cluster # 5912

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Oryza sativa
cluster # 5912 cluster # 5912 Sequences # 3 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_5912#0 length = 581 sequences # 3

consensusID : consensus_5912#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 581
fasta sequence

                              [GTCGCGCAGC-TTAAGAGCTTCTTCGTTGTTGCTGCTGCCGTGTGTTGCTAAGCTTCAAGATGTCGCAGAGAGCCGGGAGGCACCAGAGGAGGGCGTCGCAGAGCGTGTTCGTGCTGCCGGAGAACTTCGCCAGCCTCGAGGACGTGGCGGCGGACGTCATCGGCGGCGGCGGCGCCGAGCAGCGGAAGCCCGCGGCGGCGGCGGACGCGTCGTCGGAGCAGCAGCCGGCGAGGATGCAGGCGGGGCGGCACCGGCGGGCAATGTCGATGGCCGTGGCGGCCAGGGACCTGGAGATGATCACGGAGGACATCGCCAGCTACAAGTACGGTGCTTAGGCTACGACCTCACGGCTCACGCATGTGTTGGTA-CGTGTTCCAACAG-CGGCGGC-GGTGTA-CT-CCT-GGGCTA-GGTG-CAGAAAAAGGGTTGGGGTGGTGGTTCTTCGATCGAGACTGATCTCGTGTCCTGTTTAGCATGCCGTTTGATTGTTTTTCTCGTGATGTATTTCCTCCTCCTCCTCGTGATGCGTAATTTCTATCTCGATCACAAGTAAAGAGAAGAAANCAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU075817             [GTCGCGCAGCTTTAAGAGCTTCTTCGTTGTTGCTGCTNCCGTGTGTTGCTAAGCTTCAAGATGTCGCANAGAGCCGGGAGGCACCAGAGGAGGGCGTCGCAGAGCGTGTTCGTGCTGCCGGAGAACTTCGCCAGCCTCGAGGACGTGNCGGCGGACGTCATCGGCGGCGGCGGCGCCGAGCAGCGGAAGCCCGCGGCGGCGGCGGACGCGTCGTCGGAGCAGCAGCCGGCGAGGATGCAGGCGGGGCGGCACCGGCGGGCAATGTCGATGGCCGTGGCGGCCAGGGACCTGGANATGATCACGGAGGACATCGCCAGCTACAAGTACGGTGCTTAGGCTACGACCTCACGGCTCACGCATGTGTTGGTA CGTGTTCCAACAG CGGCGGC GGTGTA CT CCT GGGCTA GGTG CAGAAAAAGGGTTGGGGTGGTGGTTCTTCGATCGAGACTGATCTCGTGTCCTGTTTAGCATGCCGTTTGATTGTTTTTCTCGTGATGTATTTCCTCCTCCTCCTCGTGATGCGTAATTTCTATCTCGATCACAAGTAAAGAGAAGAAANCAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU075816             [GTCGCGCAGC TTAAGAGCTTCTTCGTTGTTGCTGCTGCCGTGTGTTGCTAAGCTTCAAGATGTCGCAGAGAGCCGGGAGGCACCAGAGGAGGGCGTCGCAGAGCGTGTTCGTGCTGCCGGAGAACTTCGCCAGCCTCGAGGACGTGGCGGCGGACGTCATCGGCGGCGGCGGCGCCGAGCAGCGGAAGCCCGCGGCGGCGGCGGACGCGTCGTCGGAGCAGCAGCCGGCGAGGATGCAGGCGGGGCGGCACCGGCGGGCAATGTCGATGGCCGTGGCGGCCAGGGACCTGGAGATGATCACGGAGGACATCGCCAGCTACAAGTACGGTGCTTAGGCTACGACCTCACGGCTCACGCATGTGTTGGTA CGTGTTCCAACAG CGGCGGC GGTGTA CT CCT GGGCTA GGTG CAGAAAAAGGGTTGGGGTGGTGGTTCTTCGATCGAGACTGATCTCGTGTCCTGTTTAGCATGCCGTTTGATTGTTTTTCTCGTGATGTATTTCCTCCTCCTCCTCGTGA                                                               ]
[+] EMBL CA753436             [       AGC TTAAGAGCTTCTTCGTTGTTGCTGCTGCCGTGTGTTGCTAAGCTTCAAGATGTCGCAGAGAGCCGGGAGGCACCAGAGGAGGGCGTCGCAGAGCGTGTTCGTGCTGCCGGAGAACTTCGCCAGCCTCGAGGACGTGGCGGCGGACGTCATCGGCGGCGGCGGCGCCGAGCAGCGGAAGCCCGCGGCGGCGGCGGACGCGTCGTCGGAGCAGCAGCCGGCGAGGATGCAGGCGGGGCGGCACCGGCGGGCAATGTCGATGGCCGTGGCGGCCAGGGACCTGGAGATGATCACGGAGGACATCGCCAGCTACAAGTACGGTGCTTAGGCTACGACCTCACGGCTCACGCATGTGTAGGTACCGTGTTCCAACAGCCGGCGGCGGGTGTACCTCCCTGGGGCTAGGGTGCCAGAAAAAaaggggg                                                                                                                                                             ]




>consensus_5912#0
GTCGCGCAGCTTAAGAGCTTCTTCGTTGTTGCTGCTGCCGTGTGTTGCTAAGCTTCAAGA
TGTCGCAGAGAGCCGGGAGGCACCAGAGGAGGGCGTCGCAGAGCGTGTTCGTGCTGCCGG
AGAACTTCGCCAGCCTCGAGGACGTGGCGGCGGACGTCATCGGCGGCGGCGGCGCCGAGC
AGCGGAAGCCCGCGGCGGCGGCGGACGCGTCGTCGGAGCAGCAGCCGGCGAGGATGCAGG
CGGGGCGGCACCGGCGGGCAATGTCGATGGCCGTGGCGGCCAGGGACCTGGAGATGATCA
CGGAGGACATCGCCAGCTACAAGTACGGTGCTTAGGCTACGACCTCACGGCTCACGCATG
TGTTGGTACGTGTTCCAACAGCGGCGGCGGTGTACTCCTGGGCTAGGTGCAGAAAAAGGG
TTGGGGTGGTGGTTCTTCGATCGAGACTGATCTCGTGTCCTGTTTAGCATGCCGTTTGAT
TGTTTTTCTCGTGATGTATTTCCTCCTCCTCCTCGTGATGCGTAATTTCTATCTCGATCA
CAAGTAAAGAGAAGAAANCAAAAAAAAAAAAAAAAAAAAAA

clustalw multiple alignements is not computed in this case