cluster # 5880

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Oryza sativa
cluster # 5880 cluster # 5880 Sequences # 3 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_5880#0 length = 1814 sequences # 3
consensusID : consensus_5880#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1814
fasta sequence
                              [ACAGAGTTGGGTGGCCAAGAACAAGAACAGCAAAGCAACCATGACCCAAGCTCACTCAAAATCTTGCTTCCACCAGTTCTGGGACGGACTCCAGATCAAGAGGAGCAGCGATAGCTTCACTGTAGAGCTACTGCCATCCCTTGGTGCAACTATAAACCACTCCAACAAGTTGCAGAAGTTCATCATATCGCCTTATGATCCCCAGTACAGATCCTGGGAGCTGTTCCTTATAGTCCTAGTTGTTTACTCTGCCTGGATTTGTCCGTTTGAACTAGCATTCCTGAGGGACTTACCATCTAAGCTTTTGCTAGTTGAGAACATTGTGGATATATTCTTTGCCATTGATATTGGTTTGACGTTCTTCGTTGCTTATGTCGATAGCAAAACACATCTTCTTGTGGATGACCGAAAGAGAATTGCAATGAGGTACCTATCCACTTGGTTTATCTTTGATGTATGTTCAACAGCACCATTTCAACCAATCATCCTTCTATTTACACACAAGGGGAATGACATTGCTTTCAAGGTACTCAATTTGCTCAGGCTGTGGCGTCTTCATCGAGTCAGTTCACTATTTGCCAGGCTGGAGAAAGACATCCGATTCAACTATTTCTGGACTAGGTGCTCAAAACTTATTTCTGTGACCCTCTTCGCAGTACATTGTGCAGGATGCTTCAATTATATGATTGCTGACAGATATCCCAACCCAGAGAAAACATGGATAGGAGCTGTGATGTCAACTTTCAGATCAGAGAGCTTATGGACTAGATATATTACTGCTCTTTACTGGTCCATTACAACACTGACAACAACAGGATATGGGGACCTACATGCTGAAAATCCAACAGAGATGCTATTTGATATTGTCTATATGATGTTTAATCTGGGCTTGACAGCTTATCTCATTGGCAACATGACCAACCTAGTTGTCCATGGGACCAGCCGCACCAGGAAATTTAGGGACTCAATCCAAGCAGCATCAGAGTTTGCAGCACGCAATCAGCTACCTGAGAACATAAAGCAGCAAGTGCTATCTCACTTCTGCCTACAATTCAAGACAGAGGGACTCAACCAGCAGGTCATGTTAGACTGTCTACCAAAAGGAATCCGCTCAAGCATAGCATACAGCTTATTCTTTCCGATCATCCGGCAAGCCTATCTCTTCAATGGAGTATCTGGCAATTTCATTGCAGAACTGGTCATGGAAGTGCAGGCTGAGTACTTCCCACCAAAGGAAGATATAATATTGCAGAATGAAGGAGAAGCAGATGTTTACATAGTAGTTTCAGGAGCAGTGAATATAATAACAACAATACATGGGAATGAGCAGGTATATGAGAAAATTGCAGAGGGAGAAATGTTTGGAGAGGTTGGTTCTTTATGTAACATACCCCAGCCATTTACTTGCCGCACAGCGGAGCTATCACAGCTTTTAAGAATAAGCAAAACAAGGCTTAGAGAGATCATTGAAGAAAACAGGGAAGACAGTAACATTCTAATGAACAACCTAGTTCAGAAGCTGAAGCTACGAGAAAGTTTACCTGACATGAATCAACCAGACCGAAGATTCTTGAGCAAGTATGAGCTATTCCACGTTCCTCGAGAAGCATGGCTGCTGAAAAAGTCACAACTACATTACACAGAGCACACAAGTAGGGATTCTAGTAACAACACTCCAGTATTTGGAGGTGACAGATATTCCAGACAGTTACTTGTAGAAGCAACCCGATCTTCGGCATCAGAAAACGAAAATAGCAGTATGACAGATAAAGAAGAGAACCATGATGAAGTTCACACAAACTGTGAGATCAAAA]

[+] EMBL CF310149             [ACAGAGTTGGGTGGCCAAGAACAAGAACAGCAAAGCAACCATGACCCAAGCTCACTCAAAATCTTGCTTCCACCAGTTCTGGGACGGACTCCAGATCAAGAGGAGCAGCGATAGCTTCACTGTAGAGCTACTGCCATCCCTTGGTGCAACTATAAACCACTCCAACAAGTTGCAGAAGTTCATCATATCGCCTTATGATCCCCAGTACAGATCCTGGGAGCTGTTCCTTATAGTCCTAGTTGTTTACTCTGCCTGGATTTGTCCGTTTGAACTAGCATTCCTGAGGGACTTACCATCTAAGCTTTTGCTAGTTGAGAACATTGTGGATATATTCTTTGCCATTGATATTGGTTTGACGTTCTTCGTTGCTTATGTCGATAGCAAAACACATCTTCTTGTGGATGACCGAAAGAGAATTGCAATGAGGTACCTATCCACTTGGTTTATCTTTGATGTATGTTCAACAGCACCATTTCAACCAATCATCCTTCTATTTACACACAAGGGGAATGACATTGCTTTCAAGGTACTCAATTTGCTCAGGCTGTGGCGTCTTCATCGAGTCAGTTCACTATTTGCCAGGCTGGAGAAAGACATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK100808             [          GTGGCCAAGAACAAGAACAGCAAAGCAACCATGACCCAAGCTCACTCAAAATCTTGCTTCCACCAGTTCTGGGATGGACTCCAGATCAAGAGGAGCAGCGATAGCTTCACTGTAGAGCTACTGCCATCCCTTGGTGCAACTATAAACCACTCCAACAAGTTGCAGAAGTTCATCATATCGCCTTATGATCCCCGGTACAGATCCTGGGAGCTGTTCCTTATAGTCCTAGTTGTTTACTCTGCCTGGATTTGTCCGTTTGAACTAGCATTCCTGAGGGACTTACCATCTAAGCTTTTGCTAGTTGAGAACATTGTGGATATATTCTTTGCCATTGATATTGTTTTGACGTTCTTCGTTGCTTATGTCGATAGCAAAACACATCTTCTTGTGGATGACCGAAAGAGAATTGCAATGAGGTACCTATCCACTTGGTTTATCTTTGATGTATGTTCAACAGCACCATTTCAACCAATCATCCTTCTATTTACACACAAGGGGAATGACATTGCTTTCAAGGTACTCAATTTGCTCAGGCTGTGGCGTCTTCACCGAGTCAGTTCACTATTTGCCAGGCTGGAGAAAGACATCCGATTCAACTATTTCTGGACTAGGTGCTCAAAACTTATTTCTGTGACCCTCTTCGCAGTACATTGTGCAGGATGCTTCAATTATATGATTGCTGACAGATATCCCAACCCAGAGAAAACATGGATAGGAGCTGTGATGTCAACTTTCAGATCAGAGAGCTTATGGACTAGATATATTACTGCTCTTTACTGGTCCATTACAACACTGACAACAACAGGATATGGGGACCTACATGCTGAAAATCCAACAGAGATGCTATTTGATATTGTCTATATGATGTTTAATCTGGGCTTGACAGCTTATCTCATTGGCAACATGACCAACCTAGTTGTCCATGGGACCAGCCGCACCAGGAAATTTAGGGACTCAATCCAAGCAGCATCAGAGTTTGCAGCACGCAATCAGCTACCTGAGAACATAAAGCAGCAAGTGCTATCTCACTTCTGCCTACAATTCAAGACAGAGGGACTCAACCAGCAGGTCATGTTAGACTGTCTACCAAAAGGAATCCGCTCAAGCATAGCATACAGCTTATTCTTTCCGATCATCCGGCAAGCCTATCTCTTCAATGGAGTATCTGGCAATTTCATTGCAGAACTGGTCATGGAAGTGCAGGCTGAGTACTTCCCACCAAAGGAAGATATAATATTGCAGAATGAAGGAGAAGCAGATGTTTACATAGTAGTTTCAGGAGCAGTGAATATAATAACAACAATACATGGGAATGAGCAGGTATATGAGAAAATTGCAGAGGGAGAAATGTTTGGAGAGGTTGGTTCTTTATGTAACATACCCCAGCCATTTACTTGCCGCACAGCGGAGCTATCACAGCTTTTAAGAATAAGCAAAACAAGGCTTAGAGAGATCATTGAAGAAAACAGGGAAGACAGTAACATTCTAATGAACAACCTAGTTCAGAAGCTGAAGCTACGAGAAAGTTTACCTGACATGAATCAACCAGACCGAAGATTCTTGAGCAAGTATGAGCTATTCCACGTTCCTCGAGAAGCATGGCTGCTGAAAAAGTCACAACTACATTACACAGAGCAC                                                                                                                                                                      ]
[-] EMBL CF310150             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AATAAGCAAAACAAGGCTTAGAGAGATCATTGAAGAAAACAGGGAAGACAGTAACATTCTAATGAACAACCTAGTTCAGAAGCTGAAGCTACGAGAAAGTTTACCTGACATGAATCAACCAGACCGAAGATTCTTGAGCAAGTATGAGCTATTCCACGTTCCTCGAGAAGCATGGCTGCTGAAAAAGTCACAACTACATTACACAGAGCACACAAGTAGGGATTCTAGTAACAACACTCCAGTATTTGGAGGTGACAGATATTCCAGACAGTTACTTGTAGAAGCAACCCGATCTTCGGCATCAGAAAACGAAAATAGCAGTATGACAGATAAAGAAGAGAACCATGATGAAGTTCACACAAACTGTGAGATCAAAA]




>consensus_5880#0
ACAGAGTTGGGTGGCCAAGAACAAGAACAGCAAAGCAACCATGACCCAAGCTCACTCAAA
ATCTTGCTTCCACCAGTTCTGGGACGGACTCCAGATCAAGAGGAGCAGCGATAGCTTCAC
TGTAGAGCTACTGCCATCCCTTGGTGCAACTATAAACCACTCCAACAAGTTGCAGAAGTT
CATCATATCGCCTTATGATCCCCAGTACAGATCCTGGGAGCTGTTCCTTATAGTCCTAGT
TGTTTACTCTGCCTGGATTTGTCCGTTTGAACTAGCATTCCTGAGGGACTTACCATCTAA
GCTTTTGCTAGTTGAGAACATTGTGGATATATTCTTTGCCATTGATATTGGTTTGACGTT
CTTCGTTGCTTATGTCGATAGCAAAACACATCTTCTTGTGGATGACCGAAAGAGAATTGC
AATGAGGTACCTATCCACTTGGTTTATCTTTGATGTATGTTCAACAGCACCATTTCAACC
AATCATCCTTCTATTTACACACAAGGGGAATGACATTGCTTTCAAGGTACTCAATTTGCT
CAGGCTGTGGCGTCTTCATCGAGTCAGTTCACTATTTGCCAGGCTGGAGAAAGACATCCG
ATTCAACTATTTCTGGACTAGGTGCTCAAAACTTATTTCTGTGACCCTCTTCGCAGTACA
TTGTGCAGGATGCTTCAATTATATGATTGCTGACAGATATCCCAACCCAGAGAAAACATG
GATAGGAGCTGTGATGTCAACTTTCAGATCAGAGAGCTTATGGACTAGATATATTACTGC
TCTTTACTGGTCCATTACAACACTGACAACAACAGGATATGGGGACCTACATGCTGAAAA
TCCAACAGAGATGCTATTTGATATTGTCTATATGATGTTTAATCTGGGCTTGACAGCTTA
TCTCATTGGCAACATGACCAACCTAGTTGTCCATGGGACCAGCCGCACCAGGAAATTTAG
GGACTCAATCCAAGCAGCATCAGAGTTTGCAGCACGCAATCAGCTACCTGAGAACATAAA
GCAGCAAGTGCTATCTCACTTCTGCCTACAATTCAAGACAGAGGGACTCAACCAGCAGGT
CATGTTAGACTGTCTACCAAAAGGAATCCGCTCAAGCATAGCATACAGCTTATTCTTTCC
GATCATCCGGCAAGCCTATCTCTTCAATGGAGTATCTGGCAATTTCATTGCAGAACTGGT
CATGGAAGTGCAGGCTGAGTACTTCCCACCAAAGGAAGATATAATATTGCAGAATGAAGG
AGAAGCAGATGTTTACATAGTAGTTTCAGGAGCAGTGAATATAATAACAACAATACATGG
GAATGAGCAGGTATATGAGAAAATTGCAGAGGGAGAAATGTTTGGAGAGGTTGGTTCTTT
ATGTAACATACCCCAGCCATTTACTTGCCGCACAGCGGAGCTATCACAGCTTTTAAGAAT
AAGCAAAACAAGGCTTAGAGAGATCATTGAAGAAAACAGGGAAGACAGTAACATTCTAAT
GAACAACCTAGTTCAGAAGCTGAAGCTACGAGAAAGTTTACCTGACATGAATCAACCAGA
CCGAAGATTCTTGAGCAAGTATGAGCTATTCCACGTTCCTCGAGAAGCATGGCTGCTGAA
AAAGTCACAACTACATTACACAGAGCACACAAGTAGGGATTCTAGTAACAACACTCCAGT
ATTTGGAGGTGACAGATATTCCAGACAGTTACTTGTAGAAGCAACCCGATCTTCGGCATC
AGAAAACGAAAATAGCAGTATGACAGATAAAGAAGAGAACCATGATGAAGTTCACACAAA
CTGTGAGATCAAAA
clustalw multiple alignements is not computed in this case