAGTGCTCTCGAGTTAAAGAAGATAGCAAGCTTGGATGAGGTATGCTTTGCTCAATTGTAAGCAGTAGCAAGCTAAGGTTCAACAGAACCATGAGTACAAGCAGCGGAAGGATGCATCAATCTACAATTGCCATAGGAAGATGCCTGATGCTAATGTCTTCTCAAGCTTTTGGATTTCTAATAGTGGAACCCTTTCCTTGAGGGAATTCCATGAAAGATATTGGTCTCCAGATTTTAAGATTGGTAGATCCTTTCGTGGCTGCCACTTCAACTGCAGATCACATGAACTTCTGTGGACCCACGGCAGGAGCTGTATACACCTCATTGGTGATCATGTAAATGCTATTTTTAGTTGCTGGCCATGAAGGATATATTTGAAGTATTGTTGGTGAAGATCTGAGTCTTTTTTCCTGATAAGATATTGTAGGCTGTGGGGTTTAATTCAATACCATAAATACAAATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_4988#1 CCGCCGCGACAACTTCGCCCCCAAAATCGCCCCCGCCTCCTCGCCCCTCCTCGCCGCTGC 60
consensus_4988#2 ------------------------------------------------------------
consensus_4988#0 ----------AACTCCGCCCCCGCCTCCTCGCTC-CTCCCCCGCTGCCATAGCCCGCCGC 49
consensus_4988#1 CTCCTCGCTCCTCCTCGCCGCCCG----GCGAATCCCCGCGCCTCCTCGCTTCTCCTCCA 116
consensus_4988#2 ------------------------------------------------------------
consensus_4988#0 CTCCTCGCTCCTCCTCGCCGCCCGCCCCACGAATCCCCGCGCCTCCTAGCTTCTCCTCCG 109
consensus_4988#1 CACCCACGAATCCCCGCCGTCTCCTCGCTCCGTGCGCATCCTCCCTCCTCCTCGCGACGG 176
consensus_4988#2 ------------------GCCTCCTCGCTCCGTGCGCATCCTCCCTCCTCCTCGCGACGG 42
consensus_4988#0 CGCCCGCGAATCCCCGCCGCCTCCTCGCTCCGCGCGCATCCTCCCTCCT---CGCGACGG 166
* ************ **************** ********
consensus_4988#1 GGCAACGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGATTAGGTCAT 236
consensus_4988#2 GGCAACGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGATTAGGTCAT 102
consensus_4988#0 GGCAGCGAGGTCGTCCCCTTCCGCTGCCACCCCCGCTGCCCACGCCGGAGACGAGGTCGT 226
**** ********************************************** ***** *
consensus_4988#1 CCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCT 296
consensus_4988#2 CCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCT 162
consensus_4988#0 CCCCAGCCACCGCCGGAGCCGTGGTCTTCCCCGGAGCCGACGTCGTCCCCAGTTGCCGCC 286
***********************************************************
consensus_4988#1 GGAGCCGAGTTCTTCCCCATCCGTGGTGGCCGCCGAAGTCCACCGC-----TGCCCCCGA 351
consensus_4988#2 GGAGCCGAGTTCTTCCCCATCCGTGGTGGCCGCCGAAGTCCACCGC-----TGCCCCCGA 217
consensus_4988#0 GGAGCCGAGTTCTTCCCCATCCGCATTGG--ATCTGAATGCACCACATATCTTCCCCTCT 344
*********************** *** * * * **** * * ****
consensus_4988#1 CGAAGTCGAGGTCTTC---CCCAACCG-CGGCCTGCC---------CCCGCCAGCGCTTG 398
consensus_4988#2 CGAAGTCGAGGTCTTC---CCCAACCG-CGGCCTGCC---------CCCGCCAGCGCTTG 264
consensus_4988#0 GGAAATTATTATTTTTGGATGAAATTGACGGAATACCAATGGCTATTGCAACAAGACGTG 404
*** * * ** ** * *** * ** * ** * **
consensus_4988#1 AATACACTCAACCGATC-CAACATCCTCCACTTGCGCCGGCGAGAGCCTTCCTCCACTCC 457
consensus_4988#2 AATACACTCAACCGATC-CAACATCCTCCACTTGCGCCGGCGAGAGCCTTCCTCCACTCC 323
consensus_4988#0 AGGACTGGCAAGCCATCTCTTCATATATTTCTTGCTGATATGAGAACGTTCGAG-GTATT 463
* ** *** * *** * *** ***** **** * ***
consensus_4988#1 AGCGCCTAACCGTACACTCCACCGCAGCTCGGTCATCCTTAGTCGCAC----ACCGATAC 513
consensus_4988#2 AGCGCCTCACCGTACACTCCACCGCAGCTCGGTCATCCTTAGTCGCAC----ACCGATAC 379
consensus_4988#0 GCCATATAATTGATTTGTATTTCA-AGCTCCTCCTGCTGTAGCAGCAGTAAAAAAAATGC 522
* * * * * * ***** * * *** *** * ** *
consensus_4988#1 ACGAAGGCGA--GGTCGGAGCCCCTG---GTGCCGCCACGAGCGAGAGGCAATTCGCCGT 568
consensus_4988#2 ACGAAGGCGA--GGTCGGAGCCCCTG---GTGCCGCCACGAGCGAGAGGCAATTCGCCGT 434
consensus_4988#0 TCGAATGTGATTGGGCGACACATGTACATATGCTTTTAAGTCCCTTCAGCGACATCTGGA 582
**** * ** ** ** * * *** * * * ** * *
consensus_4988#1 TGCGGCCGCGCTCGTCGTGCAAATACCGGAACGCAAG---TGGTCCCTTTCCTGC-CGCC 624
consensus_4988#2 TGCGGCCGCGCTCGTCGTGCAAATACCGGAACGCAAG---TGGTCCCTTTCCTGC-CGCC 490
consensus_4988#0 AACCTAGGATCTCACC-TACAAAAATAGGAATCCAGGAGTTGGAGCCATTCGAACATGCA 641
* * *** * * **** * **** ** * *** ** *** * **
consensus_4988#1 GCAAGCGAGCAGTTG-CGTCGCTACATGC------ACCCCCAAGGTCTTCCTCCACCGAT 677
consensus_4988#2 GCAAGCGAGCAGTTG-CGTCGCTACATGC------ACCCCCAAGGTCTTCCTCCACCGAT 543
consensus_4988#0 GCATGTCTCTTGCTAATGTCTTCCTGAGCTTTCAAATCATAAGGCCCTTGCCTCACTGAT 701
*** * * * *** ** * * * * *** * *** ***
consensus_4988#1 C----TGTCCTGAACATGCAAAT-----GCTGATGTGATGTTTTGGTTGCTCAGATCCAT 728
consensus_4988#2 C----TGTCCT-------------------------------------------ATCCAT 556
consensus_4988#0 CAAAATATTCAGGTCACTAGAGGTTCTAATTTGCTTGCAATCCTTATGGTTTCCACTCAT 761
* * * * * ***
consensus_4988#1 CA--GTGGGATTTCATCAA----CGACAAACATTGATAGTG-GTTCTGA-----CAAATA 776
consensus_4988#2 CA--GTGGGATTTCATCAA----CGACAAACATTGATAGTG-GTTCTGA-----CAAATA 604
consensus_4988#0 CACAGTGATAAGGCACCATATTCTTATGGCCAGTGCTTCTATGTTCTGAGCTTACTGGTA 821
** *** * ** ** * ** ** * * ******* * **
consensus_4988#1 TTCATGTATAGTGGTTCGATCTACATCAGCTCGG---CCCGGTAATGCAGGAAGCTTTAC 833
consensus_4988#2 TTCATGTATAGTGGTTCGATCTACATCAGCTCGG---CCCGGTAATGCAGGAAGCTTTAC 661
consensus_4988#0 TCCATATTTTTAAGCACTCTATTTCTTTGCTCTGGTTTCTTTTTTTGCAACCAGTTTCTG 881
* *** * * * * * * * **** * * * **** ** **
consensus_4988#1 GTC-ACCATTGCTTGCAGTGACAAGTAAATAATACACATCATGTTCGCT-------TCTT 885
consensus_4988#2 GTC-ACCATTGCTTGCAGTGACAAG----------------------------------- 685
consensus_4988#0 ATGGAACATTTCTTATGGCTAGAAATTGTCACGTAATCTTCAATGCGCTCTAGAAATTTC 941
* * **** *** * * **
consensus_4988#1 TTGCAAAGCTGTTATGCCGCTGCCAGTTAATTGCTAATTGTATATC--TCTGAAATTAAT 943
consensus_4988#2 ------------------------------------------------------------
consensus_4988#0 AGATTGAGCTATTTGAATTTTGCTATGTTAATTTGAATAATACAGTATTCCAAAGCGGCA 1001
consensus_4988#1 TTATACAGATCGATGGGAATACCACTAA---TTTAAGTGCT-----------CTCGAGTT 989
consensus_4988#2 ----------------GAATACCACTAA---TTTAAGTGCT-----------CTCGAGTT 715
consensus_4988#0 GTGGATCATTATAACCAACTACCACAAACTATTCAATTGCAGAATTTCTGCATTCCAATT 1061
* ****** ** ** ** *** ** * **
consensus_4988#1 AAAGAAGATAGCAAGCTTGG-ATGAGGTATGCTTTGCTCAATTGTAA-GCAGTAGCAAGC 1047
consensus_4988#2 AAAGAAGATAGCAAGCTTGG-ATGAGGTATGCTTTGCTCAATTGTAA-GCAGTAGCAAGC 773
consensus_4988#0 TTTGCATTTCTCAATTTAATCATGTATTTTGGTTTGAGTAATTGCAAAGTAAAATTGATT 1121
* * * *** * *** * ** **** ***** ** * * * *
consensus_4988#1 TAAGGTTCAACAGAACCA-TGAGTAC---AAGCAGCGG-----AAGGATGCATCAATCTA 1098
consensus_4988#2 TAAGGTTCAACAGAACCA-TGAGTAC---AAGCAGCGG-----AAGGATGCATCAATCTA 824
consensus_4988#0 TTGTAATTGTAAAAATGAATGAATTTTCTGGACAACATTTAATGTGATTTTATCAAAACA 1181
* * * ** * *** * ** * * * ***** *
consensus_4988#1 CAATTGCCATAG-----------------------------------------TCTAAT- 1116
consensus_4988#2 CAATTGCCATAGGAAGATGCCTG-ATGCTAATGTCTTCTCAAGCTTTTGGATTTCTAAT- 882
consensus_4988#0 CAATGAACCTTTTAATTTGTCCGTATAGTTCTGTTTTCTTTTATTTTCAAAAGTAAGATC 1241
**** * * * **
consensus_4988#1 ---AGTGGAACCCTTTCCTTGAGGGAATTCCA-TGAAAGATATTGGTCTCCAGATTTTAA 1172
consensus_4988#2 ---AGTGGAACCCTTTCCTTGAGGGAATTCCA-TGAAAGATATTGGTCTCCAGATTTTAA 938
consensus_4988#0 CTCAGTATAAGCTTTTGTTTGTGGATCTCTTAATAATGAATATTGGGGGTCCAATCCTCT 1301
*** ** * *** *** ** * * * * ******* * ** *
consensus_4988#1 GAT------TGGTAGATCCTTTCGTGGCTGCCACTTCAACTGCAGATCACATGAACTTCT 1226
consensus_4988#2 GAT------TGGTAGATCCTTTCGTGGCTGCCACTTCAACTGCAGATCACATGAACTTCT 992
consensus_4988#0 CTTGCTCCACCGTTGGACCAGTAGTAGCAGCAGGTTGGAAGCTGGTGAACACGATCTCAG 1361
* ** * ** * ** ** ** ** * * *** ** **
consensus_4988#1 GTGGACCCACGGCAGGAGCTGTATAC-ACCTCAT---TGGTGATCATGTAAATGCTAT-- 1280
consensus_4988#2 GTGGACCCACGGCAGGAGCTGTATAC-ACCTCAT---TGGTGATCATGTAAATGCTAT-- 1046
consensus_4988#0 GGAAGGACACAATGGCGGCTTCGTACGATCTCACATATGACAATTCTATCATTGCCTTAG 1421
* *** * *** *** * **** ** ** * * * *** *
consensus_4988#1 -TTTTAGTTGCTGGCCATGAAGGATATATTTGAAGTATTGTTGGTGAAGATCTGAGTCTT 1339
consensus_4988#2 -TTTTAGTTGCTGGCCATGAAGGATATATTTGAAGTATTGTTGGTGAAGATCTGAGTCTT 1105
consensus_4988#0 ATTTTACCAACCAAAGATGCAAGGGGTACTCATTCTTTTGATTTTGTCCAGATGGACAGC 1481
***** * *** * * ** * * *** * ** * **
consensus_4988#1 TTTTCCTGATAAGATATTGT--AGGCTGTGGG-GTTTAATTCAATACCATAAATACAAAT 1396
consensus_4988#2 TTTTCCTGATAAGATATTGT--AGGCTGTGGG-GTTTAATTCAATACCATAAATACAAAT 1162
consensus_4988#0 TCCAGTCCATAACATTCTATCTACACAGTCAACGACTCAGTTAATAATAAAACTGAAAAA 1541
* **** ** * * * * ** * * * * **** * ** * ***
consensus_4988#1 ATCTTGCTTTGAGCTTTTCAA-GTGTTTATCAAGCTATGACAAATTATATGTT------- 1448
consensus_4988#2 A----------------------------------------------------------- 1163
consensus_4988#0 ATGTTCTCTTTTATTTTTAAATAAGATTTTCACACAACCTGAAAGTAAGATATCAAAGGA 1601
*
consensus_4988#1 ------------------------------------------------------------
consensus_4988#2 ------------------------------------------------------------
consensus_4988#0 GCACTGGCCTGATATAAATGATTTTTTTCTGACGAATGTGGACTACCAATGTAATGCACA 1661
consensus_4988#1 ------------------------------------------------------------
consensus_4988#2 ------------------------------------------------------------
consensus_4988#0 TGCCTAAGATATTTAAGGTTTTCTTTTTTCTGCAGTACTTAAAGACTTGTATTTTGTAAT 1721
consensus_4988#1 ------------------------------------------------------------
consensus_4988#2 ------------------------------------------------------------
consensus_4988#0 ATTGTAGGTTAAATCTCAACTTCTGATGTATCTCAAGTGTAAATATGGTCATTGTCATAT 1781
consensus_4988#1 -------------------------------------
consensus_4988#2 -------------------------------------
consensus_4988#0 TGCTAATATTTTGGATTTAATCAAATAAATGATGACC 1818
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||