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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7762#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2275 fasta sequence
[AAGGGAAAAAGAATGCGCCACCGTGGCCCACCGCCGTGACCTCGCCGCCGGCGAGGCCTCCCCTGCCCATGGACTCCGCCGGCGTCATCCTCTCCATCCTCAGCAAGCTGCAGTCTCTCGGCTTCTGCGCCCATCTCCGGATCGGCGACGCCGCGGCCTCCGGCCCCCCCTCGGACCTGTTCGACACCGTCCTCGCCGCGTTCCTCCGCGAGGTCTACCCGGGCGGCCGCGAGGTGCGCCCTCTCCCGGCGAAGCTCGGCGACGGGAGCCGCGTCGACCTGCTCCGCCTCTTCTCCGCCATCCGCGCCGCCGGCGGCTACGCCGCGACGTCGTCGTCCCCCGCCGTCTGGGCCTCCGCCGCCGAGTCCGTTTGCCTCGACGCCACCCTCGCCGCGCCCGTCAAGCTAATCTACCACAAGTACCTCGCCGCCCTGGACCGCTGGATCCAGAGGCTCGTGGAGGCGCATGGACCCTTCCTGGATGGCAACGACGGGAGGAAGAAGCCAGAGCCATTCTTCGATTCCAATGGAAGGGAGAATGAAGAACCACTCTTGGAATGCAATGGGGGAGATCTGCAGCATCCAATCTTGAAGAGGAAGAGGGAGGACATGGTTGGGATGTTGGATTGGGTCAGGGAGCTTGCCGAGAATGGCGGTGAGGCAGGCACCATGGCTGCCGGCTCGGCGAATGGGTACTACTCGTTGGCGTTGGCAGCGAGGAAGGCGGTGTTCGCGAAGAGGGCTCGCCGCTCGAGCATGACGATGAATGGTGCACTCATGCAGGAAATATTTCCAATGGATTGCAAGTGCTGCATGAGTTCCAGCACTACTGGAATTGACACACAAGAAAAATGCAGTAAAAAGATTCAACTTGTCATTCCACAGGCTGGTTCAGATATTAATGAATTGATAAATGTTGTAGAAAACATAAATGTGCCTTCAATTGGAATGGAGCAAGAGAACAACATTATTGGACAAGCGAAATATGAGAGTAGGAAACATCATAACTCTGACAACTGGCTTTTTACGAGTCAGCAGAGGAACAAAATACCAGTGGGCTCTGAGTTCCAAGCACAAGTACCACAATGGACTGGTGAGTTGCCTGTAAGCTATGATAATGCAGAAACCAGGAAATGGTTGGGCACAAAGGTCTGGCCTCTGGAAAATGGTAACAGGAAATTATCATATTTTTGTAACCCTGTTGGAAAAGGTAGAGAAGGTGTTTGTGGCTGCAACCTTCCAGGATCTGTAGAATGTGTTAGGTTTCATGTTGCAGAAAGGAGACTTCAGCTGCGACGTGAACTTGATTCAGCTTTCTATGCATGGGGATTTGATCGTATGGGAGAGGAAATCGCACTTTCCTGGACAGATAAAGAGGAAGCAAATTTCAAGGCTTGCGTGCAGCTTAATGCCCCATCTTCAGGAAGGAATTTCTGGAAGCGTCTCCATATGCTTTTTCAGTCAAAGGGTAGGAAAGAACTTGTGAGCTACTATTTTAATTGTTTTCTACTTAGACGGAGGTGTTATCAGAATAGGATGACTCCAAATAACATAGATAGTGATGATGAGGATGAGACAGAATTTGGATTCTTGGGTAACCGCCTTGGTCATAATGCAACTAAGTATGACAGTTCCAAGTATACCCTTTGCATCGAAAGTACACACTGCATGGATCTCAACCAATAGTTTCTGATCAGCATTAATGAAGATGATTGAAGTTTAGTAGTTCACTTCTCTTGCTGTTGAGTGTCTTGGATAAGGTTTAAATAGGCGGATTGGAGTTTTGGTGTTTAACTTCTCTCATTGCCAATGGTTTCTGCGCGATATAAAGAAGCTTACTGAAATTTGGCAATTAATTTCTTCCATTGCCAATGGTTTCTGATCAGATATAGAGAAGCCGATTGAGTTTGATAATACACTTCTCTCTTTGCGAAAAGTTTCTGATCAGATGAATGCTTTCATCCACTGATTTCTTATGCAGACGGAAATGTAAATGCTTAAGTGCAAGCCAATCATTTGAACAAGTTGCTTACCGCTGCGGAAGATTTGACCGAAGCTTGCGATTGAAGTTGGGAGGCAAGTTTTGATAGAGTGTAGTGGCACTGATATGTGAACAATCACATGGATTCATTATATCCACAAGGTGAAAAAGAGAACAGCGGTAGCATTTTTACCGATGCTTCCTTGAAGGTATCACATGTACCATTTTCTAGTTTTATCCTTTGTGTAAAGTAGTTTTGCATACATTGCACAGTAGTATGATTAACTGTTCCTTG]
[+] EMBL AK064159 [AAGGGAAAAAGAATGCGCCACCGTGGCCCACCGCCGTGACCTCGCCGCCGGCGAGGCCTCCCCTGCCCATGGACTCCGCCGGCGTCATCCTCTCCATCCTCAGCAAGCTGCAGTCTCTCGGCTTCTGCGCCCATCTCCGGATCGGCGACGCCGCGGCCTCCGGCCCCCCCTCGGACCTGTTCGACACCGTCCTCGCCGCGTTCCTCCGCGAGGTCTACCCGGGCGGCCGCGAGGTGCGCCCTCTCCCGGCGAAGCTCGGCGACGGGAGCCGCGTCGACCTGCTCCGCCTCTTCTCCGCCATCCGCGCCGCCGGCGGCTACGCCGCGACGTCGTCGTCCCCCGCCGTCTGGGCCTCCGCCGCCGAGTCCGTTTGCCTCGACGCCACCCTCGCCGCGCCCGTCAAGCTAATCTACCACAAGTACCTCGCCGCCCTGGACCGCTGGATCCAGAGGCTCGTGGAGGCGCATGGACCCTTCCTGGATGGCAACGACGGGAGGAAGAAGCCAGAGCCATTCTTCGATTCCAATGGAAGGGAGAATGAAGAACCACTCTTGGAATGCAATGGGGGAGATCTGCAGCATCCAATCTTGAAGAGGAAGAGGGAGGACATGGTTGGGATGTTGGATTGGGTCAGGGAGCTTGCCGAGAATGGCGGTGAGGCAGGCACCATGGCTGCCGGCTCGGCGAATGGGTACTACTCGTTGGCGTTGGCAGCGAGGAAGGCGGTGTTCGCGAAGAGGGCTCGCCGCTCGAGCATGACGATGAATGGTGCACTCATGCAGGAAATATTTCCAATGGATTGCAAGTGCTGCATGAGTTCCAGCACTACTGGAATTGACACACAAGAAAAATGCAGTAAAAAGATTCAACTTGTCATTCCACAGGCTGGTTCAGATATTAATGAATTGATAAATGTTGTAGAAAACATAAATGTGCCTTCAATTGGAATGGAGCAAGAGAACAACATTATTGGACAAGCGAAATATGAGAGTAGGAAACATCATAACTCTGACAACTGGCTTTTTACGAGTCAGCAGAGGAACAAAATACCAGTGGGCTCTGAGTTCCAAGCACAAGTACCACAATGGACTGGTGAGTTGCCTGTAAGCTATGATAATGCAGAAACCAGGAAATGGTTGGGCACAAAGGTCTGGCCTCTGGAAAATGGTAACAGGAAATTATCATATTTTTGTAACCCTGTTGGAAAAGGTAGAGAAGGTGTTTGTGGCTGCAACCTTCCAGGATCTGTAGAATGTGTTAGGTTTCATGTTGCAGAAAGGAGACTTCAGCTGCGACGTGAACTTGATTCAGCTTTCTATGCATGGGGATTTGATCGTATGGGAGAGGAAATCGCACTTTCCTGGACAGATAAAGAGGAAGCAAATTTCAAGGCTTGCGTGCAGCTTAATGCCCCATCTTCAGGAAGGAATTTCTGGAAGCGTCTCCATATGCTTTTTCAGTCAAAGGGTAGGAAAGAACTTGTGAGCTACTATTTTAATTGTTTTCTACTTAGACGGAGGTGTTATCAGAATAGGATGACTCCAAATAACATAGATAGTGATGATGAGGATGAGACAGAATTTGGATTCTTGGGTAACCGCCTTGGTCATAATGCAACTAAGTATGAC ]
[+] EMBL AK064765 [ GCGCCACCGTGGCCCACCGCCGTGACCTCGCCGCCGGCGAGGCCTCCCCTGCCCATGGACTCCGCCGGCGTCATCCTCTCCATCCTCAGCAAGCTGCAGTCTCTCGGCTTCTGCGCCCATCTCCGGATCGGCGACGCCGCGGCCTCCGGCCCCCCCTCGGACCTGTTCGACACCGTCCTCGCCGCGTTCCTCCGCGAGGTCTACCCGGGCGGCCGCGAGGTGCGCCCTCTCCCGGCGAAGCTCGGCGACGGGAGCCGCGTCGACCTGCTCCGCCTCTTCTCCGCCATCCGCGCCGCCGGCGGCTACGCCGCGACGTCGTCGTCCCCCGCCGTCTGGGCCTCCGCCGCCGAGTCCGTTTGCCTCGACGCCACCCTCGCCGCGCCCGTCAAGCTAATCTACCACAAGTACCTCGCCGCCCTGGACCGCTGGATCCAGAGGCTCGTGGAGGCGCATGGACCCTTCCTGGATGGCAACGACGGGAGGAAGAAGCCAGAGCCATTCTTCGATTCCAATGGAAGGGAGAATGAAGAACCACTCTTGGAATGCAATGGGGGAGATCTGCAGCATCCAATCTTGAAGAGGAAGAGGGAGGACATGGTTGGGATGTTGGATTGGGTCAGGGAGCTTGCCGAGAATGGCGGTGAGGCAGGCACCATGGCTGCCGGCTCGGCGAATGGGTACTACTCGTTGGCGTTGGCAGCGAGGAAGGCGGTGTTCGCGAAGAGGGCTCGCCGCTCGAGCATGACGATGAATGGTGCACTCATGCAGGAAATATTTCCAATGGATTGCAAGTGCTGCATGAGTTCCAGCACTACTGGAATTGACACACAAGAAAAATGCAGTAAAAAGATTCAACTTGTCATTCCACAGGCTGGTTCAGATATTAATGAATTGATAAATGTTGTAGAAAACATAAATGTGCCTTCAATTGGAATGGAGCAAGAGAACAACATTATTGGACAAGCGAAATATGAGAGTAGGAAACATCATAACTCTGACAACTGGCTTTTTACGAGTCAGCAGAGGAACAAAATACCAGTGGGCTCTGAGTTCCAAGCACAAGTACCACAATGGACTGGTGAGTTGCCTGTAAGCTATGATAATGCAGAAACCAGGAAATGGTTGGGCACAAAGGTCTGGCCTCTGGAAAATGGTAACAGGAAATTATCATATTTTTGTAACCCTGTTGGAAAAGGTAGAGAAGGTGTTTGTGGCTGCAACCTTCCAGGATCTGTAGAATGTGTTAGGTTTCATGTTGCAGAAAGGAGACTTCAGCTGCGACGTGAACTTGATTCAGCTTTCTATGCATGGGGATTTGATCGTATGGGAGAGGAAATCGCACTTTCCTGGACAGATAAAGAGGAAGCAAATTTCAAGGCTTGCGTGCAGCTTAATGCCCCATCTTCAGGAAGGAATTTCTGGAAGCGTCTCCATATGCTTTTTCAGTCAAAGGGTAGGAAAGAACTTGTGAGCTACTATTTTAATTGTTTTCTACTTAGACGGAGGTGTTATCAGAATAGGATGACTCCAAATAACATAGATAGTGATGATGAGGATGAGACAGAATTTGGATTCTTGGGTAACCGCCTTGGTCATAATGCAACTAAGTATGACAGTTCCAAGTATACCCTTTGCATCGAAAGTACACACTGCATGGATCTCAACCAATAGTTTCTGATCAGCATTAATGAAGATGATTGAAGTTTAGTAGTTCACTTCTCTTGCTGTTGAGTGTCTTGGATAAGGTTTAAATAGGCGGAGTGGAGTTTTGGTGTTTAACTTCTCTCATTGCCAATGGTTTCTGCGCGATATAAAGAAGCTTACTGAAATTTGGCAATTAATTTCTTCCATTGCCAATGGTTTCTGATCAGATATAGAGAAGCCGATTGAGTTTGATAATACACTTCTCTCTTTGCGAAAAGTTTCTGATCAGATGAATGCTTTCATCCACTGATTTCTTATGCAGACGGAAATGTAAATGCTTAAGTGCAAGCCAATCATTTGAACAAGTTGCTTACCGCTGCGGAAGATTTGACCGAAGCTTGCGATTGAAGTTGGGAGGCAAGTTTTGATAGAGTGTAGTGGCACTGATATGTGAACAATCACATGGATTCATTATATCCACAAGGTGAAAAAGAGAACAGCGGTAGCATTTTTACCGATGCTTCCTTGAAGGTATCACATGTACCATTTTCTAGTTTTATCCTTTGTGTAAAGTAGTTTTGCATACATTGCACAGTAGTATGATTAACTGT ]
[+] EMBL CB661347 [ CTCGCCGCCCTGGACCGCTGGATCCAGAGGCTCGTGGAGGCGCATGGACCCTTCCTGGATGGCAACGACGGGAGGAAGAAGCCAGAGCCATTCTTCGATTCCAATGGAAGGGAGAATGAAGAACCACTCTTGGAATGCAATGGGGGAGATCTGCAGCATCCAATCTTGAAGAGGAAGAGGGAGGACATGGTTGGGATGTTGGATTGGGTCAGGGAGCTTGCCGAGAATGGCGGTGAGGCAGGCACCATGGCTGCCGGCTCGGCGAATGGGTACTACTCGTTGGCGTTGGCAGCGAGGAAGGCGGTGTTCGCGAAGAGGGCTCGCCGCTCGAGCATGACGATGAATGGTGCACTCATGCAGGAAATATTTCCAATGGATTGCAAGTGCTGCATGAGTTCCAGCACTACTGGAATTGACACACAAGAAAAATGCAGTAAAAAGATTCAACTTGTCATTCC CAGGCTGGTTCAGATATTAATGAATTGATAAATGTTGTAGAAAACATAAATGTGCCTTCAATTGGAATGGAGCAAGAGAACAACATTATTGGACAAGCGAAATATGAGAGTAGGAAACATCATAACTCTGACAACTGGCTTTTTACGAGTCAGCAGAGGAACAAAATACCAGTGGGCTCTGAGTTCCAAGCACAAGTACCACAATGGACTGGTGAGTTGCCTGTAAGCTATGATAATGCAGAAACCAGGAAATGGTTGGGCACAAAGGTCTGGCCTCTGGAAAATGGTAACAGGAAATTATCATATTTTTGTAACCCTGTTGGAAAAGGTAGAGAAGGTGTTTGTGGCTGCAACCT ]
[-] EMBL CB661348 [ CTTGTGAGCTACTATTTTAATTGTTTTCTACTTAGACGGAGGTGTTATCAGAATAGGATGACTCCAAATAACATAGATAGTGATGATGAGGATGAGACAGAATTTGGATTCTTGGGTAACCGCCTTGGTCATAATGCAACTAAGTATGACAGTTCCAAGTATACCCTTTGCATCGAAAGTACACACTGCATGGATCTCAACCAATAGTTTCTGATCAGCATTAATGAAGATGATTGAAGTTTAGTAGTTCACTTCTCTTGCTGTTGAGTGTCTTGGATAAGGTTTAAATAGGCGGATTGGAGTTTTGGTGTTTAACTTCTCTCATTGCCAATGGTTTCTGCGCGATATAAAGAAGCTTACTGAAATTTGGCAATTAATTTCTTCCATTGCCAATGGTTTCTGATCAGATATAGAGAAGCCGATTGAGTTTGATAATACACTTCTCTCTTTGCGAAAAGTTTCTGATCAGATGAATGCTTTCATCCACTGATTTCTTATGCAGACGGAAATGTAAATGCTTAAGTGCAAGCCAATCATTTGAACAAGTTGCTTACCGCTGCGGAAGATTTGACCGAAGCTTGCGATTGAAGTTGGGAGGCAAGTTTTGATAGAGTGTAGTGGCACTGATATGTGAACAATCACATGGATTCATTATATCCACAAGGTGAAAAAGAGAACAGCGGT ]
[+] EMBL CA764587 [ TCTTGGGTAACCGCCTTGGTCATAATGCAACTAAGTATGACAGTTCCAAGTATACCCTTTGCATCGAAAGTACACACTGCATGGATCTCAACCAATAGTTGCTGATCAGCATTAATGAAGATGATTGAAGTTTAGTAGTTCACTTCTCTTGCTGTTGAGTGTCTTGGATAAGGTTTAAATAGGCGGATTGGAGTTTTGGTGTTTAACTTCTCTCATTGCCAATGGTTTCTGCGCGATATAAAGAAGCTTACTGAAATTTGGCAATTAATTTCTTCCATTGCCAATGGTTTCTGATCAGTTATAGAGAAGCCGATTGAGTTTGATAATACACTTCTCTCTTTGCGAAAAGTTTCTGATCAGATGAATGCTTTCATCCACTGATTTCTTATGCAGACGGAAATGTAAATGCTTAAGTGCAAGCCAATCATTTGAACAAGTTGCTTACCGCTGCGGAAGA TTGACCGAAGCTTGCGATTGAAGTTGGGAGGCAAGTTTTGATAGAGTGTAGTGGCACTGATATGTGAACAATCACATGGATTCATTATATCCACAAGGTGAAAAAGAGAACAGCGGTAGCATTTTTACCGATGCTTCCTTGAAGGTATCACATGTACCATTTTCTAGTTTTATCCTTTGTGTAAAGTAGTTTTGCATACATTGCACAGTAGTATGATTAACTGTTCCTTG]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||