|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_5775#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1593 fasta sequence
[CATCGCCTCGCCCGCGGATTCTCCTCCTCCTCCTCCTCCTCCTCCTTCCTCGCCGCCGGCGACGCGCCGCCGGCTACCTTTTGACGCTCCGACCGTGGTGCCCTTTTTCTGTGGGACCCGGGATCCTAGCTCCCCTCCTCCCCCGACGATTCCCGGTCGCCTCGGCGGCTCTCCTCCCGTCCTAGGGTTCCGGCGAGGTCCCCCGCGGCTGCGCCGGCGAGATGGGTGAGCGCAAGGTGCTGAACAAGTACTACCCTCCGGACTTCGACCCGTCGAAGATCCCGCGGCGGCGGCAGCCCAAGAACCAGCAGATCAAGGTGCGCATGATGCTCCCCATGAGCATCCGCTGCGGCACCTGCGGCACCTACATCTACAAGGGCACCAAGTTCAACTCGCGCAAGGAGGACGTCGAAGGCGAGAAATACCTGGGGATACAAATATTTAGGTTTTACTTCAAGTGTACGAAATGTTCAGCTGAGATAACTTTCAAAACGGACCCTCAGAATTCTGATTACACGGTGGAATCTGGGGCTAGTCGCAATTTTGAACCTTGGCGTGAAGAAGATGAGGTAGCAGACAGAGAAAAGAGGAAACGAGATGAAGAGGAGATGGGTGATGCAATGAGAGCATTGGAGAATAGAGCAATGGATTCAAAGCAGGACATGGATATACTTGCTGCTTTAGAAGAGATGCGATCCATGAAGTCTAGACATGCTGGAGTCACAGTTGACCAGATGCTTGAAATTTTGAAGCGCTCTGCTCATGATAAGGAGGAGAAAACAGTAGCTGAGCTAGATGAAGAAGATGAAAAACTTATCAAATCAATCACTTTTCGAAACTCCCAAGATTATGTAAAACGGATAGAGGATGATGATGACGATGATGAAGATTTGGTGATACCGGGCCAGTCGAGTAGCACATCAAAGATGAATGGATCCTCCCAGTCAGTATCAAATGCAACAGATGTCCTGACCAAGACTAGTGGATCTGATAATGCCAATAAAGAAGGAAATAAGATCTGGCCATCTAAGATGCCAAAATTTATAGTCAAGCCAAAGTCTACCCCTACAGATCCTATCAAGAAACAGAAGACGGAAACCACGGCTGGCCCGGATACTGGCAAAGCGCCAGTCGCAGAAGAAAATAGTGAGCCTGCGCAGAACAATGTCCTCCAATCCCTCTGCCAAAACTACGATAGCGATGAAAGTGAGTGATGACTGCGTGGCTGCTTCGTGCCGTAAGCCCGTAACAACCGTAACCGCGAATCGCCACCAACTGCTGTGGCATTGGTTGCAGCGGATGACAATTCCACTCACAGAAGAAGAATATTACGTTGTGCTAACATTGGATAACCAGATCCCTGAGGATCTATTGTTGCCACAAATCTGAATCCCGGGAATTCATTGGTTAAGTATATACAGTACTTCAAAATCTGTGGCTGCTAACATTGTCCAGGCGAGATTTATACGTGTGTGGTTTGTTGCTGAATGCCTGAAGAGATCAAAAGTCTTGTAAAATTGACAGGGAAGATGTTTGTTGACGTTGGGTTCTTGCACCAATCCTTCATTTCTACGCCTAGCTTATACACAACAC]
[+] EMBL AK066951 [CATCGCCTCGCCCGCGGATTCTCCTCCTCCTCCTCCTCCTCCTCCTTCCTCGCCGCCGGCGACGCGCCGCCGGCTACCTTTTGACGCTCCGACCGTGGTGCCCTTTTTCTGTGGGACCCGGGATCCTAGCTCCCCTCCTCCCCCGACGATTCCCGGTCGCCTCGGCGGCTCTCCTCCCGTCCTAGGGTTCCGGCGAGGTCCCCCGCGGCTGCGCCGGCGAGATGGGTGAGCGCAAGGTGCTGAACAAGTACTACCCTCCGGACTTCGACCCGTCGAAGATCCCGCGGCGGCGGCAGCCCAAGAACCAGCAGATCAAGGTGCGCATGATGCTCCCCATGAGCATCCGCTGCGGCACCTGCGGCACCTACATCTACAAGGGCACCAAGTTCAACTCGCGCAAGGAGGACGTCGAAGGCGAGAAATACCTGGGGATACAAATATTTAGGTTTTACTTCAAGTGTACGAAATGTTCAGCTGAGATAACTTTCAAAACGGACCCTCAGAATTCTGATTACACGGTGGAATCTGGGGCTAGTCGCAATTTTGAACCTTGGCGTGAAGAAGATGAGGTAGCAGACAGAGAAAAGAGGAAACGAGATGAAGAGGAGATGGGTGATGCAATGAGAGCATTGGAGAATAGAGCAATGGATTCAAAGCAGGACATGGATATACTTGCTGCTTTAGAAGAGATGCGATCCATGAAGTCTAGACATGCTGGAGTCACAGTTGACCAGATGCTTGAAATTTTGAAGCGCTCTGCTCATGATAAGGAGGAGAAAACAGTAGCTGAGCTAGATGAAGAAGATGAAAAACTTATCAAATCAATCACTTTTCGAAACTCCCAAGATTATGTAAAACGGATAGAGGATGATGATGACGATTATGAAGATTTGGTGATACCGGGCCAGTCGAGTAGCACATCAAAGATGAATGGATCCTCCCAGTCAGTATCAAATGCAACAGATGTCCTGACCAAGACTAGTGGATCTGATAATGCCAATAAAGAAGGAAATAAGATCTGGCCATCTAAGATGCCAAAATTTATAGTCAAGCCAAAGTCTACCCCTACAGATCCTATCAAGAAACAGAAGACGGAAACCACGGCTGGCCCGGATACTGGCAAAGCGCCAGTCGCAGAAGAAAATAGTGAGCCTGCGCAGAACAATGTCCTCCAATCCCTCTGCCAAAACTACGATAGCGATGAAAGTGAGTGATGACTGCGTGGCTGCTTCGTGCCGTAAGCCCGTAACAACCGTAACCGCGAATCGCCACCAACTGCTGTGGCATTGGTTGCAGCGGATGACAATTCCACTCACAGAAGAAGAATATTACGTTGTGCTAACATTGGATAACCAGATCCCTGAGGATCTATTGTTGCCACAAATCTGAATCCCGGGAATTCATTGGTTAAGTATATACAGTACTTCAAAATCTGTGGCTGCTAACATTGTCCAGGCGAGATTTATACGTGTGTGGTTTGTTGCTGAATGCCTGAAGAGATCAAAAGTCTTGTAAAATTGACAGGGAAGATGTTTGTTGACGTTGGGTTCTTGCACCAATCCTTCATTTCTACGCCTAGCTTATACACAACAC]
[+] EMBL AK071911 [ GCCCGCGGATTCTCCTCCTCCTCCTCCTCCTCCTCCTTCCTCGCCGCCGGCGACGCGCCGCCGGCTACCTTTTGACGCTCCGACCGTGGTGCCCTTTTTCTGTGGGACCCGGGATCCTAGCTCCCCTCCTCCCCCGACGATTCCCGGTCGCCTCGGCGGCTCTCCTCCCGTCCTAGGGTTCCGGCGAGGTCCCCCGCGGCTGCGCCGGCGAGATGGGTGAGCGCAAGGTGCTGAACAAGTACTACCCTCCGGACTTCGACCCGTCGAAGATCCCGCGGCGGCGGCAGCCCAAGAACCAGCAGATCAAGGTGCGCATGATGCTCCCCATGAGCATCCGCTGCGGCACCTGCGGCACCTACATCTACAAGGGCACCAAGTTCAACTCGCGCAAGGAGGACGTCGAAGGCGAGAAATACCTGGGGATACAAATATTTAGGTTTTACTTCAAGTGTACGAAATGTTCAGCTGAGATAACTTTCAAAACGGACCCTCAGAATTCTGATTACACGGTGGAATCTGGGGCTAGTCGCAATTTTGAACCTTGGCGTGAAGAAGATGAGGTAGCAGACAGAGAAAAGAGGAAACGAGATGAAGAGGAGATGGGTGATGCAATGAGAGCATTGGAGAATAGAGCAATGGATTCAAAGCAGGACATGGATATACTTGCTGCTTTAGAAGAGATGCGATCCATGAAGTCTAGACATGCTGGAGTCACAGTTGACCAGATGCTTGAAATTTTGAAGCGCTCTGCTCATGATAAGGAGGAGAAAACAGTAGCTGAGCTAGATGAAGAAGATGAAAAACTTATCAAATCAATCACTTTTCGAAACTCCCAAGATTATGTAAAACGGATAGAGGATGATGATGACGATGATGAAGATTTGGTGATACCGGGCCAGTCGAGTAGCACATCAAAGATGAATGGATCCTCCCAGTCAGTATCAAATGCAACAGATGTCCTGACCAAGACTAGTGGATCTGATAATGCCAATAAAGAAGGAAATAAGATCTGGCCATCTAAGATGCCAAAATTTATAGTCAAGCCAAAGTCTACCCCTACAGATCCTATCAAGAAACAGAAGACGGAAACCACGGCTGGCCCGGATACTGGCAAAGCGCCAGTCGCAGAAGAAAATAGTGAGCCTGCGCAGAACAATGTCCTCCAATCCCTCTGCCAAAACTACGATAGCGATGAAAGTGAGTGATGACTGCGTGGCTGCTTCGTGCCGTAAGCCCGTAACAACCGTAACCGCGAATCGCCACCAACTGCTGTGGCATTGGTTGCAGCGGATGACAATTCCACTCACAGAAGAAGAATATTACGTTGTGCTAACATTGGATAACCAGATCCCTGAGGATCTATTGTTGCCACAAATCTGAATCCCGGGAATTCATTGGTTAAGTATATACAGTACTTCAAAATC ]
[-] EMBL CA762039 [ ATAAGGAGGAGAAAACAGTAGCTGAGCTAGATGAAGAAGATGAAAAACTTATCAAATCAATCACTTTTCGAAACTCCCAAGATTATGTAAAACGGATAGAGGATGATGATGACGATGATGAAGATTTGGTGATACTGGGCCAGTTGAGTAGCACATCAAAGATGAATGGATCCTCCCAGTCAGTATCAAATGCAACAGATGTCCTGACCAAGACTAGTGGATCTGATAATGCCAATAAAGAAGGAAATAAGATCTGGCCATCTAAGATGCCAAAATTTATAGTCAAGCCAAAGTCTACCCCTACAGATCCTATCAAGAAACAGAAGACGGAAACCCCGGCTGCCCCGAATAATGGCAAAGCGCCAGTCGCAGAAGAAAAAAGTGAGCCTGGGCAGAACAATGTCCTCCAATCCCTCTGCCAAAACTACGATAGCGATGAAAGTGAGTGATGACTGCGTGGCTGCTTCGTGCCGTAAGCCCGTAACAACCGTAACCGCGAATCGCCACCAACTGCTGTGGCATTGGTTGCAGCGGATGACAATTCCACTCACAGAAGAAGAATATTACGTTGTACTAACATTGGATAACCAGATCCCTGAGGATCTATTGTTGCCACAAATCTGAATCCCGGGAATTCATTGGTTAAGTATATACAGTTCTTCAAAAaaaaaaaaa ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||