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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_6552#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2845 fasta sequence
[TCTGCTGCTTCCGCGCAGAAGAAGACCAATTCCTCGCGCCACCTCCACCACCGCCTCCGCCGCCGCCGTGGACGCCGGGATGGATCTGCGGCGGCCGACGACGCGCTCCTCGTCGGGGGGAGTGGAGCCGAGGTACCGGCAGGTCGGCTTCGTCACCACCACTGCCGAGCCCGCCGCGGCGGCGGCGTCGTCTTCCTCCTCCCCGCGTGGCTCCGACGTCTACCCGGGGTCGCTCTCCCCCGTGATGATCCCGCCCCCGCGCATCCCCGACCACCTCACCGCCCTTTCTCCCGCCCCCGTCTCGCTCCTGCCCTCCTCCCCGCCGCCGCCTTCGTCATCCCGCCTCGACGCCGCAGAATCCGACCTCGACGACGACGACGACGACGACGTTGACGTCTCGTGGGCGCGGCCACCTCCACCTGCCCTTCTCGAATCAAAGGAAGGTCTTCCTGATACACAGAATGAAGGTGCTCCAGCTCCAGCCCCAGTTCAACAAAAACAGAAGCTTTCTAAAGCAGAGAGACGTGCTATTCAGGAAGCTCAGCGTGCAGCCAAAGCTTCTGCAAAGGAGGCAGGGTTATCAAGAAAATCTGTAGCCACAGTTTCTACTTCTAATGCTGCAATGTCAAAACAACTCAAAACTGTAAAGACACCTCCCAAGAAAGATCTGCCCCAACTTACACCTCCAGTTGCTTCTGAAAAGAAGACTAGTGAGCACCCTCCTGACAGAGATAGAAAGAAAGATGTTCCTCCCCCTCGTATGCAGTTTGATAATGTACATCGGGTGGAGAAAACAAAGAAGCATTCACTGGTCAACCAAGTAGAAGCACAAAACAGAGTCGAATTGTTCAGGCATCTGCCTCAATATGTACATGGAACTCAGCTTCCTGACCTCGAGTCAAAATTTTTTCATCTTGATCTAATGCATCCTTCTGTCTACAAGGTTGGACTTCAATTTTTGTCTGGTGTTATATCAGGTGGCAATGCTTGTTGCGTAGCAATGCTTCTTGCTTTCAGAGAGGCCATAAAAGATTACTCTACACCTTCCACCAAAACTCTCAACCGAGATCTTACTGCTAAAATCAGTAGCTACGTGTCATTTCTCATCGAGTGCAAGCCTCTTTCAATCAGCATGGGCAATGCTATTAGGTTTTTGAAGAACAGAATTGCCAAGCTATTGCTTACATTGTCTGAGTCAGAAGCTAAAGCTAGCCTACAGTCTGACATTGATCGGTTTATAAATGAGAAGATAATAATTGCAGACCATGTCATTGTTAGCCATGCAATAGCCAAAGTCAGAGATGATGATGTATTACTGACATACGCATCATCCTCTGTTGTTGAAATGATTTTTGATCATGCTAATGAGCTTGGAAAGAAGTTTCGTGTTGTTGTGGTAGATTCTCGTCCGAACAACGAGGGACAAGCACTATTGCACAGATTAGTTGCAAAGGGCATCAGTTGCACATATACGCACATTAATGCCATCTCATACATCATGCATGAGGTCACAAGGGTTTTTTTGGGTGCCTCTTCGATATTGTCAAATGGAGCAGTTTACTCCAGCGTTGGGACAGCAGCTGTAGCAATGGTTGCTCATGCCTTTGGAGTGCCTGTTTTAGTGTGCTGTGAGGCGTATAAATTGCATGAGAGGGTTCAACTTGATTCTATATGCTCTAATGAACTTGGTGATCCAGATGTTATTTCAAGAGTTCCTGAGAGGGAAGATTTGTGCCACCTTAAAAACTGTACTTATAATGAAAATCTACAACTTCTGAATCTTAAGTATGACACTATGCCTTCCGACTATGTTTCTATGATCATAACAGAATATGGAATGCTCCCACCTACTAGTGTGCCAGTCATTGTGAGAGAGTACCGCAGGGAGCACATATGGATATAGAACGAATGATATTTTCCTTGATGATTTAATGAGTTGGATTTTTAATATGAGGTACTGTCTATCAGCATCATCGTTTGAGTTGTGTGGTCACCCTTGGTCCAATGCGCACATGAACGCTAGTCCTGCCACCAGCAAGGGATGTTCATCAGTAGTCATTTGAACAGCTTGTTGTCAGTCTACAAGAATGGACCCTACAAATAAATCATGCATCTGAGTTAGATCTATGTCACTTTGGTCATTGAAAGCTCATCAAATCAAGGGCTCAAGTTTTAAGTGGCACCAGGTGGTGGATGGCCTGGTGAATTACTGTTGCTCCACACTCGGTGGATCATTACTGCGGACCTAATGAGTTCTCAGTACACACTAATGGGCATCTTTTGGTGGGGTTCATTGCTTTCCTTTAAGCCTGCTAATGCTACTGCCTATTTTTCAGCTAGCTCAGACCTGCCCCAACATTGTTGTTGCTGCCTATATTTATGCTGATCAAGACCTGTTTACAGCGACGGTCCCTGGCAAGGCACCAGTTGATCAACTGTCTGAAAACGTGATGGCAGATTGAATTGCTCAGCGTAAGAGTGCAGTAGGTACTGTAGCAGGTCTGGGTTGTGTTTTGGCTTGGTGTTGGCTTGCTCAGACAGGATCTTCAGCTGTATCAGCATGAATAGACGACGACATGATTGTTTTGGGGAGTTTTTCACCGGCTTGCACATATATTAATCTCCCACGCTTGTCCAGTTGGGCAACTATCATTGTCAATTCAAGGTCATATTGGTGTCCATGTCTGCCAAAGTTCTTGGGTACAAGGACTGCCACAGTTCTGTTCCTGGCTGCTACGACAGGCCTTGTTTAGTGGAGAAATTGTGGATCAATTCGTCGCCTGATAGCTGTAAATCCTAAAACTCCTGTAGTGCGGAAAAATAAGAGAAATCCTCAGAAAGTGAC]
[+] EMBL AK101044 [TCTGCTGCTTCCGCGCAGAAGAAGACCAATTCCTCGCGCCACCTCCACCACCGCCTCCGCCGCCGCCGTGGACGCCGGGATGGATCTGCGGCGGCCGACGACGCGCTCCTCGTCGGGGGGAGTGGAGCCGAGGTACCGGCAGGTCGGCTTCGTCACCACCACTGCCGAGCCCGCCGCGGCGGCGGCGTCGTCTTCCTCCTCCCCGCGTGGCTCCGACGTCTACCCGGGGTCGCTCTCCCCCGTGATGATCCCGCCCCCGCGCATCCCCGACCACCTCACCGCCCTTTCTCCCGCCCCCGTCTCGCTCCTGCCCTCCTCCCCGCCGCCGCCTTCGTCATCCCGCCTCGACGCCGCAGAATCCGACCTCGACGACGACGACGACGACGACGTTGACGTCTCGTGGGCGCGGCCACCTCCACCTGCCCTTCTCGAATCAAAGGAAGGTCTTCCTGATACACAGAATGAAGGTGCTCCAGCTCCAGCCCCAGTTCAACAAAAACAGAAGCTTTCTAAAGCAGAGAGACGTGCTATTCAGGAAGCTCAGCGTGCAGCCAAAGCTTCTGCAAAGGAGGCAGGGTTATCAAGAAAATCTGTAGCCACAGTTTCTACTTCTAATGCTGCAATGTCAAAACAACTCAAAACTGTAAAGACACCTCCCAAGAAAGATCTGCCCCAACTTACACCTCCAGTTGCTTCTGAAAAGAAGACTAGTGAGCACCCTCCTGACAGAGATAGAAAGAAAGATGTTCCTCCCCCTCGTATGCAGTTTGATAATGTACATCGGGTGGAGAAAACAAAGAAGCATTCACTGGTCAACCAAGTAGAAGCACAAAACAGAGTCGAATTGTTCAGGCATCTGCCTCAATATGTACATGGAACTCAGCTTCCTGACCTCGAGTCAAAATTTTTTCATCTTGATCTAATGCATCCTTCTGTCTACAAGGTTGGACTTCAATTTTTGTCTGGTGTTATATCAGGTGGCAATGCTTGTTGCGTAGCAATGCTTCTTGCTTTCAGAGAGGCCATAAAAGATTACTCTACACCTTCCACCAAAACTCTCAACCGAGATCTTACTGCTAAAATCAGTAGCTACGTGTCATTTCTCATCGAGTGCAAGCCTCTTTCAATCAGCATGGGCAATGCTATTAGGTTTTTGAAGAACAGAATTGCCAAGCTATTGCTTACATTGTCTGAGTCAGAAGCTAAAGCTAGCCTACAGTCTGACATTGATCGGTTTATAAATGAGAAGATAATAATTGCAGACCATGTCATTGTTAGCCATGCAATAGCCAAAGTCAGAGATGATGATGTATTACTGACATACGCATCATCCTCTGTTGTTGAAATGATTTTTGATCATGCTAATGAGCTTGGAAAGAAGTTTCGTGTTGTTGTGGTAGATTCTCGTCCGAACAACGAGGGACAAGCACTATTGCACAGATTAGTTGCAAAGGGCATCAGTTGCACATATACGCACATTAATGCCATCTCATACATCATGCATGAGGTCACAAGGGTTTTTTTGGGTGCCTCTTCGATATTGTCAAATGGAGCAGTTTACTCCAGCGTTGGGACAGCAGCTGTAGCAATGGTTGCTCATGCCTTTGGAGTGCCTGTTTTAGTGTGCTGTGAGGCGTATAAATTGCATGAGAGGGTTCAACTTGATTCTATATGCTCTAATGAACTTGGTGATCCAGATGTTATTTCAAGAGTTCCTGAGAGGGAAGATTTGTGCCACCTTAAAAACTGTACTTATAATGAAAATCTACAACTTCTGAATCTTAAGTATGACACTATGCCTTCCGACTATGTTTCTATGATCATAACAGAATATGGAATGCTCCCACCTACTAGTGTGCCAGTCATTGTGAGAGAGTACCGCAGGGAGCACATATGGATATAGAACGAATGATATTTTCCTTGATGATTTAATGAGTTGGATTTTTAATATGAGGTACTGTCTATCAGCATCATCGTTTGAGTTGTGTGGTCACCCTTGGTCCAATGCGCACATGAACGCTAGTCCTGCCACCAGCAAGGGATGTTCATCAGTAGTCATTTGAACAGCTTGTTGTCAGTCTACAAGAATGGACCCTACAAATAAATCATGCATCTGAGTTAGATCTATGTCACTTTGGTCATTGAAAGCTCATCAAATCAAGGGCTCAAGTTTTAAGTGGCACCAGGTGGTGGATGGCCTGGTGAATTACTGTTGCTCCACACTCGGTGGATCATTACTGCGGACCTAATGAGTTCTCAGTACACACTAATGGGCATCTTTTGGTGGGGTTCATTGCTTTCCTTTAAGCCTGCTAATGCTACTGCCTATTTTTCAGCTAGCTCAGACCTGCCCCAACATTGTTGTTGCTGCCTATATTTATGCTGATCAAGACCTGTTTACAGCGACGGTCCCTGGCAAGGCACCAGTTGATCAACTGTCTGAAAACGTGATGGCAGATTGAATTGCTCAGCGTAAGAGTGCAGTAGGTACTGTAGCAGGTCTGGGTTGTGTTTTGGCTTGGTGTTGGCTTGCTCAGACAGGATCTTCAGCTGTATCAGCATGAATAGACGACGACATGATTGTTTTGGGGAGTTTTTCACCGGCTTGCACATATATTAATCTCCCACGCTTGTCCAGTTGGGCAACTATCATTGTCAATTCAAGGTCATATTGGTGTCCATGTCTGCCAAAGTTCTTGGGTACAAGGACTGCCACAGTTCTGTTCCTGGCTGCTACGACAGGCCTTGTTTAGTGGAGAAATTGTGGATCAATTCGTCGCCTGATAGCTGTAAATCCTAAAACTCCTGTAGTGCGGAAAAATAAGAGAAATCCTCAGAAAGTGAC]
consensusID : consensus_6552#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2191 fasta sequence
[CTTCTGCTGCTTCCGCGCAGAAGAAGACCAATTCCTCGCGCCACCTCCACCACCGCCTCCGCCGCCGCCGTGGACGCCGGGATGGATCTGCGGCGGCCGACGACGCGCTCCTCGTCGGGGGGAGTGGAGCCGAGGTACCGGCAGGTCGGCTTCTTCACCACCACTGCCGAGCCCGCCGCGGCGGCGGCGTCGTCTTCCTCCTCCCCGCGTGGCTCCGACGTCTACCCGGGGTCGCTCTCCCCCGTGATGATCCCGCCCCCGCGCATCCCCGACCACCTCACCGCCCTTTCTCCCGCCCCCGTCTCGCTCCTGCCCTCCTCCCCGCCGCCGCCTTCGTCATCCCGCCTCGACGCCGCAGAATCCGACCTCGACGACGACGACGACGACGACGTTGACGTCTCGTGGGCGCGGCCACCTCCACCTGCCCTTCTCGAATCAAAGGAAGGTCTTCCTGATACACAGAATGAAGGTGCTCCAGCTCCAGCCCCAGTTCAACAAAAACAGAAGCTTTCTAAAGCAGAGAGACGTGCTATTCAGGAAGCTCAGCGTGCAGCCAAAGCTTCTGCAAAGGAGGCAGGGTTATCAAGAAAATCTGTAGCCACAGTTTCTACTTCTAATGCTGCAATGTCAAAACAACTCAAAACTGTAAAGACACCTCCCAAGAAAGATCTGCCCCAACTTACACCTCCAGTTGCTTCTGAAAAGAAGACTAGTGAGCACCCTCCTGACAGAGATAGAAAGAAAGATGTTCCTCCCCCTCGTATGCAGTTTGATAATGTACATCGGGTGGAGAAAACAAAGAAGCATTCACTGGTCAACCAAGCAGAAGCACAAAACAGAGTCGAATTGTTCAGGCATCTGCCTCAATATGTACATGGAACTCAGCTTCCTGACCTCGAGTCAAAATTTTTTCATCTTGATCTAATGCATCCTTCTGTCTACAAGGTTGGACTTCAATTTTTGTCTGGTGTTATATCAGGTGGCAATGCTTGTTGCGTAGCAAT-GCTTCTTGCTTTCAGAGAGGCCATAAAAGATTACTCTACACCTTCCACCAAAACTCTCAACCGAGATCTTACTGCTAAAATCAGTAGCTACGTGTCATTTCTCATCGAGTGCAAGCCTCTTTCAATCAGCATGGGCAATGCTATTAGGTTTTTGAAGAACAGAATTGCCAAGCTATTGCTTACATTGTCTGAGTCAGAAGCTAAAGCTAGCCTACAGTCTGACATTGATCGGTTTATAAATGAGAAGATAATAATTGCAGACCATGTCATTGTTAGCCATGCAATAGCCAAAGTCAGAGATGATGATGTATTACTGACATACGCATCATCCTCTGTTGTTGAAATGATTTTTGATCATGCTAATGAGCTTGGAAAGAAGTTTCGTGTTGTTGTGGTAGATTCTCGTCCGAACAACGAGGGACAAGCACTATTGCACAGATTAGTTGCAAAGGGCATCA-GTTGCACATATACGCACATTAATGCCATCTCATACATCATGCATGAGGTCACAAGGGTTTTTTTGGGTGCCTCTTCGATATTGTCAAATGGAGCAGTTTACTCCAGCGTTGGGACAGCAGCTGTAGCAATGGTTGCTCATGCCTTTGGAGTGCCTGTTTTAGTGTGCTGTGAGGCGTATAAATTGCATGAGAGGGTTCAACTTGATTCTATATGCTCTAATGAACTTGGTGATCCAGATGTTATTTCAAGAGTTCCTGAGAGGGAAGATTTGTGCCACCTTAAAAACTGTACTTATAATGAAAATCTACAACTTCTGAATCTTAAGTATGACACTATGCCTTCCGACTATGTTTCTATGATCATAACAGAATATGGAATGCTCCCACCTACTAGTGTGCCAGTCATTGTGAGAGAGTACCGCAGGGAGCACATATGGATATAGAACGAATGATATTTTCCTTGATGATTTAATGAGTTGGATTTTTAATATGAGGCGAGAGCAAACAACCAGCCAACAA-GGAATGCAG-TTTTGGATGTAGATAGGAC-GGGTCATGCAGGAAAAGTCTCACATGTGAACAGATGCTAGATCCAAGGATTTCTAGCTCGCTTGTTATCTTCAGTA-TTTGTATTCATACTAAATGTGACTGTTGATTAGTACACAGACTTGTTATCCTGTACTGAGGTGACCAGACATGAATTTCAATGGCACATCAGTTAACACCGCTTTT]
[+] EMBL AK103148 [CTTCTGCTGCTTCCGCGCAGAAGAAGACCAATTCCTCGCGCCACCTCCACCACCGCCTCCGCCGCCGCCGTGGACGCCGGGATGGATCTGCGGCGGCCGACGACGCGCTCCTCGTCGGGGGGAGTGGAGCCGAGGTACCGGCAGGTCGGCTTCTTCACCACCACTGCCGAGCCCGCCGCGGCGGCGGCGTCGTCTTCCTCCTCCCCGCGTGGCTCCGACGTCTACCCGGGGTCGCTCTCCCCCGTGATGATCCCGCCCCCGCGCATCCCCGACCACCTCACCGCCCTTTCTCCCGCCCCCGTCTCGCTCCTGCCCTCCTCCCCGCCGCCGCCTTCGTCATCCCGCCTCGACGCCGCAGAATCCGACCTCGACGACGACGACGACGACGACGTTGACGTCTCGTGGGCGCGGCCACCTCCACCTGCCCTTCTCGAATCAAAGGAAGGTCTTCCTGATACACAGAATGAAGGTGCTCCAGCTCCAGCCCCAGTTCAACAAAAACAGAAGCTTTCTAAAGCAGAGAGACGTGCTATTCAGGAAGCTCAGCGTGCAGCCAAAGCTTCTGCAAAGGAGGCAGGGTTATCAAGAAAATCTGTAGCCACAGTTTCTACTTCTAATGCTGCAATGTCAAAACAACTCAAAACTGTAAAGACACCTCCCAAGAAAGATCTGCCCCAACTTACACCTCCAGTTGCTTCTGAAAAGAAGACTAGTGAGCACCCTCCTGACAGAGATAGAAAGAAAGATGTTCCTCCCCCTCGTATGCAGTTTGATAATGTACATCGGGTGGAGAAAACAAAGAAGCATTCACTGGTCAACCAAGCAGAAGCACAAAACAGAGTCGAATTGTTCAGGCATCTGCCTCAATATGTACATGGAACTCAGCTTCCTGACCTCGAGTCAAAATTTTTTCATCTTGATCTAATGCATCCTTCTGTCTACAAGGTTGGACTTCAATTTTTGTCTGGTGTTATATCAGGTGGCAATGCTTGTTGCGTAGCAAT GCTTCTTGCTTTCAGAGAGGCCATAAAAGATTACTCTACACCTTCCACCAAAACTCTCAACCGAGATCTTACTGCTAAAATCAGTAGCTACGTGTCATTTCTCATCGAGTGCAAGCCTCTTTCAATCAGCATGGGCAATGCTATTAGGTTTTTGAAGAACAGAATTGCCAAGCTATTGCTTACATTGTCTGAGTCAGAAGCTAAAGCTAGCCTACAGTCTGACATTGATCGGTTTATAAATGAGAAGATAATAATTGCAGACCATGTCATTGTTAGCCATGCAATAGCCAAAGTCAGAGATGATGATGTATTACTGACATACGCATCATCCTCTGTTGTTGAAATGATTTTTGATCATGCTAATGAGCTTGGAAAGAAGTTTCGTGTTGTTGTGGTAGATTCTCGTCCGAACAACGAGGGACAAGCACTATTGCACAGATTAGTTGCAAAGGGCATCA GTTGCACATATACGCACATTAATGCCATCTCATACATCATGCATGAGGTCACAAGGGTTTTTTTGGGTGCCTCTTCGATATTGTCAAATGGAGCAGTTTACTCCAGCGTTGGGACAGCAGCTGTAGCAATGGTTGCTCATGCCTTTGGAGTGCCTGTTTTAGTGTGCTGTGAGGCGTATAAATTGCATGAGAGGGTTCAACTTGATTCTATATGCTCTAATGAACTTGGTGATCCAGATGTTATTTCAAGAGTTCCTGAGAGGGAAGATTTGTGCCACCTTAAAAACTGTACTTATAATGAAAATCTACAACTTCTGAATCTTAAGTATGACACTATGCCTTCCGACTATGTTTCTATGATCATAACAGAATATGGAATGCTCCCACCTACTAGTGTGCCAGTCATTGTGAGAGAGTACCGCAGGGAGCACATATGGATATAGAACGAATGATATTTTCCTTGATGATTTAATGAGTTGGATTTTTAATATGAGGCGAGAGCAAACAACCAGCCAACAA GGAATGCAG TTTTGGATGTAGATAGGAC GGGTCATGCAGGAAAAGTCTCACATGTGAACAGATGCTAGATCCAAGGATTTCTAGCTCGCTTGTTATCTTCAGTA TTTGTATTCATACTAAATGTGACTGTTGATTAGTACACAGACTTGTTATCCTGTACTGAGGTGACCAGACATGAATTTCAATGGCACATCAGTTAACACCGCTTTT]
[+] EMBL OSR30431A [ GAGTCGAATTGTTCAGGCATCTGCCTCAATATGTACATGGAACTCAGCTTCCTGACCTCGAGTCAAAATTTTTTCATCTTGATCTAATGCATCCTTCTGTCTACAAGGTTGGACTTCAATTTTTGTCTGGTGTTATATCAGGTGGCAATGCTTGTTGCGTAG AATNGCTTCTTGCTTTCAGAGAGGCCATAAAAGATTACTCTACACCTTCCACCAAAACTCTCAACCGAGATCTTACTGCTAAAATCAGTAGCTACGTGTCATTTCTCATCGAGTGCAAGCCTCTTTCAATCAGCATGGGCAATGCTATTAGGTTTTTGAAGAACAGAATTGCCAAGCTATTGCTTACATTGTCTGAGTCAGAAGCTAAAGCTAGCCTACAGTCTGACATTGATCGGTTTATAAA ]
[+] EMBL CA767233 [ TTTTTGATCCTGCTAATGAGCTTGGAAAGAAGTTTCGTGTTGTTGTGGTAGATTCTCGTCCGAACAACGAGGGACAAGCACTATTGCACAGATTAGTTGCAAAGGGCATCANGTTGCACATATACGCACATTAATGCCATCTCATACATCATGCATGAGGTCACAAGGGTTTTTTTGGGTGCCTCTTCGATATTGTCAAATGGAGCAGTTTACTCCAGCGTTGGGACAGCAGCTGTAGCAATGGTTGCTCATGCCTTTGGAGTGCCTGTTTTAGTGTGCTGTGAGGCGTATAAATTGCATGAGAGGGTTCAACTTGATTCTATATGCTCTAATGAACTTGGTGATCCAGATGTTATTTCAAGAGTTCCTGAGAGGGAAGATTTGTGCCACCTTAAAAACTGTACTTATAATGAAAATCTACAACTTCTGAATCTTAAGTATGACACTATGCCTTCCGACTATGTTTCTATGATCATAACAGAATATGGAATGCTCCCACCTACTAGTGTGCCAGCCATTGTGAGAGAGTACCGCAGGGAGCACATATGGATATAGAACGAATGATATTTTCCTTGATGATTTAATGAGTTGGATTTTTAATATGAGGCGAGAGCAAACAAGCAGCCAACAAGGGAATGCAGNTTTTGGATGTAGATAGGACGGGGTCATGCAGGAAAAGTCTCACATGTGAACAGATGCTAGATCCAAGGATTTCTAGCTCGCTTGGTATCTTCAGNANTTGGNATTCATACTAAGGGGGACTGGTGATTAGTACACAGACTTGNTATNCTGTn ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_6552#0 --TCTGCTGCTTCCGCGCAGAAGAAGACCAATTCCTCGCGCCACCTCCACCACCGCCTCC 58
consensus_6552#1 CTTCTGCTGCTTCCGCGCAGAAGAAGACCAATTCCTCGCGCCACCTCCACCACCGCCTCC 60
**********************************************************
consensus_6552#0 GCCGCCGCCGTGGACGCCGGGATGGATCTGCGGCGGCCGACGACGCGCTCCTCGTCGGGG 118
consensus_6552#1 GCCGCCGCCGTGGACGCCGGGATGGATCTGCGGCGGCCGACGACGCGCTCCTCGTCGGGG 120
************************************************************
consensus_6552#0 GGAGTGGAGCCGAGGTACCGGCAGGTCGGCTTCGTCACCACCACTGCCGAGCCCGCCGCG 178
consensus_6552#1 GGAGTGGAGCCGAGGTACCGGCAGGTCGGCTTCTTCACCACCACTGCCGAGCCCGCCGCG 180
********************************* **************************
consensus_6552#0 GCGGCGGCGTCGTCTTCCTCCTCCCCGCGTGGCTCCGACGTCTACCCGGGGTCGCTCTCC 238
consensus_6552#1 GCGGCGGCGTCGTCTTCCTCCTCCCCGCGTGGCTCCGACGTCTACCCGGGGTCGCTCTCC 240
************************************************************
consensus_6552#0 CCCGTGATGATCCCGCCCCCGCGCATCCCCGACCACCTCACCGCCCTTTCTCCCGCCCCC 298
consensus_6552#1 CCCGTGATGATCCCGCCCCCGCGCATCCCCGACCACCTCACCGCCCTTTCTCCCGCCCCC 300
************************************************************
consensus_6552#0 GTCTCGCTCCTGCCCTCCTCCCCGCCGCCGCCTTCGTCATCCCGCCTCGACGCCGCAGAA 358
consensus_6552#1 GTCTCGCTCCTGCCCTCCTCCCCGCCGCCGCCTTCGTCATCCCGCCTCGACGCCGCAGAA 360
************************************************************
consensus_6552#0 TCCGACCTCGACGACGACGACGACGACGACGTTGACGTCTCGTGGGCGCGGCCACCTCCA 418
consensus_6552#1 TCCGACCTCGACGACGACGACGACGACGACGTTGACGTCTCGTGGGCGCGGCCACCTCCA 420
************************************************************
consensus_6552#0 CCTGCCCTTCTCGAATCAAAGGAAGGTCTTCCTGATACACAGAATGAAGGTGCTCCAGCT 478
consensus_6552#1 CCTGCCCTTCTCGAATCAAAGGAAGGTCTTCCTGATACACAGAATGAAGGTGCTCCAGCT 480
************************************************************
consensus_6552#0 CCAGCCCCAGTTCAACAAAAACAGAAGCTTTCTAAAGCAGAGAGACGTGCTATTCAGGAA 538
consensus_6552#1 CCAGCCCCAGTTCAACAAAAACAGAAGCTTTCTAAAGCAGAGAGACGTGCTATTCAGGAA 540
************************************************************
consensus_6552#0 GCTCAGCGTGCAGCCAAAGCTTCTGCAAAGGAGGCAGGGTTATCAAGAAAATCTGTAGCC 598
consensus_6552#1 GCTCAGCGTGCAGCCAAAGCTTCTGCAAAGGAGGCAGGGTTATCAAGAAAATCTGTAGCC 600
************************************************************
consensus_6552#0 ACAGTTTCTACTTCTAATGCTGCAATGTCAAAACAACTCAAAACTGTAAAGACACCTCCC 658
consensus_6552#1 ACAGTTTCTACTTCTAATGCTGCAATGTCAAAACAACTCAAAACTGTAAAGACACCTCCC 660
************************************************************
consensus_6552#0 AAGAAAGATCTGCCCCAACTTACACCTCCAGTTGCTTCTGAAAAGAAGACTAGTGAGCAC 718
consensus_6552#1 AAGAAAGATCTGCCCCAACTTACACCTCCAGTTGCTTCTGAAAAGAAGACTAGTGAGCAC 720
************************************************************
consensus_6552#0 CCTCCTGACAGAGATAGAAAGAAAGATGTTCCTCCCCCTCGTATGCAGTTTGATAATGTA 778
consensus_6552#1 CCTCCTGACAGAGATAGAAAGAAAGATGTTCCTCCCCCTCGTATGCAGTTTGATAATGTA 780
************************************************************
consensus_6552#0 CATCGGGTGGAGAAAACAAAGAAGCATTCACTGGTCAACCAAGTAGAAGCACAAAACAGA 838
consensus_6552#1 CATCGGGTGGAGAAAACAAAGAAGCATTCACTGGTCAACCAAGCAGAAGCACAAAACAGA 840
******************************************* ****************
consensus_6552#0 GTCGAATTGTTCAGGCATCTGCCTCAATATGTACATGGAACTCAGCTTCCTGACCTCGAG 898
consensus_6552#1 GTCGAATTGTTCAGGCATCTGCCTCAATATGTACATGGAACTCAGCTTCCTGACCTCGAG 900
************************************************************
consensus_6552#0 TCAAAATTTTTTCATCTTGATCTAATGCATCCTTCTGTCTACAAGGTTGGACTTCAATTT 958
consensus_6552#1 TCAAAATTTTTTCATCTTGATCTAATGCATCCTTCTGTCTACAAGGTTGGACTTCAATTT 960
************************************************************
consensus_6552#0 TTGTCTGGTGTTATATCAGGTGGCAATGCTTGTTGCGTAGCAATGCTTCTTGCTTTCAGA 1018
consensus_6552#1 TTGTCTGGTGTTATATCAGGTGGCAATGCTTGTTGCGTAGCAATGCTTCTTGCTTTCAGA 1020
************************************************************
consensus_6552#0 GAGGCCATAAAAGATTACTCTACACCTTCCACCAAAACTCTCAACCGAGATCTTACTGCT 1078
consensus_6552#1 GAGGCCATAAAAGATTACTCTACACCTTCCACCAAAACTCTCAACCGAGATCTTACTGCT 1080
************************************************************
consensus_6552#0 AAAATCAGTAGCTACGTGTCATTTCTCATCGAGTGCAAGCCTCTTTCAATCAGCATGGGC 1138
consensus_6552#1 AAAATCAGTAGCTACGTGTCATTTCTCATCGAGTGCAAGCCTCTTTCAATCAGCATGGGC 1140
************************************************************
consensus_6552#0 AATGCTATTAGGTTTTTGAAGAACAGAATTGCCAAGCTATTGCTTACATTGTCTGAGTCA 1198
consensus_6552#1 AATGCTATTAGGTTTTTGAAGAACAGAATTGCCAAGCTATTGCTTACATTGTCTGAGTCA 1200
************************************************************
consensus_6552#0 GAAGCTAAAGCTAGCCTACAGTCTGACATTGATCGGTTTATAAATGAGAAGATAATAATT 1258
consensus_6552#1 GAAGCTAAAGCTAGCCTACAGTCTGACATTGATCGGTTTATAAATGAGAAGATAATAATT 1260
************************************************************
consensus_6552#0 GCAGACCATGTCATTGTTAGCCATGCAATAGCCAAAGTCAGAGATGATGATGTATTACTG 1318
consensus_6552#1 GCAGACCATGTCATTGTTAGCCATGCAATAGCCAAAGTCAGAGATGATGATGTATTACTG 1320
************************************************************
consensus_6552#0 ACATACGCATCATCCTCTGTTGTTGAAATGATTTTTGATCATGCTAATGAGCTTGGAAAG 1378
consensus_6552#1 ACATACGCATCATCCTCTGTTGTTGAAATGATTTTTGATCATGCTAATGAGCTTGGAAAG 1380
************************************************************
consensus_6552#0 AAGTTTCGTGTTGTTGTGGTAGATTCTCGTCCGAACAACGAGGGACAAGCACTATTGCAC 1438
consensus_6552#1 AAGTTTCGTGTTGTTGTGGTAGATTCTCGTCCGAACAACGAGGGACAAGCACTATTGCAC 1440
************************************************************
consensus_6552#0 AGATTAGTTGCAAAGGGCATCAGTTGCACATATACGCACATTAATGCCATCTCATACATC 1498
consensus_6552#1 AGATTAGTTGCAAAGGGCATCAGTTGCACATATACGCACATTAATGCCATCTCATACATC 1500
************************************************************
consensus_6552#0 ATGCATGAGGTCACAAGGGTTTTTTTGGGTGCCTCTTCGATATTGTCAAATGGAGCAGTT 1558
consensus_6552#1 ATGCATGAGGTCACAAGGGTTTTTTTGGGTGCCTCTTCGATATTGTCAAATGGAGCAGTT 1560
************************************************************
consensus_6552#0 TACTCCAGCGTTGGGACAGCAGCTGTAGCAATGGTTGCTCATGCCTTTGGAGTGCCTGTT 1618
consensus_6552#1 TACTCCAGCGTTGGGACAGCAGCTGTAGCAATGGTTGCTCATGCCTTTGGAGTGCCTGTT 1620
************************************************************
consensus_6552#0 TTAGTGTGCTGTGAGGCGTATAAATTGCATGAGAGGGTTCAACTTGATTCTATATGCTCT 1678
consensus_6552#1 TTAGTGTGCTGTGAGGCGTATAAATTGCATGAGAGGGTTCAACTTGATTCTATATGCTCT 1680
************************************************************
consensus_6552#0 AATGAACTTGGTGATCCAGATGTTATTTCAAGAGTTCCTGAGAGGGAAGATTTGTGCCAC 1738
consensus_6552#1 AATGAACTTGGTGATCCAGATGTTATTTCAAGAGTTCCTGAGAGGGAAGATTTGTGCCAC 1740
************************************************************
consensus_6552#0 CTTAAAAACTGTACTTATAATGAAAATCTACAACTTCTGAATCTTAAGTATGACACTATG 1798
consensus_6552#1 CTTAAAAACTGTACTTATAATGAAAATCTACAACTTCTGAATCTTAAGTATGACACTATG 1800
************************************************************
consensus_6552#0 CCTTCCGACTATGTTTCTATGATCATAACAGAATATGGAATGCTCCCACCTACTAGTGTG 1858
consensus_6552#1 CCTTCCGACTATGTTTCTATGATCATAACAGAATATGGAATGCTCCCACCTACTAGTGTG 1860
************************************************************
consensus_6552#0 CCAGTCATTGTGAGAGAGTACCGCAGGGAGCACATATGGATATAGAACGAATGATATTTT 1918
consensus_6552#1 CCAGTCATTGTGAGAGAGTACCGCAGGGAGCACATATGGATATAGAACGAATGATATTTT 1920
************************************************************
consensus_6552#0 CCTTGATGATTTAATGAGTTGGATTTTTAATATGAGGTACTGTCTATCAGCATCATCGTT 1978
consensus_6552#1 CCTTGATGATTTAATGAGTTGGATTTTTAATATGAGGCGAGAGCAAACAAC--CAGCCAA 1978
************************************* * * ** * ** *
consensus_6552#0 TGAGTTGTGTGGTCAC---CCTTGGTCCAATGCGCACATGAACGCTAGTCCTGCCACCAG 2035
consensus_6552#1 CAAGGAATGCAGTTTTGGATGTAGATAGGACGGGT-CATGCAGGAAAAGTCTCACATGTG 2037
** ** ** * * * * * * **** * * * ** ** *
consensus_6552#0 CAAGGGATGTTC-ATCAGTAGTCATTTGAACAGCTTGTTGTCAGTC-TACAAGAATGGAC 2093
consensus_6552#1 -AACAGATGCTAGATCCAAGGATTTCTAGCTCGCTTGTTATCTTCAGTATTTGTATTCAT 2096
** **** * *** * * * ******* ** ** * ** *
consensus_6552#0 CCTACAAATAAATCATGCATCTGAGTTAGATCTATGTCACTTTGGTCAT-TGAAAGCTCA 2152
consensus_6552#1 ACTAAATGTGACTGTTGATTAGTACACAGACTTGTTATCCTGTACTGAGGTGACCAGACA 2156
*** * * * * ** * * *** * * ** * * * *** **
consensus_6552#0 TCAAAT-CAAGGGCTCAAGTTTTAAGTGGCACCAGGTGGTGGATGGCCTGGTGAATTACT 2211
consensus_6552#1 TGAATTTCAATGGCACA----TCAGTTAACACCGCTTTT--------------------- 2191
* ** * *** *** ** * * * **** *
consensus_6552#0 GTTGCTCCACACTCGGTGGATCATTACTGCGGACCTAATGAGTTCTCAGTACACACTAAT 2271
consensus_6552#1 ------------------------------------------------------------
consensus_6552#0 GGGCATCTTTTGGTGGGGTTCATTGCTTTCCTTTAAGCCTGCTAATGCTACTGCCTATTT 2331
consensus_6552#1 ------------------------------------------------------------
consensus_6552#0 TTCAGCTAGCTCAGACCTGCCCCAACATTGTTGTTGCTGCCTATATTTATGCTGATCAAG 2391
consensus_6552#1 ------------------------------------------------------------
consensus_6552#0 ACCTGTTTACAGCGACGGTCCCTGGCAAGGCACCAGTTGATCAACTGTCTGAAAACGTGA 2451
consensus_6552#1 ------------------------------------------------------------
consensus_6552#0 TGGCAGATTGAATTGCTCAGCGTAAGAGTGCAGTAGGTACTGTAGCAGGTCTGGGTTGTG 2511
consensus_6552#1 ------------------------------------------------------------
consensus_6552#0 TTTTGGCTTGGTGTTGGCTTGCTCAGACAGGATCTTCAGCTGTATCAGCATGAATAGACG 2571
consensus_6552#1 ------------------------------------------------------------
consensus_6552#0 ACGACATGATTGTTTTGGGGAGTTTTTCACCGGCTTGCACATATATTAATCTCCCACGCT 2631
consensus_6552#1 ------------------------------------------------------------
consensus_6552#0 TGTCCAGTTGGGCAACTATCATTGTCAATTCAAGGTCATATTGGTGTCCATGTCTGCCAA 2691
consensus_6552#1 ------------------------------------------------------------
consensus_6552#0 AGTTCTTGGGTACAAGGACTGCCACAGTTCTGTTCCTGGCTGCTACGACAGGCCTTGTTT 2751
consensus_6552#1 ------------------------------------------------------------
consensus_6552#0 AGTGGAGAAATTGTGGATCAATTCGTCGCCTGATAGCTGTAAATCCTAAAACTCCTGTAG 2811
consensus_6552#1 ------------------------------------------------------------
consensus_6552#0 TGCGGAAAAATAAGAGAAATCCTCAGAAAGTGAC 2845
consensus_6552#1 ----------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||