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Oryza sativa
cluster # 6172 cluster # 6172       Sequences # 4       consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6172#0 length = 1203 sequences # 4  
consensusID : consensus_6172#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1203
fasta sequence 
                              [AGCTAACCTACCTACACTACACTACACCACACACTACACTTGGAGAGAAGCACACGTAGCTAGAGTGATCGATTCATTTTCTTGCTCGATCTTGATCGGTATGGCTGGTGCTACGGCTGCCGGCGCTGCCGCTGCCGCGGCGG-GGACGGGAGCCGGGTCGCCGTGCGGCGCGTGCAAGTTCTTGCGGCGGCGGTGCGTGCCGGAGTGCGTGTTCGCGCCCTACTTCAGCTCGGAGCAAGGGGCGGCGAGGTTCGCGGCGATCCACAAGGTGTTCGGCGCCAGCAACGCCTCCAAGCTCCTCTCCCACCTCCCCGTCGCCGACCGCTGCGAGGCCGTCGTCACCATCACCTACGAGGCCCAGGCCAGGCTCCGCGACCCCGTCTATGGCTGCGTCGCCCAAATCTTCGCCCTCCAGCAGCAGGTCGCGATCCTGCAAGCGCAGCTGATGCAGGCGAGGGCGCAGCTGGCGTGCGGCATCCAGAGCAGCTCGCACTCTCCGGTGAGCTGGCCGGACAGCGGCAGCATCAGCGCGCTACTCCGGCAGGACATGGCGAGAAGGCCGCCCGGCGGCGCCCTCGACGACTGCTTCGGCGGCGGCGGCGCGCTGCTGCCGGAGCTCATGGCGGCCGGCTTCAAGGACGACGTCGCCGCCGTGCAGATGCAGCAGCATTGCTCCAAGGCGGTGGACGCCGGCGAGCTCCAGTATCTGGCCCAGGCGATGATGAGATCAACCTCCAACT-ACTCTCAGTAGAAAGAAAAATCAAACAATGCAACGCTTTGCATGCAGGAGTTAGAGAGTGGACAAGCAAAAATTTAGCCTGTGTACTACTGAACTTTTTTATCAGTGCAACGTCATAGTGAAGCAATTAGTCTGCTTCATGATGATGATTAGTACGTAGTACTACTAAATAACACTAATAGCTTCTTGCAACAAGGTCTTGGTAATGACATCACACATCACTGGACCCTGGCCATGCATGCATGTCCAAGTATAATCTTGCTGACCTAGTTGGTGCAATCTTCTTATTTCCAAAATTTGTTTGAGTGTTTAGCTAGGTTAAATCGAGACAGATGAAACAAGGTTCTGAATTCAGTATCTATGTGTGTCATTTCATATGTGTCTCAGGCGATGAACTAGTGTAAAACTGCATTAAAAATTTTCTGATCTATCCCTAGTTTTTATAATAATTTCCAGTTCAAAAA]

[+] EMBL AK064187             [AGCTAACCTACCTACACTACACTACACCACACACTACACTTGGAGAGAAGCACACGTAGCTAGAGTGATCGATTCATTTTCTTGCTCGATCTTGATCGGTATGGCTGGTGCTACGGCTGCCGGCGCTGCCGCTGCCGCGGCGG GGACGGGAGCCGGGTCGCCGTGCGGCGCGTGCAAGTTCTTGCGGCGGCGGTGCGTGCCGGAGTGCGTGTTCGCGCCCTACTTCAGCTCGGAGCAAGGGGCGGCGAGGTTCGCGGCGATCCACAAGGTGTTCGGCGCCAGCAACGCCTCCAAGCTCCTCTCCCACCTCCCCGTCGCCGACCGCTGCGAGGCCGTCGTCACCATCACCTACGAGGCCCAGGCCAGGCTCCGCGACCCCGTCTATGGCTGCGTCGCCCAAATCTTCGCCCTCCAGCAGCAGGTCGCGATCCTGCAAGCGCAGCTGATGCAGGCGAGGGCGCAGCTGGCGTGCGGCATCCAGAGCAGCTCGCACTCTCCGGTGAGCTGGCCGGACAGCGGCAGCATCAGCGCGCTACTCCGGCAGGACATGGCGAGAAGGCCGCCCGGCGGCGCCCTCGACGACTGCTTCGGCGGCGGCGGCGCGCTGCTGCCGGAGCTCATGGCGGCCGGCTTCAAGGACGACGTCGCCGCCGTGCAGATGCAGCAGCATTGCTCCAAGGCGGTGGACGCCGGCGAGCTCCAGTATCTGGCCCAGGCGATGATGAGATCAACCTCCAACT ACTCTCAGTAGAAAGAAAAATCAAACAATGCAACGCTTTGCATGCAGGAGTTAGAGAGTGGACAAGCAAAAATTTAGCCTGTGTACTACTGAGCTTTTTTATCAGTGCAACGTCATAGTGAAGCAATTAGTCTGCTTCATGATGATGATTAGTACGTAGTACTACTAAATAACACTAATAGCTTCTTGCAACAAGGTCTTGGTAATGACATCACACATCACTGGACCCTGGCCATGCATGCAT                                                                                                                                                                                                                            ]
[+] EMBL AK103441             [        TACCTACACTACACTACACCACACACTACACTTGGAGAGAAGCACACGTAGCTAGAGTGATCGATTCATTTTCTTGCTCGATCTTGATCGGTATGGCTGGTGCTACGGCTGCCGGCGCTGCCGCTGCCGCGGCGG GGACGGGAGCCGGGTCGCCGTGCGGCGCGTGCAAGTTCTTGCGGCGGCGGTGCGTGCCGGAGTGCGTGTTCGCGCCCTACTTCAGCTCGGAGCAAGGGGCGGCGAGGTTCGCGGCGATCCACAAGGTGTTCGGCGCCAGCAACGCCTCCAAGCTCCTCTCCCACCTCCCCGTCGCCGACCGCTGCGAGGCCGTCGTCACCATCACCTACGAGGCCCAGGCCAGGCTCAGCGACCCCGTCTATGGCTGCGTCGCCCAAATCTTCGCCCTCCAGCAGCAGGTCGCGATCCTGCAAGCGCAGCTGATGCAGGCGAGGGCGCAGCTGGCGTGCGGCATCCAGAGCAGCTCGCACTCTCCGGTGAGCTGGCCGGACAGCGGCAGCATCAGCGCGCTACTCCGGCAGGACATGGCGAGAAGGCCGCCCGGCGGCGCCCTCGACGACTGCTTCGGCGGCGGCGGCGCGCTGCTGCCGGAGCTCATGGCGGCCGGCTTCAAGGACGACGTCGCCGCCGTGCAGATGCAGCAGCATTGCTCCAAGGCGGTGGACGCCGGCGAGCTCCAGTATCTGGCCCAGGCGATGATGAGATCAACCTCCAACT ACTCTCAGTAGAAAGAAAAATCAAACAATGCAACGCTTTGCATGCAGGAGTTAGAGAGTGGACAAGCAAAAATTTAGCCTGTGTACTACTGAACTTTTTTATCAGTGCAACGTCATAGTGAAGCAATTAGTCTGCTTCATGATGATGATTAGTACGTAGTACTACTAAATAACACTAAT                                                                                                                                                                                                                                                                                            ]
[+] EMBL C26871               [                                                             AGAGTGATCGATTCATTTTCTTGCTCGATCTTGATCGGTATGGCTGGTGCTANGGCTGNCGGCGCTGCCGCTGCCGCGNCGGNGGACGGGAGCCGNGTCGCCGTGCGGCGCGTGCAAGTTCTTGCGGCGGCGGTGCGTGCCGGAGTGCGTGTTCGCGCCCTACTTCAGCTCGGAGCAAGGGGCGGCGAGGTTCGCGGCGATCCACAAGGTGTTCGGCGCCA CAACGCCTCCAAGCTCCTCTCCCACCTCCCCGTCGCCGACCGCTGCNAGGCCGTCGTNACCATCACCTACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU100784             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AGGCGATNATGAGATCAACCTCCAANTAACTNTCAGTAGAAAGAAAAATCAAACAATGCAACGCTTTGCATGCAGGAGTTAGAGAGTGGACAAGCAAAAATTTAGCCTGTGTACTACTGAACTTTTTTATCAGTGCAACGTCATAGTGAAGCAATTAGTCTGCTTCATGATGATGATTAGTACGTAGTACTACTAAATAACACTAATAGCTTCTTGCAACAAGGTCTTGGTAATGACATCACACATCACTGGACCCTGGCCATGCATGCATGTCCAAGTATAATCTTGCTGACCTAGTTGGTGCAATCTTCTTATTTCCAAAATTTGTTTGAGTGTTTAGCTAGGTTAAATCGAGACAGATGAAACAAGGTTCTGAATTCAGTATCTATGTGTGTCATTTCATATGTGTCTCAGGCGATGAACTAGTGTAAAACTGCATTAAAAATTTTCTGATCTATCCCTAGTTTTTATAATAATTTCCAGTTCAAAAA]




>consensus_6172#0
AGCTAACCTACCTACACTACACTACACCACACACTACACTTGGAGAGAAGCACACGTAGC
TAGAGTGATCGATTCATTTTCTTGCTCGATCTTGATCGGTATGGCTGGTGCTACGGCTGC
CGGCGCTGCCGCTGCCGCGGCGGGGACGGGAGCCGGGTCGCCGTGCGGCGCGTGCAAGTT
CTTGCGGCGGCGGTGCGTGCCGGAGTGCGTGTTCGCGCCCTACTTCAGCTCGGAGCAAGG
GGCGGCGAGGTTCGCGGCGATCCACAAGGTGTTCGGCGCCAGCAACGCCTCCAAGCTCCT
CTCCCACCTCCCCGTCGCCGACCGCTGCGAGGCCGTCGTCACCATCACCTACGAGGCCCA
GGCCAGGCTCCGCGACCCCGTCTATGGCTGCGTCGCCCAAATCTTCGCCCTCCAGCAGCA
GGTCGCGATCCTGCAAGCGCAGCTGATGCAGGCGAGGGCGCAGCTGGCGTGCGGCATCCA
GAGCAGCTCGCACTCTCCGGTGAGCTGGCCGGACAGCGGCAGCATCAGCGCGCTACTCCG
GCAGGACATGGCGAGAAGGCCGCCCGGCGGCGCCCTCGACGACTGCTTCGGCGGCGGCGG
CGCGCTGCTGCCGGAGCTCATGGCGGCCGGCTTCAAGGACGACGTCGCCGCCGTGCAGAT
GCAGCAGCATTGCTCCAAGGCGGTGGACGCCGGCGAGCTCCAGTATCTGGCCCAGGCGAT
GATGAGATCAACCTCCAACTACTCTCAGTAGAAAGAAAAATCAAACAATGCAACGCTTTG
CATGCAGGAGTTAGAGAGTGGACAAGCAAAAATTTAGCCTGTGTACTACTGAACTTTTTT
ATCAGTGCAACGTCATAGTGAAGCAATTAGTCTGCTTCATGATGATGATTAGTACGTAGT
ACTACTAAATAACACTAATAGCTTCTTGCAACAAGGTCTTGGTAATGACATCACACATCA
CTGGACCCTGGCCATGCATGCATGTCCAAGTATAATCTTGCTGACCTAGTTGGTGCAATC
TTCTTATTTCCAAAATTTGTTTGAGTGTTTAGCTAGGTTAAATCGAGACAGATGAAACAA
GGTTCTGAATTCAGTATCTATGTGTGTCATTTCATATGTGTCTCAGGCGATGAACTAGTG
TAAAACTGCATTAAAAATTTTCTGATCTATCCCTAGTTTTTATAATAATTTCCAGTTCAA
AAA

clustalw multiple alignements is not computed in this case
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)