cluster # 6871

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Oryza sativa
cluster # 6871 cluster # 6871 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6871#0 length = 2847 sequences # 4
consensusID : consensus_6871#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2847
fasta sequence
                              [CCTTTGGCTAGCCGATTTTATGGATACTTGGTTGGAGAACATCTTTTTTCTGTATTAAATTTGTTTGGCTGCACTTTTCCAGAGTTCCAGTTTGCTATTCAGGTTTAAAGAAAAGTTGAGGAATTGTTCCTTATTCTGCAAAGGTGGTGCTTATAAGGAACCACTCCTCCTACCTTTGTTGACGGGCTAACACCAAATGGCCCAGCTGTTGCACCATCAGGACTCCGCGTTTTATGGGAAGGAACTCCATGGGCGCCGATGGAGCATTCTTCAGTTCTTTGGCTTCCGTCGCCGCCTGCGATCCACTAAGATGATCTCTGACAAGAAACAGAGTCAGGGAAAAGGCAGTGGTGGAAGTAGACGCCGAGGTTCATATGTTCCACTGAAAGATGAAGACACTAGTGTCATGGACGATGACAAACACACTGAGACAACAAAGAAAAACAAGTCTTCAAAAAAGAGTTCTGGTAAGGGAAGTTTGGGCTCCTTGATTCTAAAAAAGCTGTATGGAAAGGAAGGCCATAAAGAAAAGATGCTTCCTGTTGCACCGAAGCTACTCCGTACCCTTTCAATACATTACCTGGAAAGCAATGAGTATGTTCTTGATGGTGAATCTGCTTCCAATGGTGATGGTTCTTCACAAAGTATTATGCCAAATTCCACAGATACAAATATCCAAAATGCTACATTCAACACCCAGGATGGTTGCGATAATGATACAAGTTCTTCGCTTCTAAAGAGAGGTGACATTCATGTGAAACAAAGGAGCCACCGTAGCATTTCAATGGATGGAGTTCTTCATAAGGTCCCTTATGGACATAAGGCATCTGAAGATGTAATTAAAGAAGGACTTTCCCGGTCAGCCTCCGCCACATATGACAGGGATGGTTTGAAATCTTATACTGTAACTGCTGCAAAAAGACCTGTAAACCAAGGTTTTCGGCGTTCACGTTCCCTCACTGAATCATTGGAGAAATATTCTCACTTGCTGGATTCTATTTCAAGCAACCAGTCGAAGAGGACGCTGACAAGTTCAAAATCTACTAGGGATCATTCTTTGGATGCGCCTGCTGTGATGACTGGGTTGCAGAGTTTGGTTATGACTGCTGAAAATCTCGTGATCCCAGAACATGCCTTGGCACCATATGTTCCAGAGAGAATTATTGTGGATGGAGATGTGGATGCTGCTATGGATGAGATCTCTGGTCATAAGGATGCTGATGGCTCTGAAAATACTGTGTTAATCGAAGAGTACATCGTTGACAAAAAGTGTGGTGTTTCTGTGTCAACTGAAGCTAATATATGTACTCCCCCTTTACTTTCAGAAGTGATTGATATTTCACAGGGGCATGTAGCAACTTGTGATGACGATCAGGTTCACTCATCAACTGAAGATAATATGTGTACTGTTCATTCAAAATCAGAAGAAATTGATGTCCCAGAAGAACATGGAACAACTTGTGACGATGACCATACTAATTTGTCAACAGAAGCAGGTATGCATACTACTAAAGTTTCAGAAGACGGAAGGATTTCAGAAGAACATACAACAACTTCAGATGACAAACAAATTCATTCATCCGATGTTCTGAAGTCAAGAGAAGGTACTTTTTGTGTTCCTCGTCCCAGTCAAGAAATTGAAGCTG-AGATAAATCTAAGCTGTGAACAAGAAACTGATAGTCCAATGTCTGTTCTTGACATGACCTTCCCAGATGATCCTGCTAGTCCAGTGAAATATACAATCCTGGATGATTCGTCGTTGAAGCCAAGAGTCCTCCATTTAAGTGATACCGATGATTCAGCTGATATGGATCTCAATACCAGCACTTCCATGGAACTTTCAACTGCTGGCCTGGGTCACAAAAATGTTCAAGAAAGTGACTCTGATGAACTAAGCTCTCTCCAAGCAGATCCAAAGAATGAAGATGGGTTGATCTATGTGAAGAATATATTCATGAAATCAAGCTTCCGCAATGAAGTACTATTTGATGAATGGTGCTCACAGAACATTACAGTTCTCCAAGAAGAGGATTGCCAACACTACGAGGCTGCTGCCGCTGCATTTGATTTCACTGAGATGTCAGCTGATCAGCTACTTCTGTCTGACTTGACAAATGAAGTGTTGCTCGACATCTACAAGAAATATTCTGTTTCCAAGTCCTTGCTCTCCCGGTTTTCGTCTTTTGATAGACCGAAACCTGTGGGAAACCATGCCCTCAAGGAATTGTGGTCTAAAGTAAGCTGCCATCTGGATGAACAG-CCACAGTCCAGCATAGAAATTGACACAATTTTGTCGAATGATCTAT-CCAAGAACGATCACTGGGTGAATTTTCAGAGAGATGCTGAT-CACTTGGGGAACATGTTGGCAGACTTTGTGTTTGACAGGCTTCTGACAGAGTTCACTCTTCAGCTTGCAAAGTTTTGAGCCTAGCTAGTTTTTTTATTTTGCCCCTAAAAATTTTGTTGGTTTAGCTGTTCTATATGGTGGAATGCTATTATCCTCATGTATATATTAACATTCTTTCTGTTCTCTCCTTGAAGAGAACAAGGTTTGGAGGGGTGGTTG-TTACTTGTTAGGGCTTAGGAATTCAATTCATGTGCTGAAAGGTTTTGAAATTTATATATTGAGTGGGGTTGAAGGAGCAAAAATTTTGCACCAGTTTTTGGAATGCGTAATCTTGTAGAAGTAATGCTGGAAAAAAAATACCAGTCAACAAATGGTGAGGAGCAGGAATTCATGTATCTATCTGAAAGTTTCCTAGACTTCTATCATGTCAAAACTCTGATTCTGCCTAAAATTCCATGACAGAAGTGTAATAATAATAATATTATAGGTCAGAAAAAAAA]

[+] EMBL AK066489             [CCTTTGGCTAGCCGATTTTATGGATACTTGGTTGGAGAACATCTTTTTTCTGTATTAAATTTGTTTGGCTGCACTTTTCCAGAGTTCCAGTTTGCTATTCAGGTTTAAAGAAAAGTTGAGGAATTGTTCCTTATTCTGCAAAGGTGGTGCTTATAAGGAACCACTCCTCCTACCTTTGTTGACGGGCTAACACCAAATGGCCCAGCTGTTGCACCATCAGGACTCCGCGTTTTATGGGAAGGAACTCCATGGGCGCCGATGGAGCATTCTTCAGTTCTTTGGCTTCCGTCGCCGCCTGCGATCCACTAAGATGATCTCTGACAAGAAACAGAGTCAGGGAAAAGGCAGTGGTGGAAGTAGACGCCGAGGTTCATATGTTCCACTGAAAGATGAAGACACTAGTGTCATGGACGATGACAAACACACTGAGACAACAAAGAAAAACAAGTCTTCAAAAAAGAGTTCTGGTAAGGGAAGTTTGGGCTCCTTGATTCTAAAAAAGCTGTATGGAAAGGAAGGCCATAAAGAAAAGATGCTTCCTGTTGCACCGAAGCTACTCCGTACCCTTTCAATACATTACCTGGAAAGCAATGAGTATGTTCTTGATGGTGAATCTGCTTCCAATGGTGATGGTTCTTCACAAAGTATTATGCCAAATTCCACAGATACAAATATCCAAAATGCTACATTCAACACCCAGGATGGTTGCGATAATGATACAAGTTCTTCGCTTCTAAAGAGAGGTGACATTCATGTGAAACAAAGGAGCCACCGTAGCATTTCAATGGATGGAGTTCTTCATAAGGTCCCTTATGGACATAAGGCATCTGAAGATGTAATTAAAGAAGGACTTTCCCGGTCAGCCTCCGCCACATATGACAGGGATGGTTTGAAATCTTATACTGTAACTGCTGCAAAAAGACCTGTAAACCAAGGTTTTCGGCGTTCACGTTCCCTCACTGAATCATTGGAGAAATATTCTCACTTGCTGGATTCTATTTCAAGCAACCAGTCGAAGAGGACGCTGACAAGTTCAAAATCTACTAGGGATCATTCTTTGGATGCGCCTGCTGTGATGACTGGGTTGCAGAGTTTGGTTATGACTGCTGAAAATCTCGTGATCCCAGAACATGCCTTGGCACCATATGTTCCAGAGAGAATTATTGTGGATGGAGATGTGGATGCTGCTATGGATGAGATCTCTGGTCATAAGGATGCTGATGGCTCTGAAAATACTGTGTTAATCGAAGAGTACATCGTTGACAAAAAGTGTGGTGTTTCTGTGTCAACTGAAGCTAATATATGTACTCCCCCTTTACTTTCAGAAGTGATTGATATTTCACAGGGGCATGTAGCAACTTGTGATGACGATCAGGTTCACTCATCAACTGAAGATAATATGTGTACTGTTCATTCAAAATCAGAAGAAATTGATGTCCCAGAAGAACATGGAACAACTTGTGACGATGACCATACTAATTTGTCAACAGAAGCAGGTATGCATACTACTAAAGTTTCAGAAGACGGAAGGATTTCAGAAGAACATACAACAACTTCAGATGACAAACAAATTCATTCATCCGATGTTCTGAAGTCAAGAGAAGGTACTTTTTGTGTTCCTCGTCCCAGTCAAGAAATTGAAGCTG AGATAAATCTAAGCTGTGAACAAGAAACTGATAGTCCAATGTCTGTTCTTGACATGACCTTCCCAGATGATCCTGCTAGTCCAGTGAAATATACAATCCTGGATGATTCGTCGTTGAAGCCAAGAGTCCTCCATTTAAGTGATACCGATGATTCAGCTGATATGGATCTCAATACCAGCACTTCCATGGAACTTTCAACTGCTGGCCTGGGTCACAAAAATGTTCAAGAAAGTGACTCTGATGAACTAAGCTCTCTCCAAGCAGATCCAAAGAATGAAGATGGGTTGATCTATGTGAAGAATATATTCATGAAATCAAGCTTCCGCAATGAAGTACTATTTGATGAATGGTGCTCACAGAACATTACAGTTCTCCAAGAAGAGGATTGCCAACACTACGAGGCTGCTGCCGCTGCATTTGATTTCACTGAGATGTCAGCTGATCAGCTACTTCTGTCTGACTTGACAAATGAAGTGTTGCTCGACATCTACAAGAAATATTCTGTTTCCAAGTCCTTGCTCTCCCGGTTTTCGTCTTTTGATAGACCGAAACCTGTGGGAAACCATGCCCTCAAGGAATTGTGGTCTAAAGTAAGCTGCCATCTGGATGAACAG CCACAGTCCAGCATAGAAATTGACACAATTTTGTCGAATGATCTAT CCAAGAACGATCACTGGGTGAATTTTCAGAGAGATGCTGAT CACTTGGGGAACATGTTGGCAGACTTTGTGTTTGACAGGCTTCTGACAGAGTTCACTCTTCAGCTTGCAAAGTTTTGAGCCTAGCTAGTTTTTTTATTTTGCCCCTAAAAATTTTGTTGGTTTAGCTGTTCTATATGGTGGAATGCTATTATCCTCATGTATATATTAACATTCTTTCTGTTCTCTCCTTGAAGAGAACAAGGTTTGGAGGGGTGGTTG TTACTTGTTAGGGCTTAGGAATTCAATTCATGTGCTGAAAGGTTTTGAAATTTATATATTGAGTGGGG                                                                                                                                                                                                                     ]
[+] EMBL OSR18411A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAAATCAGAAGAAATTGATGTCCCAGAAGAACATGGAACAACTTGTGACGATGACCATACTAATTTGTCAACAGAAGCAGGTATGCATACTACTAAAGTTTCAGAAGACGGAAGGATTTCAGAAGAACATACAACAACTTCAGATGACAAACAAATTCATTCATCCGATGTTCTGAAGTCAAGAGAAGGTACTTTTTGTGTTCCTCGTCCCAGTCAAGAAATTGAAGCTGAAGATAAATCTAAGCTGTNAACAAGAAACTGATAGTCCAATGTCTGTTCTTGACATGACCTTCCCAGATGATCCTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AU031804             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTCAAGGAATTGTGGTCTAAAGTAAGCTGCCATCTGGATGAACAGCCCACANTCCAGCATAGAAATTGACACAATTTTGTCGAATGATCTATCCCAAGAACGATCACTGGGTGAATTTTCAGAGAGATGCTGATCCACTTGGGGAACATNTTGGCAGACTTTGTGTTTGACAGGCTTCTGACAGAGTTCACTCTTCAGCTTGCAAAGTTTTGAGCCTAGCTAGTTTTTTTATTTTGCCCCTAAAAATTTTGTTGGTTTAGCTGTTCTATATGGTGGAATGCTATTATCCTCATGTATATATTAACATTCTTTCTGTTCTCTCCTTGAAGAGAACAAGGTTTGGAGGGGTGGTTG TTACTTGTTAGGGCTTAGGAATTCAATTCATGTGCTGAAAGGTTTTGAAATTTATATATTGAGTGGGGTTGAAGGAGCAAAAA                                                                                                                                                                                                      ]
[+] EMBL BI803218             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GAAGAGAACAA GTTTGGAGGGGT GTTGTTTACTTGTTAGGGCTTAGGAATTCAATTCATGTGCTGAAAGGTTTTGAAATTTATATATTGAGTGGGGTTGAAGGAGCATTGTTTTTGCACCAGTTTTTGGAATGCGTAATCTTGTAGAAGTAATGCTGGAAAAAAAATACCAGTCAACAAATGGTGAGGAGCAGGAATTCATGTATCTATCTGAAAGTTTCCTAGACTTCTATCATGTCAAAACTCTGATTCTGCCTAAAATTCCATGACAGAAGTGTAATAATAATAATATTATAGGTCAGAAAAAAAA]




>consensus_6871#0
CCTTTGGCTAGCCGATTTTATGGATACTTGGTTGGAGAACATCTTTTTTCTGTATTAAAT
TTGTTTGGCTGCACTTTTCCAGAGTTCCAGTTTGCTATTCAGGTTTAAAGAAAAGTTGAG
GAATTGTTCCTTATTCTGCAAAGGTGGTGCTTATAAGGAACCACTCCTCCTACCTTTGTT
GACGGGCTAACACCAAATGGCCCAGCTGTTGCACCATCAGGACTCCGCGTTTTATGGGAA
GGAACTCCATGGGCGCCGATGGAGCATTCTTCAGTTCTTTGGCTTCCGTCGCCGCCTGCG
ATCCACTAAGATGATCTCTGACAAGAAACAGAGTCAGGGAAAAGGCAGTGGTGGAAGTAG
ACGCCGAGGTTCATATGTTCCACTGAAAGATGAAGACACTAGTGTCATGGACGATGACAA
ACACACTGAGACAACAAAGAAAAACAAGTCTTCAAAAAAGAGTTCTGGTAAGGGAAGTTT
GGGCTCCTTGATTCTAAAAAAGCTGTATGGAAAGGAAGGCCATAAAGAAAAGATGCTTCC
TGTTGCACCGAAGCTACTCCGTACCCTTTCAATACATTACCTGGAAAGCAATGAGTATGT
TCTTGATGGTGAATCTGCTTCCAATGGTGATGGTTCTTCACAAAGTATTATGCCAAATTC
CACAGATACAAATATCCAAAATGCTACATTCAACACCCAGGATGGTTGCGATAATGATAC
AAGTTCTTCGCTTCTAAAGAGAGGTGACATTCATGTGAAACAAAGGAGCCACCGTAGCAT
TTCAATGGATGGAGTTCTTCATAAGGTCCCTTATGGACATAAGGCATCTGAAGATGTAAT
TAAAGAAGGACTTTCCCGGTCAGCCTCCGCCACATATGACAGGGATGGTTTGAAATCTTA
TACTGTAACTGCTGCAAAAAGACCTGTAAACCAAGGTTTTCGGCGTTCACGTTCCCTCAC
TGAATCATTGGAGAAATATTCTCACTTGCTGGATTCTATTTCAAGCAACCAGTCGAAGAG
GACGCTGACAAGTTCAAAATCTACTAGGGATCATTCTTTGGATGCGCCTGCTGTGATGAC
TGGGTTGCAGAGTTTGGTTATGACTGCTGAAAATCTCGTGATCCCAGAACATGCCTTGGC
ACCATATGTTCCAGAGAGAATTATTGTGGATGGAGATGTGGATGCTGCTATGGATGAGAT
CTCTGGTCATAAGGATGCTGATGGCTCTGAAAATACTGTGTTAATCGAAGAGTACATCGT
TGACAAAAAGTGTGGTGTTTCTGTGTCAACTGAAGCTAATATATGTACTCCCCCTTTACT
TTCAGAAGTGATTGATATTTCACAGGGGCATGTAGCAACTTGTGATGACGATCAGGTTCA
CTCATCAACTGAAGATAATATGTGTACTGTTCATTCAAAATCAGAAGAAATTGATGTCCC
AGAAGAACATGGAACAACTTGTGACGATGACCATACTAATTTGTCAACAGAAGCAGGTAT
GCATACTACTAAAGTTTCAGAAGACGGAAGGATTTCAGAAGAACATACAACAACTTCAGA
TGACAAACAAATTCATTCATCCGATGTTCTGAAGTCAAGAGAAGGTACTTTTTGTGTTCC
TCGTCCCAGTCAAGAAATTGAAGCTGAGATAAATCTAAGCTGTGAACAAGAAACTGATAG
TCCAATGTCTGTTCTTGACATGACCTTCCCAGATGATCCTGCTAGTCCAGTGAAATATAC
AATCCTGGATGATTCGTCGTTGAAGCCAAGAGTCCTCCATTTAAGTGATACCGATGATTC
AGCTGATATGGATCTCAATACCAGCACTTCCATGGAACTTTCAACTGCTGGCCTGGGTCA
CAAAAATGTTCAAGAAAGTGACTCTGATGAACTAAGCTCTCTCCAAGCAGATCCAAAGAA
TGAAGATGGGTTGATCTATGTGAAGAATATATTCATGAAATCAAGCTTCCGCAATGAAGT
ACTATTTGATGAATGGTGCTCACAGAACATTACAGTTCTCCAAGAAGAGGATTGCCAACA
CTACGAGGCTGCTGCCGCTGCATTTGATTTCACTGAGATGTCAGCTGATCAGCTACTTCT
GTCTGACTTGACAAATGAAGTGTTGCTCGACATCTACAAGAAATATTCTGTTTCCAAGTC
CTTGCTCTCCCGGTTTTCGTCTTTTGATAGACCGAAACCTGTGGGAAACCATGCCCTCAA
GGAATTGTGGTCTAAAGTAAGCTGCCATCTGGATGAACAGCCACAGTCCAGCATAGAAAT
TGACACAATTTTGTCGAATGATCTATCCAAGAACGATCACTGGGTGAATTTTCAGAGAGA
TGCTGATCACTTGGGGAACATGTTGGCAGACTTTGTGTTTGACAGGCTTCTGACAGAGTT
CACTCTTCAGCTTGCAAAGTTTTGAGCCTAGCTAGTTTTTTTATTTTGCCCCTAAAAATT
TTGTTGGTTTAGCTGTTCTATATGGTGGAATGCTATTATCCTCATGTATATATTAACATT
CTTTCTGTTCTCTCCTTGAAGAGAACAAGGTTTGGAGGGGTGGTTGTTACTTGTTAGGGC
TTAGGAATTCAATTCATGTGCTGAAAGGTTTTGAAATTTATATATTGAGTGGGGTTGAAG
GAGCAAAAATTTTGCACCAGTTTTTGGAATGCGTAATCTTGTAGAAGTAATGCTGGAAAA
AAAATACCAGTCAACAAATGGTGAGGAGCAGGAATTCATGTATCTATCTGAAAGTTTCCT
AGACTTCTATCATGTCAAAACTCTGATTCTGCCTAAAATTCCATGACAGAAGTGTAATAA
TAATAATATTATAGGTCAGAAAAAAAA
clustalw multiple alignements is not computed in this case