cluster # 5280

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Oryza sativa
cluster # 5280 cluster # 5280 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5280#0 length = 553 sequences # 3

consensusID : consensus_5280#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 553
fasta sequence

                              [CACTCCAGAACCCAAAACAGCTGCAGTGCCATCAGTTTCAGTTTCAGTTTGAGTGAGCTCGAGGGAGCTTAGGGTGGCTGCCATGCTGGTGGTGGAGCTGGGCGTGTGGCTCATCCCGCTCACCCTCTTCTTCGTCCCGTGCCGGCGGATCGTGCTCCTCCTCAAGCAGCTCCAGGGGTTCCACCGGAGCATGACGCGGCCGCGGCGGCGCGCCTCCGCCGACATGCTCAGCCGATTCTCCGGGCTCAACGACAACATGGTCTTCGTGCTCTGAGAAAGTCTGAAGAAGGTATATGTGGGTGCTTTTCTTGGTTGATCTAGTCGGAAACTCAGATGGCTTTTGGCCATGGTGCTGGATTATTGCTGATGCTAATTCAGCTCGTGCTGTAGCTCTTCATCTCTTTCTCTTTTTGTTCGTTGGAAGATCCAAAGGAGTTCTCTCTCTGAATTTTTCATCTTTCTGTGTACCATAAGCTAGCTCCAGTAATCTGAGATGTACATGAACTTACTGCAAAAAAAATCTTGTGTACCATAAGCAAAGCTCAAGTGGTCT]

[+] EMBL AK072776             [CACTCCAGAACCCAAAACAGCTGCAGTGCCATCAGTTTCAGTTTCAGTTTGAGTGAGCTCGAGGGAGCTTAGGGTGGCTGCCATGCTGGTGGTGGAGCTGGGCGTGTGGCTCATCCCGCTCACCCTCTTCTTCGTCCCGTGCCGGCGGATCGTGCTCCTCCTCAAGCAGCTCCAGGGGTTCCACCGGAGCATGACGCGGCCGCGGCGGCGCGCCTCCGCCGACATGCTCAGCCGATTCTCCGGGCTCAACGACAACATGGTCTTCGTGCTCTGAGAAAGTCTGAAGAAGGTATATGTGGGTGCTTTTCTTGGTTGATCTAGTCGGAAACTCAGATGGCTTTTGGCCATGGTGCTGGATTATTGCTGATGCTAATTCAGCTCGTGCTGTAGCTCTTCATCTCTTTCTCTTTTTGTTCGTTGGAAGATCCAAAGGAGTTCTCTCTCTGAATTTTTCATCTTTCTGTGTACCATAAGCTAGCTCCAGTAATCTGAGATGTACATGAACTTACTGCATTTTTCATCTTGTGTACCATAAGCAAAGCTCAAGTGGTCT]
[-] EMBL CF298662             [                            CCATCAGTTTCAGTTTCAGTTTGAGTGAGCTCGAGGGAGCTTAGGGTGGCTGCCATGCTGGTGGTGGAGCTGGGCGTGTGGCTCATCCCGCTCACCCTCTTCTTCGTCCCGTGCCGGCGGATCGTGCTCCTCCTCAAGCAGCTCCAGGGGTTCCACCGGAGCATGACGCGGCCGCGGCGGCGCGCCTCCGCCGACATGCTCAGCCGATTCTCCGGGCTCAACGACAACATGGTCTTCGTGCTCTGAGAAAGTCTGAAGAAGGTATATGTGGGTGCTTTTCTTGGTTGATCTAGTCGGAAACTCAGATGGCTTTTGGCCATGGTGCTGGATTATTGCTGATGCTAATTCAGCTCGTGCTGTAGCTCTTCATCTCTTTCTCTTTTTGTTCGTTGGAAGATCCAAAGGAGTTCTCTCTCTGAATTTTTCATCTTTCTGTGTACCATAAGCTAGCTCCAGTAATCTGAGATGTACATGAACTTACTGCAAAAAAAAa                                ]
[+] EMBL CF298663             [                                                                 AGCTTAGGGTGGCTGCCATGCTGGTGGTGGAGCTGGGCGTGTGGCTCATCCCGCTCACCCTCTTCTTCGTCCCGTGCCGGCTGATCGTGCTCCTCCTCAAGCAGCTCCAGGGGTTCCACCGGAGCATGACGCGGCCGCGGCGGCGCGCCTCCGCCGACATGCTCAGCCGATTCTCCGGGCTCAACGACAACATGGTCTTCGTGCTCTGAGAAAGTCTGAAGAAGGTATATGTGGGTGCTTTTCTTGGTTGATCTAGTCGGAAACTCAGATGGCTTTTGGCCATGGTGCTGGATTATTGCTGATGCTAATTCAGCTCGTGCTGTAGCTCTTCATCTCTTTCTCTTTTTGTTCGTTGGAAGATCCAAAGGAGTTCTCTCTCTGAATTTTTCATCTTTCTGTGTACCATAAGCTAGCTCCAGTAATCTGAGATGTACATGAACTTACTGCAAAAAAAA                                 ]




>consensus_5280#0
CACTCCAGAACCCAAAACAGCTGCAGTGCCATCAGTTTCAGTTTCAGTTTGAGTGAGCTC
GAGGGAGCTTAGGGTGGCTGCCATGCTGGTGGTGGAGCTGGGCGTGTGGCTCATCCCGCT
CACCCTCTTCTTCGTCCCGTGCCGGCGGATCGTGCTCCTCCTCAAGCAGCTCCAGGGGTT
CCACCGGAGCATGACGCGGCCGCGGCGGCGCGCCTCCGCCGACATGCTCAGCCGATTCTC
CGGGCTCAACGACAACATGGTCTTCGTGCTCTGAGAAAGTCTGAAGAAGGTATATGTGGG
TGCTTTTCTTGGTTGATCTAGTCGGAAACTCAGATGGCTTTTGGCCATGGTGCTGGATTA
TTGCTGATGCTAATTCAGCTCGTGCTGTAGCTCTTCATCTCTTTCTCTTTTTGTTCGTTG
GAAGATCCAAAGGAGTTCTCTCTCTGAATTTTTCATCTTTCTGTGTACCATAAGCTAGCT
CCAGTAATCTGAGATGTACATGAACTTACTGCAAAAAAAATCTTGTGTACCATAAGCAAA
GCTCAAGTGGTCT

clustalw multiple alignements is not computed in this case