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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7100#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2842 fasta sequence
[TGAGGAGCGGTGGCGGTGGCCGAGCAACTCGCCGCGGGCAGGGAACAGGGCCCCGGCGTGCCGCGCCAGCGCTACCGCGGAGCTCCTGCGATGCTCCACCTCCGAGGTGGGACGGCCCCTCTGATCCGGCTCCTCCTCTCGCCCCTTCTCTCACGCCCAACCCTAACCCGGCTATGGCGCCCTTGTTGCCGGCGCCTCTCTTGCTGCCGCTGGTGCCACATCCGAGGGAGCAAGAGCAGCAGGAGAATGCTGAGGAAGGAGAAGAACAGAGGCCGAGGCCGACGCCGACAACCATGGAAAAGAAGGTTGTAGAGCCTTCAAAGAAGAAGAAATTTGTGGATTTGAAATCAATGTGGGGTAGAGCTGAAAAGAAACTGAAGTCTATAGTTGATAGCAATAATATTTCTGAGCATTCAGCTAGGAGGAAAGACCCTGAACCTGCTACTATACATGCACCTGCAACTAAAGAGATTGGGTGTAGTAGAGCATGTGAAGTTGGATTTGCACAAACAGAAACTCAAGTGCCCTATGAAAGTATAGAAGTATCAAGACCTCAAGATGTAGATGGCAGCATAGAAGTATCTAAACCTCATGTTGCAAATTCAGAATCTGAAGAGGAAGATGATTGGCTAGAAGATGTTGATGAGGATGTTGGTTTTCTTCCACATGATCCTGGAAAGAGGATTGCCATCTCAGATTATAGTGTGTATCAGCAAGATGAAGTGAGGATGAAGTATATTGCACTTGGGCCTTGTCGACCACCACTAGAGCAATTTCCTCAAAGAAATTGTGGAGTTGGCACTTTGCTTGCGTTATGTTGACAAGAAAGGGAGGGTGGTTGAGCGCCTTCTTGGTATTGTGCATGTTGAGAATACTACAGCTTTGATACTTAGAGATGCTATCAAGAATTTACTAATGCAACAATCATTGAGCTTGTCTAAAGTTCGTGGTCAAGGATATGATGGGGCTAGTAACATGAAGGGTGAGGTTAATGGTCTAAAGAAGCTGATTATGAATGAATCTCCTTCTGCTTATTATGTTCATTGTTTTGCACATCAACTACAATTAACTCTTGTGGCCGTTGCTAGGGAGAATGGTGATTGTGTTTGGTTTTTTGAGTAACTTGGGTATTTGTTGAATACTATTGGGATTTCTTGTAAGAAACATCAAATGCTTTGAGTTGCTCAAGCTCAAGAGATTGTAGAAGCTTTGGAATTGGGTGAAATTGAAAGTGGGCAGGGTCTGAATCAAGAGATGGGTTTGGGTAGGCCAGGAGATACACGTTGGGGATCTCACTACAAAACAGTGCAACATATTCTTATTATGTATCGCTCAATCCGGAAGGTTCTACTACAAGTTGGAAAAGATCGTTCACAAAGCACGGAAGCTATAAAAGCTCAAACTGCATTACAATCATTTGTGTCATTTGAGATTGTTTTCATGGCACACTTGTTGAACACTATTCTTGGATACACAGATGACTTAAACACAGCTTTGCAAAGGAGGGCGCAAGATATTGTGAATGCGGTTGAGCTCATTGTTTTGACAAAGATGCAATTGGAGATGTTGCGGCAAGATGATGGGTGGGAGAATTTTTTAAAAAAAGTCACCTCTTTTTTATGAAGAACGAAGTCAAAGTTCCTCAGATGGATGCTAGGTACAAGCCGGTTGGAAGATCACCAAGCTTCTTTGGTAAAGTGCAGAATCTTCACCGCTTTAAAATTGAAATGTTTTTGAGTGTTATTGATAGACAACTTAGAGAACTAAATGACAGATTTGATGAGGTGAACACAGATTTACTTGTTTGCGTGGCTTCATTCAATCCCACTAATTCATTTGGTTCTTTTGACAAGGAAATGTTGGTTAAACTTGCACAATTCTATCCCAATGACTTCTCAGCCAATGACATCATGCACCTACCTATTCAGCTTGATCGTTTTATTATTGATATGCGTAGAGATGAAAGGTTTAGAGAAGTGAACACCATTGCTGAACTTTCGGTCAAGCTTGTTGATACAAATAAGCATATCAATTACACACTTGTCTACAAGCTACTGAAATTGGTGCTAGTCCTTCCTGTAGCAACTGCAAGTGTTGAAAATGTATTCTCCACAATGAATTATGTCAAGAACAAGCAAAGAAATAGAATAGGAGATGAATACTTGAATGATTGATTGGTAACATTTCTTGAATGAGATTGTTTTCAACAAGTTCCTGATGAAGACATAATACGTCATTTCCTGTCAATAAAGGCTCGTAGAGTCAAGTTGTAACAACTTGTGTTGATTTTTCAGAACATGGACAGGATCACACTATCTTATATAATATATGTTGCTGATGGGTATCATTCAATGGCATTTTCTTCCTCTGTATTGGATCCAATCTTTATGGTGGTGCAGCTATACGCAATGACGCCAAGATTTCTCCAAGACAGAAAAGCACTACAGCACAGGAGTGTGACCTTGCAGTTTCCAGCCATTGATTAATTCTATCAGCGGGCTTTCTTGTTTGGACATAACATTCCAAGAAGCAGCTGCCAGCGATCACCAAGGAACCAAATGTCCTCCAAGCAATTGATCACGGAAGCAACCTACGAGTTACAATGGGTAGCCCATCCACTGGAATCCTGCAGCTTCCCATTCCTATGGCTTTTCTCTAACTTGCACCAGAGAACGCACAACCACGACAGACTAAATTGAATTACTCAAGCCCACATTTTCATTGAGGAGGTATAGAGAGCTAGCGTGTGTTGTGAGCAAGCAGAACAATGTTATGCCATATGCGTCTGGTTTTGTAGGAACGCACCGCTTCTACTGAAATTAATAATGGTATTGCTATAGTA]
[+] EMBL AK100657 [TGAGGAGCGGTGGCGGTGGCCGAGCAACTCGCCGCGGGCAGGGAACAGGGCCCCGGCGTGCCGCGCCAGCGCTACCGCGGAGCTCCTGCGATGCTCCACCTCCGAGGTGGGACGGCCCCTCTGATCCGGCTCCTCCTCTCGCCCCTTCTCTCACGCCCAACCCTAACCCGGCTATGGCGCCCTTGTTGCCGGCGCCTCTCTTGCTGCCGCTGGTGCCACATCCGAGGGAGCAAGAGCAGCAGGAGAATGCTGAGGAAGGAGAAGAACAGAGGCCGAGGCCGACGCCGACAACCATGGAAAAGAAGGTTGTAGAGCCTTCAAAGAAGAAGAAATTTGTGGATTTGAAATCAATGTGGGGTAGAGCTGAAAAGAAACTGAAGTCTATAGTTGATAGCAATAATATTTCTGAGCATTCAGCTAGGAGGAAAGACCCTGAACCTGCTACTATACATGCACCTGCAACTAAAGAGATTGGGTGTAGTAGAGCATGTGAAGTTGGATTTGCACAAACAGAAACTCAAGTGCCCTATGAAAGTATAGAAGTATCAAGACCTCAAGATGTAGATGGCAGCATAGAAGTATCTAAACCTCATGTTGCAAATTCAGAATCTGAAGAGGAAGATGATTGGCTAGAAGATGTTGATGAGGATGTTGGTTTTCTTCCACATGATCCTGGAAAGAGGATTGCCATCTCAGATTATAGTGTGTATCAGCAAGATGAAGTGAGGATGAAGTATATTGCACTTGGGCCTTGTCGACCACCACTAGAGCAATTTCCTCAAAGAAATTGTGGAGTTGGCACTTTGCTTGCGTTATGTTGACAAGAAAGGGAGGGTGGTTGAGCGCCTTCTTGGTATTGTGCATGTTGAGAATACTACAGCTTTGATACTTAGAGATGCTATCAAGAATTTACTAATGCAACAATCATTGAGCTTGTCTAAAGTTCGTGGTCAAGGATATGATGGGGCTAGTAACATGAAGGGTGAGGTTAATGGTCTAAAGAAGCTGATTATGAATGAATCTCCTTCTGCTTATTATGTTCATTGTTTTGCACATCAACTACAATTAACTCTTGTGGCCGTTGCTAGGGAGAATGGTGATTGTGTTTGGTTTTTTGAGTAACTTGGGTATTTGTTGAATACTATTGGGATTTCTTGTAAGAAACATCAAATGCTTTGAGTTGCTCAAGCTCAAGAGATTGTAGAAGCTTTGGAATTGGGTGAAATTGAAAGTGGGCAGGGTCTGAATCAAGAGATGGGTTTGGGTAGGCCAGGAGATACACGTTGGGGATCTCACTACAAAACAGTGCAACATATTCTTATTATGTATCGCTCAATCCGGAAGGTTCTACTACAAGTTGGAAAAGATCGTTCACAAAGCACGGAAGCTATAAAAGCTCAAACTGCATTACAATCATTTGTGTCATTTGAGATTGTTTTCATGGCACACTTGTTGAACACTATTCTTGGATACACAGATGACTTAAACACAGCTTTGCAAAGGAGGGCGCAAGATATTGTGAATGCGGTTGAGCTCATTGTTTTGACAAAGATGCAATTGGAGATGTTGCGGCAAGATGATGGGTGGGAGAATTTTTTAAAAAAAGTCACCTCTTTTTTATGAAGAACGAAGTCAAAGTTCCTCAGATGGATGCTAGGTACAAGCCGGTTGGAAGATCACCAAGCTTCTTTGGTAAAGTGCAGAATCTTCACCGCTTTAAAATTGAAATGTTTTTGAGTGTTATTGATAGACAACTTAGAGAACTAAATGACAGATTTGATGAGGTGAACACAGATTTACTTGTTTGCGTGGCTTCATTCAATCCCACTAATTCATTTGGTTCTTTTGACAAGGAAATGTTGGTTAAACTTGCACAATTCTATCCCAATGACTTCTCAGCCAATGACATCATGCACCTACCTATTCAGCTTGATCGTTTTATTATTGATATGCGTAGAGATGAAAGGTTTAGAGAAGTGAACACCATTGCTGAACTTTCGGTCAAGCTTGTTGATACAAATAAGCATATCAATTACACACTTGTCTACAAGCTACTGAAATTGGTGCTAGTCCTTCCTGTAGCAACTGCAAGTGTTGAAAATGTATTCTCCACAATGAATTATGTCAAGAACAAGCAAAGAAATAGAATAGGAGATGAATACTTGAATGATTGATTGGTAACATTTCTTGAATGAGATTGTTTTCAACAAGTTCCTGATGAAGACATAATACGTCATTTCCTGTCAATAAAGGCTCGTAGAGTCAAGTTGTAACAACTTGTGTTGATTTTTCAGAACATGGACAGGATCACACTATCTTATATAATATATGTTGCTGATGGGTATCATTCAATGGCATTTTCTTCCTCTGTATTGGATCCAATCTTTATGGTGGTGCAGCTATACGCAATGACGCCAAGATTTCTCCAAGACAGAAAAGCACTACAGCACAGGAGTGTGACCTTGCAGTTTCCAGCCATTGATTAATTCTATCAGCGGGCTTTCTTGTTTGGACATAACATTCCAAGAAGCAGCTGCCAGCGATCACCAAGGAACCAAATGTCCTCCAAGCAATTGATCACGGAAGCAACCTACGAGTTACAATGGGTAGCCCATCCACTGGAATCCTGCAGCTTCCCATTCCTATGGCTTTTCTCTAACTTGCACCAGAGAACGCACAACCACGACAGACTAAATTGAATTACTCAAGCCCACATTTTCATTGAGGAGGTATAGAGAGCTAGCGTGTGTTGTGAGCAAGCAGAACAATGTTATGCCATATGCGTCTGGTTTTGTAGGAACGCACCGCTTCTACTGAAATTAATAATGGTATTGCTATAGTA]
consensusID : consensus_7100#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2381 fasta sequence
[TTCTCAAAAAAAGAAAAACAAAGCACAAGGAAGAGGCCATGAGGAGCGGCGGCGGCGGCGGCCGAGCAACTCGCGGTTAGCAGGGAACGGCGCCTCAGTGCACCGCGCCGCCGCGGAACTCTTGCGATGCTCCACCTCCACGGCAGGACGGCTTCTCCGACTCGGCTCCTCCTCTTGCCCCTTCTCTCGCCGCTTCCCTCACGCCCAACCCTAACCCGGCCCTGGCACCCTTGCCGCCAGCACCTCTCTTGCTGCCACTGGTGCCGCATCCGGGGAAGCAAGTGCAGCAGGAGAATGCTGAGGAAGGAGAAGAACCGAGGCCAACGCCGACAGCCATGGAAAAGAAGGTGGTAGAGCCTTCAGAGAAGAAGACATTTGTGGATTTGAAATCAATGTGGGGTAGAGCTGAAAAGAAACTAAAGCCTATAGTTGACAGCAATAATATTTCTGAGCATTCAGTTGTGAGGAAAGACACTGAACCTACTACACATGCACCTGCAACTGAGAAGATTGGGTGTAGTAGAGCATGTGAAGTTGGATTTGCAGGAACAGAAACTCATGTGCCCTATGAAAGTATAGAAGTATCAAGACCTCAAGATATAGATGGCAACATAGAAATATCCAAACCTCATGTTGCAATTTCAGAATCTAAAGAGGAAGATTGGCTAGAAGATGTTGATGAGGATGTTGGTTTTCTACCACATGATCCTGGAAAGAGGATTGCCATCTCAGATTATAGTGTGAATCAGCAAGATGCAGTGAGGATGAAGTATATTGCACTTGGGCCTTGTCGACCACCACTAGAGCAATTTCCTCAAAGAAATTGTGGAGGTAAACGTCGTTTCATAAGTAGCTGGTTTGATAAGTATAGTTGGCTTGAATATAGCGAGGAAAAGGATGTTGCATTCTGTTTTGTTTGCTACTTGTTCAAAGATAGAACTAATTATGTTGGTGGGGATAGTTATGTGAATGAGGGCTTTAGACAATGAAACCATTTGGATAGATTTGATAAGCATGTTGGTTCTGTTAGTAGTGCACATAATCTAGCTCAAGAGAAATATAATATGTCGATCATTAGACCTAATACAACAATTGGTGAGAATTTAAGGAAGAGAAGCAAACATGACAAGGTTGTTTATAAGGCCCGCTTAACTTACTCACTTAAGTGCTTGAGATTTCTTTTACGGCAAGGGTTGGCTTGTCGTGGGCATAATGAAAGTGAAGAATCACTCAATAGAGGAAATTTTCTTGAGCTTCTAAATTGGTTGGCTAGAAATTTCAAAGAGGTCAACGAGGTTGTTCTAAAGAATGCTCCAAAGAATTGTAAAATGACATCCCCTAAGATACAAAAATAACTTATTGGATGTTGTGCTAGAGAAACTACTAAACTTCTCATGGAAGATCTTGGGGATGAGTTTTTTTTAATTCTTGCTGATGAGTCTAGCGATGTGTATCAAAATGAGCAGTTGGCACTTTGCTTGTGTTATATTGACAAGAAAGGGAGGGTTGTTGAGCGCTTTCCTGGTGTTGTGCATGTTGAGAATACTACAGCCTTGATACGTAGAGATGCAACAATCATTTAGCTTGTCTAAAGTTCATGGTCAAGGATATGATGGGGCTAGTAACATGAAGGGTGAGGTTAATGGTCTAAAGAAGCTGATTATGAATGAATCTCCTTCTGCTTATTATGTTCATTGTTTTGCACATCAACTATAGTTAACTCTTGTGGCTGTTGCTAGGGAGAATGGTGACTGTGTTTGGTTTTTTGAGCAACTTGGATATTTGTTGATTACTATTGGGATTTCTTGTAAGAAACATGAAATGCTTCGAGTTGCTCAAGCTCAAGAGATTGTAGAAGCTTTGGAATTTGGTGAAATTGAAAGTGGGCAGGGTCTGAATCAAGAGATGGGTTTAGGTAGGCCAGGAGATACACATTGGAGATCTCACTATAAAACAGTGCAACATATTCTTATTTTGTATCGCTCAATCCGGAAGGTCCTATTACAAGTTGGAAAAGATGACTTAAACATAACTTTGCAAAGGAGGGAGCAAGATATTGTGAATGCGGTTGAGCTCATTATTTTGACAAAGATGCAATTGGAGATGTTGCGGCAAGACGATGGGTGGGAGAATTTTTAAAAAGAAGTCACCTCTTTTTGTATGAAGAACGAAGTCAAAGTTCCTCATATGGATGCTAGATACAAGCAGTGGCGGACCCAGCATAAAAATTTAGCTATGGCGGATCATCACACCAGAACGAATATTTTAAAAATAAAGTAGCATTTTATTATACACAAACTATAATATGTTCGCACTTATTAGAATATATGCTATTAACGATGATTATAATCCTAAATTTCTGATGCAATTTTTACAAAAAA]
[+] EMBL CF308268 [TTCTCAAAAAAAGAAAAACAAAGCACAAGGAAGAGGCCATGAGGAGCGGCGGCGGCGGCGGCCGAGCAACTCGCGGTTAGCAGGGAACGGCGCCTCAGTGCACCGCGCCGCCGCGGAACTCTTGCGATGCTCCACCTCCACGGCAGGACGGCTTCTCCGACTCGGCTCCTCCTCTTGCCCCTTCTCTCGCCGCTTCCCTCACGCCCAACCCTAACCCGGCCCTGGCACCCTTGCCGCCAGCACCTCTCTTGCTGCCACTGGTGCCGCATCCGGGGAAGCAAGTGCAGCAGGAGAATGCTGAGGAAGGAGAAGAACCGAGGCCAACGCCGACAGCCATGGAAAAGAAGGTGGTAGAGCCTTCAGAGAAGAAGACATTTGTGGATTTGAAATCAATGTGGGGTAGAGCTGAAAAGAAACTAAAGCCTATAGTTGACAGCAATAATATTTCTGAGCATTCAGTTGTGAGGAAAGACACTGAACCTACTACACATGCACCTGCAACTGAGAAGATTGGGTGTAGTAGAGCATG ]
[+] EMBL AK068014 [ CAAGGAAGAGGCCATGAGGAGCGGCGGCGGCGGCGGCCGAGCAACTCGCGGTTAGCAGGGAACGGCGCCTCAGTGCACCGCGCCGCCGCGGAACTCTTGCGATGCTCCACCTCCACGGCAGGACGGCTTCTCCGACTCGGCTCCTCCTCTTGCCCCTTCTCTCGCCGCTTCCCTCACGCCCAACCCTAACCCGGCCCTGGCACCCTTGCCGCCAGCACCTCTCTTGCTGCCACTGGTGCCGCATCCGGGGAAGCAAGTGCAGCAGGAGAATGCTGAGGAAGGAGAAGAACCGAGGCCAACGCCGACAGCCATGGAAAAGAAGGTGGTAGAGCCTTCAGAGAAGAAGACATTTGTGGATTTGAAATCAATGTGGGGTAGAGCTGAAAAGAAACTAAAGCCTATAGTTGACAGCAATAATATTTCTGAGCATTCAGTTGTGAGGAAAGACACTGAACCTACTACACATGCACCTGCAACTGAGAAGATTGGGTGTAGTAGAGCATGTGAAGTTGGATTTGCAGGAACAGAAACTCATGTGCCCTATGAAAGTATAGAAGTATCAAGACCTCAAGATATAGATGGCAACATAGAAATATCCAAACCTCATGTTGCAATTTCAGAATCTAAAGAGGAAGATTGGCTAGAAGATGTTGATGAGGATGTTGGTTTTCTACCACATGATCCTGGAAAGAGGATTGCCATCTCAGATTATAGTGTGAATCAGCAAGATGCAGTGAGGATGAAGTATATTGCACTTGGGCCTTGTCGACCACCACTAGAGCAATTTCCTCAAAGAAATTGTGGAGGTAAACGTCGTTTCATAAGTAGCTGGTTTGATAAGTATAGTTGGCTTGAATATAGCGAGGAAAAGGATGTTGCATTCTGTTTTGTTTGCTACTTGTTCAAAGATAGAACTAATTATGTTGGTGGGGATAGTTATGTGAATGAGGGCTTTAGACAATGAAACCATTTGGATAGATTTGATAAGCATGTTGGTTCTGTTAGTAGTGCACATAATCTAGCTCAAGAGAAATATAATATGTCGATCATTAGACCTAATACAACAATTGGTGAGAATTTAAGGAAGAGAAGCAAACATGACAAGGTTGTTTATAAGGCCCGCTTAACTTACTCACTTAAGTGCTTGAGATTTCTTTTACGGCAAGGGTTGGCTTGTCGTGGGCATAATGAAAGTGAAGAATCACTCAATAGAGGAAATTTTCTTGAGCTTCTAAATTGGTTGGCTAGAAATTTCAAAGAGGTCAACGAGGTTGTTCTAAAGAATGCTCCAAAGAATTGTAAAATGACATCCCCTAAGATACAAAAATAACTTATTGGATGTTGTGCTAGAGAAACTACTAAACTTCTCATGGAAGATCTTGGGGATGAGTTTTTTTTAATTCTTGCTGATGAGTCTAGCGATGTGTATCAAAATGAGCAGTTGGCACTTTGCTTGTGTTATATTGACAAGAAAGGGAGGGTTGTTGAGCGCTTTCCTGGTGTTGTGCATGTTGAGAATACTACAGCCTTGATACGTAGAGATGCAACAATCATTTAGCTTGTCTAAAGTTCATGGTCAAGGATATGATGGGGCTAGTAACATGAAGGGTGAGGTTAATGGTCTAAAGAAGCTGATTATGAATGAATCTCCTTCTGCTTATTATGTTCATTGTTTTGCACATCAACTATAGTTAACTCTTGTGGCTGTTGCTAGGGAGAATGGTGACTGTGTTTGGTTTTTTGAGCAACTTGGATATTTGTTGATTACTATTGGGATTTCTTGTAAGAAACATGAAATGCTTCGAGTTGCTCAAGCTCAAGAGATTGTAGAAGCTTTGGAATTTGGTGAAATTGAAAGTGGGCAGGGTCTGAATCAAGAGATGGGTTTAGGTAGGCCAGGAGATACACATTGGAGATCTCACTATAAAACAGTGCAACATATTCTTATTTTGTATCGCTCAATCCGGAAGGTCCTATTACAAGTTGGAAAAGATGACTTAAACATAACTTTGCAAAGGAGGGAGCAAGATATTGTGAATGCGGTTGAGCTCATTATTTTGACAAAGATGCAATTGGAGATGTTGCGGCAAGACGATGGGTGGGAGAATTTTTAAAAAGAAGTCACCTCTTTTTGTATGAAGAACGAAGTCAAAGTTCCTCATATGGATGCTAGATACAAGCAGTGGCGGACCCAGCATAAAAATTTAGCTATGGCGGATCATCACACCAGAACGAATATTTTAAAAATAAAGTAGCATTTTATTATACACAAACTATAATATGTTCGCACTTATTAGAATATATGCTATTAACGATGA ]
[-] EMBL CF308269 [ TGAAATGCTTCGAGTTGCTCAAGCTCAAGAGATTGTAGAAGCTTTGGAATTTGGTGAAATTGAAAGTGGGCAGGGTCTGAATCAAGAGATGGGTTTAGGTAGGCCAGGAGATACACATTGGAGATCTCACTATAAAACAGTGCAACATATTCTTATTTTGTATCGCTCAATCCGGAAGGTCCTATTACAAGTTGGAAAAGATGACTTAAACATAACTTTGCAAAGGAGGGAGCAAGATATTGTGAATGCGGTTGAGCTCATTATTTTGACAAAGATGCAATTGGAGATGTTGCGGCAAGACGATGGGTGGGAGAATTTTTAAAAAGAAGTCACCTCTTTTTGTATGAAGAACGAAGTCAAAGTTCCTCATATGGATGCTAGATACAAGCAGTGGCGGACCCAGCATAAAAATTTAGCTATGGCGGATCATCACACCAGAACGAATATTTTAAAAATAAAGTAGCATTTTATTATACACAAACTATAATATGTTCGCACTTATTAGAATATATGCTATTAACGATGATTATAATCCTAAATTTCTGATGCAATTTTTACAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7100#0 ------------------------------------------TGAGGAGCGGTGGCGGTG 18
consensus_7100#1 TTCTCAAAAAAAGAAAAACAAAGCACAAGGAAGAGGCCATGAGGAGCGGCGGCGGCGGCG 60
*** **** ***** *
consensus_7100#0 GCCGAGCAACTCGCCGCGGGCAGGGAACAGGGCCCCGGCGTGCCGCGCCAGCGCTACCGC 78
consensus_7100#1 GCCGAGCAACTCGCGGTTAGCAGGGAACGGCGCCTCAGTGCACCGCGCCG------CCGC 114
************** * ********* * *** * * * ******* ****
consensus_7100#0 GGAGCTCCTGCGATGCTCCACCTCCGAGGTGGGACGGCCCCTCTGATCCGGCTCCTCCTC 138
consensus_7100#1 GGAACTCTTGCGATGCTCCACCTCCACGGCAGGACGGCTTCTCCGACTCGGCTCCTCCTC 174
*** *** ***************** ** ******* *** ** ************
consensus_7100#0 TCGCCCCTTCTCTC------------ACGCCCAACCCTAACCCGGCTATGGCGCCCTTGT 186
consensus_7100#1 TTGCCCCTTCTCTCGCCGCTTCCCTCACGCCCAACCCTAACCCGGCCCTGGCACCCTTGC 234
* ************ ******************** **** ******
consensus_7100#0 TGCCGGCGCCTCTCTTGCTGCCGCTGGTGCCACATCCGAGGGAGCAAGAGCAGCAGGAGA 246
consensus_7100#1 CGCCAGCACCTCTCTTGCTGCCACTGGTGCCGCATCCGGGGAAGCAAGTGCAGCAGGAGA 294
*** ** ************** ******** ****** ** ****** ***********
consensus_7100#0 ATGCTGAGGAAGGAGAAGAACAGAGGCCGAGGCCGACGCCGACAACCATGGAAAAGAAGG 306
consensus_7100#1 ATGCTGAGGAAGGAGAAGAAC------CGAGGCCAACGCCGACAGCCATGGAAAAGAAGG 348
********************* ******* ********* ***************
consensus_7100#0 TTGTAGAGCCTTCAAAGAAGAAGAAATTTGTGGATTTGAAATCAATGTGGGGTAGAGCTG 366
consensus_7100#1 TGGTAGAGCCTTCAGAGAAGAAGACATTTGTGGATTTGAAATCAATGTGGGGTAGAGCTG 408
* ************ ********* ***********************************
consensus_7100#0 AAAAGAAACTGAAGTCTATAGTTGATAGCAATAATATTTCTGAGCATTCAGCTAGGAGGA 426
consensus_7100#1 AAAAGAAACTAAAGCCTATAGTTGACAGCAATAATATTTCTGAGCATTCAGTTGTGAGGA 468
********** *** ********** ************************* * *****
consensus_7100#0 AAGACCCTGAACCTGCTACTATACATGCACCTGCAACTAAAGAGATTGGGTGTAGTAGAG 486
consensus_7100#1 AAGACACTGAACCT---ACTACACATGCACCTGCAACTGAGAAGATTGGGTGTAGTAGAG 525
***** ******** **** **************** * ******************
consensus_7100#0 CATGTGAAGTTGGATTTGCACAAACAGAAACTCAAGTGCCCTATGAAAGTATAGAAGTAT 546
consensus_7100#1 CATGTGAAGTTGGATTTGCAGGAACAGAAACTCATGTGCCCTATGAAAGTATAGAAGTAT 585
******************** ************ *************************
consensus_7100#0 CAAGACCTCAAGATGTAGATGGCAGCATAGAAGTATCTAAACCTCATGTTGCAAATTCAG 606
consensus_7100#1 CAAGACCTCAAGATATAGATGGCAACATAGAAATATCCAAACCTCATGTTGCAATTTCAG 645
************** ********* ******* **** **************** *****
consensus_7100#0 AATCTGAAGAGGAAGATGATTGGCTAGAAGATGTTGATGAGGATGTTGGTTTTCTTCCAC 666
consensus_7100#1 AATCTAAAGAGGAAGAT---TGGCTAGAAGATGTTGATGAGGATGTTGGTTTTCTACCAC 702
***** *********** *********************************** ****
consensus_7100#0 ATGATCCTGGAAAGAGGATTGCCATCTCAGATTATAGTGTGTATCAGCAAGATGAAGTGA 726
consensus_7100#1 ATGATCCTGGAAAGAGGATTGCCATCTCAGATTATAGTGTGAATCAGCAAGATGCAGTGA 762
***************************************** ************ *****
consensus_7100#0 GGATGAAGTATATTGCACTTGGGCCTTGTCGACCACCACTAGAGCAATTTCCTCAAAGAA 786
consensus_7100#1 GGATGAAGTATATTGCACTTGGGCCTTGTCGACCACCACTAGAGCAATTTCCTCAAAGAA 822
************************************************************
consensus_7100#0 ATTGTGGAGTTGGCACTTTGCTTGCGTTATGTTGACAAGAAAGGGAGGGTGGTTGAGCGC 846
consensus_7100#1 ATTGTGGAGGTAA-ACGTCGTTT------------CATAAGTAGCTGGTTTGATAAGTA- 868
********* * ** * * ** ** * * ** * * * **
consensus_7100#0 CTTCTTGGTATTGTGCATGTTGAGAATACTACAGCTTTGATACTTAGAGATGCTATCAAG 906
consensus_7100#1 -TAGTTGGC-TTGAATATAGCGAGGAAA----AG----GATGTT---GCATTCTGTTTTG 915
* **** *** ** *** * * ** *** * ** ** * *
consensus_7100#0 AATTTACTAATGCAACAATCATTGAGCTTGTCTAAAGTTCGTGGTCAAGGATATGATGGG 966
consensus_7100#1 --TTTGCTACTTGTTCAAAGATAGAACTAATT--ATGTTGGTGGGGATAGTTATGT--GA 969
*** *** * *** ** ** ** * * *** **** * * **** *
consensus_7100#0 GCTAGTAACATGAAGGGTGAGGTTAATGGTCTAAAGAAGCTGATTATGAATGAATCTCCT 1026
consensus_7100#1 ATGAGGGCTTTAGACAATGA----AACCATTTGGATAGATTTGATAAGCATG---TTGGT 1022
** * * *** ** * * * * * ** * *** * *
consensus_7100#0 TCTGCTTATTATGTTCATTGTTTTGCACATCAACTACAATTAACTCTTGTGGCCGTTGCT 1086
consensus_7100#1 TCTGTTAGTAGTGCACATAATCTAGCTCAAGAGAAATA--TAA----TATGTCGATCATT 1076
**** * * ** *** * * ** ** * * * *** * ** * * *
consensus_7100#0 AGGGAGAATGGTGATTGTGTTTGGTTTTTTGAGTAACTTGGGTATTTGTTGAATACTATT 1146
consensus_7100#1 AGACCTAATA-CAACAATTGGTGAGAATTTAAGGAAGAGAAGCA-------AACA-TGAC 1127
** *** * * ** *** ** ** * * ** * *
consensus_7100#0 GGGATTTCTTGTAAGAAACATCAAATGCTTTGAGTTGCTCAAGCTCAAGAGATTGTAGAA 1206
consensus_7100#1 AAGGTTGTTTATAAGGCCCGCTTAAC----TTACTCACTTAAGTGCTTGAGATTTC---- 1179
* ** ** **** * ** * * * ** *** * ******
consensus_7100#0 GCTTTGGAATTGGGTGAAATTGAAAGTGGGCAGGGTCTGAATCAAGAGATGGGTTTGGGT 1266
consensus_7100#1 -TTTTACGGCAAGGGTTGGCTTGTCGTGGGCATAATGAAAGTGAAGAATCA---CTCAAT 1235
*** ** * ******* * * * **** * *
consensus_7100#0 AGGCCAGGAGATACACGTTGGGGATCTCACTACAAAACAGTGCAACATATTCTTATTATG 1326
consensus_7100#1 AG---AGGAAATTTTC-TTGAGCTTCTAA--ATTGGTTGGCTAGAAATTTCAAAGAGGTC 1289
** **** ** * *** * *** * * * * ** * *
consensus_7100#0 TATC-GCTCAATCCGGAAGGTTCTACTACAAGTTGGAAAAGATCGTTCACAAAGCACGGA 1385
consensus_7100#1 AACGAGGTTGTTCTAAAGAATGCTCCAAAGAATTGTAAAATGACATCCCCTAAGATACAA 1349
* * * ** * * ** * * * *** **** * * * * *** *
consensus_7100#0 AGCTATAAAAGCTCAAACTGCATTACAATCATTTGTGTCATTTGAGATTGTTTTCATGGC 1445
consensus_7100#1 AAATAACTTATTGGATGTTGTGCTAGAGAAACTACT--------AAACT--TCTCATGGA 1399
* ** * * ** ** * * * * * * * * ******
consensus_7100#0 ACA-CTTGTTGAACACTATTCTTGGATACACAGATGACTTAAACACAGCTTTGCAAAGGA 1504
consensus_7100#1 AGATCTTGGGGATGAGTTTTTTTTAATTC-TTGCTGA--TGAGTCTAGCGATGTGTATCA 1456
* * **** ** * * ** ** ** * * *** * * *** ** * *
consensus_7100#0 GGGCGCAAGATATTGTGAATGCGGTTGAGCTCATTGTTTTGACAAAGATGCAATTGGAGA 1564
consensus_7100#1 AAATG--AGCAGTTGGCACTTTGCTTG----TGTTATATTGACAAGAAAGGGA---GGGT 1507
* ** *** * * * *** ** * ******* * * * * *
consensus_7100#0 TGTTGCGGCAAGATGATGGGTGGGAGAATTTTTTAAAAAAAGTCACCTCTTTTTTATGAA 1624
consensus_7100#1 TGTTG-AGCGCTTTCCTGGTGTTGTGCATGTT---GAGAATACTACAGCCTTGATACGTA 1563
***** ** * *** * * ** ** * ** ** * ** ** * *
consensus_7100#0 GAACGAAGTCAAAGTTCCTCAGATGGATGCTAGGTACAAGCCGGTTGGAAGATCACCAAG 1684
consensus_7100#1 GA--GATGCAACAATCATTTAGCTTG-TCTAAAGTTCATG--GTCAAGGATATGATGGGG 1618
** ** * * * * * ** * * * * ** ** * * * * ** * *
consensus_7100#0 CTTCTTTGGTAAAGTGCAGAATCTTCACCGCTTTAAAATTGAAATGTTTTTGAGTGTTAT 1744
consensus_7100#1 CTAGTAACATGAAGGGTGAGGT---TAATGGTCTAAAG--AAGCTGATTATGAATG--AA 1671
** * * *** * * * * * **** * ** ** *** ** *
consensus_7100#0 TGATAGACAACTTAGAGAACTAAATGACAGATTTGATGAGGTGAACACAGATTTACTTGT 1804
consensus_7100#1 TCTCCTTCTGCTTATTATGTTCATTG-----TTTTGCACATCAACTATAG-TTAACTCTT 1725
* * **** * * ** *** * * ** ** *** *
consensus_7100#0 TTGCGTGGCTTCATTCAATCCCACTAATTCATTTGGTTCTTTTGACAAGGAAATGTTGGT 1864
consensus_7100#1 GTGGCTGTTGCTAGGGAGAATGGTGACTGTGTTTGGTTTTTTGAGCAAC------TTGGA 1779
** ** * * * * ******* *** *** ****
consensus_7100#0 TAAACTTGCACAATTCTATCCCAATGACTTCTCAGCCAATGACATCATGCACCTACCTAT 1924
consensus_7100#1 TA--TTTGTTGATTACTATTGGGATTTCTTGTAAG--AAACATGAAATGCTTCGAGTTGC 1835
** *** * * **** ** *** * ** ** * **** * * *
consensus_7100#0 TCAGCTTGATCGTTTTATTATTGATATGCGTAGAGATGAAAGGTTTAGAGAAGTGAACAC 1984
consensus_7100#1 TCAA---GCTCAAGAGATTGTAGA---------AGCTTTGGAATTTGGTGAAATTGAAA- 1882
*** * ** *** * ** ** * *** * *** * * *
consensus_7100#0 CATTGCTGAACTTTCGGTCAAGCTTGTTGATACAAATAAGCATATCAATTACACACTTGT 2044
consensus_7100#1 -GTGGGCAGGGTCTGAATCAAGAG-ATGGGTTTAGGTAGGC-CAGGAGATACACATTGGA 1939
* * * * ***** * * * * ** ** * * ****** * *
consensus_7100#0 CTACAAGCTACTGAAATTGGTGCTAGTCCTTCCTGTAGCAACTGCAAGTGTTGAAAATGT 2104
consensus_7100#1 GATCTCACTAT--AAAACAGTGCAACATATTCTTAT--------------TTTGTATCGC 1983
* *** *** **** * *** * * ** * *
consensus_7100#0 ATTCTCCACAATGAATTATGTCAAGAACAAGCAAAGAAATAGAATAGGAGATGAATACTT 2164
consensus_7100#1 TCAATCCGGAAGGTCCTATTACAAGT-----TGGAAAAGATGACTTAAACATAACTTTGC 2038
*** ** * *** **** * ** ** * * ** * *
consensus_7100#0 GAATGATTGATTGGTAACATTTCTTGAATGAGATTGTTTTCAACAAGTTCCTGATGAAGA 2224
consensus_7100#1 AAAGGAGGGA---GCAAGATATTGTGAATGCGGTTGAGCTCATTA---TTTTGACAAAGA 2092
** ** ** * ** ** * ****** * *** *** * * *** ****
consensus_7100#0 CATAATACGTCATTTCCTGTCAATAAAGGCTCGTAGAGTCAAGTTGTAACAACTTGTGTT 2284
consensus_7100#1 TGCAATTGGAGATGTTGCGGCAA--GACGATGGGTGGGAGAATTTTTAAAAAGAAGTCAC 2150
*** * ** * * *** * * * * * * ** ** *** ** **
consensus_7100#0 GATTTTTCAGAACATGGACAGGATCACACTATCTTATATAATATATGTTGCTGATGGGTA 2344
consensus_7100#1 CTCTTTTTGTATGAAGAACGAAGTCAAAGTTCCTCATATG---------GATGCTAGATA 2201
**** * * * ** *** * * ** **** * ** * * **
consensus_7100#0 TCATTCAATGGCATTTTCTTCCTCTGTATTGGATCCAATCTTTATGGTGGTGCAGCTATA 2404
consensus_7100#1 -CAAGCAGTGGCGG------ACCCAGCATAAAAATTTAGC--TATGGCGGATCATC---A 2249
** ** **** * * * ** * * * ***** ** ** * *
consensus_7100#0 CGCAATGACGCCAAGATTTCTCCAAGACAGAAAAGCACTACAGCACAGGAGTGTGACCTT 2464
consensus_7100#1 CACCAGAACG----AATATTTTAAAAATAAAGTAGCATTTTATTATACACAAACTATAAT 2305
* * * *** ** * * ** * * * **** * * * * * *
consensus_7100#0 GCAGTTTCCAGCCATTG--ATTAATTCTATCAGCGGGCTTTCTTGTTTGGACATAACATT 2522
consensus_7100#1 AT-GTTCGCACTTATTAGAATATATGCTATTAACGATGATTATAATCC-----TAAATTT 2359
*** ** *** ** ** **** * ** ** * * *** **
consensus_7100#0 CCAAGAAGCAGCTGCCAGCGATCACCAAGGAACCAAATGTCCTCCAAGCAATTGATCACG 2582
consensus_7100#1 CT--GATGCAATTTTTACAAAAAA------------------------------------ 2381
* ** *** * * * *
consensus_7100#0 GAAGCAACCTACGAGTTACAATGGGTAGCCCATCCACTGGAATCCTGCAGCTTCCCATTC 2642
consensus_7100#1 ------------------------------------------------------------
consensus_7100#0 CTATGGCTTTTCTCTAACTTGCACCAGAGAACGCACAACCACGACAGACTAAATTGAATT 2702
consensus_7100#1 ------------------------------------------------------------
consensus_7100#0 ACTCAAGCCCACATTTTCATTGAGGAGGTATAGAGAGCTAGCGTGTGTTGTGAGCAAGCA 2762
consensus_7100#1 ------------------------------------------------------------
consensus_7100#0 GAACAATGTTATGCCATATGCGTCTGGTTTTGTAGGAACGCACCGCTTCTACTGAAATTA 2822
consensus_7100#1 ------------------------------------------------------------
consensus_7100#0 ATAATGGTATTGCTATAGTA 2842
consensus_7100#1 --------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||