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Oryza sativa
cluster # 5553 cluster # 5553       Sequences # 3       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5553#0 length = 3053 sequences # 1  
 consensus_5553#1 length = 559 sequences # 2  
consensusID : consensus_5553#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3053
fasta sequence 
                              [TAGTACTAGTGATGAAGGCATGAAGCTACTGTAATGCCGCTTCTCTAGCAGTTTCCTGACAGCAGAAAAGCCTACCAAAAAATGATTGCTCCCACGCTCCTTACGCAAAGAGCCACTGCGAGTGCAATACTCGTGTTCCTTTTTGTCTCCGTAGCACAATCCGCCTCTTCTTTCCATCCTGCAAGCACGACGACAGTGACACGGCCCGCCGTCAGCGGGAGTTGCATTCCGAGTGGGCGGAAGGCGCTCCTGACCTTCAAGGATAGCTTTTGGGATCGTGCTGGCCGCCTTTATTCATGGCGGGGCGAAGACTGCTGCCGGTGGAAGGGAGTCCGATGCGACAACACAACTGGGCATGTCGTCAGGCTCGACCTCCGCAACACAGACGAAGACGATTGGAGCAATGGGCTGATCTTGTCAACCAGTGAGATGAGCCCTTCTATTGTTGATTTGCATCACTTGAGGTATCTTGATCTAAGCTACAATCACTTCAATTTTACAAGCATACCTGATTTTCTGGGTTCACTCAGCAACTTGAGGTATCTCAACCTCTCCGCTGCAAATTTTTGGGGAACTCTGCCTTCTCAGCTTGGTAACCTCTCGAATCTGCAATACCTTGATCTTGGCAATTCCCATAGTCTGAGTGTTTCAGATCTTTCATGGTTAATGGGTCTCCCTTTTTTAAGCTATCTTGATTTATCCACGGTGGACCTCAGTTCCGAAAGGAATTGGGTCCATGCGGTGAACAAGCTTCCTTCTCTTCAAGTCCTTGTCTTATCTAGCTGTGGGCTTAACAATACCGTCTCTACTCTATCTCATTCCAATCTCACACATCTTGAAGTCCTAGATTTAACATTAATCTGTTTAGCTCTCCTCTCGCACACAACTGGTTTTGGGATCTCACTACACTTAAAAAGCTCTTTCTATATGATTGTGCCTGGTCCGGGCCAATTCCTGATGCATTGCCCTTGAGTCCATAGTTCTGCATGGCACCGATTTATCGGGTAACATACCAACAACAATGAAAAATCTGTGTAATTTACAAGAGCTGGATTTATACGACATTAATATTAACAGTTCCATATCAGAACTGATGGAGAGATTGCCGAAGTGTTCATGGAATAAGTTGCGTAAGATGGACCTGCATTGTGCAAATTTGACAGGGGAACTACCAACTTGGATAGGACATCTAGCAAGTCTCAGTTATCTTGATCTTTCTGAGAACATGATTGTTGGCTCTGTACCTGATGGAACGGGAAATCTGACAAATCTCAACTATCTTGACCTCTCTCAGAACTCACTGGTTGGCCATATACCTGTTGGGATTGGGGCATTTGGCAACTTGACTAGCTTGAACCTTGGCCAAAATAGCTTCAGTGGTGTGCTCGCAGAATACCATTTTGCAACTCTAGAAAGACTGGAATTTTTGGACCTTTCAAGCAACTCGCTGAAATTAGATTTACATGAAGCTTGGATTCCTCCCTTTAAATTAAAGAAGGGATATTTTGAGTCATGTGACTTGGGCCCTCAGTTCCCTTCATGGCTAAGATGGCAAACTGATATAGTTGTCCTTGATATTTCAAATACAAGCATAAAGGATGACTTGCCTGGCTGGTTTTGGACTGTTTCATATAATGCTTATGAATTGTACCTGTCAAGCAATCAACTGGGTGGAGCTTTACCAGAGAAATTGGAACTGCCATCAATGCAAGCAATGGATCTCTCCGATAATTATTTGTCAGGGAAGTTACCAGCAAATCTCACTGTTCCCAATCTAATGACACTGCATCTTCACCACAATCAAATTGGAGGCACTATTCCAGCTTGTTTGTGTCAACTGCGGAGTTTGAGAGTAATAAATCTGTCATACAATCAACTAACAGGGGAAATCCCACAATGTTCAGTGGATCAATTTGGTTTCTCATTCTTGGTTATAGATATGAAGAATAACAATCTATCTGGTGAATTCCCTAGCTTCCTTCAAAATGCTGGTTGGTTATTATTTCTTGACCTTTCATATAACAAGTTGTCTGGAAATGTCCCAACATGGATTGCACAGAGAATGCCTTACCTGGAAGTTTTGATTCTAAGATCGAACATGTTTTGTGGTAACCTTTCTAACCAATTAAACAAGCTTGATCAACTTCATTTTCTCGATGTAGCACATAACAACATATCAGGAAGTATATATTCATCTATAAGAAGCTTGACAGCCATGAAATATTCACACACATCAGGGTTGGACAACTACACTGGTGCTAGCATATCCATGTCCATAAAAGACCAGGAGCTTAACTATACCTTTCAATCCACAAATAATATTATGTTGATTGACATGTCGTACAATAGTTTCACTGGACCTATTCCAAGAGAATTAACTCTACTCAAGGGGCTTCAAAGTTTGAATCTATCAGGCAATCAATTAAGTGGAACAATTCCAAATGATATTGGCATTTTAAGGAGATTGGAGTCCCTGGACCTATCCTACAATGATTTAGTTGGTGAAATCCCCTCGATTTTATCAGACCTTACTTTTTTGAGCTGCTTAAACTTGTCCTACAACAATCTATCAGGAAGAATCCCCTCAGGACAACAGCTACAAACACTTAATAATCTTTATATGTACATCGGCAATCCTGGACTTTGTGGACTTCCTCTTTCCACCAATTGTTCCACGAACAGAACAAACAAAATTGTCCAGAATGAACATGATGACGCATCACATGATACAACATATTTGTACATCAGCACAAGTGCAGGGTTTGTGGTGGGGCTCTGGATAGTGTTCTGCACCATCCTGTTCAAGAAATCATGGAGGATCGCTTATTTTCAGTTTTTTGATCAGATATATGACAAGATATATGTGCAAGCAGCTGTCAGTAAGGCTGTTTTGATAAGAAAATTCCTATGAAGAACTATGGATGTTTTATTCCACTGCATATCTTTTCATACTCTTCTTTTTTTTCTTGTGATGTGCGCATCATTTTTTTTTAACAGAGTAGTAGTTCTAAAGAGAGAGATATTGTAACCAAGAAGCTCTTTAATAATACCTG]

[+] EMBL AK072103             [TAGTACTAGTGATGAAGGCATGAAGCTACTGTAATGCCGCTTCTCTAGCAGTTTCCTGACAGCAGAAAAGCCTACCAAAAAATGATTGCTCCCACGCTCCTTACGCAAAGAGCCACTGCGAGTGCAATACTCGTGTTCCTTTTTGTCTCCGTAGCACAATCCGCCTCTTCTTTCCATCCTGCAAGCACGACGACAGTGACACGGCCCGCCGTCAGCGGGAGTTGCATTCCGAGTGGGCGGAAGGCGCTCCTGACCTTCAAGGATAGCTTTTGGGATCGTGCTGGCCGCCTTTATTCATGGCGGGGCGAAGACTGCTGCCGGTGGAAGGGAGTCCGATGCGACAACACAACTGGGCATGTCGTCAGGCTCGACCTCCGCAACACAGACGAAGACGATTGGAGCAATGGGCTGATCTTGTCAACCAGTGAGATGAGCCCTTCTATTGTTGATTTGCATCACTTGAGGTATCTTGATCTAAGCTACAATCACTTCAATTTTACAAGCATACCTGATTTTCTGGGTTCACTCAGCAACTTGAGGTATCTCAACCTCTCCGCTGCAAATTTTTGGGGAACTCTGCCTTCTCAGCTTGGTAACCTCTCGAATCTGCAATACCTTGATCTTGGCAATTCCCATAGTCTGAGTGTTTCAGATCTTTCATGGTTAATGGGTCTCCCTTTTTTAAGCTATCTTGATTTATCCACGGTGGACCTCAGTTCCGAAAGGAATTGGGTCCATGCGGTGAACAAGCTTCCTTCTCTTCAAGTCCTTGTCTTATCTAGCTGTGGGCTTAACAATACCGTCTCTACTCTATCTCATTCCAATCTCACACATCTTGAAGTCCTAGATTTAACATTAATCTGTTTAGCTCTCCTCTCGCACACAACTGGTTTTGGGATCTCACTACACTTAAAAAGCTCTTTCTATATGATTGTGCCTGGTCCGGGCCAATTCCTGATGCATTGCCCTTGAGTCCATAGTTCTGCATGGCACCGATTTATCGGGTAACATACCAACAACAATGAAAAATCTGTGTAATTTACAAGAGCTGGATTTATACGACATTAATATTAACAGTTCCATATCAGAACTGATGGAGAGATTGCCGAAGTGTTCATGGAATAAGTTGCGTAAGATGGACCTGCATTGTGCAAATTTGACAGGGGAACTACCAACTTGGATAGGACATCTAGCAAGTCTCAGTTATCTTGATCTTTCTGAGAACATGATTGTTGGCTCTGTACCTGATGGAACGGGAAATCTGACAAATCTCAACTATCTTGACCTCTCTCAGAACTCACTGGTTGGCCATATACCTGTTGGGATTGGGGCATTTGGCAACTTGACTAGCTTGAACCTTGGCCAAAATAGCTTCAGTGGTGTGCTCGCAGAATACCATTTTGCAACTCTAGAAAGACTGGAATTTTTGGACCTTTCAAGCAACTCGCTGAAATTAGATTTACATGAAGCTTGGATTCCTCCCTTTAAATTAAAGAAGGGATATTTTGAGTCATGTGACTTGGGCCCTCAGTTCCCTTCATGGCTAAGATGGCAAACTGATATAGTTGTCCTTGATATTTCAAATACAAGCATAAAGGATGACTTGCCTGGCTGGTTTTGGACTGTTTCATATAATGCTTATGAATTGTACCTGTCAAGCAATCAACTGGGTGGAGCTTTACCAGAGAAATTGGAACTGCCATCAATGCAAGCAATGGATCTCTCCGATAATTATTTGTCAGGGAAGTTACCAGCAAATCTCACTGTTCCCAATCTAATGACACTGCATCTTCACCACAATCAAATTGGAGGCACTATTCCAGCTTGTTTGTGTCAACTGCGGAGTTTGAGAGTAATAAATCTGTCATACAATCAACTAACAGGGGAAATCCCACAATGTTCAGTGGATCAATTTGGTTTCTCATTCTTGGTTATAGATATGAAGAATAACAATCTATCTGGTGAATTCCCTAGCTTCCTTCAAAATGCTGGTTGGTTATTATTTCTTGACCTTTCATATAACAAGTTGTCTGGAAATGTCCCAACATGGATTGCACAGAGAATGCCTTACCTGGAAGTTTTGATTCTAAGATCGAACATGTTTTGTGGTAACCTTTCTAACCAATTAAACAAGCTTGATCAACTTCATTTTCTCGATGTAGCACATAACAACATATCAGGAAGTATATATTCATCTATAAGAAGCTTGACAGCCATGAAATATTCACACACATCAGGGTTGGACAACTACACTGGTGCTAGCATATCCATGTCCATAAAAGACCAGGAGCTTAACTATACCTTTCAATCCACAAATAATATTATGTTGATTGACATGTCGTACAATAGTTTCACTGGACCTATTCCAAGAGAATTAACTCTACTCAAGGGGCTTCAAAGTTTGAATCTATCAGGCAATCAATTAAGTGGAACAATTCCAAATGATATTGGCATTTTAAGGAGATTGGAGTCCCTGGACCTATCCTACAATGATTTAGTTGGTGAAATCCCCTCGATTTTATCAGACCTTACTTTTTTGAGCTGCTTAAACTTGTCCTACAACAATCTATCAGGAAGAATCCCCTCAGGACAACAGCTACAAACACTTAATAATCTTTATATGTACATCGGCAATCCTGGACTTTGTGGACTTCCTCTTTCCACCAATTGTTCCACGAACAGAACAAACAAAATTGTCCAGAATGAACATGATGACGCATCACATGATACAACATATTTGTACATCAGCACAAGTGCAGGGTTTGTGGTGGGGCTCTGGATAGTGTTCTGCACCATCCTGTTCAAGAAATCATGGAGGATCGCTTATTTTCAGTTTTTTGATCAGATATATGACAAGATATATGTGCAAGCAGCTGTCAGTAAGGCTGTTTTGATAAGAAAATTCCTATGAAGAACTATGGATGTTTTATTCCACTGCATATCTTTTCATACTCTTCTTTTTTTTCTTGTGATGTGCGCATCATTTTTTTTTAACAGAGTAGTAGTTCTAAAGAGAGAGATATTGTAACCAAGAAGCTCTTTAATAATACCTG]




>consensus_5553#0
TAGTACTAGTGATGAAGGCATGAAGCTACTGTAATGCCGCTTCTCTAGCAGTTTCCTGAC
AGCAGAAAAGCCTACCAAAAAATGATTGCTCCCACGCTCCTTACGCAAAGAGCCACTGCG
AGTGCAATACTCGTGTTCCTTTTTGTCTCCGTAGCACAATCCGCCTCTTCTTTCCATCCT
GCAAGCACGACGACAGTGACACGGCCCGCCGTCAGCGGGAGTTGCATTCCGAGTGGGCGG
AAGGCGCTCCTGACCTTCAAGGATAGCTTTTGGGATCGTGCTGGCCGCCTTTATTCATGG
CGGGGCGAAGACTGCTGCCGGTGGAAGGGAGTCCGATGCGACAACACAACTGGGCATGTC
GTCAGGCTCGACCTCCGCAACACAGACGAAGACGATTGGAGCAATGGGCTGATCTTGTCA
ACCAGTGAGATGAGCCCTTCTATTGTTGATTTGCATCACTTGAGGTATCTTGATCTAAGC
TACAATCACTTCAATTTTACAAGCATACCTGATTTTCTGGGTTCACTCAGCAACTTGAGG
TATCTCAACCTCTCCGCTGCAAATTTTTGGGGAACTCTGCCTTCTCAGCTTGGTAACCTC
TCGAATCTGCAATACCTTGATCTTGGCAATTCCCATAGTCTGAGTGTTTCAGATCTTTCA
TGGTTAATGGGTCTCCCTTTTTTAAGCTATCTTGATTTATCCACGGTGGACCTCAGTTCC
GAAAGGAATTGGGTCCATGCGGTGAACAAGCTTCCTTCTCTTCAAGTCCTTGTCTTATCT
AGCTGTGGGCTTAACAATACCGTCTCTACTCTATCTCATTCCAATCTCACACATCTTGAA
GTCCTAGATTTAACATTAATCTGTTTAGCTCTCCTCTCGCACACAACTGGTTTTGGGATC
TCACTACACTTAAAAAGCTCTTTCTATATGATTGTGCCTGGTCCGGGCCAATTCCTGATG
CATTGCCCTTGAGTCCATAGTTCTGCATGGCACCGATTTATCGGGTAACATACCAACAAC
AATGAAAAATCTGTGTAATTTACAAGAGCTGGATTTATACGACATTAATATTAACAGTTC
CATATCAGAACTGATGGAGAGATTGCCGAAGTGTTCATGGAATAAGTTGCGTAAGATGGA
CCTGCATTGTGCAAATTTGACAGGGGAACTACCAACTTGGATAGGACATCTAGCAAGTCT
CAGTTATCTTGATCTTTCTGAGAACATGATTGTTGGCTCTGTACCTGATGGAACGGGAAA
TCTGACAAATCTCAACTATCTTGACCTCTCTCAGAACTCACTGGTTGGCCATATACCTGT
TGGGATTGGGGCATTTGGCAACTTGACTAGCTTGAACCTTGGCCAAAATAGCTTCAGTGG
TGTGCTCGCAGAATACCATTTTGCAACTCTAGAAAGACTGGAATTTTTGGACCTTTCAAG
CAACTCGCTGAAATTAGATTTACATGAAGCTTGGATTCCTCCCTTTAAATTAAAGAAGGG
ATATTTTGAGTCATGTGACTTGGGCCCTCAGTTCCCTTCATGGCTAAGATGGCAAACTGA
TATAGTTGTCCTTGATATTTCAAATACAAGCATAAAGGATGACTTGCCTGGCTGGTTTTG
GACTGTTTCATATAATGCTTATGAATTGTACCTGTCAAGCAATCAACTGGGTGGAGCTTT
ACCAGAGAAATTGGAACTGCCATCAATGCAAGCAATGGATCTCTCCGATAATTATTTGTC
AGGGAAGTTACCAGCAAATCTCACTGTTCCCAATCTAATGACACTGCATCTTCACCACAA
TCAAATTGGAGGCACTATTCCAGCTTGTTTGTGTCAACTGCGGAGTTTGAGAGTAATAAA
TCTGTCATACAATCAACTAACAGGGGAAATCCCACAATGTTCAGTGGATCAATTTGGTTT
CTCATTCTTGGTTATAGATATGAAGAATAACAATCTATCTGGTGAATTCCCTAGCTTCCT
TCAAAATGCTGGTTGGTTATTATTTCTTGACCTTTCATATAACAAGTTGTCTGGAAATGT
CCCAACATGGATTGCACAGAGAATGCCTTACCTGGAAGTTTTGATTCTAAGATCGAACAT
GTTTTGTGGTAACCTTTCTAACCAATTAAACAAGCTTGATCAACTTCATTTTCTCGATGT
AGCACATAACAACATATCAGGAAGTATATATTCATCTATAAGAAGCTTGACAGCCATGAA
ATATTCACACACATCAGGGTTGGACAACTACACTGGTGCTAGCATATCCATGTCCATAAA
AGACCAGGAGCTTAACTATACCTTTCAATCCACAAATAATATTATGTTGATTGACATGTC
GTACAATAGTTTCACTGGACCTATTCCAAGAGAATTAACTCTACTCAAGGGGCTTCAAAG
TTTGAATCTATCAGGCAATCAATTAAGTGGAACAATTCCAAATGATATTGGCATTTTAAG
GAGATTGGAGTCCCTGGACCTATCCTACAATGATTTAGTTGGTGAAATCCCCTCGATTTT
ATCAGACCTTACTTTTTTGAGCTGCTTAAACTTGTCCTACAACAATCTATCAGGAAGAAT
CCCCTCAGGACAACAGCTACAAACACTTAATAATCTTTATATGTACATCGGCAATCCTGG
ACTTTGTGGACTTCCTCTTTCCACCAATTGTTCCACGAACAGAACAAACAAAATTGTCCA
GAATGAACATGATGACGCATCACATGATACAACATATTTGTACATCAGCACAAGTGCAGG
GTTTGTGGTGGGGCTCTGGATAGTGTTCTGCACCATCCTGTTCAAGAAATCATGGAGGAT
CGCTTATTTTCAGTTTTTTGATCAGATATATGACAAGATATATGTGCAAGCAGCTGTCAG
TAAGGCTGTTTTGATAAGAAAATTCCTATGAAGAACTATGGATGTTTTATTCCACTGCAT
ATCTTTTCATACTCTTCTTTTTTTTCTTGTGATGTGCGCATCATTTTTTTTTAACAGAGT
AGTAGTTCTAAAGAGAGAGATATTGTAACCAAGAAGCTCTTTAATAATACCTG

consensusID : consensus_5553#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 559
fasta sequence 
                              [TTTTTTTTTTTATACGCAAAACTTGG-AGTAACCAAATCGATTCACAGGCCACACATACAGGTAGTATACAGATTCGTCTATAAGAAGCTTGACAGCCATGAAATATTCACACACATCAGGGTGGGACAACTACACGGGGTGCTAGCATATCCAGTGGTCCATAAAAGACCAGGAGCTTAACTATACCTTTCAATCCACAAATAATAT-TATGTTGATTGACATGTCGTACAATAGTTTCACTGGACCTATTCCAAGAGAATTAACTCTACTCAAGGGGCTTCAAAGTTTTGAATCTATCAGGCAATCAATTAAGTGGAACAATTCCAAATGATATGTGGCATTTTAAGGAGATGTGGAGTCCC-TGGACCTATCCTACAATGATTTAGTTGGTGAAATCCCCTCGAGTTTATCAGACCTTACTTTTTTGAGCTGGTTAAACTTGTCCTACAACAATCTATCAGGAAGAATCCCCTCAGGGACAACAATAACAAACACTTTAATAAATCTTTATCATGTCCTCGGGAATCCCTGGGACTTTGGGGGTTCCCTCTTTTTCCCC]

[-] EMBL BM038451             [TTTTTTTTTTTATACGCAAAACTTGG AGTAACCAAATCGATTCACAGGCCACACATACAGGTAGTATACAGATTCGTCTATAAGAAGCTTGACAGCCATGAAATATTCACACACATCAGGGTGGGACAACTACACGGGGTGCTAGCATATCCAGTGGTCCATAAAAGACCAGGAGCTTAACTATACCTTTCAATCCACAAATAATAT TATGTTGATTGACATGTCGTACAATAGTTTCACTGGACCTATTCCAAGAGAATTAACTCTACTCAAGGGGCTTCAAAGTTTTGAATCTATCAGGCAATCAATTAAGTGGAACAATTCCAAATGATATGTGGCATTTTAAGGAGATGTGGAGTCCC TGGACCTATCCTACAATGATTTAGTTGGTGAAATCCCCTCGAGTTTATCAGACCTTACTTTTTTGAGCTGGTTAAACTTGTCCTACAACAATCTATCAGGAAGAATCCCCTCAGGGACAACAATAACAAACACTTTAATAAATCTTTATCATGTCCTCGGGAATCCCTGGGACTTTGGGGGTTCCCTCTTTTTCCCC]
[-] EMBL BM421829             [ TTTTTTTTTTATACGCAAAACTTGGCAGTAACCAAATCGATTCACAGGCCACACATACAGGTAGTATACAGATTCGTCTATAAGAAGCTTGACAGCCATGAAATATTCACACACATCAGGGTGGGACAACTACAC GGGTGCTAGCATATCCAGT GTCCATAAAAGACCAGGAGCTTAACTATACCTTTCAATCCACAAATAATATATATGTTGATGGACATGTCGTACAATAGTTTCACTGGACCTATTCCAAGAGAATTAACTCTACTCAAGGGGCTTCAAAG TTGGAATCTATCAGGCAATCAATTAAGTGGAACAATTCCAAATGATATGGGCCATTTTAAGGAGATG GGAGTCCCGTGGACCTATCCTACAAGGATTTAGTGGGTGAAATCCCCTCGAGTTTATCAGACCTTACTTTTTGGAGCTGCTTAAAC TGTCCTACAACAATCTATCAGGAAGAATCCCCTCA GGACAACAACTACAAACACTTaa                                                            ]




>consensus_5553#1
TTTTTTTTTTTATACGCAAAACTTGGAGTAACCAAATCGATTCACAGGCCACACATACAG
GTAGTATACAGATTCGTCTATAAGAAGCTTGACAGCCATGAAATATTCACACACATCAGG
GTGGGACAACTACACGGGGTGCTAGCATATCCAGTGGTCCATAAAAGACCAGGAGCTTAA
CTATACCTTTCAATCCACAAATAATATTATGTTGATTGACATGTCGTACAATAGTTTCAC
TGGACCTATTCCAAGAGAATTAACTCTACTCAAGGGGCTTCAAAGTTTTGAATCTATCAG
GCAATCAATTAAGTGGAACAATTCCAAATGATATGTGGCATTTTAAGGAGATGTGGAGTC
CCTGGACCTATCCTACAATGATTTAGTTGGTGAAATCCCCTCGAGTTTATCAGACCTTAC
TTTTTTGAGCTGGTTAAACTTGTCCTACAACAATCTATCAGGAAGAATCCCCTCAGGGAC
AACAATAACAAACACTTTAATAAATCTTTATCATGTCCTCGGGAATCCCTGGGACTTTGG
GGGTTCCCTCTTTTTCCCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_5553#0      TAGTACTAGTGATGAAGGCATGAAGCTACTGTAATGCCGCTTCTCTAGCAGTTTCCTGAC 60
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      AGCAGAAAAGCCTACCAAAAAATGATTGCTCCCACGCTCCTTACGCAAAGAGCCACTGCG 120
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      AGTGCAATACTCGTGTTCCTTTTTGTCTCCGTAGCACAATCCGCCTCTTCTTTCCATCCT 180
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      GCAAGCACGACGACAGTGACACGGCCCGCCGTCAGCGGGAGTTGCATTCCGAGTGGGCGG 240
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      AAGGCGCTCCTGACCTTCAAGGATAGCTTTTGGGATCGTGCTGGCCGCCTTTATTCATGG 300
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      CGGGGCGAAGACTGCTGCCGGTGGAAGGGAGTCCGATGCGACAACACAACTGGGCATGTC 360
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      GTCAGGCTCGACCTCCGCAACACAGACGAAGACGATTGGAGCAATGGGCTGATCTTGTCA 420
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      ACCAGTGAGATGAGCCCTTCTATTGTTGATTTGCATCACTTGAGGTATCTTGATCTAAGC 480
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      TACAATCACTTCAATTTTACAAGCATACCTGATTTTCTGGGTTCACTCAGCAACTTGAGG 540
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      TATCTCAACCTCTCCGCTGCAAATTTTTGGGGAACTCTGCCTTCTCAGCTTGGTAACCTC 600
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      TCGAATCTGCAATACCTTGATCTTGGCAATTCCCATAGTCTGAGTGTTTCAGATCTTTCA 660
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      TGGTTAATGGGTCTCCCTTTTTTAAGCTATCTTGATTTATCCACGGTGGACCTCAGTTCC 720
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      GAAAGGAATTGGGTCCATGCGGTGAACAAGCTTCCTTCTCTTCAAGTCCTTGTCTTATCT 780
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      AGCTGTGGGCTTAACAATACCGTCTCTACTCTATCTCATTCCAATCTCACACATCTTGAA 840
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      GTCCTAGATTTAACATTAATCTGTTTAGCTCTCCTCTCGCACACAACTGGTTTTGGGATC 900
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      TCACTACACTTAAAAAGCTCTTTCTATATGATTGTGCCTGGTCCGGGCCAATTCCTGATG 960
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      CATTGCCCTTGAGTCCATAGTTCTGCATGGCACCGATTTATCGGGTAACATACCAACAAC 1020
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      AATGAAAAATCTGTGTAATTTACAAGAGCTGGATTTATACGACATTAATATTAACAGTTC 1080
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      CATATCAGAACTGATGGAGAGATTGCCGAAGTGTTCATGGAATAAGTTGCGTAAGATGGA 1140
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      CCTGCATTGTGCAAATTTGACAGGGGAACTACCAACTTGGATAGGACATCTAGCAAGTCT 1200
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      CAGTTATCTTGATCTTTCTGAGAACATGATTGTTGGCTCTGTACCTGATGGAACGGGAAA 1260
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      TCTGACAAATCTCAACTATCTTGACCTCTCTCAGAACTCACTGGTTGGCCATATACCTGT 1320
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      TGGGATTGGGGCATTTGGCAACTTGACTAGCTTGAACCTTGGCCAAAATAGCTTCAGTGG 1380
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      TGTGCTCGCAGAATACCATTTTGCAACTCTAGAAAGACTGGAATTTTTGGACCTTTCAAG 1440
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      CAACTCGCTGAAATTAGATTTACATGAAGCTTGGATTCCTCCCTTTAAATTAAAGAAGGG 1500
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      ATATTTTGAGTCATGTGACTTGGGCCCTCAGTTCCCTTCATGGCTAAGATGGCAAACTGA 1560
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      TATAGTTGTCCTTGATATTTCAAATACAAGCATAAAGGATGACTTGCCTGGCTGGTTTTG 1620
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      GACTGTTTCATATAATGCTTATGAATTGTACCTGTCAAGCAATCAACTGGGTGGAGCTTT 1680
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      ACCAGAGAAATTGGAACTGCCATCAATGCAAGCAATGGATCTCTCCGATAATTATTTGTC 1740
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      AGGGAAGTTACCAGCAAATCTCACTGTTCCCAATCTAATGACACTGCATCTTCACCACAA 1800
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      TCAAATTGGAGGCACTATTCCAGCTTGTTTGTGTCAACTGCGGAGTTTGAGAGTAATAAA 1860
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      TCTGTCATACAATCAACTAACAGGGGAAATCCCACAATGTTCAGTGGATCAATTTGGTTT 1920
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      CTCATTCTTGGTTATAGATATGAAGAATAACAATCTATCTGGTGAATTCCCTAGCTTCCT 1980
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      TCAAAATGCTGGTTGGTTATTATTTCTTGACCTTTCATATAACAAGTTGTCTGGAAATGT 2040
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      CCCAACATGGATTGCACAGAGAATGCCTTACCTGGAAGTTTTGATTCTAAGATCGAACAT 2100
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      GTTTTGTGGTAACCTTTCTAACCAATTAAACAAGCTTGATCAACTTCATTTTCTCGATGT 2160
consensus_5553#1      ------------TTTTTTTTTTTATACGCAAAACTTGGAGTAACCAAAT-----CGAT-T 42
                                    *** *    *     * **  * **  ***   **     **** *

consensus_5553#0      AGCACATAACAACATATCAGGAAGTATATA--TTCATCTATAAGAAGCTTGACAGCCATG 2218
consensus_5553#1      CACAGGCCACA-CATA-CAGGTAGTATACAGATTCGTCTATAAGAAGCTTGACAGCCATG 100
                        **    *** **** **** ****** *  *** ************************

consensus_5553#0      AAATATTCACACACATCAGGGTTGGACAACTACACTGG-TGCTAGCATATCCAT--GTCC 2275
consensus_5553#1      AAATATTCACACACATCAGGGTGGGACAACTACACGGGGTGCTAGCATATCCAGTGGTCC 160
                      ********************** ************ ** **************   ****

consensus_5553#0      ATAAAAGACCAGGAGCTTAACTATACCTTTCAATCCACAAATAATATTATGTTGATTGAC 2335
consensus_5553#1      ATAAAAGACCAGGAGCTTAACTATACCTTTCAATCCACAAATAATATTATGTTGATTGAC 220
                      ************************************************************

consensus_5553#0      ATGTCGTACAATAGTTTCACTGGACCTATTCCAAGAGAATTAACTCTACTCAAGGGGCTT 2395
consensus_5553#1      ATGTCGTACAATAGTTTCACTGGACCTATTCCAAGAGAATTAACTCTACTCAAGGGGCTT 280
                      ************************************************************

consensus_5553#0      CAAAGTTT-GAATCTATCAGGCAATCAATTAAGTGGAACAATTCCAAATGATAT-TGGCA 2453
consensus_5553#1      CAAAGTTTTGAATCTATCAGGCAATCAATTAAGTGGAACAATTCCAAATGATATGTGGCA 340
                      ******** ********************************************* *****

consensus_5553#0      TTTTAAGGAGAT-TGGAGTCCCTGGACCTATCCTACAATGATTTAGTTGGTGAAATCCCC 2512
consensus_5553#1      TTTTAAGGAGATGTGGAGTCCCTGGACCTATCCTACAATGATTTAGTTGGTGAAATCCCC 400
                      ************ ***********************************************

consensus_5553#0      TCGATTTTATCAGACCTTACTTTTTTGAGCTGCTTAAACTTGTCCTACAACAATCTATCA 2572
consensus_5553#1      TCGAGTTTATCAGACCTTACTTTTTTGAGCTGGTTAAACTTGTCCTACAACAATCTATCA 460
                      **** *************************** ***************************

consensus_5553#0      GGAAGAATCCCCTCAGG-ACAACAGCTACAAACACTT-AATAA-TCTTTAT-ATGTACAT 2628
consensus_5553#1      GGAAGAATCCCCTCAGGGACAACAATAACAAACACTTTAATAAATCTTTATCATGTCC-T 519
                      ***************** ******   ********** ***** ******* **** * *

consensus_5553#0      CGGCAATCCT--GGACTTTGTGGACTTCCTCTTTCCACCAATTGTTCCACGAACAGAACA 2686
consensus_5553#1      CGGGAATCCCTGGGACTTTGGGGGTTCCCTCTTTTTCCCC-------------------- 559
                      *** *****   ******** **  * *******   **                     

consensus_5553#0      AACAAAATTGTCCAGAATGAACATGATGACGCATCACATGATACAACATATTTGTACATC 2746
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      AGCACAAGTGCAGGGTTTGTGGTGGGGCTCTGGATAGTGTTCTGCACCATCCTGTTCAAG 2806
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      AAATCATGGAGGATCGCTTATTTTCAGTTTTTTGATCAGATATATGACAAGATATATGTG 2866
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      CAAGCAGCTGTCAGTAAGGCTGTTTTGATAAGAAAATTCCTATGAAGAACTATGGATGTT 2926
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      TTATTCCACTGCATATCTTTTCATACTCTTCTTTTTTTTCTTGTGATGTGCGCATCATTT 2986
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      TTTTTTAACAGAGTAGTAGTTCTAAAGAGAGAGATATTGTAACCAAGAAGCTCTTTAATA 3046
consensus_5553#1      ------------------------------------------------------------
                                                                                  

consensus_5553#0      ATACCTG 3053
consensus_5553#1      -------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)