cluster # 6426

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Oryza sativa
cluster # 6426 cluster # 6426 Sequences # 4 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6426#0 length = 2805 sequences # 1

consensus_6426#1 length = 788 sequences # 3

consensusID : consensus_6426#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2805
fasta sequence

                              [GGCTTTCTCTTCTGGTTTCATATTGGTTCTAGAGAGATGGCTCTAAAGGTGTTCAATTGGCTGAATCGGAAGAAGCATTCTAATGTCGAGTATTGCACCATCAATGAGAACAAGGGTAAGGATACCAGGATATCTCTCTTTTATGTACCACATGTTTTGTTGTTCTCATGTTGTCAACTCTTGTTTCTTCTCTTCTATTTTTTTTCCTGATGGAGTAGCCATGGAAGAGAAGGAAGACTCTCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCTGCTGCTCCGTGATGTGCTTATTAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGTAAACTCACTCTGTCCTGAGTCCTGTATTGAACAAGATGAGCCCATCATCATGTGTGATGAGAAAGTGGAACAAGAGAAGTGCGAAGAAGAAAAGGCTGAGGCTAAACAGGACACACCAGTTACAGCACCAAGTGAACCGGCATCTGCTCTTGAGCCTGCCAAGATGCACTCATCATCGATGAAAGAAGACAACTTCATGTGCTTTGTGAAGGAGGAAATCCTAATGCATGGCATGGAAGTGGAAGATGTTCCTAACATCCAGGAACGACCACTTCTGATGTTAGAGAAGGTGGAGAAAGTGAGAACTACACTTGCCGATCTATTTGCTGCAGAAGCATTCTCATCAAGTGATGCAGAGGATAAGTGTTACCCGAAAATCGTCATTGTTGCTGGGGCATCCACTTCAAAGCCTACGTCGTGCATGGAGAAGATGCATCACAAGAAGCCAACAAAACCAACGTCAAAGCCGCTGAAGGCTACAAGAAAATTAAGTCGAGTATGGTTTTCTTCGTCTCTGCTTTATTTGTTAAGCCTTGTTACATTATATTTTACTAGTCTGGAATTTATTACACTTTGTTCCATGGTCAGTGCGCCACATCTTACACATATGTTTTACCATATAGCTACAACTGGAGTAAGCATTATGCATCTAGCCAGTCTTTAGTGGTAAATGATCACTGACCTGGAATGCACCTTTTTGGTTTTTGTCATCTGTAAAATAAGTAGGTCATGAGGAAGATGTTGGGGAAGAAGATCCACCCAGAGCAGCTCAATGGACGTAGCAATGCAGAGGGCCCTGTCACTGCATAATGCTAGGTTTGTGGACAAAAGTTTCCTTTCTCTATCTGGCAATTTATTACCTAGAGTTTTTTTAAAGCTGTCTGTTGAACTATACAGGGCTCAAGGCCCTTGTGTTTTGCATACGATTTTGTACCTTTCCAAATTTTCTTGATTTTTACTTGGATTCCATTGTTTGTAATAAAATTAGGTTAATATCTGAGGTAGTATTTGCATAGAATGGATACCTTCTACCAAAGTTATATTTGTTTGTGGGTCCTAGAGCTAGCATGACCCACGAATCACATTCAAGAATATAGTAATTCGTTTAGGCTACATTTCACTAGGAATAGAACATATGAATATTCTCAGGTTTAATAAGGCAGATGCAAAAAAGAACTGAATAGCACAGGAAAGTAATTTTTCCATTTCAAGCTTCTCACAGTCAAAAACAAGTAATGGTTCAAAAATTGAATATTCTATCACCTGTTGCCTCCATTTATGTGGAACTCACAAGAGGGTCTAAGTGCTGCTTGACACTCTGACCTGTATTTAAATAAAATGTTATCACCTATTGCCTCTGCTTATTATTGGGATCTCAAAACACAATCTATTACTGTGTATGCCTTGGCATTTTTTAAAATCTGAGCTGCCCCCTTATTCTTCACATTTTCTCAGAAAACCATATAAACTTTTAGATAAATGAAGCTTTTATTGATCTCAGACAATTACATCAAGTTGATAGAACCAAACTAAGAACACTTCTGGCCTCTGATAATGGAACTGCTGTTTGTTTAAGTAGAAAGAATGGTGTGTGTATTTTAACGGTTGGTGATTGGGAATTGGGATGCAGTGACCATGGAGACTGTGTTCTTCAGAATATTTTTAAGAAATAGTGTTTTCGGTGGATCCTATCATGGAACTGCCTATGGTGGAAAGAGCAATACGAGTTGAAACATATAGGGATTAGGAAGCATGGGTTTCGGACTAAAATGCATTCGTTCCTGCCATGATGCAAAGCTTCATTCGAAGCAAAATGAGCACATGCCATGGTACAGTGGCGTGCAACGAGCACTGCAATTGCACACGACGTGCATGTTCTGAAAAAGGCCAGTGGACACTAGACATGCAGCTAATCCTCTTTTGATGAATTCTATCATGAAACCAATGGATTCGTTGAAAATCTGAACAAATTGATGGATTTGGTCCCAGCTGTAGAAAGGTTGGCAAACTCTTCTCGCTCCTGTATTATTGTAGGCTGGAGCTATGATGGACCAAATCATCAGAAGCAAATTTCACCATATATAAGCATCTACTTTTATCTTTTTCTCTATTTTAAAATGTGATCATAGTGAAGTTATATACATTCTATCTGCTTAACGCTCCACATTATCCAAAAAAATGCATCACACTCCATATTGGGAACACGTTGGTGGTTCTGAACCAAAGTCGATCTCTTGATGCCAATTTTTTTTTTGAGCTGGTTGAGTAGTCGAACTGGGAACAATTACTGCTTGAGGCTACAAAATTTCTGGCCGACAATACGTCTTGATCAGGAACTGACTAAAGAAATTCCCTTTCACCTTTTGCGGGATTTGTTGGATCCATCCTCACGCTTCGGATTCCTTGCTCAAGAGAAACATCCATGCATATCGTCGACAGCGTTCGTTCAGTCCTCTTCCTTTTGTT]

[+] EMBL AK066042             [GGCTTTCTCTTCTGGTTTCATATTGGTTCTAGAGAGATGGCTCTAAAGGTGTTCAATTGGCTGAATCGGAAGAAGCATTCTAATGTCGAGTATTGCACCATCAATGAGAACAAGGGTAAGGATACCAGGATATCTCTCTTTTATGTACCACATGTTTTGTTGTTCTCATGTTGTCAACTCTTGTTTCTTCTCTTCTATTTTTTTTCCTGATGGAGTAGCCATGGAAGAGAAGGAAGACTCTCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCTGCTGCTCCGTGATGTGCTTATTAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGTAAACTCACTCTGTCCTGAGTCCTGTATTGAACAAGATGAGCCCATCATCATGTGTGATGAGAAAGTGGAACAAGAGAAGTGCGAAGAAGAAAAGGCTGAGGCTAAACAGGACACACCAGTTACAGCACCAAGTGAACCGGCATCTGCTCTTGAGCCTGCCAAGATGCACTCATCATCGATGAAAGAAGACAACTTCATGTGCTTTGTGAAGGAGGAAATCCTAATGCATGGCATGGAAGTGGAAGATGTTCCTAACATCCAGGAACGACCACTTCTGATGTTAGAGAAGGTGGAGAAAGTGAGAACTACACTTGCCGATCTATTTGCTGCAGAAGCATTCTCATCAAGTGATGCAGAGGATAAGTGTTACCCGAAAATCGTCATTGTTGCTGGGGCATCCACTTCAAAGCCTACGTCGTGCATGGAGAAGATGCATCACAAGAAGCCAACAAAACCAACGTCAAAGCCGCTGAAGGCTACAAGAAAATTAAGTCGAGTATGGTTTTCTTCGTCTCTGCTTTATTTGTTAAGCCTTGTTACATTATATTTTACTAGTCTGGAATTTATTACACTTTGTTCCATGGTCAGTGCGCCACATCTTACACATATGTTTTACCATATAGCTACAACTGGAGTAAGCATTATGCATCTAGCCAGTCTTTAGTGGTAAATGATCACTGACCTGGAATGCACCTTTTTGGTTTTTGTCATCTGTAAAATAAGTAGGTCATGAGGAAGATGTTGGGGAAGAAGATCCACCCAGAGCAGCTCAATGGACGTAGCAATGCAGAGGGCCCTGTCACTGCATAATGCTAGGTTTGTGGACAAAAGTTTCCTTTCTCTATCTGGCAATTTATTACCTAGAGTTTTTTTAAAGCTGTCTGTTGAACTATACAGGGCTCAAGGCCCTTGTGTTTTGCATACGATTTTGTACCTTTCCAAATTTTCTTGATTTTTACTTGGATTCCATTGTTTGTAATAAAATTAGGTTAATATCTGAGGTAGTATTTGCATAGAATGGATACCTTCTACCAAAGTTATATTTGTTTGTGGGTCCTAGAGCTAGCATGACCCACGAATCACATTCAAGAATATAGTAATTCGTTTAGGCTACATTTCACTAGGAATAGAACATATGAATATTCTCAGGTTTAATAAGGCAGATGCAAAAAAGAACTGAATAGCACAGGAAAGTAATTTTTCCATTTCAAGCTTCTCACAGTCAAAAACAAGTAATGGTTCAAAAATTGAATATTCTATCACCTGTTGCCTCCATTTATGTGGAACTCACAAGAGGGTCTAAGTGCTGCTTGACACTCTGACCTGTATTTAAATAAAATGTTATCACCTATTGCCTCTGCTTATTATTGGGATCTCAAAACACAATCTATTACTGTGTATGCCTTGGCATTTTTTAAAATCTGAGCTGCCCCCTTATTCTTCACATTTTCTCAGAAAACCATATAAACTTTTAGATAAATGAAGCTTTTATTGATCTCAGACAATTACATCAAGTTGATAGAACCAAACTAAGAACACTTCTGGCCTCTGATAATGGAACTGCTGTTTGTTTAAGTAGAAAGAATGGTGTGTGTATTTTAACGGTTGGTGATTGGGAATTGGGATGCAGTGACCATGGAGACTGTGTTCTTCAGAATATTTTTAAGAAATAGTGTTTTCGGTGGATCCTATCATGGAACTGCCTATGGTGGAAAGAGCAATACGAGTTGAAACATATAGGGATTAGGAAGCATGGGTTTCGGACTAAAATGCATTCGTTCCTGCCATGATGCAAAGCTTCATTCGAAGCAAAATGAGCACATGCCATGGTACAGTGGCGTGCAACGAGCACTGCAATTGCACACGACGTGCATGTTCTGAAAAAGGCCAGTGGACACTAGACATGCAGCTAATCCTCTTTTGATGAATTCTATCATGAAACCAATGGATTCGTTGAAAATCTGAACAAATTGATGGATTTGGTCCCAGCTGTAGAAAGGTTGGCAAACTCTTCTCGCTCCTGTATTATTGTAGGCTGGAGCTATGATGGACCAAATCATCAGAAGCAAATTTCACCATATATAAGCATCTACTTTTATCTTTTTCTCTATTTTAAAATGTGATCATAGTGAAGTTATATACATTCTATCTGCTTAACGCTCCACATTATCCAAAAAAATGCATCACACTCCATATTGGGAACACGTTGGTGGTTCTGAACCAAAGTCGATCTCTTGATGCCAATTTTTTTTTTGAGCTGGTTGAGTAGTCGAACTGGGAACAATTACTGCTTGAGGCTACAAAATTTCTGGCCGACAATACGTCTTGATCAGGAACTGACTAAAGAAATTCCCTTTCACCTTTTGCGGGATTTGTTGGATCCATCCTCACGCTTCGGATTCCTTGCTCAAGAGAAACATCCATGCATATCGTCGACAGCGTTCGTTCAGTCCTCTTCCTTTTGTT]




>consensus_6426#0
GGCTTTCTCTTCTGGTTTCATATTGGTTCTAGAGAGATGGCTCTAAAGGTGTTCAATTGG
CTGAATCGGAAGAAGCATTCTAATGTCGAGTATTGCACCATCAATGAGAACAAGGGTAAG
GATACCAGGATATCTCTCTTTTATGTACCACATGTTTTGTTGTTCTCATGTTGTCAACTC
TTGTTTCTTCTCTTCTATTTTTTTTCCTGATGGAGTAGCCATGGAAGAGAAGGAAGACTC
TCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCTGCTGCTCCGTGATGTGCTTAT
TAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGTAAACTCACTCTGTCCTGAGTC
CTGTATTGAACAAGATGAGCCCATCATCATGTGTGATGAGAAAGTGGAACAAGAGAAGTG
CGAAGAAGAAAAGGCTGAGGCTAAACAGGACACACCAGTTACAGCACCAAGTGAACCGGC
ATCTGCTCTTGAGCCTGCCAAGATGCACTCATCATCGATGAAAGAAGACAACTTCATGTG
CTTTGTGAAGGAGGAAATCCTAATGCATGGCATGGAAGTGGAAGATGTTCCTAACATCCA
GGAACGACCACTTCTGATGTTAGAGAAGGTGGAGAAAGTGAGAACTACACTTGCCGATCT
ATTTGCTGCAGAAGCATTCTCATCAAGTGATGCAGAGGATAAGTGTTACCCGAAAATCGT
CATTGTTGCTGGGGCATCCACTTCAAAGCCTACGTCGTGCATGGAGAAGATGCATCACAA
GAAGCCAACAAAACCAACGTCAAAGCCGCTGAAGGCTACAAGAAAATTAAGTCGAGTATG
GTTTTCTTCGTCTCTGCTTTATTTGTTAAGCCTTGTTACATTATATTTTACTAGTCTGGA
ATTTATTACACTTTGTTCCATGGTCAGTGCGCCACATCTTACACATATGTTTTACCATAT
AGCTACAACTGGAGTAAGCATTATGCATCTAGCCAGTCTTTAGTGGTAAATGATCACTGA
CCTGGAATGCACCTTTTTGGTTTTTGTCATCTGTAAAATAAGTAGGTCATGAGGAAGATG
TTGGGGAAGAAGATCCACCCAGAGCAGCTCAATGGACGTAGCAATGCAGAGGGCCCTGTC
ACTGCATAATGCTAGGTTTGTGGACAAAAGTTTCCTTTCTCTATCTGGCAATTTATTACC
TAGAGTTTTTTTAAAGCTGTCTGTTGAACTATACAGGGCTCAAGGCCCTTGTGTTTTGCA
TACGATTTTGTACCTTTCCAAATTTTCTTGATTTTTACTTGGATTCCATTGTTTGTAATA
AAATTAGGTTAATATCTGAGGTAGTATTTGCATAGAATGGATACCTTCTACCAAAGTTAT
ATTTGTTTGTGGGTCCTAGAGCTAGCATGACCCACGAATCACATTCAAGAATATAGTAAT
TCGTTTAGGCTACATTTCACTAGGAATAGAACATATGAATATTCTCAGGTTTAATAAGGC
AGATGCAAAAAAGAACTGAATAGCACAGGAAAGTAATTTTTCCATTTCAAGCTTCTCACA
GTCAAAAACAAGTAATGGTTCAAAAATTGAATATTCTATCACCTGTTGCCTCCATTTATG
TGGAACTCACAAGAGGGTCTAAGTGCTGCTTGACACTCTGACCTGTATTTAAATAAAATG
TTATCACCTATTGCCTCTGCTTATTATTGGGATCTCAAAACACAATCTATTACTGTGTAT
GCCTTGGCATTTTTTAAAATCTGAGCTGCCCCCTTATTCTTCACATTTTCTCAGAAAACC
ATATAAACTTTTAGATAAATGAAGCTTTTATTGATCTCAGACAATTACATCAAGTTGATA
GAACCAAACTAAGAACACTTCTGGCCTCTGATAATGGAACTGCTGTTTGTTTAAGTAGAA
AGAATGGTGTGTGTATTTTAACGGTTGGTGATTGGGAATTGGGATGCAGTGACCATGGAG
ACTGTGTTCTTCAGAATATTTTTAAGAAATAGTGTTTTCGGTGGATCCTATCATGGAACT
GCCTATGGTGGAAAGAGCAATACGAGTTGAAACATATAGGGATTAGGAAGCATGGGTTTC
GGACTAAAATGCATTCGTTCCTGCCATGATGCAAAGCTTCATTCGAAGCAAAATGAGCAC
ATGCCATGGTACAGTGGCGTGCAACGAGCACTGCAATTGCACACGACGTGCATGTTCTGA
AAAAGGCCAGTGGACACTAGACATGCAGCTAATCCTCTTTTGATGAATTCTATCATGAAA
CCAATGGATTCGTTGAAAATCTGAACAAATTGATGGATTTGGTCCCAGCTGTAGAAAGGT
TGGCAAACTCTTCTCGCTCCTGTATTATTGTAGGCTGGAGCTATGATGGACCAAATCATC
AGAAGCAAATTTCACCATATATAAGCATCTACTTTTATCTTTTTCTCTATTTTAAAATGT
GATCATAGTGAAGTTATATACATTCTATCTGCTTAACGCTCCACATTATCCAAAAAAATG
CATCACACTCCATATTGGGAACACGTTGGTGGTTCTGAACCAAAGTCGATCTCTTGATGC
CAATTTTTTTTTTGAGCTGGTTGAGTAGTCGAACTGGGAACAATTACTGCTTGAGGCTAC
AAAATTTCTGGCCGACAATACGTCTTGATCAGGAACTGACTAAAGAAATTCCCTTTCACC
TTTTGCGGGATTTGTTGGATCCATCCTCACGCTTCGGATTCCTTGCTCAAGAGAAACATC
CATGCATATCGTCGACAGCGTTCGTTCAGTCCTCTTCCTTTTGTT

consensusID : consensus_6426#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 788
fasta sequence

                              [TGTCTGGCTTTCTCTTCTGGTTTATATTGGTTCTAGAGAGATGGCTCTAAAGGTGTTCAATTGGCTGAATCGGAAGAAGCATTCTAATGTCGAGTATTGCACCATCAATGAGAACAAGGCCATGGAAGAGAAGGAAGACTCTCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCTGCTGCTCCGTGATGTGCTTATTAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGTAAACTCACTCTGTCCTGAGTCCTGTATTGAACAAGATGAGCCCATCATCATGTGTGATGAGAAAGTGGAACAAGAGAAGTGCGAAGAAGAAAAGGCTGAGGCTAAACAGGACACACCAGTTACAGCACCAAGTGAACCGGCATCTGCTCTTGAGCCTGCCAAGATGCACTCATCATCGATGAAAGAAGACAACTTCATGTGCTTTGTGAAGGAGGAAATCCTAATGCATGGCATTGGAAGTGGAAGATGTTCCTAACATCCAGGAACGACCACTTCTGATGTTAGAGAAGGTGGAGAAAGTGAGAACTACACTTGCCGATCTATTTGCTGCAGAAGCATCCTCATCAAGTGATGCAGAGGATAAGTGTTACCCGAAAATCGTCATTGTTGCTGGGGCATCCACTTCAAAGCCTACGTCGTGCATGGAGAAGATGCATCACAAGAAGCCAACAAAACCAACGTCAAAGCCGCTGAANGCTCGAAGAAAAATTAAGTCGAGTCATGAGGAANATGTTGGGGAAAGAAGATCCACCCAGAGCAGCTCAATG]

[+] EMBL CA766687             [TGTCTGGCTTTCTCTTCTGGTTTATATTGGTTCTAGAGAGATGGCTCTAAAGGTGTTCAATTGGCTGAATCGGAAGAAGCATTCTAATGTCGAGTATTGCACCATCAATGAGAACAAGGCCATGGAAGAGAAGGAAGACTCTCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCTGCTGCTCCGTGATGTGCTTATTAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGTAAACTCACTCTGTCCTGAGTCCTGTATTGAACAAGATGAGCCCATCATCATGTGTGATGAGAAAGTGGAACAAGAGAAGTGCGAAGAAGAAAAGGCTGAGGCTAAACAGGACACACCAGTTACAGCACCAAGTGAACCGGCATCTGCTCTTGAGCCTGCCAAGATGCACTCATCATCGATGAAAGAAGACAACTTCATGTGCTTTGTGAAGGAGGAAATCCTAATGCATGGCATTGGAAGTGGAAGATGTTCCTAACATCCAGGAACGACCACTTCTGATGTTAGAGAAGGTGGAGAAAGTGAGAACTACACTTGCCGATCTATTTGCTGCAGAAGCATCCTCATCAAGTGATGCAGAGGATAAGTGTTACCCGAAAATCGTCATTGTTGCTGGGGCATCCACTTCAAAGCCTACGTCGTGCATGGAGAAGATGCATCACAAGAAGCCAACAAAACCAACGTCAAAGCCGCTGAANGCTCGAAGAAAAATTAAGTCGAGTCATGAGGAANATGTTGGGGAAAGAAGATCCACCCAGAGCAGCTCAATG]
[+] EMBL CA999319             [                                                     TGTTCAATTGGCTGAATCGGAAGAAGCATTCTAATGTCGAGTATTGCACCATCAATGAGAACAAGGCCATGGAAGAGAAGGAAGACTCTCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCTGCTGCTCCGTGATGTGCTTATTAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGTAAACTCACTCTGTCCTGAGTCCTGTATTGAACAAGATGAGCCCATCATCATGTGTGATGAGAAAGTGGAACAAGAGAAGTGCGAAGAAGAAAAGGCTGAGGCTAAACAGGACACACCAGTTACAGCACCAAGTGAACCGGCATCTGCTCTTGAGCCTGCCAAGATGCACTCATCATCGATGAAAGAAGACAACTTCATGTGCTTTGTGAAGGAGGAAATCCTAATGCATGGCA TGGAAGTGGAAGATGTTCCTAACATCCAGGAACGACCACTTCTGATGTTAGAGAAGGTGGAGAAAGTGAGAACTACACTTGCCGATCTATTTGCTGCAGAAGCATTCTCATCAAGTGATGCAGAGGATAAGTGTTACCCGAAAATCGTCATTGTTGCTGGGGCATCCACTTCAAAGCCTACGTCGTGCATGGAGAAGATGCATCACAAGAAGCCA                                                                                                   ]
[+] EMBL CA999808             [                                                     TGTTCAATTGGCTGAATCGGAAGAAGCATTCTAATGTCGAGTATTGCACCATCAATGAGAACAAGGCCATGGAAGAGAAGGAAGACTCTCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCTGCTGCTCCGTGATGTGCTTATTAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGTAAACTCACTCTGTCCTGAGTCCTGTATTGAACAAGATGAGCCCATCATCATGTGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]




>consensus_6426#1
TGTCTGGCTTTCTCTTCTGGTTTATATTGGTTCTAGAGAGATGGCTCTAAAGGTGTTCAA
TTGGCTGAATCGGAAGAAGCATTCTAATGTCGAGTATTGCACCATCAATGAGAACAAGGC
CATGGAAGAGAAGGAAGACTCTCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCT
GCTGCTCCGTGATGTGCTTATTAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGT
AAACTCACTCTGTCCTGAGTCCTGTATTGAACAAGATGAGCCCATCATCATGTGTGATGA
GAAAGTGGAACAAGAGAAGTGCGAAGAAGAAAAGGCTGAGGCTAAACAGGACACACCAGT
TACAGCACCAAGTGAACCGGCATCTGCTCTTGAGCCTGCCAAGATGCACTCATCATCGAT
GAAAGAAGACAACTTCATGTGCTTTGTGAAGGAGGAAATCCTAATGCATGGCATTGGAAG
TGGAAGATGTTCCTAACATCCAGGAACGACCACTTCTGATGTTAGAGAAGGTGGAGAAAG
TGAGAACTACACTTGCCGATCTATTTGCTGCAGAAGCATCCTCATCAAGTGATGCAGAGG
ATAAGTGTTACCCGAAAATCGTCATTGTTGCTGGGGCATCCACTTCAAAGCCTACGTCGT
GCATGGAGAAGATGCATCACAAGAAGCCAACAAAACCAACGTCAAAGCCGCTGAANGCTC
GAAGAAAAATTAAGTCGAGTCATGAGGAANATGTTGGGGAAAGAAGATCCACCCAGAGCA
GCTCAATG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6426#0      -----GGCTTTCTCTTCTGGTTTCATATTGGTTCTAGAGAGATGGCTCTAAAGGTGTTCA 55
consensus_6426#1      TGTCTGGCTTTCTCTTCTGGTTT-ATATTGGTTCTAGAGAGATGGCTCTAAAGGTGTTCA 59
                           ****************** ************************************

consensus_6426#0      ATTGGCTGAATCGGAAGAAGCATTCTAATGTCGAGTATTGCACCATCAATGAGAACAAGG 115
consensus_6426#1      ATTGGCTGAATCGGAAGAAGCATTCTAATGTCGAGTATTGCACCATCAATGAGAACAAGG 119
                      ************************************************************

consensus_6426#0      GTAAGGATACCAGGATATCTCTCTTTTATGTACCACATGTTTTGTTGTTCTCATGTTGTC 175
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      AACTCTTGTTTCTTCTCTTCTATTTTTTTTCCTGATGGAGTAGCCATGGAAGAGAAGGAA 235
consensus_6426#1      -------------------------------------------CCATGGAAGAGAAGGAA 136
                                                                 *****************

consensus_6426#0      GACTCTCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCTGCTGCTCCGTGATGTG 295
consensus_6426#1      GACTCTCTGCGTGCAAGTGTGACTGAGCAAGACACTGAGGCCCTGCTGCTCCGTGATGTG 196
                      ************************************************************

consensus_6426#0      CTTATTAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGTAAACTCACTCTGTCCT 355
consensus_6426#1      CTTATTAATGGTATACTTGCAATTGGCACGCTGGGCCACAATGTAAACTCACTCTGTCCT 256
                      ************************************************************

consensus_6426#0      GAGTCCTGTATTGAACAAGATGAGCCCATCATCATGTGTGATGAGAAAGTGGAACAAGAG 415
consensus_6426#1      GAGTCCTGTATTGAACAAGATGAGCCCATCATCATGTGTGATGAGAAAGTGGAACAAGAG 316
                      ************************************************************

consensus_6426#0      AAGTGCGAAGAAGAAAAGGCTGAGGCTAAACAGGACACACCAGTTACAGCACCAAGTGAA 475
consensus_6426#1      AAGTGCGAAGAAGAAAAGGCTGAGGCTAAACAGGACACACCAGTTACAGCACCAAGTGAA 376
                      ************************************************************

consensus_6426#0      CCGGCATCTGCTCTTGAGCCTGCCAAGATGCACTCATCATCGATGAAAGAAGACAACTTC 535
consensus_6426#1      CCGGCATCTGCTCTTGAGCCTGCCAAGATGCACTCATCATCGATGAAAGAAGACAACTTC 436
                      ************************************************************

consensus_6426#0      ATGTGCTTTGTGAAGGAGGAAATCCTAATGCATGGCAT-GGAAGTGGAAGATGTTCCTAA 594
consensus_6426#1      ATGTGCTTTGTGAAGGAGGAAATCCTAATGCATGGCATTGGAAGTGGAAGATGTTCCTAA 496
                      ************************************** *********************

consensus_6426#0      CATCCAGGAACGACCACTTCTGATGTTAGAGAAGGTGGAGAAAGTGAGAACTACACTTGC 654
consensus_6426#1      CATCCAGGAACGACCACTTCTGATGTTAGAGAAGGTGGAGAAAGTGAGAACTACACTTGC 556
                      ************************************************************

consensus_6426#0      CGATCTATTTGCTGCAGAAGCATTCTCATCAAGTGATGCAGAGGATAAGTGTTACCCGAA 714
consensus_6426#1      CGATCTATTTGCTGCAGAAGCATCCTCATCAAGTGATGCAGAGGATAAGTGTTACCCGAA 616
                      *********************** ************************************

consensus_6426#0      AATCGTCATTGTTGCTGGGGCATCCACTTCAAAGCCTACGTCGTGCATGGAGAAGATGCA 774
consensus_6426#1      AATCGTCATTGTTGCTGGGGCATCCACTTCAAAGCCTACGTCGTGCATGGAGAAGATGCA 676
                      ************************************************************

consensus_6426#0      TCACAAGAAGCCAACAAAACCAACGTCAAAGCCGCTGAAGGCTACAAGAAAA-TTAAGTC 833
consensus_6426#1      TCACAAGAAGCCAACAAAACCAACGTCAAAGCCGCTGAANGCTCGAAGAAAAATTAAGTC 736
                      *************************************** ***  ******* *******

consensus_6426#0      GAGTATGGTTTTCTTCGTCTCTGCTTTATTTGTTAAGCCTTGTTACATTATATTTTACTA 893
consensus_6426#1      GAGTCATGAGGAANATGTTGGGGAAAGAAGATCCACCCAGAGCAGCTCAATG-------- 788
                      ****   *        **    *    *      *  *   *   *   **         

consensus_6426#0      GTCTGGAATTTATTACACTTTGTTCCATGGTCAGTGCGCCACATCTTACACATATGTTTT 953
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      ACCATATAGCTACAACTGGAGTAAGCATTATGCATCTAGCCAGTCTTTAGTGGTAAATGA 1013
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      TCACTGACCTGGAATGCACCTTTTTGGTTTTTGTCATCTGTAAAATAAGTAGGTCATGAG 1073
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      GAAGATGTTGGGGAAGAAGATCCACCCAGAGCAGCTCAATGGACGTAGCAATGCAGAGGG 1133
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      CCCTGTCACTGCATAATGCTAGGTTTGTGGACAAAAGTTTCCTTTCTCTATCTGGCAATT 1193
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      TATTACCTAGAGTTTTTTTAAAGCTGTCTGTTGAACTATACAGGGCTCAAGGCCCTTGTG 1253
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      TTTTGCATACGATTTTGTACCTTTCCAAATTTTCTTGATTTTTACTTGGATTCCATTGTT 1313
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      TGTAATAAAATTAGGTTAATATCTGAGGTAGTATTTGCATAGAATGGATACCTTCTACCA 1373
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      AAGTTATATTTGTTTGTGGGTCCTAGAGCTAGCATGACCCACGAATCACATTCAAGAATA 1433
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      TAGTAATTCGTTTAGGCTACATTTCACTAGGAATAGAACATATGAATATTCTCAGGTTTA 1493
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      ATAAGGCAGATGCAAAAAAGAACTGAATAGCACAGGAAAGTAATTTTTCCATTTCAAGCT 1553
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      TCTCACAGTCAAAAACAAGTAATGGTTCAAAAATTGAATATTCTATCACCTGTTGCCTCC 1613
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      ATTTATGTGGAACTCACAAGAGGGTCTAAGTGCTGCTTGACACTCTGACCTGTATTTAAA 1673
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      TAAAATGTTATCACCTATTGCCTCTGCTTATTATTGGGATCTCAAAACACAATCTATTAC 1733
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      TGTGTATGCCTTGGCATTTTTTAAAATCTGAGCTGCCCCCTTATTCTTCACATTTTCTCA 1793
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      GAAAACCATATAAACTTTTAGATAAATGAAGCTTTTATTGATCTCAGACAATTACATCAA 1853
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      GTTGATAGAACCAAACTAAGAACACTTCTGGCCTCTGATAATGGAACTGCTGTTTGTTTA 1913
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      AGTAGAAAGAATGGTGTGTGTATTTTAACGGTTGGTGATTGGGAATTGGGATGCAGTGAC 1973
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      CATGGAGACTGTGTTCTTCAGAATATTTTTAAGAAATAGTGTTTTCGGTGGATCCTATCA 2033
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      TGGAACTGCCTATGGTGGAAAGAGCAATACGAGTTGAAACATATAGGGATTAGGAAGCAT 2093
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      GGGTTTCGGACTAAAATGCATTCGTTCCTGCCATGATGCAAAGCTTCATTCGAAGCAAAA 2153
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      TGAGCACATGCCATGGTACAGTGGCGTGCAACGAGCACTGCAATTGCACACGACGTGCAT 2213
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      GTTCTGAAAAAGGCCAGTGGACACTAGACATGCAGCTAATCCTCTTTTGATGAATTCTAT 2273
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      CATGAAACCAATGGATTCGTTGAAAATCTGAACAAATTGATGGATTTGGTCCCAGCTGTA 2333
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      GAAAGGTTGGCAAACTCTTCTCGCTCCTGTATTATTGTAGGCTGGAGCTATGATGGACCA 2393
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      AATCATCAGAAGCAAATTTCACCATATATAAGCATCTACTTTTATCTTTTTCTCTATTTT 2453
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      AAAATGTGATCATAGTGAAGTTATATACATTCTATCTGCTTAACGCTCCACATTATCCAA 2513
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      AAAAATGCATCACACTCCATATTGGGAACACGTTGGTGGTTCTGAACCAAAGTCGATCTC 2573
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      TTGATGCCAATTTTTTTTTTGAGCTGGTTGAGTAGTCGAACTGGGAACAATTACTGCTTG 2633
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      AGGCTACAAAATTTCTGGCCGACAATACGTCTTGATCAGGAACTGACTAAAGAAATTCCC 2693
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      TTTCACCTTTTGCGGGATTTGTTGGATCCATCCTCACGCTTCGGATTCCTTGCTCAAGAG 2753
consensus_6426#1      ------------------------------------------------------------
                                                                                  

consensus_6426#0      AAACATCCATGCATATCGTCGACAGCGTTCGTTCAGTCCTCTTCCTTTTGTT 2805
consensus_6426#1      ----------------------------------------------------