cluster # 5869

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Oryza sativa
cluster # 5869 cluster # 5869 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5869#0 length = 1779 sequences # 3
consensusID : consensus_5869#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1779
fasta sequence
                              [TATCCCTCAACGTCCTGTACCGGATGTGTGATGACTTGTATGCATGACCAGTGAAGGAGCAAAGGGGTTCACTAGCACCAGCCGGGCCGTGCATGGAGCATGAACCGACCGTCCATGAGCTCACGGCCTCGTCACGGCGATGACGTACAGGCGACACACATCCAGCTGGGCCCCTCCTTCCATGTTCCAAGCCATTTCCTTTGGTGAGTTGTTCTTCCTCTTCCCCCCCTCCCGATCGCCCTCGTCGTCTACTTTTCCTCTCAACTTCCCACCGAGCACACCAATAAAAACTGCAGCTGCTGCCCAATAACCTATCTACTCTAGCAGTCTAGCTACGGCTGATGAGCAGGTGTCAATACAAGAGTAGCAAAGCTGAGAATATCTAGTTCCTACTTTGCTAGCTTTCCTAGTAATACTAGACTGCTAGCAGCAGCAATTAGCTATAGTAGCGGCTCCTCCCATGGCGTCTCCTGATGGTGGCGTTGGAGACGGCGGCGCGGAGCCACATGAAGTTATGGACGACCTGCTCGAGATGCGCGAGCAAGCGGCGATGCTCCACAGCATGCTACATGGGACATCGCCGTCGAGCTGTGCGGCGGCGGCGAGCACCAGGCAGCTGAATCAGCTGATAGACGGGGTGATGAGCAGGCTGCAGTCCAGCTCGCTGTCGGTGATGTCGCCTGGAGGAGGAGGAGGAAGAAGAGGATCGGGCGGGAGGAAGAAGAAAGGCGCCAAGGCCGTGGCCGGGCCGCACAGGCGGAGCAGCTCCGGTAGAAGAAGATCGAAAAGTCCTTTTGTCAGGATGGTCACGACCAAGGAGCTGGAGGACGGCAGGCAATGGCGAAAGTACGGGCAGAAACATATACAGGACTCCCCAAATAATCCAAGGAGCTACTACAGGTGCACGCATAGGCCAGACCAAGGTTGTATGGCCACAAAGCAAGTACAGACCTCCGAGTCTAACTCGTCGGAGTTCGTCATCAGCTACTACGGTGAGCACACCTGCAGCGACCCTTCCACCATCCCGTTCGTCGTCGAGGCCGAAGCTCCCGCTGCAGACTACGCGAACCTCATCAGCTTCGGATCCAGCGGCGGCGCGAGCACAAGCAGAGTCGACCCTCTTCGTCAGAGCCGCCATCGTTTGATGGCAGAAGCCGTTGATCCGACGCCGTCCTGCAGCTTCGCCAACTGCCACTCTCCGGTACTGTCCTCGGAGTGCGCCAGCGAGGCGGCGGCGCTCAGCAGCAGCCTGCCGCTCTCCGCCGTGGTGGGATCGGCGGTGACAACGCCGTCGACGTCGATCGTGGGTTCAGCGCCTGCGGATTACGACTGGCCGTCAGGGCTCGCCGGAGGTGACATGGCCGGCAGCTTCCCGTCCTCTCCCAGCAGCCTCGGGTTCATGACTGGCTCCTTTGGGAATCTTCCTGGGGATGACGACGACATGTTTGGCTTCGATCCTTAACAAGGGCTGTGCATGCATACATTCTTGCCATGCTAATTATTGCTACTACTAATATTCAAGAAAAACAAGTCCGCTATTTGCATGCAGAAGTGTATGCATGCATGCATAATACTATTGCTGTGAGGCTATAGCAAATTAGCAATACTTGTAGTACATGTGTGTACTGCTATTGGAGGAAATCCAATATATATACGGTACGTAGTAAATATGTGTATTAGTTGATCGCTGTACTAGTGAGTTGTGTGTATGTGATTTTGTAAGTATTGAAACATAATTTGAAATTAATATATAGTAGTGAAAGTAATAAAAAAAA--AAAA]

[+] EMBL AK110900             [TATCCCTCAACGTCCTGTACCGGATGTGTGATGACTTGTATGCATGACCAGTGAAGGAGCAAAGGGGTTCACTAGCACCAGCCGGGCCGTGCATGGAGCATGAACCGACCGTCCATGAGCTCACGGCCTCGTCACGGCGATGACGTACAGGCGACACACATCCAGCTGGGCCCCTCCTTCCATGTTCCAAGCCATTTCCTTTGGTGAGTTGTTCTTCCTCTTCCCCCCCTCCCGATCGCCCTCGTCGTCTACTTTTCCTCTCAACTTCCCACCGAGCACACCAATAAAAACTGCAGCTGCTGCCCAATAACCTATCTACTCTAGCAGTCTAGCTACGGCTGATGAGCAGGTGTCAATACAAGAGTAGCAAAGCTGAGAATATCTAGTTCCTACTTTGCTAGCTTTCCTAGTAATACTAGACTGCTAGCAGCAGCAATTAGCTATAGTAGCGGCTCCTCCCATGGCGTCTCCTGATGGTGGCGTTGGAGACGGCGGCGCGGAGCCACATGAAGTTATGGACGACCTGCTCGAGATGCGCGAGCAAGCGGCGATGCTCCACAGCATGCTACATGGGACATCGCCGTCGAGCTGTGCGGCGGCGGCGAGCACCAGGCAGCTGAATCAGCTGATAGACGGGGTGATGAGCAGGCTGCAGTCCAGCTCGCTGTCGGTGATGTCGCCTGGAGGAGGAGGAGGAAGAAGAGGATCGGGCGGGAGGAAGAAGAAAGGCGCCAAGGCCGTGGCCGGGCCGCACAGGCGGAGCAGCTCCGGTAGAAGAAGATCGAAAAGTCCTTTTGTCAGGATGGTCACGACCAAGGAGCTGGAGGACGGCAGGCAATGGCGAAAGTACGGGCAGAAACATATACAGGACTCCCCAAATAATCCAAGGAGCTACTACAGGTGCACGCATAGGCCAGACCAAGGTTGTATGGCCACAAAGCAAGTACAGACCTCCGAGTCTAACTCGTCGGAGTTCGTCATCAGCTACTACGGTGAGCACACCTGCAGCGACCCTTCCACCATCCCGTTCGTCGTCGAGGCCGAAGCTCCCGCTGCAGACTACGCGAACCTCATCAGCTTCGGATCCAGCGGCGGCGCGAGCACAAGCAGAGTCGACCCTCTTCGTCAGAGCCGCCATCGTTTGATGGCAGAAGCCGTTGATCCGACGCCGTCCTGCAGCTTCGCCAACTGCCACTCTCCGGTACTGTCCTCGGAGTGCGCCAGCGAGGCGGCGGCGCTCAGCAGCAGCCTGCCGCTCTCCGCCGTGGTGGGATCGGCGGTGACAACGCCGTCGACGTCGATCGTGGGTTCAGCGCCTGCGGATTACGACTGGCCGTCAGGGCTCGCCGGAGGTGACATGGCCGGCAGCTTCCCGTCCTCTCCCAGCAGCCTCGGGTTCATGACTGGCTCCTTTGGGAATCTTCCTGGGGATGACGACGACATGTTTGGCTTCGATCCTTAACAAGGGCTGTGCATGCATACATTCTTGCCATGCTAATTATTGCTACTACTAATATTCAAGAAAAACAAGTCCGCTATTTGCATGCAGAAGTGTATGCATGCATGCATAATACTATTGCTGTGAGGCTATAGCAAATTAGCAATACTTGTAGTACATGTGTGTACTGCTATTGGAGGAAATCCAATATATATACGGTACGTAGTAAATATGTGTATTAGTTGATCGCTGTACTAGTGAGTTGTGTGTATGTGATTTTGTAAGTATTGAAACATAATTTGAAATTAATATATAGTAG                        ]
[-] EMBL CF309076             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGGCGGTGACAACGCCGTCGACGTCGATCGTGGGTTCAGCGCCTGCGGATTACGACTGGCCGTCAGGGCTCGCCGGAGGTGACATGGCCGGCAGCTTCCCGTCCTCTCCCAGCAGCCTCGGGTTCATGACTGGCTCCTTTGGGAATCTTCCTGGGGATGACGACGACATGTTTGGCTTCGATCCTTAACAAGGGCTGTGCATGCATACATTCTTGCCATGCTAATTATTGCTACTACTAATATTCAAGAAAAACAAGTCCGCTATTTGCATGCAGAAGTGTATGCATGCATGCATAATACTATTGCTGTGAGGCTATAGCAAATTAGCAATACTTGTAGTACATGTGTGTACTGCTATTGGAGGAAATCCAATATATATACGGTACGTAGTAAATATGTGTATTAGTTGATCGCTGTACTAGTGAGTTGTGTGTATGTGATTTTGTAAGTATTGAAACATAATTTGAAATTAATATATAGTAGTGAAAGTAATAAAAAAAA  AAAA]
[+] EMBL AU071221             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCTCTCCCAGCAGCCTCGGGTTCATGACTGGCTCCTTTGGGAATCTTCCTGGGGATGACGACGACATGTTTGGCTTCGATCCTTAACAAGGGCTGTGCATGCATACATTCTTGCCATGCTAATTATTGCTACTACTAATATTCAAGAAAAACAAGTCCGCTATTTGCATGCAGAAGTGTATGCATGCATGCATAATACTATTGCTGTGAGGCTATAGCAAATTAGCAATACTTGTAGTACATGTGTGTACTGCTATTGGAGGAAATCCAATATATATACGGTACGTAGTAAATATGTGTATTAGTTGATCGCTGTACTAGTGAGTTGTGTGTATGTGATTTTGTAAGTATTGAAACATAATTTGAAATTAATATATAGTAGTGAAAGTAATATATAAGAGGAAAA]




>consensus_5869#0
TATCCCTCAACGTCCTGTACCGGATGTGTGATGACTTGTATGCATGACCAGTGAAGGAGC
AAAGGGGTTCACTAGCACCAGCCGGGCCGTGCATGGAGCATGAACCGACCGTCCATGAGC
TCACGGCCTCGTCACGGCGATGACGTACAGGCGACACACATCCAGCTGGGCCCCTCCTTC
CATGTTCCAAGCCATTTCCTTTGGTGAGTTGTTCTTCCTCTTCCCCCCCTCCCGATCGCC
CTCGTCGTCTACTTTTCCTCTCAACTTCCCACCGAGCACACCAATAAAAACTGCAGCTGC
TGCCCAATAACCTATCTACTCTAGCAGTCTAGCTACGGCTGATGAGCAGGTGTCAATACA
AGAGTAGCAAAGCTGAGAATATCTAGTTCCTACTTTGCTAGCTTTCCTAGTAATACTAGA
CTGCTAGCAGCAGCAATTAGCTATAGTAGCGGCTCCTCCCATGGCGTCTCCTGATGGTGG
CGTTGGAGACGGCGGCGCGGAGCCACATGAAGTTATGGACGACCTGCTCGAGATGCGCGA
GCAAGCGGCGATGCTCCACAGCATGCTACATGGGACATCGCCGTCGAGCTGTGCGGCGGC
GGCGAGCACCAGGCAGCTGAATCAGCTGATAGACGGGGTGATGAGCAGGCTGCAGTCCAG
CTCGCTGTCGGTGATGTCGCCTGGAGGAGGAGGAGGAAGAAGAGGATCGGGCGGGAGGAA
GAAGAAAGGCGCCAAGGCCGTGGCCGGGCCGCACAGGCGGAGCAGCTCCGGTAGAAGAAG
ATCGAAAAGTCCTTTTGTCAGGATGGTCACGACCAAGGAGCTGGAGGACGGCAGGCAATG
GCGAAAGTACGGGCAGAAACATATACAGGACTCCCCAAATAATCCAAGGAGCTACTACAG
GTGCACGCATAGGCCAGACCAAGGTTGTATGGCCACAAAGCAAGTACAGACCTCCGAGTC
TAACTCGTCGGAGTTCGTCATCAGCTACTACGGTGAGCACACCTGCAGCGACCCTTCCAC
CATCCCGTTCGTCGTCGAGGCCGAAGCTCCCGCTGCAGACTACGCGAACCTCATCAGCTT
CGGATCCAGCGGCGGCGCGAGCACAAGCAGAGTCGACCCTCTTCGTCAGAGCCGCCATCG
TTTGATGGCAGAAGCCGTTGATCCGACGCCGTCCTGCAGCTTCGCCAACTGCCACTCTCC
GGTACTGTCCTCGGAGTGCGCCAGCGAGGCGGCGGCGCTCAGCAGCAGCCTGCCGCTCTC
CGCCGTGGTGGGATCGGCGGTGACAACGCCGTCGACGTCGATCGTGGGTTCAGCGCCTGC
GGATTACGACTGGCCGTCAGGGCTCGCCGGAGGTGACATGGCCGGCAGCTTCCCGTCCTC
TCCCAGCAGCCTCGGGTTCATGACTGGCTCCTTTGGGAATCTTCCTGGGGATGACGACGA
CATGTTTGGCTTCGATCCTTAACAAGGGCTGTGCATGCATACATTCTTGCCATGCTAATT
ATTGCTACTACTAATATTCAAGAAAAACAAGTCCGCTATTTGCATGCAGAAGTGTATGCA
TGCATGCATAATACTATTGCTGTGAGGCTATAGCAAATTAGCAATACTTGTAGTACATGT
GTGTACTGCTATTGGAGGAAATCCAATATATATACGGTACGTAGTAAATATGTGTATTAG
TTGATCGCTGTACTAGTGAGTTGTGTGTATGTGATTTTGTAAGTATTGAAACATAATTTG
AAATTAATATATAGTAGTGAAAGTAATAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case