Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7373 cluster # 7373       Sequences # 4       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7373#0 length = 2016 sequences # 1  
 consensus_7373#1 length = 969 sequences # 2  
consensus_7373#2 length = 757 sequences # 1  
consensusID : consensus_7373#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2016
fasta sequence 
                              [CGTAGGCGGCGCATCCACGAGGCGCGCAAGAGCTAAGCTAATAATGCGGAATAGCGATGGATAGCTTCAATAGCTTGGAGCCTTGGATCTCCATATATATGCTCGTAGTAGCGCCATCACGGCCTTTTCTCTCTTCCTTCTCCTGCGGTATATGTGCTGCATATGTGCAAAAGCCTATGACTACTAGCTTGTTTGGAGTTTTTGTACCGATTGATCGAGTAACGTTTGCCCACGCACTCCGCGGGTGTTCGATGTATTCAACAATATTTTGAGCATGTGTGGAGGCCGGACGCGCATGTATGTTCGTGGTGGTGTGAGTGTAGCATGCGTAACGTGAATATAAGAGACTGTCCAAACATACTCCCTCCGTCCCAAAAAAAAGAAATCCAATATAGTATTGGATGGGACGTTTTCTAATACAATAAATCTGTACAGGAGTATGTCTAGATTTATTATACTATGAAACGTCTAATTCAATACTAGATTGAGATTATTTTTTGAGACGGAGGGAGTACTTTCGTTCGAGCTATATATATATGGCCTATGGCTAATAAGTGTAAAATCGAAAAGTAAATCGAACAAGCAAAACAAAATTATATGTACGTACAACTATATATCTATGTTATTAATCAGTTTAAAAGACCGATGCTAAAAAAATATGCTAAATAAATGAACCCTAAATTAACCCTATAACTATGTTTTAAAAAACTAAATTTTGACCGTGGCTGACTGTGACCCTGCCAACATACAATTGATAGTCTCTCGGTTGCATAATTCGTAGTTACCATATTCCTTGCATGTGGGTCTCGTGGTCTTGCGTATGTGTGGTTAACTGCATGCATGTGATCAATAAAAATTTGAGTATTTTTACTATGCATTGGGTCCAGGTACCTAGGTACCTGCAATCAGAGCCATTCATCGAGTGTGATATTCAATTGTTGTCAATCTTCGGTACTATCAGGTACAAGAATCCTCTTGGCGGTACCCCCTTCGTTGAACAAGCGGAAGTGCAAAACTGGGTTTAAAATAGTTTTTTTTTTGTGCTGATTCCGCACCTCAGGCTCTTCCCCATCGCCGCGGTGCAATCAACCTTGCTAGCCGAATCCAAGCTACCGAGACACCTTCAACTCCCTCGCTACAAACTGCAGCCACGACGACGTGCTCATCAGCGCGGCAGTAACCTCAGGAAACATGGCTAATGTTGGGTCGCCGGCTCGACTACTTCCCAGCCTTCTCCCACCTCCTTGGTGCTAGTACATCTGAGGTAATTGTTGGGTGACGCGACGACTTTGGGGGAACCTCCTAACCGCCCTCCCCAGTACCCTCCCAACGACACAGCTACTTCCTCCCTCCTCCCTGATCAAATCTCAAACGAACCGAGATTAGCAACAGTTGCAAGTCCAGCTTCATCTCAACCCACCATCAGGAATGAAGGCGAGGTCAAGAGCAGGTACAAGTCCAGCTTCATCTTGCTAAGAATCATAAGAAGCGAATCCTGGAGGTGGTGATCAGGGACTTCTGCTATGCCGCAGCAGCAGTCAGGTCGTGGTGCCATCGGTAGCCTTCAACCCTAAATACAAACCGTCGCCCGTGAAGGATAGTACGAGACTAGGAGGTCGCGAGGGTCTTGTTTCCTTCTTTTTCCTATTGTGTCCTTGCTTATTCAACGGTTAGATTTTGTTTGGTACCTTGCAGTACCAGTATTTGGAGGTACCATTTAATGGACCATAAAAACACTCCAAAAAATTACATGCATCTTGTGTGTTACTAGGGAGAGGAGTTCCACTCTTCTCTCTCACCTTCTCTCCCTAACTCCCGAAGACTTGGATAGAGTGGGGCTTTGTGTTGGTTGTAAGGGTCGGGTTTTGGCTGATCTCGGCTATATTCTGTTGTTGGCCTAGCGGCGGTCGGTCACGCTTAGCGGCGGCTGGTCTGGTGATAGCCTTCTCCTGGATGTGTGTTGGTGCTGTCGGTGTATGTGTGGTGGTATACTTTTTCATTTTCCTGGTTACGACC]

[+] EMBL AK068691             [CGTAGGCGGCGCATCCACGAGGCGCGCAAGAGCTAAGCTAATAATGCGGAATAGCGATGGATAGCTTCAATAGCTTGGAGCCTTGGATCTCCATATATATGCTCGTAGTAGCGCCATCACGGCCTTTTCTCTCTTCCTTCTCCTGCGGTATATGTGCTGCATATGTGCAAAAGCCTATGACTACTAGCTTGTTTGGAGTTTTTGTACCGATTGATCGAGTAACGTTTGCCCACGCACTCCGCGGGTGTTCGATGTATTCAACAATATTTTGAGCATGTGTGGAGGCCGGACGCGCATGTATGTTCGTGGTGGTGTGAGTGTAGCATGCGTAACGTGAATATAAGAGACTGTCCAAACATACTCCCTCCGTCCCAAAAAAAAGAAATCCAATATAGTATTGGATGGGACGTTTTCTAATACAATAAATCTGTACAGGAGTATGTCTAGATTTATTATACTATGAAACGTCTAATTCAATACTAGATTGAGATTATTTTTTGAGACGGAGGGAGTACTTTCGTTCGAGCTATATATATATGGCCTATGGCTAATAAGTGTAAAATCGAAAAGTAAATCGAACAAGCAAAACAAAATTATATGTACGTACAACTATATATCTATGTTATTAATCAGTTTAAAAGACCGATGCTAAAAAAATATGCTAAATAAATGAACCCTAAATTAACCCTATAACTATGTTTTAAAAAACTAAATTTTGACCGTGGCTGACTGTGACCCTGCCAACATACAATTGATAGTCTCTCGGTTGCATAATTCGTAGTTACCATATTCCTTGCATGTGGGTCTCGTGGTCTTGCGTATGTGTGGTTAACTGCATGCATGTGATCAATAAAAATTTGAGTATTTTTACTATGCATTGGGTCCAGGTACCTAGGTACCTGCAATCAGAGCCATTCATCGAGTGTGATATTCAATTGTTGTCAATCTTCGGTACTATCAGGTACAAGAATCCTCTTGGCGGTACCCCCTTCGTTGAACAAGCGGAAGTGCAAAACTGGGTTTAAAATAGTTTTTTTTTTGTGCTGATTCCGCACCTCAGGCTCTTCCCCATCGCCGCGGTGCAATCAACCTTGCTAGCCGAATCCAAGCTACCGAGACACCTTCAACTCCCTCGCTACAAACTGCAGCCACGACGACGTGCTCATCAGCGCGGCAGTAACCTCAGGAAACATGGCTAATGTTGGGTCGCCGGCTCGACTACTTCCCAGCCTTCTCCCACCTCCTTGGTGCTAGTACATCTGAGGTAATTGTTGGGTGACGCGACGACTTTGGGGGAACCTCCTAACCGCCCTCCCCAGTACCCTCCCAACGACACAGCTACTTCCTCCCTCCTCCCTGATCAAATCTCAAACGAACCGAGATTAGCAACAGTTGCAAGTCCAGCTTCATCTCAACCCACCATCAGGAATGAAGGCGAGGTCAAGAGCAGGTACAAGTCCAGCTTCATCTTGCTAAGAATCATAAGAAGCGAATCCTGGAGGTGGTGATCAGGGACTTCTGCTATGCCGCAGCAGCAGTCAGGTCGTGGTGCCATCGGTAGCCTTCAACCCTAAATACAAACCGTCGCCCGTGAAGGATAGTACGAGACTAGGAGGTCGCGAGGGTCTTGTTTCCTTCTTTTTCCTATTGTGTCCTTGCTTATTCAACGGTTAGATTTTGTTTGGTACCTTGCAGTACCAGTATTTGGAGGTACCATTTAATGGACCATAAAAACACTCCAAAAAATTACATGCATCTTGTGTGTTACTAGGGAGAGGAGTTCCACTCTTCTCTCTCACCTTCTCTCCCTAACTCCCGAAGACTTGGATAGAGTGGGGCTTTGTGTTGGTTGTAAGGGTCGGGTTTTGGCTGATCTCGGCTATATTCTGTTGTTGGCCTAGCGGCGGTCGGTCACGCTTAGCGGCGGCTGGTCTGGTGATAGCCTTCTCCTGGATGTGTGTTGGTGCTGTCGGTGTATGTGTGGTGGTATACTTTTTCATTTTCCTGGTTACGACC]




>consensus_7373#0
CGTAGGCGGCGCATCCACGAGGCGCGCAAGAGCTAAGCTAATAATGCGGAATAGCGATGG
ATAGCTTCAATAGCTTGGAGCCTTGGATCTCCATATATATGCTCGTAGTAGCGCCATCAC
GGCCTTTTCTCTCTTCCTTCTCCTGCGGTATATGTGCTGCATATGTGCAAAAGCCTATGA
CTACTAGCTTGTTTGGAGTTTTTGTACCGATTGATCGAGTAACGTTTGCCCACGCACTCC
GCGGGTGTTCGATGTATTCAACAATATTTTGAGCATGTGTGGAGGCCGGACGCGCATGTA
TGTTCGTGGTGGTGTGAGTGTAGCATGCGTAACGTGAATATAAGAGACTGTCCAAACATA
CTCCCTCCGTCCCAAAAAAAAGAAATCCAATATAGTATTGGATGGGACGTTTTCTAATAC
AATAAATCTGTACAGGAGTATGTCTAGATTTATTATACTATGAAACGTCTAATTCAATAC
TAGATTGAGATTATTTTTTGAGACGGAGGGAGTACTTTCGTTCGAGCTATATATATATGG
CCTATGGCTAATAAGTGTAAAATCGAAAAGTAAATCGAACAAGCAAAACAAAATTATATG
TACGTACAACTATATATCTATGTTATTAATCAGTTTAAAAGACCGATGCTAAAAAAATAT
GCTAAATAAATGAACCCTAAATTAACCCTATAACTATGTTTTAAAAAACTAAATTTTGAC
CGTGGCTGACTGTGACCCTGCCAACATACAATTGATAGTCTCTCGGTTGCATAATTCGTA
GTTACCATATTCCTTGCATGTGGGTCTCGTGGTCTTGCGTATGTGTGGTTAACTGCATGC
ATGTGATCAATAAAAATTTGAGTATTTTTACTATGCATTGGGTCCAGGTACCTAGGTACC
TGCAATCAGAGCCATTCATCGAGTGTGATATTCAATTGTTGTCAATCTTCGGTACTATCA
GGTACAAGAATCCTCTTGGCGGTACCCCCTTCGTTGAACAAGCGGAAGTGCAAAACTGGG
TTTAAAATAGTTTTTTTTTTGTGCTGATTCCGCACCTCAGGCTCTTCCCCATCGCCGCGG
TGCAATCAACCTTGCTAGCCGAATCCAAGCTACCGAGACACCTTCAACTCCCTCGCTACA
AACTGCAGCCACGACGACGTGCTCATCAGCGCGGCAGTAACCTCAGGAAACATGGCTAAT
GTTGGGTCGCCGGCTCGACTACTTCCCAGCCTTCTCCCACCTCCTTGGTGCTAGTACATC
TGAGGTAATTGTTGGGTGACGCGACGACTTTGGGGGAACCTCCTAACCGCCCTCCCCAGT
ACCCTCCCAACGACACAGCTACTTCCTCCCTCCTCCCTGATCAAATCTCAAACGAACCGA
GATTAGCAACAGTTGCAAGTCCAGCTTCATCTCAACCCACCATCAGGAATGAAGGCGAGG
TCAAGAGCAGGTACAAGTCCAGCTTCATCTTGCTAAGAATCATAAGAAGCGAATCCTGGA
GGTGGTGATCAGGGACTTCTGCTATGCCGCAGCAGCAGTCAGGTCGTGGTGCCATCGGTA
GCCTTCAACCCTAAATACAAACCGTCGCCCGTGAAGGATAGTACGAGACTAGGAGGTCGC
GAGGGTCTTGTTTCCTTCTTTTTCCTATTGTGTCCTTGCTTATTCAACGGTTAGATTTTG
TTTGGTACCTTGCAGTACCAGTATTTGGAGGTACCATTTAATGGACCATAAAAACACTCC
AAAAAATTACATGCATCTTGTGTGTTACTAGGGAGAGGAGTTCCACTCTTCTCTCTCACC
TTCTCTCCCTAACTCCCGAAGACTTGGATAGAGTGGGGCTTTGTGTTGGTTGTAAGGGTC
GGGTTTTGGCTGATCTCGGCTATATTCTGTTGTTGGCCTAGCGGCGGTCGGTCACGCTTA
GCGGCGGCTGGTCTGGTGATAGCCTTCTCCTGGATGTGTGTTGGTGCTGTCGGTGTATGT
GTGGTGGTATACTTTTTCATTTTCCTGGTTACGACC

consensusID : consensus_7373#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 969
fasta sequence 
                              [GGNTTACCTTTAAATTTTTTTGTGCTGATTCCGCACCTCAGGCTCTTCCCCATCGCCGCGGTGCAATCAACCTTGCTAGCCGAATCCAAGCTACCGAGACACCTTCAACTCCCTCGCTACAAACTGCAGCCACGACGACGTGCTCATCAGCGCGGCAGTAACCTCAGGAAACATGGCTAATGTTGGGTCGCCGGCTCGACTACTTCCCAGCCTTCTCCCACCTCCTTGGTGCTAGTACATCTGAGGTAATTGTTGGGTGACGCGACGACTTTGGGGGAACCTCCTAACCGCCCTCCCCAGTACCCTCCCAACGACACAGCTACTTCCTCCCTCCTCCCTGATCAAATCTCAAACGAACCGAGATTAGCAACAGTTGCAAGTCCAGCTTCATCTCAACCCACCATCAGGAATGAAGGCGAGGTCAAGAGCAGAATCATAAGAAGCGAATCCTGGAGGTGGTGATCAGGGACTTCTGCTATGCCGCAGCAGCAGTCAGGTCGTGGTGCTATCGGTAGCCTTCAACCCTAAATACAAACCGTCGCCCGTGAAGGATAGTACGAGACTAGGAGGTCGCGAGGGTCTTGTTTCCTTCTTTTTCCTATTGTGTCCTTGCTTATTCAACGGATAGATTTTGTTTGGTACCTTGCAGTACCAGTATTTGGAGGTACCATTTAATGGACCATAAAAACACTCCAAAAAATTACATGCATCTTGTGTGTTACTAGGGAGAGGAGTTCCACTCTTCTCTCTCACCTTCTCTCCCTAACTCCCGAAGACTTGGATAGAGTGGGGCTTTGTGTTGGTTGTAAGGGTCGGGTTTTGGCTGATCTCGGCTATATTCTGTTGTTGGCCTAGCGGCGGTCGGTCACGCTTAGCGGCGGCTGGTCTGGTGATAGCCTTCTCCTGGATGTGTGTTGGTGCTGTCGGTGTATGTGTGGTGGTATNCTTTTTCATTTTCCTCTTTAAGGC]

[+] EMBL CB675037             [GGNTTACCTTTAAATTTTTTTGTGCTGATTCCGCACCTCAGGCTCTTCCCCATCGCCGCGGTGCAATCAACCTTGCTAGCCGAATCCAAGCTACCGAGACACCTTCAACTCCCTCGCTACAAACTGCAGCCACGACGACGTGCTCATCAGCGCGGCAGTAACCTCAGGAAACATGGCTAATGTTGGGTCGCCGGCTCGACTACTTCCCAGCCTTCTCCCACCTCCTTGGTGCTAGTACATCTGAGGTAATTGTTGGGTGACGCGACGACTTTGGGGGAACCTCCTAACCGCCCTCCCCAGTACCCTCCCAACGACACAGCTACTTCCTCCCTCCTCCCTGATCAAATCTCAAACGAACCGAGATTAGCAACAGTTGCAAGTCCAGCTTCATCTCAACCCACCATCAGGAATGAAGGCGAGGTCAAGAGCAGAATCATAAGAAGCGAATCCTGGAGGTGGTGATCAGGGACTTCTGCTATGCCGCAGCAGCAGTCAGGTCGTGGTGCTATCGGTAGCCTTCAACCCTAAATACAAACCGTCGCCCGTGAAGGATAGTACGAGACTAGGAGGTCGCGAGGGTCTTGTTTCCTTCTTTTTCCTATTGTGTCCTTGCTTATTCAACGGATAGATTTTGTTTGGTACCTTGCAGTACCAGTATTTGGAGGTACCATTTAATGGACCATAAAAACACTCCAAAAAATTACATGCATCTTGTGTGTTACTAGGGAGAGGAGTTCCACTCTTCTCTCTCACC                                                                                                                                                                                                                       ]
[-] EMBL CB675038             [                                                                                                                                                                                                                                                                                                         CAGTACCCTCCCAACGACACAGCTACTTCCTCCCTCCTCCCTGATCAAATCTCAAACGAACCGAGATTAGCAACAGTTGCAAGTCCAGCTTCATCTCAACCCACCATCAGGAATGAAGGCGAGGTCAAGAGCAGAATCATAAGAAGCGAATCCTGGAGGTGGTGATCAGGGACTTCTGCTATGCCGCAGCAGCAGTCAGGTCGTGGTGCTATCGGTAGCCTTCAACCCTAAATACAAACCGTCGCCCGTGAAGGATAGTACGAGACTAGGAGGTCGCGAGGGTCTTGTTTCCTTCTTTTTCCTATTGTGTCCTTGCTTATTCAACGGTTAGATTTTGTTTGGTCCCTTGCAGTACCAGTATTTGGAGGTACCATTTAATGGACCATAAAAACACTCCAAAAAATTACATGCATCTTGTGTGTTACTAGGGAGAGGAGTTCCACTCTTCTCTCTCCCCTTCTCTCCCTAACTCCCGAAGACTTGGATAGAGTGGGGCTTTGTGTTGGTTGTAAGGGTCGGGTTTTGGCTGATCTCGGCTATATTCTGTTGTTGGCCTAGCGGCGGTCGGTCACGCTTAGCGGCGGCTGGTCTGGTGATAGCCTTCTCCTGGATGTGTGTTGGTGCTGTCGGTGTATGTGTGGTGGTATNCTTTTTCATTTTCCTCTTTAAGGC]




>consensus_7373#1
GGNTTACCTTTAAATTTTTTTGTGCTGATTCCGCACCTCAGGCTCTTCCCCATCGCCGCG
GTGCAATCAACCTTGCTAGCCGAATCCAAGCTACCGAGACACCTTCAACTCCCTCGCTAC
AAACTGCAGCCACGACGACGTGCTCATCAGCGCGGCAGTAACCTCAGGAAACATGGCTAA
TGTTGGGTCGCCGGCTCGACTACTTCCCAGCCTTCTCCCACCTCCTTGGTGCTAGTACAT
CTGAGGTAATTGTTGGGTGACGCGACGACTTTGGGGGAACCTCCTAACCGCCCTCCCCAG
TACCCTCCCAACGACACAGCTACTTCCTCCCTCCTCCCTGATCAAATCTCAAACGAACCG
AGATTAGCAACAGTTGCAAGTCCAGCTTCATCTCAACCCACCATCAGGAATGAAGGCGAG
GTCAAGAGCAGAATCATAAGAAGCGAATCCTGGAGGTGGTGATCAGGGACTTCTGCTATG
CCGCAGCAGCAGTCAGGTCGTGGTGCTATCGGTAGCCTTCAACCCTAAATACAAACCGTC
GCCCGTGAAGGATAGTACGAGACTAGGAGGTCGCGAGGGTCTTGTTTCCTTCTTTTTCCT
ATTGTGTCCTTGCTTATTCAACGGATAGATTTTGTTTGGTACCTTGCAGTACCAGTATTT
GGAGGTACCATTTAATGGACCATAAAAACACTCCAAAAAATTACATGCATCTTGTGTGTT
ACTAGGGAGAGGAGTTCCACTCTTCTCTCTCACCTTCTCTCCCTAACTCCCGAAGACTTG
GATAGAGTGGGGCTTTGTGTTGGTTGTAAGGGTCGGGTTTTGGCTGATCTCGGCTATATT
CTGTTGTTGGCCTAGCGGCGGTCGGTCACGCTTAGCGGCGGCTGGTCTGGTGATAGCCTT
CTCCTGGATGTGTGTTGGTGCTGTCGGTGTATGTGTGGTGGTATNCTTTTTCATTTTCCT
CTTTAAGGC

consensusID : consensus_7373#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 757
fasta sequence 
                              [CCACGAGGCGCTCAAGAGCTAAGCTAATAATGCGGAATAGCGATGGATAGCTTCAATAGCTTGGAGCCTTGGATCTCCATATATATGCTCGTAGTAGCGCCATCACGGCCTTTTCTCTCTTCCTTCTCCTGCGGTATATGTGCTGCATATGTGCAAAAGCCTATGACTACTAGCTTGTTTGGAGTTTCTGTACCGATTGATCGAGTAACGTTTGCCCACGCACTCCGCGGGTGTTCGATGTATTCAACAATATTTTGAGCATGTGTGGAGGCCGGACGCGCATGTACAAGAATCCTCTTGGCGGTACCCCCTTCGTTGAACAAGCGGAAGTGCAAAACTGGGTTTAAAATAGTTTTTTTTTTGTGCTGATTCCGCACCTCAGGCTCTTCCCCATCGCCGCGGTGCAATCAACCTTGCTAGCCGAATCCAAGCTACCGAGACACCTTCAACTCCCTCGCTACAAACTGCAGCCACGACGACGTGCTCATCAGCGCGGCAGTAACCTCAGGAAACATGGCTAATGTTGGGTCGCCGGCTCGACTACTTCCCAGCCTTCTCCCACCTCCTTGGTGCTAGTACATCTGAGGTAATTGTTGGGTGACGCGACGACTTTGGGGGAACCTCCTAACCGCCCTCCCCAGTACCCTCCCAACGACACAGCTACTTCCTCCCTCCTCCCTGATCAAATCTCAAACGAACCGAGATTAGCAACAGTTGCAAGTCCAGCTTCATCTNCACCCACCATCAGGAATGAAGG]

[+] EMBL CB669814             [CCACGAGGCGCTCAAGAGCTAAGCTAATAATGCGGAATAGCGATGGATAGCTTCAATAGCTTGGAGCCTTGGATCTCCATATATATGCTCGTAGTAGCGCCATCACGGCCTTTTCTCTCTTCCTTCTCCTGCGGTATATGTGCTGCATATGTGCAAAAGCCTATGACTACTAGCTTGTTTGGAGTTTCTGTACCGATTGATCGAGTAACGTTTGCCCACGCACTCCGCGGGTGTTCGATGTATTCAACAATATTTTGAGCATGTGTGGAGGCCGGACGCGCATGTACAAGAATCCTCTTGGCGGTACCCCCTTCGTTGAACAAGCGGAAGTGCAAAACTGGGTTTAAAATAGTTTTTTTTTTGTGCTGATTCCGCACCTCAGGCTCTTCCCCATCGCCGCGGTGCAATCAACCTTGCTAGCCGAATCCAAGCTACCGAGACACCTTCAACTCCCTCGCTACAAACTGCAGCCACGACGACGTGCTCATCAGCGCGGCAGTAACCTCAGGAAACATGGCTAATGTTGGGTCGCCGGCTCGACTACTTCCCAGCCTTCTCCCACCTCCTTGGTGCTAGTACATCTGAGGTAATTGTTGGGTGACGCGACGACTTTGGGGGAACCTCCTAACCGCCCTCCCCAGTACCCTCCCAACGACACAGCTACTTCCTCCCTCCTCCCTGATCAAATCTCAAACGAACCGAGATTAGCAACAGTTGCAAGTCCAGCTTCATCTNCACCCACCATCAGGAATGAAGG]




>consensus_7373#2
CCACGAGGCGCTCAAGAGCTAAGCTAATAATGCGGAATAGCGATGGATAGCTTCAATAGC
TTGGAGCCTTGGATCTCCATATATATGCTCGTAGTAGCGCCATCACGGCCTTTTCTCTCT
TCCTTCTCCTGCGGTATATGTGCTGCATATGTGCAAAAGCCTATGACTACTAGCTTGTTT
GGAGTTTCTGTACCGATTGATCGAGTAACGTTTGCCCACGCACTCCGCGGGTGTTCGATG
TATTCAACAATATTTTGAGCATGTGTGGAGGCCGGACGCGCATGTACAAGAATCCTCTTG
GCGGTACCCCCTTCGTTGAACAAGCGGAAGTGCAAAACTGGGTTTAAAATAGTTTTTTTT
TTGTGCTGATTCCGCACCTCAGGCTCTTCCCCATCGCCGCGGTGCAATCAACCTTGCTAG
CCGAATCCAAGCTACCGAGACACCTTCAACTCCCTCGCTACAAACTGCAGCCACGACGAC
GTGCTCATCAGCGCGGCAGTAACCTCAGGAAACATGGCTAATGTTGGGTCGCCGGCTCGA
CTACTTCCCAGCCTTCTCCCACCTCCTTGGTGCTAGTACATCTGAGGTAATTGTTGGGTG
ACGCGACGACTTTGGGGGAACCTCCTAACCGCCCTCCCCAGTACCCTCCCAACGACACAG
CTACTTCCTCCCTCCTCCCTGATCAAATCTCAAACGAACCGAGATTAGCAACAGTTGCAA
GTCCAGCTTCATCTNCACCCACCATCAGGAATGAAGG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_7373#0      CGTAGGCGGCGCATCCACGAGGCGCGCAAGAGCTAAGCTAATAATGCGGAATAGCGATGG 60
consensus_7373#1      ------------------------------------------------------------
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      ATAGCTTCAATAGCTTGGAGCCTTGGATCTCCATATATATGCTCGTAGTAGCGCCATCAC 120
consensus_7373#1      ------------------------------------------------------------
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      GGCCTTTTCTCTCTTCCTTCTCCTGCGGTATATGTGCTGCATATGTGCAAAAGCCTATGA 180
consensus_7373#1      ------------------------------------------------------------
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      CTACTAGCTTGTTTGGAGTTTTTGTACCGATTGATCGAGTAACGTTTGCCCACGCACTCC 240
consensus_7373#1      ------------------------------------------------------------
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      GCGGGTGTTCGATGTATTCAACAATATTTTGAGCATGTGTGGAGGCCGGACGCGCATGTA 300
consensus_7373#1      ------------------------------------------------------------
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      TGTTCGTGGTGGTGTGAGTGTAGCATGCGTAACGTGAATATAAGAGACTGTCCAAACATA 360
consensus_7373#1      ------------------------------------------------------------
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      CTCCCTCCGTCCCAAAAAAAAGAAATCCAATATAGTATTGGATGGGACGTTTTCTAATAC 420
consensus_7373#1      ------------------------------------------------------------
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      AATAAATCTGTACAGGAGTATGTCTAGATTTATTATACTATGAAACGTCTAATTCAATAC 480
consensus_7373#1      ------------------------------------------------------------
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      TAGATTGAGATTATTTTTTGAGACGGAGGGAGTACTTTCGTTCGAGCTATATATATATGG 540
consensus_7373#1      ------------------------------------------------------------
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      CCTATGGCTAATAAGTGTAAAATCGAAAAGTAAATCGAACAAGCAAAACAAAATTATATG 600
consensus_7373#1      ------------------------------------------------------------
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      TACGTACAACTATATATCTATGTTATTAATCAGTTTAAAAGACCGATGCTAAAAAAATAT 660
consensus_7373#1      ------------------------------------------------------------
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      GCTAAATAAATGAACCCTAAATTAACCCTATAACTATGTTTTAAAAAACTAAATTTTGAC 720
consensus_7373#1      ------------------------------------------------------------
consensus_7373#2      ------------------CCACGAGGCGCTCAAGAGCTAAGCTAATAATGCGGAATAGCG 42
                                                                                  

consensus_7373#0      CGTGGCTGACTGTGACCCTGCCAACATACAATTGATAGTCTCTCGGTTGCATAATTCGTA 780
consensus_7373#1      ------------------------------------------------------------
consensus_7373#2      ATGGATAGCTTCAATAGCTTGGAGCCTTGGATCTCCATATATATGCTCGTAGTAGCGCCA 102
                                                                                  

consensus_7373#0      GTTACCATATTCCTTGCATGTGGGTCTCGTGGTCTTGCGTATGTGTGGTTAACTGCATGC 840
consensus_7373#1      ------------------------------------------------------------
consensus_7373#2      TCACGGCCTTTTCTCTCTTCCTTCTCCTGCGGTATATGTGCTGCATATGTGCAAAAGCCT 162
                                                                                  

consensus_7373#0      ATGTGATCAATAAAAATTTGAGTATTTTTACTATGCATTGGGTCCAGGTACCTAGGTACC 900
consensus_7373#1      ------------------------------------------------------------
consensus_7373#2      ATGACTACTAGCTTGTTTGGAGTTTCTGTACCGATTGATCGAGTAACGTTTGCCCACGCA 222
                                                                                  

consensus_7373#0      TGCAATCAGAGCCATTCATCGAGTGTGATATTCAATTGTTGTCAATCTTCGGTACTATCA 960
consensus_7373#1      ------------------------------------------------------------
consensus_7373#2      CTCCGCGGGTGTTCGATGTATTCAACAATATTTTGAGCATGTGTGGAGGCCGGACGCGCA 282
                                                                                  

consensus_7373#0      GGTACAAGAATCCTCTTGGCGGTACCCCCTTCGTTGAACAAGCGGAAGTGCAAAACTGGG 1020
consensus_7373#1      ----------------------------------------------------GGNTTACC 8
consensus_7373#2      TGTACAAGAATCCTCTTGGCGGTACCCCCTTCGTTGAACAAGCGGAAGTGCAAAACTGGG 342
                                                                              *   

consensus_7373#0      TTTAAAATAGTTTTTTTTTTGTGCTGATTCCGCACCTCAGGCTCTTCCCCATCGCCGCGG 1080
consensus_7373#1      TTTAAA-------TTTTTTTGTGCTGATTCCGCACCTCAGGCTCTTCCCCATCGCCGCGG 61
consensus_7373#2      TTTAAAATAGTTTTTTTTTTGTGCTGATTCCGCACCTCAGGCTCTTCCCCATCGCCGCGG 402
                      ******       ***********************************************

consensus_7373#0      TGCAATCAACCTTGCTAGCCGAATCCAAGCTACCGAGACACCTTCAACTCCCTCGCTACA 1140
consensus_7373#1      TGCAATCAACCTTGCTAGCCGAATCCAAGCTACCGAGACACCTTCAACTCCCTCGCTACA 121
consensus_7373#2      TGCAATCAACCTTGCTAGCCGAATCCAAGCTACCGAGACACCTTCAACTCCCTCGCTACA 462
                      ************************************************************

consensus_7373#0      AACTGCAGCCACGACGACGTGCTCATCAGCGCGGCAGTAACCTCAGGAAACATGGCTAAT 1200
consensus_7373#1      AACTGCAGCCACGACGACGTGCTCATCAGCGCGGCAGTAACCTCAGGAAACATGGCTAAT 181
consensus_7373#2      AACTGCAGCCACGACGACGTGCTCATCAGCGCGGCAGTAACCTCAGGAAACATGGCTAAT 522
                      ************************************************************

consensus_7373#0      GTTGGGTCGCCGGCTCGACTACTTCCCAGCCTTCTCCCACCTCCTTGGTGCTAGTACATC 1260
consensus_7373#1      GTTGGGTCGCCGGCTCGACTACTTCCCAGCCTTCTCCCACCTCCTTGGTGCTAGTACATC 241
consensus_7373#2      GTTGGGTCGCCGGCTCGACTACTTCCCAGCCTTCTCCCACCTCCTTGGTGCTAGTACATC 582
                      ************************************************************

consensus_7373#0      TGAGGTAATTGTTGGGTGACGCGACGACTTTGGGGGAACCTCCTAACCGCCCTCCCCAGT 1320
consensus_7373#1      TGAGGTAATTGTTGGGTGACGCGACGACTTTGGGGGAACCTCCTAACCGCCCTCCCCAGT 301
consensus_7373#2      TGAGGTAATTGTTGGGTGACGCGACGACTTTGGGGGAACCTCCTAACCGCCCTCCCCAGT 642
                      ************************************************************

consensus_7373#0      ACCCTCCCAACGACACAGCTACTTCCTCCCTCCTCCCTGATCAAATCTCAAACGAACCGA 1380
consensus_7373#1      ACCCTCCCAACGACACAGCTACTTCCTCCCTCCTCCCTGATCAAATCTCAAACGAACCGA 361
consensus_7373#2      ACCCTCCCAACGACACAGCTACTTCCTCCCTCCTCCCTGATCAAATCTCAAACGAACCGA 702
                      ************************************************************

consensus_7373#0      GATTAGCAACAGTTGCAAGTCCAGCTTCATCTCAACCCACCATCAGGAATGAAGGCGAGG 1440
consensus_7373#1      GATTAGCAACAGTTGCAAGTCCAGCTTCATCTCAACCCACCATCAGGAATGAAGGCGAGG 421
consensus_7373#2      GATTAGCAACAGTTGCAAGTCCAGCTTCATCTNCACCCACCATCAGGAATGAAGG----- 757
                      ********************************  *********************     

consensus_7373#0      TCAAGAGCAGGTACAAGTCCAGCTTCATCTTGCTAAGAATCATAAGAAGCGAATCCTGGA 1500
consensus_7373#1      TCAAGAGCAG---------------------------AATCATAAGAAGCGAATCCTGGA 454
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      GGTGGTGATCAGGGACTTCTGCTATGCCGCAGCAGCAGTCAGGTCGTGGTGCCATCGGTA 1560
consensus_7373#1      GGTGGTGATCAGGGACTTCTGCTATGCCGCAGCAGCAGTCAGGTCGTGGTGCTATCGGTA 514
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      GCCTTCAACCCTAAATACAAACCGTCGCCCGTGAAGGATAGTACGAGACTAGGAGGTCGC 1620
consensus_7373#1      GCCTTCAACCCTAAATACAAACCGTCGCCCGTGAAGGATAGTACGAGACTAGGAGGTCGC 574
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      GAGGGTCTTGTTTCCTTCTTTTTCCTATTGTGTCCTTGCTTATTCAACGGTTAGATTTTG 1680
consensus_7373#1      GAGGGTCTTGTTTCCTTCTTTTTCCTATTGTGTCCTTGCTTATTCAACGGATAGATTTTG 634
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      TTTGGTACCTTGCAGTACCAGTATTTGGAGGTACCATTTAATGGACCATAAAAACACTCC 1740
consensus_7373#1      TTTGGTACCTTGCAGTACCAGTATTTGGAGGTACCATTTAATGGACCATAAAAACACTCC 694
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      AAAAAATTACATGCATCTTGTGTGTTACTAGGGAGAGGAGTTCCACTCTTCTCTCTCACC 1800
consensus_7373#1      AAAAAATTACATGCATCTTGTGTGTTACTAGGGAGAGGAGTTCCACTCTTCTCTCTCACC 754
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      TTCTCTCCCTAACTCCCGAAGACTTGGATAGAGTGGGGCTTTGTGTTGGTTGTAAGGGTC 1860
consensus_7373#1      TTCTCTCCCTAACTCCCGAAGACTTGGATAGAGTGGGGCTTTGTGTTGGTTGTAAGGGTC 814
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      GGGTTTTGGCTGATCTCGGCTATATTCTGTTGTTGGCCTAGCGGCGGTCGGTCACGCTTA 1920
consensus_7373#1      GGGTTTTGGCTGATCTCGGCTATATTCTGTTGTTGGCCTAGCGGCGGTCGGTCACGCTTA 874
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      GCGGCGGCTGGTCTGGTGATAGCCTTCTCCTGGATGTGTGTTGGTGCTGTCGGTGTATGT 1980
consensus_7373#1      GCGGCGGCTGGTCTGGTGATAGCCTTCTCCTGGATGTGTGTTGGTGCTGTCGGTGTATGT 934
consensus_7373#2      ------------------------------------------------------------
                                                                                  

consensus_7373#0      GTGGTGGTATACTTTTTCATTTTCCTGGTTACGACC 2016
consensus_7373#1      GTGGTGGTATNCTTTTTCATTTTCCTCTTTAAGGC- 969
consensus_7373#2      ------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)