Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 5788 cluster # 5788       Sequences # 3       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5788#0 length = 389 sequences # 3  
consensusID : consensus_5788#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 389
fasta sequence 
                              [CCGACTCCCACGCCTCTCTCTGCTGCTCTCCCTTGCCCCCGAATGGCGATACTGCCGCCGGCTGCGGCTGCGGCTGCGGCGGAGGACGTCCTCTCGCTGTACGACGCGTGCTGGTTCCGCCGCCTCGTGCTCCTCTCGCCCTCTTCTCCTGCTGCTGTTGCTGCGGACGTCGCGCCTGCCTCTCCGCCGGTGGCGTCGCAGCGGGAGGAGGAGGN-GTAGTCGGAGGAGGAGGAGGAGAGGGAGGTGAAGAGATCTCCGCCGGGGACGCTGCGGCACCGGCGGACGCGGAGCGACGAGGCGGCGACGGCGGCGTTGGACGGCCTCGAGCCGCTCAGGATCCCGAACGGCCACCGGGCCAGGCTCGAGACGATCCTGTCCGGGAAGGACGG]

[+] EMBL AU070764             [CCGACTCCCACGCCTCTCTCTGCTGCTCTCCCTTGCCCCCGAATGGCGATACTGCCGCCGGCTGCGGCTGCGGCTGCGGCGGAGGACGTCCTCTCGCTGTACGACGCGTGCTGGTTCCGCCGCCTCGTGCTCCTCTCGCCCTCTTCTCCTGCTGCTGTTGCTGCGGACGTCGCGCCTGCCTCTCCGCCGGTGGCGTCGCAGCGGGAGGAGGAGGN NTCCTCNGTGGAGGAGGAGGAGAGGGAGGTGAAGAGATCTCCGCCGGGGACGCTGCGGCACCGGCGGACGCGGAGCGACGAGGCGGCGACGGCGGCGTTGGACGGCCTCGAGCCGCTCAGGATCCCGAACGGCCACCGGGCCAGGCTCGAGACGATCCTGTCCGGGAAGGACGG]
[+] EMBL AU095571             [CCGACTCCCACGCCTCTCTCTGCTGCTCTCCCTTGCCCCCGAATGGCGATACTGCCGCCGGCTGCGGCTGCGGCTGCGGCGGAGGACGTCCTCTCGCTGTACGACGCGTGCTGGTTCCGCCGCCTCGTGCTCCTCTCGCCCTCTTCTCCTGCTGCTGTTGCTGCGGACGTCGCGCCTGCCTCTCCGCCGGTGGCGTCGCAGCGGGAGGAGGAGGA GGAGGAGGAGGAGGAGGAGGAGAGGGAGGTGAAGAGATCNCCGCCGGGGACGCTGCGGCACCGGCGGACGCGGA CGACGAGGCGGCGACGGCGGCGTTGGACGGCCTCGAGCCGCTCAGGATCCCGAACGGCCACCGGGCCAGGCTCGAGACGATCCTGTCCGGGAA      ]
[+] EMBL AU070714             [      CCCACGCNTCTCTCTGCTGCTCTCCCTTGCCCCCGAATGGCGATACTGCCGCCGGCTGCGGCTGCGGCTGCGGCGGAGGACGTCCTCTCGCTGTACGACGCGTGCTGGTTCCGCCGCCTCGTGCTCCTCTCGCCCTCTTCTCCTGCTGCTGTTGCTGCGGACGTCGCGCCTGCCTCTCCGCCGGTGGCGTCGCAGCGGGAGGAGGAGGNGGTGGT GGAGGAGGAGGAGGAGAGGGAGGTGAAGAGATCTCCGCCGGGGACGCTGCGGCACCGGCGGACGCGGAGCGACGAGGCGGCGACGGCGGCGTTGGACGGCCTCGAGCCGCTCAGGATCCCGAACGGCCACCGGGCCAGGCTCGAGACGATCCTGTCCGGGAAGGACGG]




>consensus_5788#0
CCGACTCCCACGCCTCTCTCTGCTGCTCTCCCTTGCCCCCGAATGGCGATACTGCCGCCG
GCTGCGGCTGCGGCTGCGGCGGAGGACGTCCTCTCGCTGTACGACGCGTGCTGGTTCCGC
CGCCTCGTGCTCCTCTCGCCCTCTTCTCCTGCTGCTGTTGCTGCGGACGTCGCGCCTGCC
TCTCCGCCGGTGGCGTCGCAGCGGGAGGAGGAGGNGTAGTCGGAGGAGGAGGAGGAGAGG
GAGGTGAAGAGATCTCCGCCGGGGACGCTGCGGCACCGGCGGACGCGGAGCGACGAGGCG
GCGACGGCGGCGTTGGACGGCCTCGAGCCGCTCAGGATCCCGAACGGCCACCGGGCCAGG
CTCGAGACGATCCTGTCCGGGAAGGACGG

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)