cluster # 5348

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Oryza sativa
cluster # 5348 cluster # 5348 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5348#0 length = 624 sequences # 3

consensusID : consensus_5348#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 624
fasta sequence

                              [GGAACTTCACCGAACACTGTGTTCATGGTTGGGATAACCTTCCCCGCAAACTACTGATGTACTTCGCCAACACAGCTTACTCCATGGAATCTTACTTCCAGACTGTTATTTGCAATTCTTCCAAGTTCAGAAACACAACTGTCAACGGGGACCTACGATACTTTGTGTGGGATGATCCTCCAGGGCTTGAGCCACTTGTACTTGATGAATCACATTTTGATGACATGGTAAACAGTAGTGCAGCCTTCGCAAGGCGGTTCGTGGATGATTCTCCGGTCCTGAAGAAGATTGACAAGGAGATACTAAACCGTTCTTCGGCCGTCTGTGCAAGCTTCAGCAGAAGACGGGGGATGGATGTGGACTCGTGCTCAAAATGGGGTGACGTTAATGTTCTTCAACCAGCACGTGCTGGAGAGCAGCTTAGGCGCTTCATTTCTGAGATCAGTCAGACAAGAGGATGCAGCTAGCTAAAAGCTGAATCTGGAGGTTTTCATCAAGAAGATTGACTACCTGACCAATGGTTACAAGGAACATATTTTTTTTCTGCTGATGAACTACATGTTGGAAATGGCGAAGGCTGAGTAAGCACCTGACTGAAAACCTGGAAGGTTGAGATTGCCATCA]

[+] EMBL CK085100             [GGAACTTCACCGAACACTGTGTTCATGGTTGGGATAACCTTCCCCGCAAACTACTGATGTACTTCGCCAACACAGCTTACTCCATGGAATCTTACTTCCAGACTGTTATTTGCAATTCTTCCAAGTTCAGAAACACAACTGTCAACGGGGACCTACGATACTTTGTGTGGGATGATCCTCCAGGGCTTGAGCCACTTGTACTTGATGAATCACATTTTGATGACATGGTAAACAGTAGTGCAGCCTTCGCAAGGCGGTTCGTGGATGATTCTCCGGTCCTGAAGAAGATTGACAAGGAGATACTAAACCGTTCTTCGGCCGTCTGTGCAAGCTTCAGCAGAAGACGGGGGATGGATGTGGACTCGTGCTCAAAATGGGGTGACGTTAATGTTCTTCAACCAGCACGTGCTGGAGAGCAGCTTAGGCGCTTCATTTCTGAGATCAGTCAGACAAGAGGATGCAGCTAGCTAAAAGCTGAATCTGGAGGTTTTCATCAAGAAGATTGACTACCTGACCAATGGTTACAAGGAACATATTTTTTTTCTGCTGATGAACTACAT                                                                ]
[+] EMBL CK085288             [GGAACTTCACCGAACACTGTGTTCATGGTTGGGATAACCTTCCCCGCAAACTACTGATGTACTTCGCCAACACAGCTTACTCCATGGAATCTTACTTCCAGACTGTTATTTGCAATTCTTCCAAGTTCAGAAACACAACTGTCAACGGGGACCTACGATACTTTGTGTGGGATGATCCTCCAGGGCTTGACCCACTTGTACTTGATGAATCACATTTTGATGACATGGTAAACAGTAGTGCAGCCTTCGCAAGGCGGTTCGTGGATGATTCTCCGGTCCTGAAGAAGATTGACAAGGA                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA305609             [                                                                                                                                                                                                            ATGAATCACATTTTGATGACATGGTAAACAGTAGTGCAGCCTTCGCAAGGCGGTTCGTGGATGATTCTCCGGTCCTGAAGAAGATTGACAAGGAGATACTAAACCGTTCTTCGGCCGTCTGTGCAAGCTTCAGCAGAAGACGGGGGATGGATGTGGACTCGTGCTCAAAATGGGGTGACGTTAATGTTCTTCAACCAGCACGTGCTGGAGAGCAGCTTAGGCGCTTCATTTCTGAGATCAGTCAGACAAGAGGATGCAGCTAGCTAAAAGCTGAATCTGGAGGTTTTCATCAAGAAGATTGACTAGCTGACCAATGGTTACAAGGAACATATTTTTTTTCTGCTGATGAACTACATGTTGGAAATGGCGAAGGCTGAGTAAGCACCTGACTGAAAACCTGGAAGGTTGAGATTGCCATCA]




>consensus_5348#0
GGAACTTCACCGAACACTGTGTTCATGGTTGGGATAACCTTCCCCGCAAACTACTGATGT
ACTTCGCCAACACAGCTTACTCCATGGAATCTTACTTCCAGACTGTTATTTGCAATTCTT
CCAAGTTCAGAAACACAACTGTCAACGGGGACCTACGATACTTTGTGTGGGATGATCCTC
CAGGGCTTGAGCCACTTGTACTTGATGAATCACATTTTGATGACATGGTAAACAGTAGTG
CAGCCTTCGCAAGGCGGTTCGTGGATGATTCTCCGGTCCTGAAGAAGATTGACAAGGAGA
TACTAAACCGTTCTTCGGCCGTCTGTGCAAGCTTCAGCAGAAGACGGGGGATGGATGTGG
ACTCGTGCTCAAAATGGGGTGACGTTAATGTTCTTCAACCAGCACGTGCTGGAGAGCAGC
TTAGGCGCTTCATTTCTGAGATCAGTCAGACAAGAGGATGCAGCTAGCTAAAAGCTGAAT
CTGGAGGTTTTCATCAAGAAGATTGACTACCTGACCAATGGTTACAAGGAACATATTTTT
TTTCTGCTGATGAACTACATGTTGGAAATGGCGAAGGCTGAGTAAGCACCTGACTGAAAA
CCTGGAAGGTTGAGATTGCCATCA

clustalw multiple alignements is not computed in this case