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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7062#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2153 fasta sequence
[TGTGACGGAGAGAGTACTATTGGAAAGATCAGCTAGTTGGAAAATGCCATCTAGTTGTAACTAATATGTTGGACAGGGGAAAGTTACATTGCTAAGGTCTAAAGTGGAAGAATTAAGGGTTTTTTAACTTTTAGTCATGGTGAATCTTCACTGACTTGATAATTGACTTAGTTGTCTTATGTTGGAAGCCACAAGTTCCGGATTGATGGAATTACTGAGTCCCACTGCAAAAATCACCAAGTTGGAAAATGATCAAAAGATGGAATTTGTTTTTTCCGTAATTTTCTCTGATTGAAATGATTGTTTAGGTGTTATCATCCATTCATCCTAATAGTAGACTAGGATAGTACGACATAACTGTTCTCTCTACATGCTTTGTTTTGTCATCATTTTGTTGTGCTACTGTGACCATAATTGTTGTTATATGTGAATGTTTGGTGGCATGATCATCCTGAAATTATAACTTGTCAATTGTCATACTTGTGGTGTCCATCTCTGTTCTGGTGCATGTGCCAAGCAAGCTATTGCTAATGATCTGTCATGTTGGTGTCCATATGCTGTTGGTAGATAAATCAGTTGTTGAGTTTGATGGCTCATTTTGTACGGTTGCCTTGGGACCTTCATTTAGTCTGTGTTGTGTTGCCTAAATCCTAATGCACAGTAGGATGTGCTATTTTATCCAGTTTTCAGTTCTAGACGGAAACCCTGAATGCTCTGGAGATCTGGTGAGAAGTACATTTTCATTACTCTAGTGTTATCTGTTCCTGTAGTTCATGATTAATTCTGTGTCATGTGGTTTTGCTCTGGTAGCGCCTGCCTAACTCTATTAGGAAGGGTCTTGTACGCTCATTATTGTCCCCCTAAGTTAGGAAGGTCATGCACCAAACCAAACTTGAGAGCTGCAAATGAACATCACCACACAAGGGTAATAAATGATTCTGTTATATGCTGTCTCTCCTCATTCTTTTTGTTCAGTTACATCTATATGTAGTGATGTCGGATAAACAAACACCTGTTACTTTCTATGTACTTTAAGAGCGAGGTGGAGGTGAAGTTATCAGTGTGTTTTTTTATGAATTACTCCCCAAATTTCTTCAGTAGTATGCAATAAGGCTTCCATGTGTTTGTTTGTTCTTATTATTTGACAACCTTCTGAGATCACATTTTAACATGGAAAAGCCCGATACAACCTAATTGTTATGTGTGGGTAAAATTTGCAATTAGGGCGCATAAACACTGTCAAATGCTCCTTAGAACAAAAGAATGAAAGACATGTTCGATGCAAAGATCACATTGTTTTTAATAACTCTTTAATAACAATATTAATAATTTTGTAAACATGTTAACTAATCAGTATGGTCAATTTCCTTTTACAACTATTTATTTCTAGGACATTTAATGTTTTAGTTCTTATCATTCCCAGAATCTTTACAAGATAAATGTCGAGACATTTTTCAGAGGGCATATTAGCCTGCTCAAACTGATCAATAGAGAATTAGGCACTTTGTTGTCTGATTTGACCATTTTAATGTTAATATTTTAATTAAATTTGTACATACCAAAGTTAGTTGTGCAGCTTGCCTTTCCTGATATAGCTTTGTTTGTTAATATATTCTCTGTTTTCTTAGTCAATACCGTGCATGATTCTAAATATTTTTTTGCTTGACCATTGTTGTAATATTTCTTTCTGTTTGTGTTCCGCAGGTGGCAAGAATTTTGTAGAGCGCTGGCTTTCTTCTCTTCCAAACTGATTATTTATCCATTCTTCTATGGCTTCGTTATCTTTAGCATTTTTATGTCTCTCGTATTTGTAAATATATCGATGAAGACATGAACCCCAGAAAACACCCAACAAAAAAGAAGATTAAAAGTTGAGGAGCAGTGGACCGAGATTCCAACGTTAAGGTACTCTTGCAGTGTACTAAGAGTCATGAAAACGAAAGATTACTGCCACGTGCTGACAACCTGAAGTTGAATCGACGAATTGTTAAGATTACCATTGATCTACTTGCTTCGGGATGTTTAATCTACCTGTATATGATGGCAGTTTACCTCATTTGTGTGACTGAAATTCTTCTGTACATATATGAAGGCAGAAACATTTGAGATGAACTCCAATGAGAATATGCATTTCTTCTGTATATATAATAAAC]
[+] EMBL AK066387 [TGTGACGGAGAGAGTACTATTGGAAAGATCAGCTAGTTGGAAAATGCCATCTAGTTGTAACTAATATGTTGGACAGGGGAAAGTTACATTGCTAAGGTCTAAAGTGGAAGAATTAAGGGTTTTTTAACTTTTAGTCATGGTGAATCTTCACTGACTTGATAATTGACTTAGTTGTCTTATGTTGGAAGCCACAAGTTCCGGATTGATGGAATTACTGAGTCCCACTGCAAAAATCACCAAGTTGGAAAATGATCAAAAGATGGAATTTGTTTTTTCCGTAATTTTCTCTGATTGAAATGATTGTTTAGGTGTTATCATCCATTCATCCTAATAGTAGACTAGGATAGTACGACATAACTGTTCTCTCTACATGCTTTGTTTTGTCATCATTTTGTTGTGCTACTGTGACCATAATTGTTGTTATATGTGAATGTTTGGTGGCATGATCATCCTGAAATTATAACTTGTCAATTGTCATACTTGTGGTGTCCATCTCTGTTCTGGTGCATGTGCCAAGCAAGCTATTGCTAATGATCTGTCATGTTGGTGTCCATATGCTGTTGGTAGATAAATCAGTTGTTGAGTTTGATGGCTCATTTTGTACGGTTGCCTTGGGACCTTCATTTAGTCTGTGTTGTGTTGCCTAAATCCTAATGCACAGTAGGATGTGCTATTTTATCCAGTTTTCAGTTCTAGACGGAAACCCTGAATGCTCTGGAGATCTGGTGAGAAGTACATTTTCATTACTCTAGTGTTATCTGTTCCTGTAGTTCATGATTAATTCTGTGTCATGTGGTTTTGCTCTGGTAGCGCCTGCCTAACTCTATTAGGAAGGGTCTTGTACGCTCATTATTGTCCCCCTAAGTTAGGAAGGTCATGCACCAAACCAAACTTGAGAGCTGCAAATGAACATCACCACACAAGGGTAATAAATGATTCTGTTATATGCTGTCTCTCCTCATTCTTTTTGTTCAGTTACATCTATATGTAGTGATGTCGGATAAACAAACACCTGTTACTTTCTATGTACTTTAAGAGCGAGGTGGAGGTGAAGTTATCAGTGTGTTTTTTTATGAATTACTCCCCAAATTTCTTCAGTAGTATGCAATAAGGCTTCCATGTGTTTGTTTGTTCTTATTATTTGACAACCTTCTGAGATCACATTTTAACATGGAAAAGCCCGATACAACCTAATTGTTATGTGTGGGTAAAATTTGCAATTAGGGCGCATAAACACTGTCAAATGCTCCTTAGAACAAAAGAATGAAAGACATGTTCGATGCAAAGATCACATTGTTTTTAATAACTCTTTAATAACAATATTAATAATTTTGTAAACATGTTAACTAATCAGTATGGTCAATTTCCTTTTACAACTATTTATTTCTAGGACATTTAATGTTTTAGTTCTTATCATTCCCAGAATCTTTACAAGATAAATGTCGAGACATTTTTCAGAGGGCATATTAGCCTGCTCAAACTGATCAATAGAGAATTAGGCACTTTGTTGTCTGATTTGACCATTTTAATGTTAATATTTTAATTAAATTTGTACATACCAAAGTTAGTTGTGCAGCTTGCCTTTCCTGATATAGCTTTGTTTGTTAATATATTCTCTGTTTTCTTAGTCAATACCGTGCATGATTCTAAATATTTTTTTGCTTGACCATTGTTGTAATATTTCTTTCTGTTTGTGTTCCGCAGGTGGCAAGAATTTTGTAGAGCGCTGGCTTTCTTCTCTTCCAAACTGATTATTTATCCATTCTTCTATGGCTTCGTTATCTTTAGCATTTTTATGTCTCTCGTATTTGTAAATATATCGATGAAGACATGAACCCCAGAAAACACCCAACAAAAAAGAAGATTAAAAGTTGAGGAGCAGTGGACCGAGATTCCAACGTTAAGGTACTCTTGCAGTGTACTAAGAGTCATGAAAACGAAAGATTACTGCCACGTGCTGACAACCTGAAGTTGAATCGACGAATTGTTAAGATTACCATTGATCTACTTGCTTCGGGATGTTTAATCTACCTGTATATGATGGCAGTTTACCTCATTTGTGTGACTGAAATTCTTCTGTACATATATGAAGGCAGAAACATTTGAGATGAACTCCAATGAGAATATGCATTTCTTCTGTATATATAATAAAC]
consensusID : consensus_7062#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1675 fasta sequence
[TGGCTTACGAAACAAGAACAGAAGCCTCCTCCTCTCTCTTCTTCTCCCATCCCCCCTCCCCGATCCTCTCGCCCACCTCCAGATTCAAATCTTGCGAGCAGTTTATCCCTCCATTGGATTTGATCCAGTGACGTCCTAACAACCCGGCTGGCTGGTGGAAGTGGAGTTTGAGAGCTTGCTTGTCCTGAAATCACGCCTCCTTCGTCTCGGGCCGGGTTTCGTTGGTTGGTTTCTTGGTTCTCGAGCCAATGGAGGAGAGTTCTTGCAGATTGGAGTAAAAAAAGATCTTATGTACTAGTAGTGGTGGCTAGTGAGTGATCTGGGTTTCGTTCGGTTTGTTTTGTTTCGCCTCCCCCCAATTTGGTGCTTTCGGTGTCTGTGCGAAGCGTGTTGGGATGACGAACCGATTGGATTTCTTGTGAGCGACTACTCCTGATTGTTTCGTTGTTGATTCGCCTTTATTTCATTGATTAGAGTGGAAAAAGGGCTTATCGTTTTTATTTTTTTTGGCTATTTGTGAGCAATTTTTTGTTCTCCTCCATCTAGCATGTTTGTTTGTTTGTAATTGCTTCAGAAGGCGGCGAGTTTGCTTAATTTTTGGTAGAAAATTTATCTTCATTGGATCTATAGCTATAGCGAAGATTTGGATTCTTGAGGGAGATTTTTTTTTGTTTAAATTCTTGTTGGATCCGGCGATTTTTGTCCGGATCAAGAAGAAGGGGAGAGAAATCTTGGCTCCTAGCGGCCATGGGGCTGAGCCGCTTCTCCGACTGGATATGGCCGGGGAGTAGAACCACCCGGCGAGCTCGCGACGCTCCGGCGAGCAGCGTGGCCTTGGCCGTGGCCGGCGCGCTGTTCCCGGACTCCCCCTCCGGGTTCCGGGAGCCGACGGTGGGCACCCTCAGGGGCCCGGCGAGCTCCGGCGGCGGCGCTCGACGCGCCCGGAAGGGGACGAGCCGGCGGCGCAGCCGTGAGGTGGTCGACAGGGAGCACGACATGGTCGTCGTGCCGCTCGGCGGCGGCGGCGACGGGTACTCGTCGGACTCGGGCTCCGACGACTCCGACTGGTCCATCGGCTGGCTCGAGCCGCAGGGGCCGGAGCTCCACAGCGACGGGGATTCCGACGGCAGCTTCGCCGTCCTCGTGCCGTGTTACCGCCACGGCCGTTGCCGCGTCGAGGAGCCCGGCCGCGGTAGGCTCGCCGACGGCAACGTTTCCGGTGGCAAGAATTTTGTAGAGCGCTGGCTTTCTTCTCTTCCAAACTGATTATTTATCCATTCTTCTATGGCTTCGTTATCTTTAGCATTTTTATGTCTCTCGTATTTGTAAATATATCGATGAAGACATGAACCCCAGAAAACACCCAACAAAAAAGAAGATTAAAAGTTGAGGAGCAGTGGACCGAGATTCCAACGTTAAGGTACTCTTGCAGTGTACTAAGAGTCATGAAAACGAAAGATTACTGCCACGTGCTGACAACCTGAAGTTGAATCGACGAATTGTTAAGATTACCATTGATCTACTTGCTTCGGGATGTTTAATCTACCTGTATATGATGGCAGTTTACCTCATTTGTGTGACTGAAATTCTTCTGTACATATATGAAGGCAGAAACATTTGAGATGAACTCCAATGAGAATATGCATTTCTTCTGTATATATAATAAACGATTGTC]
[+] EMBL AK072217 [TGGCTTACGAAACAAGAACAGAAGCCTCCTCCTCTCTCTTCTTCTCCCATCCCCCCTCCCCGATCCTCTCGCCCACCTCCAGATTCAAATCTTGCGAGCAGTTTATCCCTCCATTGGATTTGATCCAGTGACGTCCTAACAACCCGGCTGGCTGGTGGAAGTGGAGTTTGAGAGCTTGCTTGTCCTGAAATCACGCCTCCTTCGTCTCGGGCCGGGTTTCGTTGGTTGGTTTCTTGGTTCTCGAGCCAATGGAGGAGAGTTCTTGCAGATTGGAGTAAAAAAAGATCTTATGTACTAGTAGTGGTGGCTAGTGAGTGATCTGGGTTTCGTTCGGTTTGTTTTGTTTCGCCTCCCCCCAATTTGGTGCTTTCGGTGTCTGTGCGAAGCGTGTTGGGATGACGAACCGATTGGATTTCTTGTGAGCGACTACTCCTGATTGTTTCGTTGTTGATTCGCCTTTATTTCATTGATTAGAGTGGAAAAAGGGCTTATCGTTTTTATTTTTTTTGGCTATTTGTGAGCAATTTTTTGTTCTCCTCCATCTAGCATGTTTGTTTGTTTGTAATTGCTTCAGAAGGCGGCGAGTTTGCTTAATTTTTGGTAGAAAATTTATCTTCATTGGATCTATAGCTATAGCGAAGATTTGGATTCTTGAGGGAGATTTTTTTTTGTTTAAATTCTTGTTGGATCCGGCGATTTTTGTCCGGATCAAGAAGAAGGGGAGAGAAATCTTGGCTCCTAGCGGCCATGGGGCTGAGCCGCTTCTCCGACTGGATATGGCCGGGGAGTAGAACCACCCGGCGAGCTCGCGACGCTCCGGCGAGCAGCGTGGCCTTGGCCGTGGCCGGCGCGCTGTTCCCGGACTCCCCCTCCGGGTTCCGGGAGCCGACGGTGGGCACCCTCAGGGGCCCGGCGAGCTCCGGCGGCGGCGCTCGACGCGCCCGGAAGGGGACGAGCCGGCGGCGCAGCCGTGAGGTGGTCGACAGGGAGCACGACATGGTCGTCGTGCCGCTCGGCGGCGGCGGCGACGGGTACTCGTCGGACTCGGGCTCCGACGACTCCGACTGGTCCATCGGCTGGCTCGAGCCGCAGGGGCCGGAGCTCCACAGCGACGGGGATTCCGACGGCAGCTTCGCCGTCCTCGTGCCGTGTTACCGCCACGGCCGTTGCCGCGTCGAGGAGCCCGGCCGCGGTAGGCTCGCCGACGGCAACGTTTCCGGTGGCAAGAATTTTGTAGAGCGCTGGCTTTCTTCTCTTCCAAACTGATTATTTATCCATTCTTCTATGGCTTCGTTATCTTTAGCATTTTTATGTCTCTCGTATTTGTAAATATATCGATGAAGACATGAACCCCAGAAAACACCCAACAAAAAAGAAGATTAAAAGTTGAGGAGCAGTGGACCGAGATTCCAACGTTAAGGTACTCTTGCAGTGTACTAAGAGTCATGAAAACGAAAGATTACTGCCACGTGCTGACAACCTGAAGTTGAATCGACGAATTGTTAAGATTACCATTGATCTACTTGCTTCGGGATGTTTAATCTACCTGTATATGATGGCAGTTTACCTCATTTGTGTGACTGAAATTCTTCTGTACATATATGAAGGCAGAAACATTTGAGATGAACTCCAATGAGAATATGCATTTCTTCTGTATATATAATAAACGATTGTC]
[+] EMBL CB641695 [ CCATCCCCCCTCCCCGATCCTCTCGCCCACCTCCAGATTCAAATCTTGCGAGCAGTTTATCCCTCCATTGGATTTGATCCAGTGACGTCCTAACAACCCGGCTGGCTGGTGGAAGTGGAGTTTGAGAGCTTGCTTGTCCTGAAATCACGCCTCCTTCGTCTCGGGCCGGGTTTCGTTGGTTGGTTTCTTGGTTCTCGAGCCAATGGAGGAGAGTTCTTGCAGATTGGAGTAAAAAAAGATCTTATGTACTAGTAGTGGTGGCTAGTGAGTGATCTGGGTTTCGTTCGGTTTGTTTTGTTTCGCCTCCCCCCAATTTGGTGCTTTCGGTGTCTGTGCGAAGCGTGTTGGGATGACGAACCGATTGGATTTCTTGTGAGCGACTACTCCTGATTGTTTCGTTGTTGATTCGCCTTTATTTCATTGATTAGAGTGGAAAAAGGGCTTATCGTTTTTATTTTTTTTGGCTATTTGTGAGCAATTTTTTGTTCTCCTCCATCTAGCATGTTTGTTTGTTTGTAATTGCTTCAGAAGGCGGCGAGTTTGCTTAATTTTTGGTAGAAAATTTATCTTCATTGGATCTATAGCTATAGCGAAGATTTGGATTCTTGAGGGAGATTTTTTTTTGTTTAAATTCTTGTTGGATCCGGCGATTTTTGTCCGGATCAAGAAGAAGGGGAGAGANATCTTGGCTCCTAGCGGCCATGGGGCTGAGCCGCTTCTCCGACTGGATATGGCCGGGGAGTAGAACCACCCGGCGAGCTCGCGACGCTCCGGCGAGCAGCGTGGCCTTGGCCGTGGC ]
[-] EMBL CB641696 [ CGACAGGGAGCACGACATGGTCGTCGTGCCGCTCGGCGGCGGCGGCGACGGGTACTCGTCGGACTCGGGCTCCGACGACTCCGACTGGTCCATCGGTTGGCTCGAGCCGCAGGGGCCGGAGCTCCTCAGCGACGGGGATTCCGACGGCAGCTTAGCCGTCCTCGTGCCGTGTTACCGCCACGGCCGTTGCCGCGTCGAGGAGCCCGGCCGCGGTAGGCTCGCCGACGGCAACGTTTCCGGTGGCAAGAATTTTGTAGAGCGCTGGCTTTCTTCTCTTCCAAACTGATTATTTATCCATTCTTCTATGGCTTCGTTATCTTTAGCATTTTTATGTCTCTCGTATTTGTAAATATATCGATGAAGACATGAACCCCAGAAAACACCCACCAAAAAAGAAGATTAAAAGTTGAGGAGCAGTGGACCGAGATTCCAACGTTAAGGTACTCTTGCAGTGTACTAAGAGTCATGAAAACGAAAGATTACTGCCACGTGCTGACAACCTGAAGTTGAATAGACGAATTGTTAAGATTACCATTGATCTACTTGCTTCGGGATGTTTAATTTACCTGTATATGATGGCAGTTTACCTCATTTGTGTGACTGAAATTCTTCTGTACATATATGAAGGCAGAAACATTTGAGATGAACTCCAATGAGAATATGCATTTCTTCTGTATATATAATAAAaaaaagg ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7062#0 TGTGACGGAGAGAGTACTATTGGAAAGATCAGCTAGTTGGAAAATGCCATCTAGTTGTAA 60
consensus_7062#1 ------------------------------------------------------------
consensus_7062#0 CTAATATGTTGGACAGGGGAAAGTTACATTGCTAAGGTCTAAAGTGGAAGAATTAAGGGT 120
consensus_7062#1 ------------------------------------------------------------
consensus_7062#0 TTTTTAACTTTTAGTCATGGTGAATCTTCACTGACTTGATAATTGACTTAGTTGTCTTAT 180
consensus_7062#1 ------------------------------------------------------------
consensus_7062#0 GTTGGAAGCCACAAGTTCCGGATTGATGGAATTACTGAGTCCCACTGCAAAAATCACCAA 240
consensus_7062#1 ------------------------------------------------------------
consensus_7062#0 GTTGGAAAATGATCAAAAGATGGAATTTGTTTTTTCCGTAATTTTCTCTGATTGAAATGA 300
consensus_7062#1 ------------------------------------------------------------
consensus_7062#0 TTGTTTAGGTGTTATCATCCATTCATCCTAATAGTAGACTAGGATAGTACGACATAACTG 360
consensus_7062#1 ------------------------------------------------------------
consensus_7062#0 TTCTCTCTACATGCTTTGTTTTGTCATCATTTTGTTGTGCTACTGTGACCATAATTGTTG 420
consensus_7062#1 ------------------------------------------------------------
consensus_7062#0 TTATATGTGAATGTTTGGTGGCATGATCATCCTGAAATTATAACTTGTCAATTGTCATAC 480
consensus_7062#1 -----------TGGCTTACGAAACAAGAA--CAGAAGCCTCCTCCTCTCTCTTCTTCTCC 47
** * * * * * * *** * * ** ** * * *
consensus_7062#0 TTGTGGTGTCCATCTCTGTTCTGGTGCATGTGCCAAGCAAGCTATTGCTAATGATCTGTC 540
consensus_7062#1 CATCCCCCCTCCCCGATCCTCTCGCCCACCTCCAGATTCAAATCTTGCGAGCAGTTTATC 107
* * * *** * ** * * * * * **** * * * **
consensus_7062#0 ATGTTGGTGTCCATATGCTGTTGGTAGATAAATCAGTTGTTGAGTTTGATGGCTCATTTT 600
consensus_7062#1 CC-------TCCAT-TGGATTTGATCCAGTGACGTCCTAACAACCCGGCTGGCTGGT--- 156
***** ** *** * * * * * * ***** *
consensus_7062#0 GTACGGTTGCCTTGGGACCTTCATTTAGTCTGTGTTGTGTTGCCTAAATCCTAATGCACA 660
consensus_7062#1 GGAAGTGGAGTTTGAGAGCTTGCTTGTCCTGAAATCACGCCTCCTTCGTCTCGGGCCG-- 214
* * * *** ** *** ** * * *** ** *
consensus_7062#0 GTAGGATGTGCTATTTTATCCAGTTTTCAGTTCTAGACGGAAACCCTGAATGCTCTGGAG 720
consensus_7062#1 ---GGTTTCGTTGGTTGGT----TTCTTGGTTCTCGAGCCAATGGAGGAGAGTTCTTGCA 267
** * * * ** * ** * ***** ** ** ** * *** *
consensus_7062#0 ATCTGGTGAGAAGTACATTTTCATTACTCTAGTGTTATCTGTTCCTGTAGTTCATGATTA 780
consensus_7062#1 GATTGGAGTAAAAAAAGATCTTAT-GTACTAGTAGTG---------GTGGCTAGTGAGTG 317
*** * ** * * * ** ***** * ** * * *** *
consensus_7062#0 ATTCTG-TGTCATGTGGTTTTGCTCTGGTAGCGCCTGCCTAACTCTATTAGGAAGGGTCT 839
consensus_7062#1 ATCTGGGTTTCGTTCGGTTTGTTTTGTTTCGCCTCCCCCCAATTTGGTGCTTTCGGTGTC 377
** * * ** * ***** * * ** * ** ** * * **
consensus_7062#0 TGTACGCTCATTATTGTCCCCCTAAGTTAG--GAAGGTCATGCACCAAACCAAACTTGAG 897
consensus_7062#1 TGTGCGAAGCGTGTTGGGATGACGAACCGATTGGATTTCTTGTGAGCGACTACTCCTGAT 437
*** ** * *** * * * ** ** ** * * ***
consensus_7062#0 AGCTGCAA-ATGAACATCACCACACAAGGGTAATAAATGATTCTGTTATATGCTGTCTCT 956
consensus_7062#1 TGTTTCGTTGTTGATTCGCCTTTATTTCATTGATTA--GAGTGGAAAAAGGGCTTATCGT 495
* * * * * * * * ** * ** * * *** *
consensus_7062#0 CCTCATTCTTTTTGTTCAGTTACATCTATATGTAGTGATGTCGGATAAACAA-ACACCTG 1015
consensus_7062#1 TTTTATTTTTTTTGGCTATTTGTGAGCA-ATTTTTTGTTCTCCTCCATCTAGCATGTTTG 554
* *** ****** * ** * ** * ** * ** * * * **
consensus_7062#0 TTACTTTCTATGTACTTTAAGAGCGAGGTGGAGGTGAAGTTATCAGTGTGTTTTTTTATG 1075
consensus_7062#1 TTTGTTTGTAATTGCTTCAGAAG-------GCGGCGAGTTTGCTTA-ATTTTTGGTAGAA 606
** *** ** * *** * ** * ** ** ** * *** *
consensus_7062#0 AATTACTCCCCAAATTTCTTCAGTAGTATGCAATAAGGCTTCCATGTGTTTGTTTGTTCT 1135
consensus_7062#1 AATTTATCTTC--ATTGGATCTATAGC-TATAGCGAAGATTTGG-ATTCTTGAGGGAGAT 662
**** ** * *** ** *** * * * * ** * *** * *
consensus_7062#0 TATTATTTGACAACCTTCTGAGATCACATTTTAACATGGAAAAGCCCGATACAACCTAAT 1195
consensus_7062#1 TTTTTTTTGTTTAAATTCT---------TGTTGGATCCGGCGATTTTTGTCCGGATCAAG 713
* ** **** * **** * ** * * * * **
consensus_7062#0 TGTTATGTGTGGGTAAAATTTGCAATTAGGGCGCATAAACACTGTCAAATGCTCC--TTA 1253
consensus_7062#1 AAGAAGGGGAGAGAAATCTTGGCTCCTAGCGGCCATGGGGCTGAGCCGCTTCTCCGACTG 773
* * * * * ** ** ** *** * *** * * **** *
consensus_7062#0 GA-ACAAAAGAATGAAAGACATGTTCGATGCAAAGATCACATTGTTTTTAATAACTCTTT 1312
consensus_7062#1 GATATGGCCGGGGAGTAGAACCACCCGGCGAGCTCGCGACGCTCCGGCGAGCAGCGTGGC 833
** * * *** ** * ** * * * *
consensus_7062#0 AATAACAATATTAATAATTTTGTAAACATGTTAACTAATCAG-TATGGTCAATTTCCTTT 1371
consensus_7062#1 CTTGGCCGTGGCCGGCGCGCTGTTCCCGGACTCCCCCTCCGGGTTCCGGGAGCCGACGGT 893
* * * *** * * * * * * * * * *
consensus_7062#0 TACAACTATTTATTTCTAGGACATTTAATGTTTTAGTTCTTATCATTCCCAGAATC---- 1427
consensus_7062#1 GGGCACCCTCAGGGGCCCGGCGAGCTCCGGCGGCGGCGCTCGACGCGCCCGGAAGGGGAC 953
** * * ** * * * * ** * *** ***
consensus_7062#0 ---TTTACAAGATAAATGTCGAGACATTTTTCAGAGGGCATATTAGCCTGCTCAAACTGA 1484
consensus_7062#1 GAGCCGGCGGCGCAGCCGT-GAGGTGGTCGACAGGGAGCACGACATGGTCGTCGTGCCGC 1012
* * ** *** * *** * *** * * ** * *
consensus_7062#0 TCAATAGAGAATTAGGCACTTTGTTGTCTGATTTGACCATTTTAATGTTAATATTTTAAT 1544
consensus_7062#1 TCGGCGGCGGCGGCGACGGGTACTCGTCGGACTCGGGC--TCCGACG-----ACTCCGAC 1065
** * * * * * * *** ** * * * * * * * * *
consensus_7062#0 TAAATTTGTACATACCAAAGTTAGTTGT-GCAGCTTGCCTTTCCTGATATAGCTTTGTTT 1603
consensus_7062#1 TGG---TCCATCGGCTGGCTCGAGCCGCAGGGGCCGGAGCTCCACAGCGACGGGGATTCC 1122
* * * * ** * * ** * * * * *
consensus_7062#0 GTTAATATATTCTCTGTTTTCTTAGT-CAATACCGTGCATGATTCTAAATATTTTTTTGC 1662
consensus_7062#1 GACGGCAGCTTCGCCGTCCTCGTGCCGTGTTACCGC-CACGGCCGT---TGCCGCGTCGA 1178
* * *** * ** ** * ***** ** * * * * *
consensus_7062#0 TTGACCATTGTTGTAATATTTCTTTCTGTTTGTGTTCCGCAGGTGGCAAGAATTTTGTAG 1722
consensus_7062#1 G-GAGCCCGGCCGCGGTAGGCTCGCCGACGGCAACGTTTCCGGTGGCAAGAATTTTGTAG 1237
** * * * ** * * *******************
consensus_7062#0 AGCGCTGGCTTTCTTCTCTTCCAAACTGATTATTTATCCATTCTTCTATGGCTTCGTTAT 1782
consensus_7062#1 AGCGCTGGCTTTCTTCTCTTCCAAACTGATTATTTATCCATTCTTCTATGGCTTCGTTAT 1297
************************************************************
consensus_7062#0 CTTTAGCATTTTTATGTCTCTCGTATTTGTAAATATATCGATGAAGACATGAACCCCAGA 1842
consensus_7062#1 CTTTAGCATTTTTATGTCTCTCGTATTTGTAAATATATCGATGAAGACATGAACCCCAGA 1357
************************************************************
consensus_7062#0 AAACACCCAACAAAAAAGAAGATTAAAAGTTGAGGAGCAGTGGACCGAGATTCCAACGTT 1902
consensus_7062#1 AAACACCCAACAAAAAAGAAGATTAAAAGTTGAGGAGCAGTGGACCGAGATTCCAACGTT 1417
************************************************************
consensus_7062#0 AAGGTACTCTTGCAGTGTACTAAGAGTCATGAAAACGAAAGATTACTGCCACGTGCTGAC 1962
consensus_7062#1 AAGGTACTCTTGCAGTGTACTAAGAGTCATGAAAACGAAAGATTACTGCCACGTGCTGAC 1477
************************************************************
consensus_7062#0 AACCTGAAGTTGAATCGACGAATTGTTAAGATTACCATTGATCTACTTGCTTCGGGATGT 2022
consensus_7062#1 AACCTGAAGTTGAATCGACGAATTGTTAAGATTACCATTGATCTACTTGCTTCGGGATGT 1537
************************************************************
consensus_7062#0 TTAATCTACCTGTATATGATGGCAGTTTACCTCATTTGTGTGACTGAAATTCTTCTGTAC 2082
consensus_7062#1 TTAATCTACCTGTATATGATGGCAGTTTACCTCATTTGTGTGACTGAAATTCTTCTGTAC 1597
************************************************************
consensus_7062#0 ATATATGAAGGCAGAAACATTTGAGATGAACTCCAATGAGAATATGCATTTCTTCTGTAT 2142
consensus_7062#1 ATATATGAAGGCAGAAACATTTGAGATGAACTCCAATGAGAATATGCATTTCTTCTGTAT 1657
************************************************************
consensus_7062#0 ATATAATAAAC------- 2153
consensus_7062#1 ATATAATAAACGATTGTC 1675
***********
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||