cluster # 6752

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Oryza sativa
cluster # 6752 cluster # 6752 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_6752#0 length = 462 sequences # 4

consensusID : consensus_6752#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 462
fasta sequence

                              [GCACGAGTAAACCTGTGAGAGTCAATCTCTCTCTACTTTCCAAACATGGCTGTGGTGGAGTTGAAGGTTGGGATGCAC-TGCGACAGGTGCATCAAGGCGATCAAGAAGGCAATAAAAACGATCGATGATATGGAGAGTTATCAGCTAGAGACAGAGATAAACAAGGTCACCGTGACAGGAAATGTTACCCCAGATGAAGTCGTCAAGGCTCTGCAGAAGATTGGGAAGACGGCAACTAACTGGGGTGAAGACTGAAGTGTTCATCTTTAGCTAGTAGTATATATCAGCTGATGACTTGATGTCCTTAGTCCTTAGTCCTTTCTATGGTTACTTTGAGCTGTTTATACTGCAGATATACAGTAGTACTAAGGAACATAAAGTGGGTAAACTCGGCATTGCTTACTCTCCCTCAGTAGTTGATTAATGCAATGGATTATGCGTTGCCCTGTTGGATTAAAAAAA]

[+] EMBL OSA308374            [GCACGAGTAAACCTGTGAGAGTCAATCTCTCTCTACTTTCCAAACATGGCTGTGGTGGAGTTGAAGGTTGGGATGCAC TGCGACAGGTGCATCAAGGCGATCAAGAAGGCAATAAAAACGATCGATGATATGGAGAGTTATCAGCTAGAGACAGAGATAAACAAGGTCACCGTGACAGGAAATGTTACCCCAGATGAAGTCGTCAAGGCTCTGCAGAAGATTGGGAAGACGGCAACTAACTGGGGTGAAGACTGAAGTGTTCATCTTTAGCTAGTAGTATATATCAGCTGATGACTTGATGTCCTTAGTCCTTAGTCCTTTCTATGGTTACTTTGAGCTGTTTATACTGCAGATATACAGTAGTACTAAGGAACATAAAGTGGGTAAACTCGGCATTGCTTACTCTCCCTCAGTAGTTGATTAATGCAATGGATTATGCGTTGCCCTGTTGGATTAAAAAA ]
[+] EMBL OSC544               [   tgtGTAAACCTGTGAGAGTCAATCTCTCTCTACTTTCCAAACATGGCTGTGGTGGAGTTGAAGGTTGGGATGCAC TGCGACAGGTGCATCAAGGCGATCAAGAAGGCAATAAAAACGATCGATGATATGGAGAGTTATCAGCTAGAGACAGAGATAAACAAGGTCACCGTGACAGGAAATGTTACCCCAGATGAAGTCGTCAAGGCTCTGCAGAAGATTGGGAAGACGGCAACTAACTGGGGTGAAGACTGAAGTGTTCATCTTTAGCTAGTAGTATATATCAGCTGATGACTTGATGTCCTTAGTCCTTAGTCCTTTCTATGGTTACTTTGAGCTGTTTATACTGCAGATATACAGTAGTACTAAGGAACATAAAGTGGGTAAACTCGGCATTGCTTACTCTCCCTCAGTAGTTGATTAATGCAATGGATTATGCGTTGCCCTGTTGGATTAcct   ]
[+] EMBL CA305758             [          ACCTGTGAGAGTCAATCTCTCTCTACTTTCCAAACATGGCTGTGGTGGAGTTGAAGGTTGGGATGCACNTGCGACAGGTGCATCAAGGCGATCAAGAAGGCAATAAAAACGATCGATGATATGGAGAGTTATCAACTAGAGACAGAGATAAACAAGGTCACCGTGACAGGAAATGTTACCCCAGATGAAGTCGTCAAGGCTCTGCAGAAGATTGGGAAGACGGCAACTAACTGGGGTGAAGACTGAAGTGTTCATCTTTAGCTAGTAGTATATATCAGCTGATGACTTGATGTCCTTAGTCCTTAGTCCTTTCTATGGTTACTTTGAGCTGTTTATACTGCAGATATACA                                                                                                       ]
[+] EMBL AT003442             [                GAGAGTCAATCTCTCTCTACTTTCCAAACATGGCTGTGGTGGAGTTGAAGGTTGGGATGCAC TGCGACAGGTGCATCAAGGCGATCAAGAAGGCAATAAAAACGATCGATGATATGGAGAGTTATCAGCTAGAGACAGAGATAAACAAGGTCCCCGTGACAGGAAATGTTACCCCAGATGAAGTCGTCAAGGCTCTGCAGAAGATTGGGAAGACGGCAACTAACTGGGGTGAAGACTGAAGTGTTCATCTTTAGCTAGTAGTATATATCAGCTGATGACTTGATGTCCTTAGTCCTTAGTCCTTTCTATGGTTACTTTGAGCTGTTTATACTGCAGATATACAGTAGTACTAAGGAACATAAAGTGGGTAAACTCGGCATTGCTTACTCTCCCTCAGTAGTTGATTAATGCAATGGATTATGCGTTGCCCTGTTGGATTAAAAAAA]




>consensus_6752#0
GCACGAGTAAACCTGTGAGAGTCAATCTCTCTCTACTTTCCAAACATGGCTGTGGTGGAG
TTGAAGGTTGGGATGCACTGCGACAGGTGCATCAAGGCGATCAAGAAGGCAATAAAAACG
ATCGATGATATGGAGAGTTATCAGCTAGAGACAGAGATAAACAAGGTCACCGTGACAGGA
AATGTTACCCCAGATGAAGTCGTCAAGGCTCTGCAGAAGATTGGGAAGACGGCAACTAAC
TGGGGTGAAGACTGAAGTGTTCATCTTTAGCTAGTAGTATATATCAGCTGATGACTTGAT
GTCCTTAGTCCTTAGTCCTTTCTATGGTTACTTTGAGCTGTTTATACTGCAGATATACAG
TAGTACTAAGGAACATAAAGTGGGTAAACTCGGCATTGCTTACTCTCCCTCAGTAGTTGA
TTAATGCAATGGATTATGCGTTGCCCTGTTGGATTAAAAAAA

clustalw multiple alignements is not computed in this case