cluster # 6641

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Oryza sativa
cluster # 6641 cluster # 6641 Sequences # 4 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6641#0 length = 3249 sequences # 3

consensus_6641#1 length = 159 sequences # 1

consensusID : consensus_6641#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3249
fasta sequence

                              [AAACCCTAGCCTCCCCGCTGCTCCTCTCCTCCCCCCGTCCCCCGGCAATGGCGAAGACGAAGCCCACGGCGGCGGCGGCGGCGTCGGGGAGCAACAACCCCTTCGAGGCCATCTGGTCCCGCCGCAAGTTCGACGTGCTGGGCAAGAAGCGCAAGGGGGAGGAGCGCCGCATCGGCCGCGCCCGCTCTGAGGCCATCCACAAGAGGGAGAACACTCTGCTCAAGGAGTTCGAGCAGAGCGCCAAGTCGTCCGTGTTCCAGGACCGGCGGATCGGGGAGAGGGACGAGACGCTGCCCGAGTTCGACAAAGTTATCCTCCGCCAGCAGCGTGAGCACATGGCAAAGCTGAAACGAGAAAGCAAATACAATCTATCTGATGATGAGGAAGATGAGGTTGATGTTCACCTGCCTCACTCTCTCTCGGGAAAAGATGATTTTGATGAAGAAGTGCCTCTTGATGATTATAGTGATGAAGAAGGTCACATGATCCTCTCGAAGAACCGCATACCTCTCCAAAGTGGTGATGTTCCTTCAGAAATTGGTCTTCCTGAAGGAACTAATGTTCACAAGAGCAAGAAGGAAGTTATGTCAGAGATCATTTTAAAGAGCAAATTTTACAAGGCCCAAAAGGCCAAGGAGAGGGAAGAGGATGAACATCTTGTAGACAAGTTGGATAGTGACTTTGCAATGTTAGCCCACACAGGCGATGTTGTCCTTGACTCGATCAGCTAGAATGGATGCAAATAAATATAATTCAAGTACAGTCCAGAAAGATTCATTTGGTTTGACTGCCAAGGAGATTTTTAATAAGGAAAAACCAGATGCATATGATAAATTAGTGAAAGAAATGGTTATGGATCAACGTGCTCGTCCATCAGACAGGACAAAAACACCAGAAGAAATAGCTCAGGAGGAAAAAGAACGTCTTGAGAAGTTGGAGAAAGAGCGTCAGAAACGAATGCTTGGAACTGCTGAGTCCTCTGATGAAGATGATGATGATGACGAGGAGGGTGACCGCAGCACGAAGCTAGACAGCTCAAAACCTATATCTGGTGATGATCTTGGTGATTCCTTTTCTACTGATGAGCCAGCAAGAAAGGAAAAGGGCTGGGTCGATGAAATTTATGAAAGAGAGGGTAAAAAGATTGGTGAAGATGCTGAAGGGTCAGACAATGAAGAATCTGATGATGATGGTGATGACGATGATGATGATGCTGAGGATGGTGATGATGATGCTGAGGATGAAGATGAAGAAGAGGATTTAAGTGATAATGACTTTGGTAATATGTCTGTTAGAGACTGGGAGCAAAGTGACGATGATGAGGTTACCGTGGAAGAAGATGAAATGGAAGGTCTCAAACAAAAGGAACAGAAGATCAGTGGCAAAGTGGTGAAAAAAGATCTACAAAATTCAAAGAAAGAGTCTAATGCAGAATCGCAAGTCAAGGATGACAATCTTCCTTTTGTGATAGAAGCACCAAGTAACTTGAAAGATCTATGCTCCTTGCTAGATGGTTGGTCAGAAACTGAAATAATTGAGATTATTAGTCGAATTCGTACATGCAATTCAATAAGGCTTGCAGCTGAAAATAGAAAGAAGATGCAAGTTTTCTATGGTGTTCTCCTGCAGTACTTTGCAGTATTAGCTACTCAGAGTCCAGTGAGATTCAAACTAATTGACACCCTTGTTAAGCCTTTAATTGAGATGAGTGGGGAGACTCCATATTTTGCTGCCATCTGTGCGAGGCAGCGACTTATCCACACACGTACTCGTCTATGTGAAGATATAAAGGTTTCAGGAAAGAGCTGCTGGCCAAGTTTGAAAACATTACTTCTTCTGCGGTTATGGTCTCTTATATTTCCCTGCTCTGACTTCCGCCATGTGGTAGCAACTCCAATGCTTTTGCTTATGTGTGAATATTTGATGCGATGCCCCATACAATCTGGTCGAGATGTAGCCGTTGGTTCTTTCTTGTGTTCCATGGTGCTTGTGGCTACTAAAGAGTCTAAGAAATTCTGCCCTGAAGCTGTCGTTTTTCTGCAATCTCTTTTGGTAACATCTCTGGGAGGAAACCTGGGATCTGACCTACGAAAAAAGATCAATGATCAATTTTTGGAGCTCAAGACAATGGAACCATGGCTTCATATCCATGAAAAAGTGCACGAGGTGAATCCAGCGAATATCCTGGAAGTCATATGCATGGATTCTGATGCTCCTTATTTCTCCTCTGATAATTTCAAGGCTAGTGTACTTCTATCTGTGGCTGAATGTTTAAGGGGATTTGTTATTATACACGAAGAACTATGTTCGTTCCCCGAAATTTTCCTGCCAATCTCTTCTTTGATGCAAGAAATTATGGATAAATCAGACTTGCCTGGATTGTTACAATACATTTTACATGAAGTCATTGGGTTGATTAAAAACAGAAGTGATGAAGTCCATGCATCAAGGCAGCCACTCCAAATGCGAAAGCAGAAGCCTGAACCAATCAGGCAGTTGAATCCGAAATTTGAAGAGAATTACATTAAAGGCCTTGATTATGACCCTGATCGGGAAAGGGCACAAATGAAGAAAATGAAGAAACGCCTTAAGAGTGAGAAGAAGGGTGCAATGCGCGAACTGCGTAAAGATAATTATTTCCTGTCTGCTGTGAAAGAGAAGGAGAGGATAAAACAAGAGCAAGAGAGAGCTGAAAAGTATGGAAAAGCCATGGCTTTCCTTCAGGAGCAGGAACATGCTTTTAAATCTGGACAGCTAGGGAAGGGCAGAAAAAGGAGGCGGTAACATTTTCTCCATATTTAGTGTGTGTAAATATATTGATTATATTCCCCATGCTGTTCAGTTCACCATCTTTCTTGGGTACTGGAGATTTAGACACAGCGAATGGCCTTTGCATGCTCCATTTTAACTGCCTGTTGTAACTTCTAGCTTGTGGACACACCGAAATACAAAAGTAGATGGTCAGAACTCCCTTGTTAGCAATATGGAGACGGAGCGTCACTTGCATGAAAGCTACTTGGAAGAATGTTTTTGCAATCTCCCCAACAAAGCACCAACATGGCAA-T-GGTTT-TTTTATTTCTCTTGTATCGGGAAATGGATTGCTCTACTGTGTTATACTCCTGCAATAGCAATTTTGATGTATCACAGCCAAGAGTTTTTGATGTGTTCCCTTTCCTTTTTGCACTCGTCAGATGTACTGGAATGTAAACCAATGAAAT-CCTTAATGTAACATTA-CTTCCATTGTAAAAA]

[+] EMBL AK068322             [AAACCCTAGCCTCCCCGCTGCTCCTCTCCTCCCCCCGTCCCCCGGCAATGGCGAAGACGAAGCCCACGGCGGCGGCGGCGGCGTCGGGGAGCAACAACCCCTTCGAGGCCATCTGGTCCCGCCGCAAGTTCGACGTGCTGGGCAAGAAGCGCAAGGGGGAGGAGCGCCGCATCGGCCGCGCCCGCTCTGAGGCCATCCACAAGAGGGAGAACACTCTGCTCAAGGAGTTCGAGCAGAGCGCCAAGTCGTCCGTGTTCCAGGACCGGCGGATCGGGGAGAGGGACGAGACGCTGCCCGAGTTCGACAAAGTTATCCTCCGCCAGCAGCGTGAGCACATGGCAAAGCTGAAACGAGAAAGCAAATACAATCTATCTGATGATGAGGAAGATGAGGTTGATGTTCACCTGCCTCACTCTCTCTCGGGAAAAGATGATTTTGATGAAGAAGTGCCTCTTGATGATTATAGTGATGAAGAAGGTCACATGATCCTCTCGAAGAACCGCATACCTCTCCAAAGTGGTGATGTTCCTTCAGAAATTGGTCTTCCTGAAGGAACTAATGTTCACAAGAGCAAGAAGGAAGTTATGTCAGAGATCATTTTAAAGAGCAAATTTTACAAGGCCCAAAAGGCCAAGGAGAGGGAAGAGGATGAACATCTTGTAGACAAGTTGGATAGTGACTTTGCAATGTTAGCCCACACAGGCGATGTTGTCCTTGACTCGATCAGCTAGAATGGATGCAAATAAATATAATTCAAGTACAGTCCAGAAAGATTCATTTGGTTTGACTGCCAAGGAGATTTTTAATAAGGAAAAACCAGATGCATATGATAAATTAGTGAAAGAAATGGTTATGGATCAACGTGCTCGTCCATCAGACAGGACAAAAACACCAGAAGAAATAGCTCAGGAGGAAAAAGAACGTCTTGAGAAGTTGGAGAAAGAGCGTCAGAAACGAATGCTTGGAACTGCTGAGTCCTCTGATGAAGATGATGATGATGACGAGGAGGGTGACCGCAGCACGAAGCTAGACAGCTCAAAACCTATATCTGGTGATGATCTTGGTGATTCCTTTTCTACTGATGAGCCAGCAAGAAAGGAAAAGGGCTGGGTCGATGAAATTTATGAAAGAGAGGGTAAAAAGATTGGTGAAGATGCTGAAGGGTCAGACAATGAAGAATCTGATGATGATGGTGATGACGATGATGATGATGCTGAGGATGGTGATGATGATGCTGAGGATGAAGATGAAGAAGAGGATTTAAGTGATAATGACTTTGGTAATATGTCTGTTAGAGACTGGGAGCAAAGTGACGATGATGAGGTTACCGTGGAAGAAGATGAAATGGAAGGTCTCAAACAAAAGGAACAGAAGATCAGTGGCAAAGTGGTGAAAAAAGATCTACAAAATTCAAAGAAAGAGTCTAATGCAGAATCGCAAGTCAAGGATGACAATCTTCCTTTTGTGATAGAAGCACCAAGTAACTTGAAAGATCTATGCTCCTTGCTAGATGGTTGGTCAGAAACTGAAATAATTGAGATTATTAGTCGAATTCGTACATGCAATTCAATAAGGCTTGCAGCTGAAAATAGAAAGAAGATGCAAGTTTTCTATGGTGTTCTCCTGCAGTACTTTGCAGTATTAGCTACTCAGAGTCCAGTGAGATTCAAACTAATTGACACCCTTGTTAAGCCTTTAATTGAGATGAGTGGGGAGACTCCATATTTTGCTGCCATCTGTGCGAGGCAGCGACTTATCCACACACGTACTCGTCTATGTGAAGATATAAAGGTTTCAGGAAAGAGCTGCTGGCCAAGTTTGAAAACATTACTTCTTCTGCGGTTATGGTCTCTTATATTTCCCTGCTCTGACTTCCGCCATGTGGTAGCAACTCCAATGCTTTTGCTTATGTGTGAATATTTGATGCGATGCCCCATACAATCTGGTCGAGATGTAGCCGTTGGTTCTTTCTTGTGTTCCATGGTGCTTGTGGCTACTAAAGAGTCTAAGAAATTCTGCCCTGAAGCTGTCGTTTTTCTGCAATCTCTTTTGGTAACATCTCTGGGAGGAAACCTGGGATCTGACCTACGAAAAAAGATCAATGATCAATTTTTGGAGCTCAAGACAATGGAACCATGGCTTCATATCCATGAAAAAGTGCACGAGGTGAATCCAGCGAATATCCTGGAAGTCATATGCATGGATTCTGATGCTCCTTATTTCTCCTCTGATAATTTCAAGGCTAGTGTACTTCTATCTGTGGCTGAATGTTTAAGGGGATTTGTTATTATACACGAAGAACTATGTTCGTTCCCCGAAATTTTCCTGCCAATCTCTTCTTTGATGCAAGAAATTATGGATAAATCAGACTTGCCTGGATTGTTACAATACATTTTACATGAAGTCATTGGGTTGATTAAAAACAGAAGTGATGAAGTCCATGCATCAAGGCAGCCACTCCAAATGCGAAAGCAGAAGCCTGAACCAATCAGGCAGTTGAATCCGAAATTTGAAGAGAATTACATTAAAGGCCTTGATTATGACCCTGATCGGGAAAGGGCACAAATGAAGAAAATGAAGAAACGCCTTAAGAGTGAGAAGAAGGGTGCAATGCGCGAACTGCGTAAAGATAATTATTTCCTGTCTGCTGTGAAAGAGAAGGAGAGGATAAAACAAGAGCAAGAGAGAGCTGAAAAGTATGGAAAAGCCATGGCTTTCCTTCAGGAGCAGGAACATGCTTTTAAATCTGGACAGCTAGGGAAGGGCAGAAAAAGGAGGCGGTAACATTTTCTCCATATTTAGTGTGTGTAAATATATTGATTATATTCCCCATGCTGTTCAGTTCACCATCTTTCTTGGGTACTGGAGATTTAGACACAGCGAATGGCCTTTGCATGCTCCATTTTAACTGCCTGTTGTAACTTCTAGCTTGTGGACACACCGAAATACAAAAGTAGATGGTCAGAACTCCCTTGTTAGCAATATGGAGACGGAGCGTCACTTGCATGAAAGCTACTTGGAAGAATGTTTTTGCAATCTCCCCAACAAAGCACCAACATGGCAA T GGTTT TTTTATTTCTCTTGTATCGGGAAATGGATTGCTCTACTGTGTTATACTCCTGCAATAGCAATTTTGATGTATCACAGCCAAGAGTTTTTGATGTGTTCCCTTTCCTTTTTGCACTCGTCAGATGTACTGGAATGTAAACCAATGAAAT CCTTAATGTAACATTA CTTCCA         ]
[+] EMBL AA750433             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CATTGAGTTGATTAAAAACAGAAGTGATGAAGTCCATGCATCAAGGCAGCCACTCCAAATGCGAAAG AGAAGCCTGAACCAATCAGGCAGTTGAATCCGAAATTTGAAGAGAATTACATTAAAGGCCTTAATTATGACCCTGATCGGGAAAGGGCACAAATGTAGAAAATGAAGAAACGCCTTAAG GTGAGAAGAAGGGTGCAATGCGCGAACTGCGTAAAGct                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BQ906456             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAAGTATGGAAAAGCCATGGCTTTCCTTCAGGAGCAGGAACATGCTTTTAAATCTGGACAGCTAGGGAA GGCAGAAAAAGGA GCGGTAACATTTTCTCCATATTTAGTGTGTGTAAATATATTGATTATATTCCCCATGCTGTTCAGTTCACCATCTTTCTTGGGTACTGGAGATTTAGACACAGCGAATGGCCTTTGCATGCTCCATTTTAACTGCCTGTTGTAACTTCTAGCTTGTGGACACACCGAAATAC AAAGTAGATGGTCAGAACTCCCTTGTTAGCAATATGGAGATGGAGCGTCACTTGCATGAAAGCTACTTGGAAGAATGTTTTTGCAATCTCCCCAAC AAGCACC ACATGGCAACTCGGTTTCCCCTATTTCTCTTGTATCGGGAAATGGATTGCTCTACTGTGTTATACTCCTGCAATAGCAATTTTGATGTATCACAGCCAAGAGTTTTTGATGTGTTCCCTTTCCTTTTTGCACTCGTCAGATGTACTGGAATGTAAACC ATGAAATCCCCCAATGTAACATTANNTTCCATTGTAAAAA]




>consensus_6641#0
AAACCCTAGCCTCCCCGCTGCTCCTCTCCTCCCCCCGTCCCCCGGCAATGGCGAAGACGA
AGCCCACGGCGGCGGCGGCGGCGTCGGGGAGCAACAACCCCTTCGAGGCCATCTGGTCCC
GCCGCAAGTTCGACGTGCTGGGCAAGAAGCGCAAGGGGGAGGAGCGCCGCATCGGCCGCG
CCCGCTCTGAGGCCATCCACAAGAGGGAGAACACTCTGCTCAAGGAGTTCGAGCAGAGCG
CCAAGTCGTCCGTGTTCCAGGACCGGCGGATCGGGGAGAGGGACGAGACGCTGCCCGAGT
TCGACAAAGTTATCCTCCGCCAGCAGCGTGAGCACATGGCAAAGCTGAAACGAGAAAGCA
AATACAATCTATCTGATGATGAGGAAGATGAGGTTGATGTTCACCTGCCTCACTCTCTCT
CGGGAAAAGATGATTTTGATGAAGAAGTGCCTCTTGATGATTATAGTGATGAAGAAGGTC
ACATGATCCTCTCGAAGAACCGCATACCTCTCCAAAGTGGTGATGTTCCTTCAGAAATTG
GTCTTCCTGAAGGAACTAATGTTCACAAGAGCAAGAAGGAAGTTATGTCAGAGATCATTT
TAAAGAGCAAATTTTACAAGGCCCAAAAGGCCAAGGAGAGGGAAGAGGATGAACATCTTG
TAGACAAGTTGGATAGTGACTTTGCAATGTTAGCCCACACAGGCGATGTTGTCCTTGACT
CGATCAGCTAGAATGGATGCAAATAAATATAATTCAAGTACAGTCCAGAAAGATTCATTT
GGTTTGACTGCCAAGGAGATTTTTAATAAGGAAAAACCAGATGCATATGATAAATTAGTG
AAAGAAATGGTTATGGATCAACGTGCTCGTCCATCAGACAGGACAAAAACACCAGAAGAA
ATAGCTCAGGAGGAAAAAGAACGTCTTGAGAAGTTGGAGAAAGAGCGTCAGAAACGAATG
CTTGGAACTGCTGAGTCCTCTGATGAAGATGATGATGATGACGAGGAGGGTGACCGCAGC
ACGAAGCTAGACAGCTCAAAACCTATATCTGGTGATGATCTTGGTGATTCCTTTTCTACT
GATGAGCCAGCAAGAAAGGAAAAGGGCTGGGTCGATGAAATTTATGAAAGAGAGGGTAAA
AAGATTGGTGAAGATGCTGAAGGGTCAGACAATGAAGAATCTGATGATGATGGTGATGAC
GATGATGATGATGCTGAGGATGGTGATGATGATGCTGAGGATGAAGATGAAGAAGAGGAT
TTAAGTGATAATGACTTTGGTAATATGTCTGTTAGAGACTGGGAGCAAAGTGACGATGAT
GAGGTTACCGTGGAAGAAGATGAAATGGAAGGTCTCAAACAAAAGGAACAGAAGATCAGT
GGCAAAGTGGTGAAAAAAGATCTACAAAATTCAAAGAAAGAGTCTAATGCAGAATCGCAA
GTCAAGGATGACAATCTTCCTTTTGTGATAGAAGCACCAAGTAACTTGAAAGATCTATGC
TCCTTGCTAGATGGTTGGTCAGAAACTGAAATAATTGAGATTATTAGTCGAATTCGTACA
TGCAATTCAATAAGGCTTGCAGCTGAAAATAGAAAGAAGATGCAAGTTTTCTATGGTGTT
CTCCTGCAGTACTTTGCAGTATTAGCTACTCAGAGTCCAGTGAGATTCAAACTAATTGAC
ACCCTTGTTAAGCCTTTAATTGAGATGAGTGGGGAGACTCCATATTTTGCTGCCATCTGT
GCGAGGCAGCGACTTATCCACACACGTACTCGTCTATGTGAAGATATAAAGGTTTCAGGA
AAGAGCTGCTGGCCAAGTTTGAAAACATTACTTCTTCTGCGGTTATGGTCTCTTATATTT
CCCTGCTCTGACTTCCGCCATGTGGTAGCAACTCCAATGCTTTTGCTTATGTGTGAATAT
TTGATGCGATGCCCCATACAATCTGGTCGAGATGTAGCCGTTGGTTCTTTCTTGTGTTCC
ATGGTGCTTGTGGCTACTAAAGAGTCTAAGAAATTCTGCCCTGAAGCTGTCGTTTTTCTG
CAATCTCTTTTGGTAACATCTCTGGGAGGAAACCTGGGATCTGACCTACGAAAAAAGATC
AATGATCAATTTTTGGAGCTCAAGACAATGGAACCATGGCTTCATATCCATGAAAAAGTG
CACGAGGTGAATCCAGCGAATATCCTGGAAGTCATATGCATGGATTCTGATGCTCCTTAT
TTCTCCTCTGATAATTTCAAGGCTAGTGTACTTCTATCTGTGGCTGAATGTTTAAGGGGA
TTTGTTATTATACACGAAGAACTATGTTCGTTCCCCGAAATTTTCCTGCCAATCTCTTCT
TTGATGCAAGAAATTATGGATAAATCAGACTTGCCTGGATTGTTACAATACATTTTACAT
GAAGTCATTGGGTTGATTAAAAACAGAAGTGATGAAGTCCATGCATCAAGGCAGCCACTC
CAAATGCGAAAGCAGAAGCCTGAACCAATCAGGCAGTTGAATCCGAAATTTGAAGAGAAT
TACATTAAAGGCCTTGATTATGACCCTGATCGGGAAAGGGCACAAATGAAGAAAATGAAG
AAACGCCTTAAGAGTGAGAAGAAGGGTGCAATGCGCGAACTGCGTAAAGATAATTATTTC
CTGTCTGCTGTGAAAGAGAAGGAGAGGATAAAACAAGAGCAAGAGAGAGCTGAAAAGTAT
GGAAAAGCCATGGCTTTCCTTCAGGAGCAGGAACATGCTTTTAAATCTGGACAGCTAGGG
AAGGGCAGAAAAAGGAGGCGGTAACATTTTCTCCATATTTAGTGTGTGTAAATATATTGA
TTATATTCCCCATGCTGTTCAGTTCACCATCTTTCTTGGGTACTGGAGATTTAGACACAG
CGAATGGCCTTTGCATGCTCCATTTTAACTGCCTGTTGTAACTTCTAGCTTGTGGACACA
CCGAAATACAAAAGTAGATGGTCAGAACTCCCTTGTTAGCAATATGGAGACGGAGCGTCA
CTTGCATGAAAGCTACTTGGAAGAATGTTTTTGCAATCTCCCCAACAAAGCACCAACATG
GCAATGGTTTTTTTATTTCTCTTGTATCGGGAAATGGATTGCTCTACTGTGTTATACTCC
TGCAATAGCAATTTTGATGTATCACAGCCAAGAGTTTTTGATGTGTTCCCTTTCCTTTTT
GCACTCGTCAGATGTACTGGAATGTAAACCAATGAAATCCTTAATGTAACATTACTTCCA
TTGTAAAAA

consensusID : consensus_6641#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 159
fasta sequence

                              [TGGATGGTTATCACTAGCCAAGAGTGTNTTTGGATGGTGGTTCCCTTTGCCTTGTTTGGCACTCGTGCAGATGGTACTGGAATGTAAACCAATGAAATCCTTAATGTAACATTACTTCCATTTTATAGCCATTCCTTGCCATGTTGTTCAAAAAAAAAA]

[+] EMBL BQ908149             [TGGATGGTTATCACTAGCCAAGAGTGTNTTTGGATGGTGGTTCCCTTTGCCTTGTTTGGCACTCGTGCAGATGGTACTGGAATGTAAACCAATGAAATCCTTAATGTAACATTACTTCCATTTTATAGCCATTCCTTGCCATGTTGTTCAAAAAAAAAA]




>consensus_6641#1
TGGATGGTTATCACTAGCCAAGAGTGTNTTTGGATGGTGGTTCCCTTTGCCTTGTTTGGC
ACTCGTGCAGATGGTACTGGAATGTAAACCAATGAAATCCTTAATGTAACATTACTTCCA
TTTTATAGCCATTCCTTGCCATGTTGTTCAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6641#0      AAACCCTAGCCTCCCCGCTGCTCCTCTCCTCCCCCCGTCCCCCGGCAATGGCGAAGACGA 60
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      AGCCCACGGCGGCGGCGGCGGCGTCGGGGAGCAACAACCCCTTCGAGGCCATCTGGTCCC 120
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      GCCGCAAGTTCGACGTGCTGGGCAAGAAGCGCAAGGGGGAGGAGCGCCGCATCGGCCGCG 180
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      CCCGCTCTGAGGCCATCCACAAGAGGGAGAACACTCTGCTCAAGGAGTTCGAGCAGAGCG 240
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      CCAAGTCGTCCGTGTTCCAGGACCGGCGGATCGGGGAGAGGGACGAGACGCTGCCCGAGT 300
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      TCGACAAAGTTATCCTCCGCCAGCAGCGTGAGCACATGGCAAAGCTGAAACGAGAAAGCA 360
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      AATACAATCTATCTGATGATGAGGAAGATGAGGTTGATGTTCACCTGCCTCACTCTCTCT 420
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      CGGGAAAAGATGATTTTGATGAAGAAGTGCCTCTTGATGATTATAGTGATGAAGAAGGTC 480
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      ACATGATCCTCTCGAAGAACCGCATACCTCTCCAAAGTGGTGATGTTCCTTCAGAAATTG 540
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      GTCTTCCTGAAGGAACTAATGTTCACAAGAGCAAGAAGGAAGTTATGTCAGAGATCATTT 600
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      TAAAGAGCAAATTTTACAAGGCCCAAAAGGCCAAGGAGAGGGAAGAGGATGAACATCTTG 660
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      TAGACAAGTTGGATAGTGACTTTGCAATGTTAGCCCACACAGGCGATGTTGTCCTTGACT 720
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      CGATCAGCTAGAATGGATGCAAATAAATATAATTCAAGTACAGTCCAGAAAGATTCATTT 780
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      GGTTTGACTGCCAAGGAGATTTTTAATAAGGAAAAACCAGATGCATATGATAAATTAGTG 840
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      AAAGAAATGGTTATGGATCAACGTGCTCGTCCATCAGACAGGACAAAAACACCAGAAGAA 900
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      ATAGCTCAGGAGGAAAAAGAACGTCTTGAGAAGTTGGAGAAAGAGCGTCAGAAACGAATG 960
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      CTTGGAACTGCTGAGTCCTCTGATGAAGATGATGATGATGACGAGGAGGGTGACCGCAGC 1020
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      ACGAAGCTAGACAGCTCAAAACCTATATCTGGTGATGATCTTGGTGATTCCTTTTCTACT 1080
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      GATGAGCCAGCAAGAAAGGAAAAGGGCTGGGTCGATGAAATTTATGAAAGAGAGGGTAAA 1140
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      AAGATTGGTGAAGATGCTGAAGGGTCAGACAATGAAGAATCTGATGATGATGGTGATGAC 1200
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      GATGATGATGATGCTGAGGATGGTGATGATGATGCTGAGGATGAAGATGAAGAAGAGGAT 1260
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      TTAAGTGATAATGACTTTGGTAATATGTCTGTTAGAGACTGGGAGCAAAGTGACGATGAT 1320
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      GAGGTTACCGTGGAAGAAGATGAAATGGAAGGTCTCAAACAAAAGGAACAGAAGATCAGT 1380
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      GGCAAAGTGGTGAAAAAAGATCTACAAAATTCAAAGAAAGAGTCTAATGCAGAATCGCAA 1440
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      GTCAAGGATGACAATCTTCCTTTTGTGATAGAAGCACCAAGTAACTTGAAAGATCTATGC 1500
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      TCCTTGCTAGATGGTTGGTCAGAAACTGAAATAATTGAGATTATTAGTCGAATTCGTACA 1560
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      TGCAATTCAATAAGGCTTGCAGCTGAAAATAGAAAGAAGATGCAAGTTTTCTATGGTGTT 1620
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      CTCCTGCAGTACTTTGCAGTATTAGCTACTCAGAGTCCAGTGAGATTCAAACTAATTGAC 1680
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      ACCCTTGTTAAGCCTTTAATTGAGATGAGTGGGGAGACTCCATATTTTGCTGCCATCTGT 1740
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      GCGAGGCAGCGACTTATCCACACACGTACTCGTCTATGTGAAGATATAAAGGTTTCAGGA 1800
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      AAGAGCTGCTGGCCAAGTTTGAAAACATTACTTCTTCTGCGGTTATGGTCTCTTATATTT 1860
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      CCCTGCTCTGACTTCCGCCATGTGGTAGCAACTCCAATGCTTTTGCTTATGTGTGAATAT 1920
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      TTGATGCGATGCCCCATACAATCTGGTCGAGATGTAGCCGTTGGTTCTTTCTTGTGTTCC 1980
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      ATGGTGCTTGTGGCTACTAAAGAGTCTAAGAAATTCTGCCCTGAAGCTGTCGTTTTTCTG 2040
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      CAATCTCTTTTGGTAACATCTCTGGGAGGAAACCTGGGATCTGACCTACGAAAAAAGATC 2100
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      AATGATCAATTTTTGGAGCTCAAGACAATGGAACCATGGCTTCATATCCATGAAAAAGTG 2160
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      CACGAGGTGAATCCAGCGAATATCCTGGAAGTCATATGCATGGATTCTGATGCTCCTTAT 2220
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      TTCTCCTCTGATAATTTCAAGGCTAGTGTACTTCTATCTGTGGCTGAATGTTTAAGGGGA 2280
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      TTTGTTATTATACACGAAGAACTATGTTCGTTCCCCGAAATTTTCCTGCCAATCTCTTCT 2340
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      TTGATGCAAGAAATTATGGATAAATCAGACTTGCCTGGATTGTTACAATACATTTTACAT 2400
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      GAAGTCATTGGGTTGATTAAAAACAGAAGTGATGAAGTCCATGCATCAAGGCAGCCACTC 2460
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      CAAATGCGAAAGCAGAAGCCTGAACCAATCAGGCAGTTGAATCCGAAATTTGAAGAGAAT 2520
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      TACATTAAAGGCCTTGATTATGACCCTGATCGGGAAAGGGCACAAATGAAGAAAATGAAG 2580
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      AAACGCCTTAAGAGTGAGAAGAAGGGTGCAATGCGCGAACTGCGTAAAGATAATTATTTC 2640
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      CTGTCTGCTGTGAAAGAGAAGGAGAGGATAAAACAAGAGCAAGAGAGAGCTGAAAAGTAT 2700
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      GGAAAAGCCATGGCTTTCCTTCAGGAGCAGGAACATGCTTTTAAATCTGGACAGCTAGGG 2760
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      AAGGGCAGAAAAAGGAGGCGGTAACATTTTCTCCATATTTAGTGTGTGTAAATATATTGA 2820
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      TTATATTCCCCATGCTGTTCAGTTCACCATCTTTCTTGGGTACTGGAGATTTAGACACAG 2880
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      CGAATGGCCTTTGCATGCTCCATTTTAACTGCCTGTTGTAACTTCTAGCTTGTGGACACA 2940
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      CCGAAATACAAAAGTAGATGGTCAGAACTCCCTTGTTAGCAATATGGAGACGGAGCGTCA 3000
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      CTTGCATGAAAGCTACTTGGAAGAATGTTTTTGCAATCTCCCCAACAAAGCACCAACATG 3060
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      GCAATGGTTTTTTTATTTCTCTTGTATCGGGAAATGGATTGCTCTACTGTGTTATACTCC 3120
consensus_6641#1      ------------------------------------------------------------
                                                                                  

consensus_6641#0      TGCAATAGCAATTTTGATG--TATCAC-AGCCAAGAGTTTTT---GATGT--GTTCCCTT 3172
consensus_6641#1      -------------TGGATGGTTATCACTAGCCAAGAGTGTNTTTGGATGGTGGTTCCCTT 47
                                   * ****  ****** ********** * *   ****   ********

consensus_6641#0      TCCTTTTT---GCACTCGT-CAGATG-TACTGGAATGTAAACCAATGAAATCCTTAATGT 3227
consensus_6641#1      TGCCTTGTTTGGCACTCGTGCAGATGGTACTGGAATGTAAACCAATGAAATCCTTAATGT 107
                      * * ** *   ******** ****** *********************************

consensus_6641#0      AACATTACTTCCATTGTAAAAA------------------------------ 3249
consensus_6641#1      AACATTACTTCCATTTTATAGCCATTCCTTGCCATGTTGTTCAAAAAAAAAA 159
                      *************** ** *