cluster # 7538

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 7538 cluster # 7538 Sequences # 4 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_7538#0 length = 2190 sequences # 4
consensusID : consensus_7538#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2190
fasta sequence
                              [CTCATTGCTCCTGGGTAGAGAGAGAGAGAGAGAGAGAGAGAAAGCAGAGGCTGCTGCAACTGTGAAGCTTCACCTGCAGAGGAGGAGGGAGAAGAACAATGGCGGAGGATGGAAGAGGAGAGGAGAAGGCCGTGGACGTGGTGGCGGTGAAGAAGCCGAAGCAGGGAGGCTTCAGGACCATGCCGTTCATCCTAGCGAACGACTTCTGCGACCGGCTCGCGAATGTGGGGTTCAGCTCCAACCTGATCACGTACCTGACCCTGCAGCTGCACCTCCCCCTCGTCGACGCCTCCAACACGCTGACCAACTTCCACGGCACCGCCAACCTCACCCCGCTCGTCGGCGGCCTCATCGCCGACTCCTTCGCCGGCAGGTTCTGGACCATCACGTTCGGCTCCGTCATCTACCAGCTCGGCATGGTCTTCCTCACCCTCTCCGCCGCGCTCCCCTCGCTCCGCCCGCCGCCCTGCGCCAAGCACGCCGCCGACTGCCAGCGCGCCTCGTCCTCCCAGATCGCCGTGCTCTACGCCTCGCTGCTCTTCACCTCCATCGGCACCGGCGGCACGCGCCCCTGCATCATGGCGTTCGGCGCCGACCAGCTCGAGCTCGACGCTGGCGCGCGCGGGCGCCGCGGGCGCAAGGGGCCCAAGTGGAGCTTCTTCAACCTCTACTTCTTCGGCATCGAGCTCGCCAAGCTCACCGCCGTCACCGTCATCGTGTACATCCAGGAGAACGTCGGGTGGGGGTGGGGCCTCGGCGTGCCCACCATCGCCATGTTCGCCGCCGTGGTCGCCTTCGTGTCCGGCTACTCGATGTACGTCAAGATGCCTCCCGCCGGCAGCCCCCTGGTCCGGCTGGCGCAGGTCGCAGCCGCCGCCTTCAAGAAGAGGAAAGCCGTCATGCCGGAGCCAAGCCGCCTCTACGAGGACAAGGTGCTCGACGCCGGCATCTCCACCACCGGCCGTCTTCTCCACACCGATCAGCTAAAGTTCTTTGACAAGGCGGCCATTATCACGGACGGCGACGTGCTGCCGTCCGGCGAGCCGAAGCTGTGGCGGCTGTCGACGGTGCACCGCGTCGAGGAGCTCAAGTCGATCCTCCGCATGCTGCCCATCTGGGCGGCGGGCATCCTGCTGGTGACCTCGGCGTCGCACAACAGCAGCTTCGCGATCCAGCAGGCGCGCACCATGGACCGCGACATCACGCCGCACTTCAAGATCCCGCCGGCCTCCATGCTCATCTTCACCAACCTCGCCATGCTGCTCACCCTCGCCTTCTACGACCGCGTCCTCGTCCGCGTGCTCCGCCGCTTCACGGGCCACCCAAACGGCATCACCCACCTCCAGCGCGCCGGCGTGGGCATGACCATTGCCATGCTCGCCAACGCGGTGGCCGCGGTCGTGGAGAGTCGCCGCAAGTCCGTGGCCGCGGCGAGCGGCATGCTCGACGCGCCCAAGGGTAGCTCGCTGCCCATCAGCGTCTTCTGGCTGGTGCCGCAGTACGCCATCCACGGCGTCGCCGACGCCTTCATGGACGTCGGCCGCATGGAGTTCCTCTACGACCAGGCGCCGGAGAGCATGCGGAGCACCGCGGCGGCGCTCTACTGGCTCACCATGTCGATCGGCAGCTACCTCGGCACGCTGCTCGTCACCATCATCCACGCCAAGACGCAGCGGAGCGGGCAGTGGCTGCAGGACAACCTCAACCGAGCCAAGCTGGACAGCTACTACTGGCTCGTCTTCGGCTTGCAGGGGCTCAACCTCATCTACTACTTCGTCTGCGTCAGGTACTACACCTTCAAGCCATTGGAGACGGTGAAACCTGAGGAGGAGCTCGAGCTCTACCGTGGAAATGGCAACGAGGGCGATGGCAAGAAAGGAGGAACCTTGAAGTAGAATGTGCATTTCAATCCCCTTGCCGGATTGGAACAGAATAATATGTTCACTTTTACTACATAGATGGTTTATGCTTTGATCTCACCATATAAATTGCCGAGATTTTATGAACTCTCTGGCAAATAGAAGAACGTATTTTTGTGTGTCATATATTCAAGAACAAGAAGTGTATATGCCCATGTCCTCAAAGGATTTTCTCTGTTTGATCAGTGTTTACATAAACAAGTAAAATATCAAGGCGAGATGTATCAATTTATCCCGGAAAAAAATAATTTCTGATCGTATGCCAGAAAAA]

[+] EMBL AK070558             [CTCATTGCTCCTGGGTAGAGAGAGAGAGAGAGAGAGAGAGAAAGCAGAGGCTGCTGCAACTGTGAAGCTTCACCTGCAGAGGAGGAGGGAGAAGAACAATGGCGGAGGATGGAAGAGGAGAGGAGAAGGCCGTGGACGTGGTGGCGGTGAAGAAGCCGAAGCAGGGAGGCTTCAGGACCATGCCGTTCATCCTAGCGAACGACTTCTGCGACCGGCTCGCGAATGTGGGGTTCAGCTCCAACCTGATCACGTACCTGACCCTGCAGCTGCACCTCCCCCTCGTCGACGCCTCCAACACGCTGACCAACTTCCACGGCACCGCCAACCTCACCCCGCTCGTCGGCGGCCTCATCGCCGACTCCTTCGCCGGCAGGTTCTGGACCATCACGTTCGGCTCCGTCATCTACCAGCTCGGCATGGTCTTCCTCACCCTCTCCGCCGCGCTCCCCTCGCTCCGCCCGCCGCCCTGCGCCAAGCACGCCGCCGACTGCCAGCGCGCCTCGTCCTCCCAGATCGCCGTGCTCTACGCCTCGCTGCTCTTCACCTCCATCGGCACCGGCGGCACGCGCCCCTGCATCATGGCGTTCGGCGCCGACCAGCTCGAGCTCGACGCTGGCGCGCGCGGGCGCCGCGGGCGCAAGGGGCCCAAGTGGAGCTTCTTCAACCTCTACTTCTTCGGCATCGAGCTCGCCAAGCTCACCGCCGTCACCGTCATCGTGTACATCCAGGAGAACGTCGGGTGGGGGTGGGGCCTCGGCGTGCCCACCATCGCCATGTTCGCCGCCGTGGTCGCCTTCGTGTCCGGCTACTCGATGTACGTCAAGATGCCTCCCGCCGGCAGCCCCCTGGTCCGGCTGGCGCAGGTCGCAGCCGCCGCCTTCAAGAAGAGGAAAGCCGTCATGCCGGAGCCAAGCCGCCTCTACGAGGACAAGGTGCTCGACGCCGGCATCTCCACCACCGGCCGTCTTCTCCACACCGATCAGCTAAAGTTCTTTGACAAGGCGGCCATTATCACGGACGGCGACGTGCTGCCGTCCGGCGAGCCGAAGCTGTGGCGGCTGTCGACGGTGCACCGCGTCGAGGAGCTCAAGTCGATCCTCCGCATGCTGCCCATCTGGGCGGCGGGCATCCTGCTGGTGACCTCGGCGTCGCACAACAGCAGCTTCGCGATCCAGCAGGCGCGCACCATGGACCGCGACATCACGCCGCACTTCAAGATCCCGCCGGCCTCCATGCTCATCTTCACCAACCTCGCCATGCTGCTCACCCTCGCCTTCTACGACCGCGTCCTCGTCCGCGTGCTCCGCCGCTTCACGGGCCACCCAAACGGCATCACCCACCTCCAGCGCGCCGGCGTGGGCATGACCATTGCCATGCTCGCCAACGCGGTGGCCGCGGTCGTGGAGAGTCGCCGCAAGTCCGTGGCCGCGGCGAGCGGCATGCTCGACGCGCCCAAGGGTAGCTCGCTGCCCATCAGCGTCTTCTGGCTGGTGCCGCAGTACGCCATCCACGGCGTCGCCGACGCCTTCATGGACGTCGGCCGCATGGAGTTCCTCTACGACCAGGCGCCGGAGAGCATGCGGAGCACCGCGGCGGCGCTCTACTGGCTCACCATGTCGATCGGCAGCTACCTCGGCACGCTGCTCGTCACCATCATCCACGCCAAGACGCAGCGGAGCGGGCAGTGGCTGCAGGACAACCTCAACCGAGCCAAGCTGGACAGCTACTACTGGCTCGTCTTCGGCTTGCAGGGGCTCAACCTCATCTACTACTTCGTCTGCGTCAGGTACTACACCTTCAAGCCATTGGAGACGGTGAAACCTGAGGAGGAGCTCGAGCTCTACCGTGGAAATGGCAACGAGGGCGATGGCAAGAAAGGAGGAACCTTGAAGTAGAATGTGCATTTCAATCCCCTTGCCGGATTGGAACAGAATAATATGTTCACTTTTACTACATAGATGGTTTATGCTTTGATCTCACCATATAAATTGCCGAGATTTTATGAACTCTCTGGCAAATAGAAGAACGTATTTTTGTGTGTCATATATTCAAGAACAAGAAGTGTATATGCCCATGTCCTCAAAGGATTTTCTCTGTTTGATCAGTGTTTACATAAACAAGTAAAATATCAAGGCGAGATGTATCAATTTATCCCGGAAAAAAATAATTTCTGATCGTATGCCAGAAAAA]
[+] EMBL AK119621             [ TCATTGCTCCTGGGTAGAGAGAGAGAGAGAGAGAGAGAGAAAGCAGAGGCTGCTGCAACTGTGAAGCTTCACCTGCAGAGGAGGAGGGAGAAGAACAATGGCGGAGGATGGAAGAGGAGAGGAGAAGGCCGTGGACGTGGTGGCGGTGAAGAAGCCGAAGCAGGGAGGCTTCAGGACCATGCCGTTCATCCTAGCGAACGACTTCTGCGACCGGCTCGCGAATGTGGGGTTCAGCTCCAACCTGATCACGTACCTGACCCTGCAGCTGCACCTCCCCCTCGTCGACGCCTCCAACACGCTGACCAACTTCCACGGCACCGCCAACCTCACCCCGCTCGTCGGCGGCCTCATCGCCGACTCCTTCGCCGGCAGGTTCTGGACCATCACGTTCGGCTCCGTCATCTACCAGCTCGGCATGGTCTTCCTCACCCTCTCCGCCGCGCTCCCCTCGCTCCGCCCGCCGCCCTGCGCCAAGCACGCCGCCGACTGCCAGCGCGCCTCGTCCTCCCAGATCGCCGTGCTCTACGCCTCGCTGCTCTTCACCTCCATCGGCACCGGCGGCACGCGCCCCTGCATCATGGCGTTCGGCGCCGACCAGCTCGAGCTCGACGCTGGCGCGCGCGGACGCCGCGGGCGCAAGGGGCCCAAGTGGAGCTTCTTCAACCTCTACTTCTTCGGCATCGAGCTCGCCAAGCTCACCGCCGTCACCGTCATCGTGTACATCCAGGAGAACGTCGGGTGGGGGTGGGGCCTCGGCGTGCCCACCATCGCCATGTTCGCCGCCGTGGTCGCCTTCGTGTCCGGCTACTCGATGTACGTCAAGATGCCTCCCGCCGGCAGCCCCCTGGTCCGGCTGGCGCAGGTCGCAGCCGCCGCCTTCAAGAAGAGGAAAGCCGTCATGCCGGAGCCAAGCCGCCTCTACGAGGACAAGGTGCTCGACGCCGGCATCTCCACCACCGGCCGTCTTCTCCACACCGATCAGCTAAAGTTCTTTGACAAGGCGGCCATTATCACGGACGGCGACGTGCTGCCGTCCGGCGAGCCGAAGCTGTGGCGGCTGTCGACGGTGCACCGCGTCGAGGAGCTCAAGTCGATCCTCCGCATGCTGCCCATCTGGGCGGCGGGCATCCTGCTGGTGACCTCGGCGTCGCACAACAGCAGCTTCGCGATCCAGCAGGCGCGCACCATGGACCGCGACATCACGCCGCACTTCAAGATCCCGCCGGCCTCCATGCTCATCTTCACCAACCTCGCCATGCTGCTCACCCTCGCCTTCTACGACCGCGTCCTCGTCCGCGTGCTCCGCCGCTTCACGGGCCACCCAAACGGCATCACCCACCTCCAGCGCGCCGGCGTGGGCATGACCATTGCCATGCTCGCCAACGCGGTGGCCGCGGTCGTGGAGAGTCGCCGCAAGTCCGTGGCCGCGGCGAGCGGCATGCTCGACGCGCCCAAGGGTAGCTCGCTGCCCATCAGCGTCTTCTGGCTGGTGCCGCAGTACGCCATCCACGGCGTCGCCGACGCCTTCATGGACGTCGGCCGCATGGAGTTCCTCTACGACCAGGCGCCGGAGAGCATGCGGAGCACCGCGGCGGCGCTCTACTGGCTCACCATGTCGATCGGCAGCTACCTCGGCACGCTGCTCGTCACCATCATCCACGCCAAGACGCAGCGGAGCGGGCAGTGGCTGCAGGACAACCTCAACCGAGCCAAGCTGGACAGCTACTACTGGCTCGTCTTCGGCTTGCAGGGGCTCAACCTCATCTACTACTTCGTCTGCGTCAGGTACTACACCTTCAAGCCATTGGAGACGGTGAAACCTGAGGAGGAGCTCGAGCTCTACCGTGGAAATGGCAACGAGGGCGATGGCAAGAAAGGAGGAACCTTGAAGTAGAATGTGCATTTCAATCCCCTTGCCGGATTGGAACAGAATAATATGTTCACTTTTACTACATAGATGGTTTATGCTTTGATCTCACCATATAAATTGCCGAGATTTTATGAACTCTCTGGCAAATAGAAGAACGTATTTTTGTGTGTCATATATTCAAGAACAAGAAGTGTATA                                                                                                                          ]
[+] EMBL CF291674             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         gagtagaaaCATCTACTACTTCGTCTGCGTCAGGTACTACACCTTCAAGCCATTGGAGACGGTGAAACCTGAGGAGGAGCTCGAGCTCTACCGTGGAAATGGCAACGAGGGCGATGGCAAGAAAGGAGGAACCTTGAAGTAGAATGTGCATTTCAATCCCCTTGCCGGATTGGAACAGAATAATATGTTCACTTTTACTACATAGATGGTTTATGCTTTGATCTCACCATATAAATTGCCGAGATTTTATGAACTCTCTGGCAAATAGAAGAACGTATTTTTGTGTGTCATATATTCAAaa                                                                                                                                        ]
[-] EMBL CF291675             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CTTCGTCTGCGTCAGGTACTACACCTTCAAGCCATTGGAGACGGTGAAACCTGAGGAGGAGCTCGAGCTCTACCGTGGAAATGGCAACGAGGGCGATGGCAAGAAAGGAGGAACCTTGAAGTAGAATGTGCATTTCAATCCCCTTGCCGGATTGGAACAGAATAATATGTTCACTTTTACTACATAGATGGTTTATGCTTTGATCTCACCATATAAATTGCCGAGATTTTATGAACTCTCTGGCAAATAGAAGAACGTATTTTTGTGTGTCATATATTCAAAAA                                                                                                                                       ]




>consensus_7538#0
CTCATTGCTCCTGGGTAGAGAGAGAGAGAGAGAGAGAGAGAAAGCAGAGGCTGCTGCAAC
TGTGAAGCTTCACCTGCAGAGGAGGAGGGAGAAGAACAATGGCGGAGGATGGAAGAGGAG
AGGAGAAGGCCGTGGACGTGGTGGCGGTGAAGAAGCCGAAGCAGGGAGGCTTCAGGACCA
TGCCGTTCATCCTAGCGAACGACTTCTGCGACCGGCTCGCGAATGTGGGGTTCAGCTCCA
ACCTGATCACGTACCTGACCCTGCAGCTGCACCTCCCCCTCGTCGACGCCTCCAACACGC
TGACCAACTTCCACGGCACCGCCAACCTCACCCCGCTCGTCGGCGGCCTCATCGCCGACT
CCTTCGCCGGCAGGTTCTGGACCATCACGTTCGGCTCCGTCATCTACCAGCTCGGCATGG
TCTTCCTCACCCTCTCCGCCGCGCTCCCCTCGCTCCGCCCGCCGCCCTGCGCCAAGCACG
CCGCCGACTGCCAGCGCGCCTCGTCCTCCCAGATCGCCGTGCTCTACGCCTCGCTGCTCT
TCACCTCCATCGGCACCGGCGGCACGCGCCCCTGCATCATGGCGTTCGGCGCCGACCAGC
TCGAGCTCGACGCTGGCGCGCGCGGGCGCCGCGGGCGCAAGGGGCCCAAGTGGAGCTTCT
TCAACCTCTACTTCTTCGGCATCGAGCTCGCCAAGCTCACCGCCGTCACCGTCATCGTGT
ACATCCAGGAGAACGTCGGGTGGGGGTGGGGCCTCGGCGTGCCCACCATCGCCATGTTCG
CCGCCGTGGTCGCCTTCGTGTCCGGCTACTCGATGTACGTCAAGATGCCTCCCGCCGGCA
GCCCCCTGGTCCGGCTGGCGCAGGTCGCAGCCGCCGCCTTCAAGAAGAGGAAAGCCGTCA
TGCCGGAGCCAAGCCGCCTCTACGAGGACAAGGTGCTCGACGCCGGCATCTCCACCACCG
GCCGTCTTCTCCACACCGATCAGCTAAAGTTCTTTGACAAGGCGGCCATTATCACGGACG
GCGACGTGCTGCCGTCCGGCGAGCCGAAGCTGTGGCGGCTGTCGACGGTGCACCGCGTCG
AGGAGCTCAAGTCGATCCTCCGCATGCTGCCCATCTGGGCGGCGGGCATCCTGCTGGTGA
CCTCGGCGTCGCACAACAGCAGCTTCGCGATCCAGCAGGCGCGCACCATGGACCGCGACA
TCACGCCGCACTTCAAGATCCCGCCGGCCTCCATGCTCATCTTCACCAACCTCGCCATGC
TGCTCACCCTCGCCTTCTACGACCGCGTCCTCGTCCGCGTGCTCCGCCGCTTCACGGGCC
ACCCAAACGGCATCACCCACCTCCAGCGCGCCGGCGTGGGCATGACCATTGCCATGCTCG
CCAACGCGGTGGCCGCGGTCGTGGAGAGTCGCCGCAAGTCCGTGGCCGCGGCGAGCGGCA
TGCTCGACGCGCCCAAGGGTAGCTCGCTGCCCATCAGCGTCTTCTGGCTGGTGCCGCAGT
ACGCCATCCACGGCGTCGCCGACGCCTTCATGGACGTCGGCCGCATGGAGTTCCTCTACG
ACCAGGCGCCGGAGAGCATGCGGAGCACCGCGGCGGCGCTCTACTGGCTCACCATGTCGA
TCGGCAGCTACCTCGGCACGCTGCTCGTCACCATCATCCACGCCAAGACGCAGCGGAGCG
GGCAGTGGCTGCAGGACAACCTCAACCGAGCCAAGCTGGACAGCTACTACTGGCTCGTCT
TCGGCTTGCAGGGGCTCAACCTCATCTACTACTTCGTCTGCGTCAGGTACTACACCTTCA
AGCCATTGGAGACGGTGAAACCTGAGGAGGAGCTCGAGCTCTACCGTGGAAATGGCAACG
AGGGCGATGGCAAGAAAGGAGGAACCTTGAAGTAGAATGTGCATTTCAATCCCCTTGCCG
GATTGGAACAGAATAATATGTTCACTTTTACTACATAGATGGTTTATGCTTTGATCTCAC
CATATAAATTGCCGAGATTTTATGAACTCTCTGGCAAATAGAAGAACGTATTTTTGTGTG
TCATATATTCAAGAACAAGAAGTGTATATGCCCATGTCCTCAAAGGATTTTCTCTGTTTG
ATCAGTGTTTACATAAACAAGTAAAATATCAAGGCGAGATGTATCAATTTATCCCGGAAA
AAAATAATTTCTGATCGTATGCCAGAAAAA
clustalw multiple alignements is not computed in this case