cluster # 7075

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Oryza sativa
cluster # 7075 cluster # 7075 Sequences # 4 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7075#0 length = 689 sequences # 4

consensusID : consensus_7075#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 689
fasta sequence

                              [AGNTGGGCCACCGTCNTCATCAACGCCACCGCCTTCCTCCAGAGCATCGTCTCGCAGCACCTGTTCACGGTGCCGATACACGAGGCGCTGGACACGCAGATGCAGAGGCTGGACGAAGGGATGTTCTCGCGGTACAACCTCGGGAGGCGGCTGCTGGCGAGGGGGCTCGTGTTCGGAGCCAACGCCTT-CGTCACCGC-GCTCTTCCCCTTCA-TGGGCGA-T-TCGTCAACCTCTTC-GGC-TCCTT-CGTCCTCTTCCCTCTCACCTTCATGTTCCCCAGCATGGT-CGTCCT-CAAGAT--CAAAGGG-AAGGA-TGAAG-CAGGGAGATGGAACAGGATTTGGCACTGGGGCATCATCGTCGCCTCCTCCGTCCTCAGCGTCGTCACCACCGCCGCCGCCGTCCGTCTCATCGTCCACAACGCCAGCGTCTACCATTTCTTCGCGGACATGTAATCAATCGACGCCGGAGATTACCATTTGCACCGTCGATTACCATTTGC-AAGTGC-AGTGTGCTGTGATCA-GCCGGGTTTAGAGCTTTGCATTCTTCCATTAAGGATGAGATTGCAAGCGCAGCGCTGTGATTAGCGGGTTTACAGCTTTGCATTCTTCCGTAAGGATTATATCATCTTTGACGAAAAAAAAGGACCTAACCAATGTTAAGCTATGCCAACCTATTACACTTGACGCCGAAAAAAAAAA]

[+] EMBL AU095929             [AGNTGGGCCACCGTCNTCATCAACGCCACCGCCTTCCTCCAGAGCATCGTCTCGCAGCACCTGTTCACGGTGCCGATACACGAGGCGCTGGACACGCAGATGCAGAGGCTGGACGAAGGGATGTTCTCGCGGTACAACCTCGGGAGGCGGCTGCTGGCGAGGGGGCTCGTGTTCGGAGCCAACGCCTT CGTCACCGC GCTCTTCCCCTTCA TGGGCGA T TCGTCAACCTCTTC GGC TCCTT CGTCCTCTTCCCTCTCACCTTCATGTTCCCCAGCATGGT CGTCCT CAAGAT  CAAAGGG AAGGA TGAAG CAGGGAGATGGAACAGGATTTGGCACTGGGGCATCATCGTCGCCTCCTCCGTCCTCAGCGTCGTCACCACCGCCGCCGCCGTCCGTCTCATCGTCCACAACGCCAGCGTCTACCATTTCTTCGCGGACATGTAATCAATCGACGCCGGAGATTACCATTTGCACCGTCGATTACCATTTGC AAGTGC AGTGTGCTGTGATCA GCCGGGTTTAGAGCTTTGCATTCTTCCATTAAGGATGAGATTGCAAGCGCAGCGCTGTGATTAGCGGGTTTACAGCTTTGCATTCTTCCGTAAGGATTATATCATCTTTGACGAAAAAAAA                                                         ]
[-] EMBL BU673226             [                                                                  ACGGTGCCGATACACGAGGCGCTGGACACGCAGATGCAGAGGCTGGACGAAGGGATGTTCTCGCGGTACAACCTCGGGAGGCGGCTGCTGGCGAGGGGGCTCGTGTTCGGAGCCAACGCCTT CGTCACCGC GCTCTTCCCCTTCA TGGGCGACT TCGTCAACCTCTTC GGC TCCTT CGTCCTCTTCCCTCTCACCTTCATGTTCCCCAGCATGGT CGTCCT CAAGAT  CAAAGGG AAGGA TGAAG CAGGGAGATGGAACAGGATTTGGCACTGGGGCATCATCGTCGCCTCCTCCGTCCTCAGCGTCGTCACCACCGCCGCCGCCGTCCGTCTCATCGTCCACAACGCCAGCGTCTACCATTTCTTCGCGGACATGTAATCAATCGACGCCGGAGATTACCATTTGCACCGTCGATTACCATTTGC AAGTGC AGTGTGCTGTGATCA GCCGGGTTTAGAGCTTTGCATTCTTCCATTAAGGATGAGAT                                                                                                                                         ]
[+] EMBL AU095840             [                                                                                                                                                                                         CTTCCGTCACCGCAGCTNTTCCCCTTCATTGGGC A TNTCGTCAACCTCTTCAGGCATCCTTACGTCCTCTTCCCTCTCACCTTCATGTTCCCCAGCATGGTCCGTCCTCCAAGATTCCAAAGGGAAAGGATTGAAGTCAGGGAGATGGAACAGGATTTGGCACTGGGGCATCATCGTCGCCTCCTCCGTCCTCAGCGTCGTCACCACCGCCGCCGCCGTCCGTCTCATCGTCCACAACGCCAGCGTCTACCATTTCTTCGCGGACATGTAATCAATCGACGCCGGAGATTACCATTTGCACCGTCGATTACCATTTGC AAGTGC AGTGTGCTGTGATCA GCCGGGTTTAGAGCTTTGCATTCTTCCATTAAGGATGAGATTGCAAGCGCAGCGCTGTGATTAGCGGGTTTACAGCTTTGCATTCTTCCGTAAGGATTATATCATCTTTGACGAAAAAA                                                           ]
[+] EMBL BI812693             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATTTGCAAAGTGCAAGTGTGCTGTGATCAGGCCGGGTTTAGAGCTTTGCATTCTTCCATTAAGGATGAGATTTCAAGCGCAGC CTGTGATTA CGGGTTGACAGCTTTGCATTCTTCCGTAAGGATTATATCATCTTTGACGAACACATTGGACCTAACCAATGTTAAGCTATGCCAACCTATTACACTTGACGCCGAAAAAAAAAA]




>consensus_7075#0
AGNTGGGCCACCGTCNTCATCAACGCCACCGCCTTCCTCCAGAGCATCGTCTCGCAGCAC
CTGTTCACGGTGCCGATACACGAGGCGCTGGACACGCAGATGCAGAGGCTGGACGAAGGG
ATGTTCTCGCGGTACAACCTCGGGAGGCGGCTGCTGGCGAGGGGGCTCGTGTTCGGAGCC
AACGCCTTCGTCACCGCGCTCTTCCCCTTCATGGGCGATTCGTCAACCTCTTCGGCTCCT
TCGTCCTCTTCCCTCTCACCTTCATGTTCCCCAGCATGGTCGTCCTCAAGATCAAAGGGA
AGGATGAAGCAGGGAGATGGAACAGGATTTGGCACTGGGGCATCATCGTCGCCTCCTCCG
TCCTCAGCGTCGTCACCACCGCCGCCGCCGTCCGTCTCATCGTCCACAACGCCAGCGTCT
ACCATTTCTTCGCGGACATGTAATCAATCGACGCCGGAGATTACCATTTGCACCGTCGAT
TACCATTTGCAAGTGCAGTGTGCTGTGATCAGCCGGGTTTAGAGCTTTGCATTCTTCCAT
TAAGGATGAGATTGCAAGCGCAGCGCTGTGATTAGCGGGTTTACAGCTTTGCATTCTTCC
GTAAGGATTATATCATCTTTGACGAAAAAAAAGGACCTAACCAATGTTAAGCTATGCCAA
CCTATTACACTTGACGCCGAAAAAAAAAA

clustalw multiple alignements is not computed in this case