cluster # 6353

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Oryza sativa
cluster # 6353 cluster # 6353 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6353#0 length = 775 sequences # 4

consensusID : consensus_6353#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 775
fasta sequence

                              [TTCTTTTTTTTTTTTTTTTTAAAGATAAATGAATTGAATTTTGGCCATGGGGGCCCTTTAACAAATCATCATCACAGTATGCACAAACCAATATATCATCCTCTCATCATGTTGTGTACTACATTCTAAAAATCAAAACAAACGGCTTAAGATCAGTCTGTTACAGAACGAGCTAATCTACCTGTTGCCCGAGTAGAAAACTCCATTGGCAAACATGACCACACTCAGTGCCCAGTAATACAGATTCAGTAATTCGGCCATTTTTGTTCTAATCTGAGTGTGTTGATAATAAACAGAGAACTTTCTAAACGTTTCAACTGCTCAGGTTTCAATGGTGGCGCTCTCAACAGAGAGCACACAATCTATCTTCATGGATCAAAGGTGCTCAATCTCGCCTTATCGTTTCCGCGACCTCCTGGGCGCTGCTTCCTCGTCACTCTCACTGTCATCGTCTCGGAGGGCACTTCTACCGTATCTGTCCCCTTGTCT-CGTCCTCTCTCCTTCTGCTCCAGAATTCCCAGTGGCGTCATGACCCCTGCTTCCCTGATCTGAAGTTGTCTCATACCTGTCACCCCTCTCACCACCTGGCCTTCTTTGCTCCCGCTTCGTGCCACGGTTATTTGGTGGAGGTGGTGGGGGCATGAAGGGAGCCATACCAACGGGTCGATTTGGCCGTCCAGGCCCACCCATTCCCAAGCCTCCCATTAGCGGTCCACGACCAGGACCCATCATCATTTCTAGCCCCATAGGAAACATGCCCCCAGGTTGTGGGGGC]

[+] EMBL CA761006             [TTCTTTTTTTTTTTTTTTTTAAAGATAAATGAATTGAATTTTGGCCATGGGGGCCCTTTAACAAATCATCATCACAGTATGCACAAACCAATATATCATCCTCTCATCATGTTGTGTACTACATTCTAAAAATCAAAACAAACGGCTTAAGATCAGTCTGTTACAGAACGAGCTAATCTACCTGTTGCCCGAGTAGAAAACTCCATTGGCAAACATGACCACACTCAGTGCCCAGTAATACAGATTCAGTAATTCGGCCATTTTTGTTCTAATCTGAGTGTGTTGATAATAAACAGAGAACTTTCTAAACGTTTCAACTGCTCAGGTTTCAATGGTGGCGCTCTCAACAGAGAGCACACAATCTATCTTCATGGATCAAAGGTGCTCAATCTCGCCTTATCGTTTCCGCGACCTCCTGGGCGCTGCTTCCTCGTCACTCTCACTGTCATCGTCTCGGAGGGCACTTCTACCGTATCTGTCCCCTTGTCT CGTCCTCT                                                                                                                                                                                                                                                                                      ]
[-] EMBL C96907               [        TTTTTTGGAAGTAAAGATAAATGAATTGAATTTTGGCCATGGGGGCCCTTTAACAAATCATCATCACAGTATGCACAAACCAATATATCATCCTCTCATCATGTTGTGTACTACATTCTAAAAATCAAAACAAACGGCTTAAGATCAGTCTGTTACAGAACGAGCTCATCTACCTGTTGCCCGAGTAAAAAACTCCATTGGCAAACATGACCACACTCAGTGCCCAGTAATACAGATTCAGTAATTTGGCCATTTTTGTTCTAATCTGAGTGTGTTGATAATAAACAGAGAACTTTCTAAACGTTTCAACTGCTCAGGTTTCAAT    GCGCTCTCAACAGAGAGCACACAATCTATCTTCATGGATCAAAGGTGCTCAATC                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CA766951             [            TTTTTTTTAAAGATAAATGAATTGAATTTTGGCCATGGGGGCCCTTTAACAAATCATCATCACAGTATGCACAAACCAATATATCATCCTCTCATCATGTTGTGTACTACATTCTAAAAATCAAAACAAACGGCTTAAGATCAGTCTGTTACAGAACGAGCTAATCTACCTGTTGCCCGAGTAGAAAACTCCATTGGCAAACATGACCACACTCAGTGCCCAGTAATACAGATTCAGTAATTCGGCCATTTTTGTTCTAATCTGAGTGTGTTGATAATAAACAGAGAACTTTCTAAACGTTTCAACTGCTCAGGTTTCAATGGTGGCGCTCTCAACAGAGAGCACACAATCTATCTTCATGGATCAAAGGTGCTCAATCTCGCCTTATCGTTTCCGCGACCTCCTGGGCGCTGCTTCCTCGTCACTCTCACTGTCATCGTCTCGGAGGGCACTTCTACC                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB674877             [                                       TTTGGCCATGGGGGCCCTTTAACAAATCATCATCACAGTATGCACAAACCAATATATCATCCTCTCATCATGTTGTGTACTACATTCTAAAAATCAAAACAAACGGCTTAAGATCAGTCTGTTACAGAACGAGCTCATCTACCTGTTGCCCGAGTAAAAAACTCCATTGGCAAACATGACCACACTCAGTGCCCAGTAATACAGATTCAGTAATTTGGCCATTTTTGTTCTAATCTGAGTGTGTTGATAATAAACAGAGAACTTTCTAAACGTTTCAACTGCTCAGGTTTCAAT    GCGCTCTCAACAGAGAGCACACAATCTATCTTCATGGATCAAAGGTGCTCAATCTCGCCTTATCGTTTCCGCGACCTCCTGGGCGCTGCTTCCTCGTCACTCTCACTGTCATCGTCTCGGAGGGCGCTTCTACCGTATCTGTCCCC AGACTGCGACCTGGCTCCTTCTGCTCCAGAATTCCCAGTGGCGTCATGACCCCTGCTTCCCTGATCTGAAGTTGTCTCATACCTGTCACCCCTCTCACCACCTGGCCTTCTTTGCTCCCGCTTCGTGCCACGGTTATTTGGTGGAGGTGGTGGGGGCATGAAGGGAGCCATACCAACGGGTCGATTTGGCCGTCCAGGCCCACCCATTCCCAAGCCTCCCATTAGCGGTCCACGACCAGGACCCATCATCATTTCTAGCCCCATAGGAAACATGCCCCCAGGTTGTGGGGGC]




>consensus_6353#0
TTCTTTTTTTTTTTTTTTTTAAAGATAAATGAATTGAATTTTGGCCATGGGGGCCCTTTA
ACAAATCATCATCACAGTATGCACAAACCAATATATCATCCTCTCATCATGTTGTGTACT
ACATTCTAAAAATCAAAACAAACGGCTTAAGATCAGTCTGTTACAGAACGAGCTAATCTA
CCTGTTGCCCGAGTAGAAAACTCCATTGGCAAACATGACCACACTCAGTGCCCAGTAATA
CAGATTCAGTAATTCGGCCATTTTTGTTCTAATCTGAGTGTGTTGATAATAAACAGAGAA
CTTTCTAAACGTTTCAACTGCTCAGGTTTCAATGGTGGCGCTCTCAACAGAGAGCACACA
ATCTATCTTCATGGATCAAAGGTGCTCAATCTCGCCTTATCGTTTCCGCGACCTCCTGGG
CGCTGCTTCCTCGTCACTCTCACTGTCATCGTCTCGGAGGGCACTTCTACCGTATCTGTC
CCCTTGTCTCGTCCTCTCTCCTTCTGCTCCAGAATTCCCAGTGGCGTCATGACCCCTGCT
TCCCTGATCTGAAGTTGTCTCATACCTGTCACCCCTCTCACCACCTGGCCTTCTTTGCTC
CCGCTTCGTGCCACGGTTATTTGGTGGAGGTGGTGGGGGCATGAAGGGAGCCATACCAAC
GGGTCGATTTGGCCGTCCAGGCCCACCCATTCCCAAGCCTCCCATTAGCGGTCCACGACC
AGGACCCATCATCATTTCTAGCCCCATAGGAAACATGCCCCCAGGTTGTGGGGGC

clustalw multiple alignements is not computed in this case