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Oryza sativa
cluster # 6933 cluster # 6933       Sequences # 4       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_6933#0 length = 3911 sequences # 3  
 consensus_6933#1 length = 431 sequences # 1  
consensusID : consensus_6933#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3911
fasta sequence 
                              [AAGCTGAAAGGCGCAAAAAGCTTCCAGAAGCGTCCCCAAAACCGCCCACGGCGATCGGGGGCGCGCGCGCAGCCGGCGGCGGCGAAGAGGCTGCGAGGTCTGGCCTTCTTCCCCTGCTAGATCGCCGGTCGACGGAGATGGAGATGGACCACGCGGCGGCGGAGAAGGCGCGGTGGCGCTTCTCGGACGGCGGCGTCACCGACCTCCTGCAAGCCCGAAGTCTCCACGGCACCGCTGACATTAATAAGAGAGTGCAATTCCATTCTTCTCTAGTACAAAGGCTTGCTTTGGAGAAGGAAATGGAGGGTCACCTAGGTTGTGTCAATGCTATTGCATGGAATTCAAAGGGCTCACTTCTGCTATCAGGTTCAGATGACACTAGAATCGGCATCTGGAGTTATGCTAATCGAGAGTTGTTGCATGACATTGATACGGGTCATTCAGCAAACATATTTTGCACAAAATTTGTCCCTGAAACATCTGATGAAGTAATAGTCTCAGGAGCAGGAGATGCAGAGGTTCGTGTTTTTAATTTGTCCCGTTTAAGTGGAAAAAGGCCTGTAGAAATTTCTATGGAACCATCAGCAGTTTACCAATGCCACTCAAGGAGGATCAAGAAATTAGCTGTTGAAATTGGTAACCCTAATATAGTCTGGAGTGCAAGTGAGGATGGAACTCTAAGACAGCATGATTTTCGGGAGTGCAGTTCCTGTCCTCGTGCAAGATCTACTAATCAGGAATGCCGTAATGTGCTTCTAGATCTACGATGGGGAGCAAAGAAATCTTTAGCTGATATTCCCAGACAGCCATTGGCACTGAAGTCTTGTGATATCAGCACTGTTCGTCCCCATCAGCTCCTTGTTGGTGGAAGTGATGCATTTGCACGACTGTATGATAGGAGAATGCTTCCACCATTGAGCACATGCCAAACAAAAAAGGAACCACCTCCATGTATTAAAATGTTCTGTCCAATGCACCTTGCTGATACTGTGAGTTCCCTGTTCTTGAGTGTATTGTTATTGTCCCAACTGTGTATGGTAAATATGGTAGCAGTTGTTGCTGGGTATACTCCCTCGTGTCATAAAATGAGTAGCATTTTGTACCATCAACGCAGTTTCCAAAACACACATTTGACAACTAGTTTCTGTTATATGGTTTTATGAAACATAGTAAAATTTAAGACAAATCAAGGATATCAATTTCATACTTCCAATCTACACAAGTGAATTTGACAGCTAAATTTTATAAAGTTCGACCACATGTTCCCCAAAACATTTATTTTTTTACTGGATGCAATACCATATATATGCGATTTGCTGTGCTGGCTATATACATTTTATATGCTGACTCAAAGTTGACCAAATTAAATGTAAATCTTGAATTTAAAGTTTAAAAATTCAGGGTAGGAGATTGATAGAACACATGAAGCTTTTTTGGCTGTTTTTCTTTAGCATGAGAATTTTCATGTAATAGTCAGTGTTGATAATTCTGTTATTGCGAGCAGTTTTATGATTTGTTACATGTGCTTTATGGATAACCTTGTATTGCACGGTCATGGATAAATTTTAAATGTGCTTTTCAACATAAACTACTACTTCTGGAATATTTGTATTTTTTCCCAGAAAAATTGGCCTATAAAGCTTAAAGCATTCAAGCTAGAGTAGGCAATTTTGTTCTAGTTTAAGAATTTTGTTATTTCTGAAGCAACTCGTTCCTTCAATATCAATTGACATTTGGCCTACGTTGTAACCAGAGGAAGTCAAATTTGCATCTAACTCATGTTGCGTTCAGCCCAAATGGTAAGGAGGTTCTGTTGAGCTACAGTGGTGAACATGTATATCTATTTGATGTTGACCTAGAAAATACGAGTTCTGTGAGATACACAGCAGACAATGTACAGGAGCAATTATGTCTACCCCCTTTTAACAAAGAGCCAGCAAAGTTAATTTCAAAACAACAGAAGTTTCCTGTAAACAGAGCTTCAAGAAATGTGTGTAGGGTGAGTTGTGCTCTCTCTCTCTCTCTCTGCAATTCAGACCACACTGTTTGCTTGATCTGCTGGACATGTTGAACCGCTTTGCCTTTAATGGCACCCGTTTCAGGTAGATACGTTCAAGAAACTTATGCAAGTTGCAACAAAATCTCTTGAGATGGGCACTAACTTGATGCTTGGGGTTGAAGCATGCTCTACAATACTTCTGGCAGTGGACCATAATATTGATGATAACATGAAGCATGATTGCTTGTGTACTCGGGCAGGATTGTATCTAAAGAGGAGGTGGAAAAATGATGTATACATGGCTATAAGGGATTGCAACAGTGCAAGGTGTATAGATTCCAGATCATTTCAGGCGCATCTGTATATGGCAGAAGCACTATTACAGTTAGGAAGGCTGAAAGAGGCATCTGAATATGTGGATGCATTAAATACTATTGTTCCACCTTATTCTCAGTCAGTGAAGCAAGTGGAAAATATAAAGGAGCAGCTTTTTGCAGCTGAACTTGAGAAGAATAAAAAGGATCAAGTAGGGAATACCTACACTGATGCACGACATGGGCGGTTACGCTCATTAAGTGATCTACTGTTTAGATCAGATGCCAGTGGCTCGTCATCACAGGAGGGTCGAGAAGATTCAGATTATGATGATGAAATGGAGTTGGACTTTGAAACATCAGCATCAGGTGATGAAAGCCGTGATAGTGATCCAGGTCTTGTCCGGGGTAGTTTAAGTTTAAGATTTCACAGAAGAGATAGTCAAACTGACGAACATTCTGGTGAAAATGGATCAGCTGAGTCCACTCAGAATGGTGATTCTGCCTATCAGCCAGAAGTTGCCGTTGACATGAAGCAAAGATATGTTGCACACTGCAATGTGGGGACAGATATAAAGCAAGCTAGCTTTCTCGGTGAACAAGGGGAGTTTATTGCTAGCGGAAGTGATGATGGTAGATGGTTCATATGGGAGAAACGAACTGGAAGGTTGATTAAAATGCTTGCAGGGGATGGAGCCGTTGTGAACTGTATACAATCTCATCCATATGACTGTGCTGTTGCAACAAGTGGTATAGATAACACAATAAAGTTATGGACACCGGATGCGAACGCTACATCTATGATTGCTGGACCCGAAATTGATGTATCAAGTGTCATAGAAAACAATCAGAGGAAGCTCTCCCGGAACCGTGAAATTTTGCTACCTTTCGAATTTTTGGAACGATTTCGAATGCATGAGTTTGGTGAAGGAAGTTTACATCCTTTGGAGTGTGCACAGAGCTGATTTCCTATTGCTTAAGTTTTGCTGAGCTTACGGGAAAAAGAAGGAAATGCATGGAAGGTGACTTCATCCAAGAGATAAGCTGTTCATGTTTTGATAGGAGTGAAACTGCAAGGCCTTGCTGCAGTTTTAGGCTTGGATTATTGATTAATGTTGGCACACCTCCTTATGCGGTGTCTAAGCAGGCGTGTTGTTGCTTGAGATGAGAATAAACAGCTAAATGCTGTTGCCTGCTGGTTGGGTATAATGATTGATCTCTGGTACGCAATGTATATCCATTCCCTTGTACAGATTGTAGGGAGGGAAACAATCGAAGAGCCATAGCAGAGGCTTAAGCCATAATGTTCCTCTCTTTGGCCCGGAGGGCAACGCCATTTCAGGTCGGGAAGCTTCGGTTCCCGTATTATCCGGTATTGCAGTATAGGATATATTTCCCTACACTAGCACAACTTTTGTGTGGCCGTGACCGGTTGTGTTCAGTTGCCCTTGCATGCGTCCGCTCCCAAATGGTTCAGCAATTGACTTGTAAAAACTGGACTTGG-CCTACGTGAATCTTCATATTGCTTTCTTTGATGT-ATATGTGGGTGTATGTGCAGTCTATGTATTCCGTAATAACAGATGCGCTGGAAAAAAAAA]

[+] EMBL AK106710             [AAGCTGAAAGGCGCAAAAAGCTTCCAGAAGCGTCCCCAAAACCGCCCACGGCGATCGGGGGCGCGCGCGCAGCCGGCGGCGGCGAAGAGGCTGCGAGGTCTGGCCTTCTTCCCCTGCTAGATCGCCGGTCGACGGAGATGGAGATGGACCACGCGGCGGCGGAGAAGGCGCGGTGGCGCTTCTCGGACGGCGGCGTCACCGACCTCCTGCAAGCCCGAAGTCTCCACGGCACCGCTGACATTAATAAGAGAGTGCAATTCCATTCTTCTCTAGTACAAAGGCTTGCTTTGGAGAAGGAAATGGAGGGTCACCTAGGTTGTGTCAATGCTATTGCATGGAATTCAAAGGGCTCACTTCTGCTATCAGGTTCAGATGACACTAGAATCGGCATCTGGAGTTATGCTAATCGAGAGTTGTTGCATGACATTGATACGGGTCATTCAGCAAACATATTTTGCACAAAATTTGTCCCTGAAACATCTGATGAAGTAATAGTCTCAGGAGCAGGAGATGCAGAGGTTCGTGTTTTTAATTTGTCCCGTTTAAGTGGAAAAAGGCCTGTAGAAATTTCTATGGAACCATCAGCAGTTTACCAATGCCACTCAAGGAGGATCAAGAAATTAGCTGTTGAAATTGGTAACCCTAATATAGTCTGGAGTGCAAGTGAGGATGGAACTCTAAGACAGCATGATTTTCGGGAGTGCAGTTCCTGTCCTCGTGCAAGATCTACTAATCAGGAATGCCGTAATGTGCTTCTAGATCTACGATGGGGAGCAAAGAAATCTTTAGCTGATATTCCCAGACAGCCATTGGCACTGAAGTCTTGTGATATCAGCACTGTTCGTCCCCATCAGCTCCTTGTTGGTGGAAGTGATGCATTTGCACGACTGTATGATAGGAGAATGCTTCCACCATTGAGCACATGCCAAACAAAAAAGGAACCACCTCCATGTATTAAAATGTTCTGTCCAATGCACCTTGCTGATACTGTGAGTTCCCTGTTCTTGAGTGTATTGTTATTGTCCCAACTGTGTATGGTAAATATGGTAGCAGTTGTTGCTGGGTATACTCCCTCGTGTCATAAAATGAGTAGCATTTTGTACCATCAACGCAGTTTCCAAAACACACATTTGACAACTAGTTTCTGTTATATGGTTTTATGAAACATAGTAAAATTTAAGACAAATCAAGGATATCAATTTCATACTTCCAATCTACACAAGTGAATTTGACAGCTAAATTTTATAAAGTTCGACCACATGTTCCCCAAAACATTTATTTTTTTACTGGATGCAATACCATATATATGCGATTTGCTGTGCTGGCTATATACATTTTATATGCTGACTCAAAGTTGACCAAATTAAATGTAAATCTTGAATTTAAAGTTTAAAAATTCAGGGTAGGAGATTGATAGAACACATGAAGCTTTTTTGGCTGTTTTTCTTTAGCATGAGAATTTTCATGTAATAGTCAGTGTTGATAATTCTGTTATTGCGAGCAGTTTTATGATTTGTTACATGTGCTTTATGGATAACCTTGTATTGCACGGTCATGGATAAATTTTAAATGTGCTTTTCAACATAAACTACTACTTCTGGAATATTTGTATTTTTTCCCAGAAAAATTGGCCTATAAAGCTTAAAGCATTCAAGCTAGAGTAGGCAATTTTGTTCTAGTTTAAGAATTTTGTTATTTCTGAAGCAACTCGTTCCTTCAATATCAATTGACATTTGGCCTACGTTGTAACCAGAGGAAGTCAAATTTGCATCTAACTCATGTTGCGTTCAGCCCAAATGGTAAGGAGGTTCTGTTGAGCTACAGTGGTGAACATGTATATCTATTTGATGTTGACCTAGAAAATACGAGTTCTGTGAGATACACAGCAGACAATGTACAGGAGCAATTATGTCTACCCCCTTTTAACAAAGAGCCAGCAAAGTTAATTTCAAAACAACAGAAGTTTCCTGTAAACAGAGCTTCAAGAAATGTGTGTAGGGTGAGTTGTGCTCTCTCTCTCTCTCTCTGCAATTCAGACCACACTGTTTGCTTGATCTGCTGGACATGTTGAACCGCTTTGCCTTTAATGGCACCCGTTTCAGGTAGATACGTTCAAGAAACTTATGCAAGTTGCAACAAAATCTCTTGAGATGGGCACTAACTTGATGCTTGGGGTTGAAGCATGCTCTACAATACTTCTGGCAGTGGACCATAATATTGATGATAACATGAAGCATGATTGCTTGTGTACTCGGGCAGGATTGTATCTAAAGAGGAGGTGGAAAAATGATGTATACATGGCTATAAGGGATTGCAACAGTGCAAGGTGTATAGATTCCAGATCATTTCAGGCGCATCTGTATATGGCAGAAGCACTATTACAGTTAGGAAGGCTGAAAGAGGCATCTGAATATGTGGATGCATTAAATACTATTGTTCCACCTTATTCTCAGTCAGTGAAGCAAGTGGAAAATATAAAGGAGCAGCTTTTTGCAGCTGAACTTGAGAAGAATAAAAAGGATCAAGTAGGGAATACCTACACTGATGCACGACATGGGCGGTTACGCTCATTAAGTGATCTACTGTTTAGATCAGATGCCAGTGGCTCGTCATCACAGGAGGGTCGAGAAGATTCAGATTATGATGATGAAATGGAGTTGGACTTTGAAACATCAGCATCAGGTGATGAAAGCCGTGATAGTGATCCAGGTCTTGTCCGGGGTAGTTTAAGTTTAAGATTTCACAGAAGAGATAGTCAAACTGACGAACATTCTGGTGAAAATGGATCAGCTGAGTCCACTCAGAATGGTGATTCTGCCTATCAGCCAGAAGTTGCCGTTGACATGAAGCAAAGATATGTTGCACACTGCAATGTGGGGACAGATATAAAGCAAGCTAGCTTTCTCGGTGAACAAGGGGAGTTTATTGCTAGCGGAAGTGATGATGGTAGATGGTTCATATGGGAGAAACGAACTGGAAGGTTGATTAAAATGCTTGCAGGGGATGGAGCCGTTGTGAACTGTATACAATCTCATCCATATGACTGTGCTGTTGCAACAAGTGGTATAGATAACACAATAAAGTTATGGACACCGGATGCGAACGCTACATCTATGATTGCTGGACCCGAAATTGATGTATCAAGTGTCATAGAAAACAATCAGAGGAAGCTCTCCCGGAACCGTGAAATTTTGCTACCTTTCGAATTTTTGGAACGATTTCGAATGCATGAGTTTGGTGAAGGAAGTTTACATCCTTTGGAGTGTGCACAGAGCTGATTTCCTATTGCTTAAGTTTTGCTGAGCTTACGGGAAAAAGAAGGAAATGCATGGAAGGTGACTTCATCCAAGAGATAAGCTGTTCATGTTTTGATAGGAGTGAAACTGCAAGGCCTTGCTGCAGTTTTAGGCTTGCATTATTGATTAATGTTGGCACACCTCCTTATGCGGTGTCTAAGCAGGCGTGTTGTTGCTTGAGATGAGAATAAACAGCTAAATGCTGTTGCCTGCT                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL BI807484             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGGAAGGTGACTTCATCCAAGAGATAAGCTGTTCATGTTTTGATAGGAGTGAAACTGCAAGGCCTTGCTGCAGTTTTAGGCTTGGATTATTGATTAATGTTGGCACACCTCCTTATGCGGTGTCTAAGCAGGCGTGTTGTTGCTTGAGATGAGAATAAACAGCTAAATGCTGTTGCCTGCTGGTTGGGTATAATGATTGATCTCTGGTACGCAATGTATATCCATTCCCTTGTACAGATTGTAGGGAGGGAAACAATCGAAGAGCCATAGCAGAGGCTTAAGCCATAATGTTCCTCTCTTTGGCCCGGAGGGCAACGCCATTTCAGGTCGGGAAGCTTCGGTTCCCGTATTATCCGGTATTGCAGTATAGGATATATTTCCCTACACTAGCACAACTTTTGTGTGGCCGTGACCGGTTGTGTTCAGTTGCCCTTGCATGCGTCCGCTCCCAAATGGTTCAGCAATTGACTTGTAAAAACTGGACTTGG CCTACGTGAATCTTCATATTGCTTTCTTTGATGT ATATGTGGGTGTATGTGCAGTCTATGTATTCCGTAATAACAGATGCGCTGGAAAAAAAAA]
[-] EMBL BI807505             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGGAAGGTGACTTCATCCAAGAGATAAGCTGTTCATG TTTGATAGGAGTGAAACTGCAAGGCCTTGCTGCAGTTTTAGGCTTGGATTATTGATTAATGTTGGCACACCTCCTTATGCGGTGTCTAAGCAGGCGTG TGTTGCTTGAGATGAGAATAAACAGCTAAATGCTGTTGCCTGCTGGTTGGGTATAATGATTGATCTCTGGTACGCAATGTATATCCATTCCCTTGTACAGA TGTAGGGAGGCAAACAATCGAAGAGCCATAGCAGAGGCTTAAGCCATAATGTTCCTCTCTTTGGCCCGGAGGGCAACGCCATTTCAGGTCGGGAAGCTTCGGTTCCCGTATTATCCGGTATTGC GTATAGGATATATTTCCCTACACTAGCACAA TTTTGTGTGG CGTGACCGGTTGTGTTCAGTTG CCTTGCATGCGTCCG T CCAAATGGTTCAGCAATTGACTTGTAAAAACTGGACTTGGCCCTACGTGAATCTTCATATTGCTTTCTTTGATGTAATAGGTGGGTGTATGTt                                           ]




>consensus_6933#0
AAGCTGAAAGGCGCAAAAAGCTTCCAGAAGCGTCCCCAAAACCGCCCACGGCGATCGGGG
GCGCGCGCGCAGCCGGCGGCGGCGAAGAGGCTGCGAGGTCTGGCCTTCTTCCCCTGCTAG
ATCGCCGGTCGACGGAGATGGAGATGGACCACGCGGCGGCGGAGAAGGCGCGGTGGCGCT
TCTCGGACGGCGGCGTCACCGACCTCCTGCAAGCCCGAAGTCTCCACGGCACCGCTGACA
TTAATAAGAGAGTGCAATTCCATTCTTCTCTAGTACAAAGGCTTGCTTTGGAGAAGGAAA
TGGAGGGTCACCTAGGTTGTGTCAATGCTATTGCATGGAATTCAAAGGGCTCACTTCTGC
TATCAGGTTCAGATGACACTAGAATCGGCATCTGGAGTTATGCTAATCGAGAGTTGTTGC
ATGACATTGATACGGGTCATTCAGCAAACATATTTTGCACAAAATTTGTCCCTGAAACAT
CTGATGAAGTAATAGTCTCAGGAGCAGGAGATGCAGAGGTTCGTGTTTTTAATTTGTCCC
GTTTAAGTGGAAAAAGGCCTGTAGAAATTTCTATGGAACCATCAGCAGTTTACCAATGCC
ACTCAAGGAGGATCAAGAAATTAGCTGTTGAAATTGGTAACCCTAATATAGTCTGGAGTG
CAAGTGAGGATGGAACTCTAAGACAGCATGATTTTCGGGAGTGCAGTTCCTGTCCTCGTG
CAAGATCTACTAATCAGGAATGCCGTAATGTGCTTCTAGATCTACGATGGGGAGCAAAGA
AATCTTTAGCTGATATTCCCAGACAGCCATTGGCACTGAAGTCTTGTGATATCAGCACTG
TTCGTCCCCATCAGCTCCTTGTTGGTGGAAGTGATGCATTTGCACGACTGTATGATAGGA
GAATGCTTCCACCATTGAGCACATGCCAAACAAAAAAGGAACCACCTCCATGTATTAAAA
TGTTCTGTCCAATGCACCTTGCTGATACTGTGAGTTCCCTGTTCTTGAGTGTATTGTTAT
TGTCCCAACTGTGTATGGTAAATATGGTAGCAGTTGTTGCTGGGTATACTCCCTCGTGTC
ATAAAATGAGTAGCATTTTGTACCATCAACGCAGTTTCCAAAACACACATTTGACAACTA
GTTTCTGTTATATGGTTTTATGAAACATAGTAAAATTTAAGACAAATCAAGGATATCAAT
TTCATACTTCCAATCTACACAAGTGAATTTGACAGCTAAATTTTATAAAGTTCGACCACA
TGTTCCCCAAAACATTTATTTTTTTACTGGATGCAATACCATATATATGCGATTTGCTGT
GCTGGCTATATACATTTTATATGCTGACTCAAAGTTGACCAAATTAAATGTAAATCTTGA
ATTTAAAGTTTAAAAATTCAGGGTAGGAGATTGATAGAACACATGAAGCTTTTTTGGCTG
TTTTTCTTTAGCATGAGAATTTTCATGTAATAGTCAGTGTTGATAATTCTGTTATTGCGA
GCAGTTTTATGATTTGTTACATGTGCTTTATGGATAACCTTGTATTGCACGGTCATGGAT
AAATTTTAAATGTGCTTTTCAACATAAACTACTACTTCTGGAATATTTGTATTTTTTCCC
AGAAAAATTGGCCTATAAAGCTTAAAGCATTCAAGCTAGAGTAGGCAATTTTGTTCTAGT
TTAAGAATTTTGTTATTTCTGAAGCAACTCGTTCCTTCAATATCAATTGACATTTGGCCT
ACGTTGTAACCAGAGGAAGTCAAATTTGCATCTAACTCATGTTGCGTTCAGCCCAAATGG
TAAGGAGGTTCTGTTGAGCTACAGTGGTGAACATGTATATCTATTTGATGTTGACCTAGA
AAATACGAGTTCTGTGAGATACACAGCAGACAATGTACAGGAGCAATTATGTCTACCCCC
TTTTAACAAAGAGCCAGCAAAGTTAATTTCAAAACAACAGAAGTTTCCTGTAAACAGAGC
TTCAAGAAATGTGTGTAGGGTGAGTTGTGCTCTCTCTCTCTCTCTCTGCAATTCAGACCA
CACTGTTTGCTTGATCTGCTGGACATGTTGAACCGCTTTGCCTTTAATGGCACCCGTTTC
AGGTAGATACGTTCAAGAAACTTATGCAAGTTGCAACAAAATCTCTTGAGATGGGCACTA
ACTTGATGCTTGGGGTTGAAGCATGCTCTACAATACTTCTGGCAGTGGACCATAATATTG
ATGATAACATGAAGCATGATTGCTTGTGTACTCGGGCAGGATTGTATCTAAAGAGGAGGT
GGAAAAATGATGTATACATGGCTATAAGGGATTGCAACAGTGCAAGGTGTATAGATTCCA
GATCATTTCAGGCGCATCTGTATATGGCAGAAGCACTATTACAGTTAGGAAGGCTGAAAG
AGGCATCTGAATATGTGGATGCATTAAATACTATTGTTCCACCTTATTCTCAGTCAGTGA
AGCAAGTGGAAAATATAAAGGAGCAGCTTTTTGCAGCTGAACTTGAGAAGAATAAAAAGG
ATCAAGTAGGGAATACCTACACTGATGCACGACATGGGCGGTTACGCTCATTAAGTGATC
TACTGTTTAGATCAGATGCCAGTGGCTCGTCATCACAGGAGGGTCGAGAAGATTCAGATT
ATGATGATGAAATGGAGTTGGACTTTGAAACATCAGCATCAGGTGATGAAAGCCGTGATA
GTGATCCAGGTCTTGTCCGGGGTAGTTTAAGTTTAAGATTTCACAGAAGAGATAGTCAAA
CTGACGAACATTCTGGTGAAAATGGATCAGCTGAGTCCACTCAGAATGGTGATTCTGCCT
ATCAGCCAGAAGTTGCCGTTGACATGAAGCAAAGATATGTTGCACACTGCAATGTGGGGA
CAGATATAAAGCAAGCTAGCTTTCTCGGTGAACAAGGGGAGTTTATTGCTAGCGGAAGTG
ATGATGGTAGATGGTTCATATGGGAGAAACGAACTGGAAGGTTGATTAAAATGCTTGCAG
GGGATGGAGCCGTTGTGAACTGTATACAATCTCATCCATATGACTGTGCTGTTGCAACAA
GTGGTATAGATAACACAATAAAGTTATGGACACCGGATGCGAACGCTACATCTATGATTG
CTGGACCCGAAATTGATGTATCAAGTGTCATAGAAAACAATCAGAGGAAGCTCTCCCGGA
ACCGTGAAATTTTGCTACCTTTCGAATTTTTGGAACGATTTCGAATGCATGAGTTTGGTG
AAGGAAGTTTACATCCTTTGGAGTGTGCACAGAGCTGATTTCCTATTGCTTAAGTTTTGC
TGAGCTTACGGGAAAAAGAAGGAAATGCATGGAAGGTGACTTCATCCAAGAGATAAGCTG
TTCATGTTTTGATAGGAGTGAAACTGCAAGGCCTTGCTGCAGTTTTAGGCTTGGATTATT
GATTAATGTTGGCACACCTCCTTATGCGGTGTCTAAGCAGGCGTGTTGTTGCTTGAGATG
AGAATAAACAGCTAAATGCTGTTGCCTGCTGGTTGGGTATAATGATTGATCTCTGGTACG
CAATGTATATCCATTCCCTTGTACAGATTGTAGGGAGGGAAACAATCGAAGAGCCATAGC
AGAGGCTTAAGCCATAATGTTCCTCTCTTTGGCCCGGAGGGCAACGCCATTTCAGGTCGG
GAAGCTTCGGTTCCCGTATTATCCGGTATTGCAGTATAGGATATATTTCCCTACACTAGC
ACAACTTTTGTGTGGCCGTGACCGGTTGTGTTCAGTTGCCCTTGCATGCGTCCGCTCCCA
AATGGTTCAGCAATTGACTTGTAAAAACTGGACTTGGCCTACGTGAATCTTCATATTGCT
TTCTTTGATGTATATGTGGGTGTATGTGCAGTCTATGTATTCCGTAATAACAGATGCGCT
GGAAAAAAAAA

consensusID : consensus_6933#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 431
fasta sequence 
                              [GGTATAATGATTGATCTCTGGTACGCCATGGTATATCCCTTCCCTTGTACAGATTGTAGGGAGCCAACCATCGAAGAGCCATAGCAGAGGCTTAAGCCATAATGTTCCTCTCTTTGGCCCGGAGGGCAACGCCCTTTCAGGTCGGGAAGCTTCGGTTCCCGTATTATCCGGTATTGCGTATAGGATATATTTCCCTACACTGAGCACACACTTTTTGTGTGNCCGTGACCGGTGTGNGTTCAGTTGCCCTTGCATNGCGTCCGCTCCCCAATGGTTCAGCCAATTGACTTGTAAAAACTGGACTTGGCCCTACGTGAATCTTCATATTGCCTTTCTTTGATTGTAATAATGTGGGTGTATGCTTGCGTCTATGTATTCCGTAATAAAAGATCCCNCTGGAGATATGGTACTCCCGGATGAAAAAAAAAAAA]

[+] EMBL BQ907329             [GGTATAATGATTGATCTCTGGTACGCCATGGTATATCCCTTCCCTTGTACAGATTGTAGGGAGCCAACCATCGAAGAGCCATAGCAGAGGCTTAAGCCATAATGTTCCTCTCTTTGGCCCGGAGGGCAACGCCCTTTCAGGTCGGGAAGCTTCGGTTCCCGTATTATCCGGTATTGCGTATAGGATATATTTCCCTACACTGAGCACACACTTTTTGTGTGNCCGTGACCGGTGTGNGTTCAGTTGCCCTTGCATNGCGTCCGCTCCCCAATGGTTCAGCCAATTGACTTGTAAAAACTGGACTTGGCCCTACGTGAATCTTCATATTGCCTTTCTTTGATTGTAATAATGTGGGTGTATGCTTGCGTCTATGTATTCCGTAATAAAAGATCCCNCTGGAGATATGGTACTCCCGGATGAAAAAAAAAAAA]




>consensus_6933#1
GGTATAATGATTGATCTCTGGTACGCCATGGTATATCCCTTCCCTTGTACAGATTGTAGG
GAGCCAACCATCGAAGAGCCATAGCAGAGGCTTAAGCCATAATGTTCCTCTCTTTGGCCC
GGAGGGCAACGCCCTTTCAGGTCGGGAAGCTTCGGTTCCCGTATTATCCGGTATTGCGTA
TAGGATATATTTCCCTACACTGAGCACACACTTTTTGTGTGNCCGTGACCGGTGTGNGTT
CAGTTGCCCTTGCATNGCGTCCGCTCCCCAATGGTTCAGCCAATTGACTTGTAAAAACTG
GACTTGGCCCTACGTGAATCTTCATATTGCCTTTCTTTGATTGTAATAATGTGGGTGTAT
GCTTGCGTCTATGTATTCCGTAATAAAAGATCCCNCTGGAGATATGGTACTCCCGGATGA
AAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_6933#0      AAGCTGAAAGGCGCAAAAAGCTTCCAGAAGCGTCCCCAAAACCGCCCACGGCGATCGGGG 60
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      GCGCGCGCGCAGCCGGCGGCGGCGAAGAGGCTGCGAGGTCTGGCCTTCTTCCCCTGCTAG 120
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      ATCGCCGGTCGACGGAGATGGAGATGGACCACGCGGCGGCGGAGAAGGCGCGGTGGCGCT 180
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      TCTCGGACGGCGGCGTCACCGACCTCCTGCAAGCCCGAAGTCTCCACGGCACCGCTGACA 240
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      TTAATAAGAGAGTGCAATTCCATTCTTCTCTAGTACAAAGGCTTGCTTTGGAGAAGGAAA 300
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      TGGAGGGTCACCTAGGTTGTGTCAATGCTATTGCATGGAATTCAAAGGGCTCACTTCTGC 360
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      TATCAGGTTCAGATGACACTAGAATCGGCATCTGGAGTTATGCTAATCGAGAGTTGTTGC 420
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      ATGACATTGATACGGGTCATTCAGCAAACATATTTTGCACAAAATTTGTCCCTGAAACAT 480
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      CTGATGAAGTAATAGTCTCAGGAGCAGGAGATGCAGAGGTTCGTGTTTTTAATTTGTCCC 540
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      GTTTAAGTGGAAAAAGGCCTGTAGAAATTTCTATGGAACCATCAGCAGTTTACCAATGCC 600
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      ACTCAAGGAGGATCAAGAAATTAGCTGTTGAAATTGGTAACCCTAATATAGTCTGGAGTG 660
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      CAAGTGAGGATGGAACTCTAAGACAGCATGATTTTCGGGAGTGCAGTTCCTGTCCTCGTG 720
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      CAAGATCTACTAATCAGGAATGCCGTAATGTGCTTCTAGATCTACGATGGGGAGCAAAGA 780
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      AATCTTTAGCTGATATTCCCAGACAGCCATTGGCACTGAAGTCTTGTGATATCAGCACTG 840
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      TTCGTCCCCATCAGCTCCTTGTTGGTGGAAGTGATGCATTTGCACGACTGTATGATAGGA 900
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      GAATGCTTCCACCATTGAGCACATGCCAAACAAAAAAGGAACCACCTCCATGTATTAAAA 960
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      TGTTCTGTCCAATGCACCTTGCTGATACTGTGAGTTCCCTGTTCTTGAGTGTATTGTTAT 1020
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      TGTCCCAACTGTGTATGGTAAATATGGTAGCAGTTGTTGCTGGGTATACTCCCTCGTGTC 1080
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      ATAAAATGAGTAGCATTTTGTACCATCAACGCAGTTTCCAAAACACACATTTGACAACTA 1140
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      GTTTCTGTTATATGGTTTTATGAAACATAGTAAAATTTAAGACAAATCAAGGATATCAAT 1200
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      TTCATACTTCCAATCTACACAAGTGAATTTGACAGCTAAATTTTATAAAGTTCGACCACA 1260
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      TGTTCCCCAAAACATTTATTTTTTTACTGGATGCAATACCATATATATGCGATTTGCTGT 1320
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      GCTGGCTATATACATTTTATATGCTGACTCAAAGTTGACCAAATTAAATGTAAATCTTGA 1380
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      ATTTAAAGTTTAAAAATTCAGGGTAGGAGATTGATAGAACACATGAAGCTTTTTTGGCTG 1440
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      TTTTTCTTTAGCATGAGAATTTTCATGTAATAGTCAGTGTTGATAATTCTGTTATTGCGA 1500
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      GCAGTTTTATGATTTGTTACATGTGCTTTATGGATAACCTTGTATTGCACGGTCATGGAT 1560
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      AAATTTTAAATGTGCTTTTCAACATAAACTACTACTTCTGGAATATTTGTATTTTTTCCC 1620
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      AGAAAAATTGGCCTATAAAGCTTAAAGCATTCAAGCTAGAGTAGGCAATTTTGTTCTAGT 1680
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      TTAAGAATTTTGTTATTTCTGAAGCAACTCGTTCCTTCAATATCAATTGACATTTGGCCT 1740
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      ACGTTGTAACCAGAGGAAGTCAAATTTGCATCTAACTCATGTTGCGTTCAGCCCAAATGG 1800
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      TAAGGAGGTTCTGTTGAGCTACAGTGGTGAACATGTATATCTATTTGATGTTGACCTAGA 1860
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      AAATACGAGTTCTGTGAGATACACAGCAGACAATGTACAGGAGCAATTATGTCTACCCCC 1920
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      TTTTAACAAAGAGCCAGCAAAGTTAATTTCAAAACAACAGAAGTTTCCTGTAAACAGAGC 1980
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      TTCAAGAAATGTGTGTAGGGTGAGTTGTGCTCTCTCTCTCTCTCTCTGCAATTCAGACCA 2040
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      CACTGTTTGCTTGATCTGCTGGACATGTTGAACCGCTTTGCCTTTAATGGCACCCGTTTC 2100
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      AGGTAGATACGTTCAAGAAACTTATGCAAGTTGCAACAAAATCTCTTGAGATGGGCACTA 2160
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      ACTTGATGCTTGGGGTTGAAGCATGCTCTACAATACTTCTGGCAGTGGACCATAATATTG 2220
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      ATGATAACATGAAGCATGATTGCTTGTGTACTCGGGCAGGATTGTATCTAAAGAGGAGGT 2280
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      GGAAAAATGATGTATACATGGCTATAAGGGATTGCAACAGTGCAAGGTGTATAGATTCCA 2340
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      GATCATTTCAGGCGCATCTGTATATGGCAGAAGCACTATTACAGTTAGGAAGGCTGAAAG 2400
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      AGGCATCTGAATATGTGGATGCATTAAATACTATTGTTCCACCTTATTCTCAGTCAGTGA 2460
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      AGCAAGTGGAAAATATAAAGGAGCAGCTTTTTGCAGCTGAACTTGAGAAGAATAAAAAGG 2520
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      ATCAAGTAGGGAATACCTACACTGATGCACGACATGGGCGGTTACGCTCATTAAGTGATC 2580
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      TACTGTTTAGATCAGATGCCAGTGGCTCGTCATCACAGGAGGGTCGAGAAGATTCAGATT 2640
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      ATGATGATGAAATGGAGTTGGACTTTGAAACATCAGCATCAGGTGATGAAAGCCGTGATA 2700
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      GTGATCCAGGTCTTGTCCGGGGTAGTTTAAGTTTAAGATTTCACAGAAGAGATAGTCAAA 2760
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      CTGACGAACATTCTGGTGAAAATGGATCAGCTGAGTCCACTCAGAATGGTGATTCTGCCT 2820
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      ATCAGCCAGAAGTTGCCGTTGACATGAAGCAAAGATATGTTGCACACTGCAATGTGGGGA 2880
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      CAGATATAAAGCAAGCTAGCTTTCTCGGTGAACAAGGGGAGTTTATTGCTAGCGGAAGTG 2940
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      ATGATGGTAGATGGTTCATATGGGAGAAACGAACTGGAAGGTTGATTAAAATGCTTGCAG 3000
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      GGGATGGAGCCGTTGTGAACTGTATACAATCTCATCCATATGACTGTGCTGTTGCAACAA 3060
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      GTGGTATAGATAACACAATAAAGTTATGGACACCGGATGCGAACGCTACATCTATGATTG 3120
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      CTGGACCCGAAATTGATGTATCAAGTGTCATAGAAAACAATCAGAGGAAGCTCTCCCGGA 3180
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      ACCGTGAAATTTTGCTACCTTTCGAATTTTTGGAACGATTTCGAATGCATGAGTTTGGTG 3240
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      AAGGAAGTTTACATCCTTTGGAGTGTGCACAGAGCTGATTTCCTATTGCTTAAGTTTTGC 3300
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      TGAGCTTACGGGAAAAAGAAGGAAATGCATGGAAGGTGACTTCATCCAAGAGATAAGCTG 3360
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      TTCATGTTTTGATAGGAGTGAAACTGCAAGGCCTTGCTGCAGTTTTAGGCTTGGATTATT 3420
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      GATTAATGTTGGCACACCTCCTTATGCGGTGTCTAAGCAGGCGTGTTGTTGCTTGAGATG 3480
consensus_6933#1      ------------------------------------------------------------
                                                                                  

consensus_6933#0      AGAATAAACAGCTAAATGCTGTTGCCTGCTGGTTGGGTATAATGATTGATCTCTGGTACG 3540
consensus_6933#1      -----------------------------------GGTATAATGATTGATCTCTGGTACG 25
                                                         *************************

consensus_6933#0      CAATG-TATATCCATTCCCTTGTACAGATTGTAGGGAGGGAAACAATCGAAGAGCCATAG 3599
consensus_6933#1      CCATGGTATATCCCTTCCCTTGTACAGATTGTAGGGAGCCAACCA-TCGAAGAGCCATAG 84
                      * *** ******* ************************  ** ** **************

consensus_6933#0      CAGAGGCTTAAGCCATAATGTTCCTCTCTTTGGCCCGGAGGGCAACGCCATTTCAGGTCG 3659
consensus_6933#1      CAGAGGCTTAAGCCATAATGTTCCTCTCTTTGGCCCGGAGGGCAACGCCCTTTCAGGTCG 144
                      ************************************************* **********

consensus_6933#0      GGAAGCTTCGGTTCCCGTATTATCCGGTATTGCAGTATAGGATATATTTCCCTACACTAG 3719
consensus_6933#1      GGAAGCTTCGGTTCCCGTATTATCCGGTATTGC-GTATAGGATATATTTCCCTACACTGA 203
                      ********************************* ************************  

consensus_6933#0      ---CACAACTTTTGTGTGGCCGTGACCGGT-TGTGTTCAGTTGCCCTTGCATG-CGTCCG 3774
consensus_6933#1      GCACACACTTTTTGTGTGNCCGTGACCGGTGTGNGTTCAGTTGCCCTTGCATNGCGTCCG 263
                         ****  ********* *********** ** ******************  ******

consensus_6933#0      CTCCCAAATGGTTCAGC-AATTGACTTGTAAAAACTGGACTTGGCC-TACGTGAATCTTC 3832
consensus_6933#1      CTCCCCAATGGTTCAGCCAATTGACTTGTAAAAACTGGACTTGGCCCTACGTGAATCTTC 323
                      ***** *********** **************************** *************

consensus_6933#0      ATATTGC-TTTCTTTGAT-GTAT--ATGTGGGTGTATGTGCA-GTCTATGTATTCCGTAA 3887
consensus_6933#1      ATATTGCCTTTCTTTGATTGTAATAATGTGGGTGTATGCTTGCGTCTATGTATTCCGTAA 383
                      ******* ********** ***   *************     *****************

consensus_6933#0      TAACAGATGC-GCTGGAAAAAAAAA----------------------- 3911
consensus_6933#1      TAAAAGATCCCNCTGGAGATATGGTACTCCCGGATGAAAAAAAAAAAA 431
                      *** **** *  ***** * *


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)