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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_7789#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3665 fasta sequence
[CACTCCCACCACGGCGTGGCGCGTGGGACGGTAGGCGGCCCCGTTACCGACAAGCGAAGCAAAGAGAGGCGAGGCGACCAGCTTGACGGAACACGAGCCGAGCGGCCGAATTCCGGTGGCTTCGACTTCGATCGGGAGCGGGAGGGCGGCGCGACGCGGCGGCGAGAGGCCGAATGGGCTCGTCGGCTACTCCGTCGACGGCGGCGAGCGCGCCGGGCCGGCGCAAGGTGGCGCTCTACCTCGCGCTCCTTACCCTGCAGTACGGCGCCCAGCCCCTCATCTCCAAGCGCTTCGTCAGGCAAGAAGTTATAGTGACTACATTGGTTCTTTCAATCGAAGTAGCAAAGGTTATATGTGCAGTCATTTTATTGGTGGCAGAAGGTAGTCTGAAGAAGCAATTCAATAATTGGAGTATCACCAGATCACTTACTGCATCAGGACTTCCCGCTGCTATATATGCATTGCAGAATAGCTTACTGCAGATATCATACAAGAATTTGGATTCATTGACCTTCTCAATCCTTAACCAGACCAAGCTATTATTCACAGCATTCTTCACTTATCTTATTTTGGGGTATGTCCTGGTGATACCTCCTATTTACATATTACAATGTATTGATGATGCACATGATCTTATGAAGTTATAACCATGAAGTGTTTGTGTCACTAATATTTGAACTTCCCTTAATGAATGCCACTGTTTGGCCTGGCATGATCTTAACATTTGAATTTTTACTGTAAATTTATTATTTTACAATATATCATTGACACTTTTTACTGTTAATTTATTTTACAATATATTATTTACAATCACAGAATTATTACCATATGGATGTGTTTTTGTTTAAGTACAAATATAATGGTACTGTTTGTGTGCCACTAAATCTTTGTTTTGCTAGATTTACAATGTTTGAATCAAATACATGGGAATCTTGCAAAAGTCAATGTAAGGAGTAATGTTGTATTCAAGCCACTGCTAAAACAATAGGTTCGCTTTGTTTATATGCATAGTTTTATGGTTCAATCCTTTAAATGGTCCTAGATCTCCACCCAAGGGAAAACTAGTTGTCCTGATTTTTGCATATTATATAACTAGGCTTTAACTGAAATCCTTATTTACCATCCATGGTCACTGTTTTAGGGATTGCAATTTAAGTTCATGATATTTAAGACTTTTTCCTTAACAAATCAAGTTAAAACTCTATTGGCCTTGCTGGTCGCATCATTATCGGGTTTATTTTCTGTACCATTTCCCTTTTTAATTCATTGACATATGGTGAGTTGGTGACAAGCCAGAAAGAAACAAAGTTAAGGACTGGAACATTTTGTTCCGCGTCACCAAAAGATGCACAATTTAGCTATTTATGACTGCGTGTAATTTAATACCACAGAATGCCGCACATGAAATCCTAAATTGCCCTTTGTTCCACCATACAGCCAATTTGTCCCTTGCGTTTCCTCTATTGCCAGCATCTTTACCATTCTTTTCGTAAATGCACCAAGCAGAGGTTGCTGACAGGTTAGGAATGTGGTGGGGTTGTGGCTTGATTGGGCAGTGGCAACAATTAAACACAAGGGTGATGATGGTGTGGTGCTTTTGAGAATCCGGAAAACGGCAGAAGAAAGGAAGATGATTGTGGATCTGAGCAGTAGCTCAAGAATTGCAGCCATGCCTTATCCATGTGTTGACCAGCAGGACGTCCATATTGACCATGTGTGGTTAGTGTGGGGATGGAAGCCTGTTACCAGCATCCTTGCTGGCCACTGGCTACCACCCACCACCACCTTTGCTTCAAGTCCGACCACATCATCTATGAGCCTGCTTTGAAAAAGAGAGGTGAGAGGGATGATGTGTGCCATTTTTCGTTGTTGGTTCCTGTTGTCACTCGTACTTCCTGCCCACCATTGAGGATGGTGTCCACACGCTAAAGGAGGTAAGGACTGAGTAGGAAAAAGAGGACAAGACAAGCAAAATAGAAAATGACTGGATCCCTTAATTGCCGGGAATTGTATTTTTTAAAAGATTGGAGGAAACCAGTATTGGAGTGCGTTAGAAAAGTTCAGTTCTATATAGCTAACTAGATGATGCGCCGTGCTTTGTTGTGGAATATATGCTAGATATTGTAGAAATGATTTGGATTGAAATATTGTAGAAATGATTTGAAAATGATGATTTAGCATATGTATGTTTAGTTTTAGAATGAAATAAATTATAGATATAATTACTATATGCTTGCATGTTGAGCTTTGTGTGCTTAGTAGGTTGATGTGGCATGCTTGCATGTTAGGTTTTAGGAGTGCTAATAAATACTATGCTTGCATGTTGAGCTTTAGGTGTTTAGTGGGCATTAGCTTTATAGAAAGAAGGGATTAGATTTATTACTACAAAACCTTCACCACCTACTTTTTCCTGGTATTTGGTAGAAGTTAAACCAAAACAAGGGTATTTGGTAAAAGTTAACCAAAACAAGCCCATTACATATTATTCTTCACTACATGTCATGCAGGATTAGAGCTAGGGTTACACACCTGTTACTAGTTACTACACGGAACATGAATCGTTTGGTTGTGTTCTAACAACTGCCCTTTATATTGTTTCCTTTTTTCTTATGCTCCACATGTCACATGCTGGTCTATTCTGTCACTAAACATCTGAATTAAGGGCCTATCCATTAATTTTATCTCTTTATGGATTATATCATGCAGGCAAAAGCAATCACCCAAGCAAATTTTTGCATTAACCCTCTTAATCGCTGCTGCGGTCCTTTTGAGCATTGGGGAGAGCAGCAGCAAAGGTTCTGGTGGTGGCAATTCAGACTATATCTTGCTCTATGGAATCATTCCTGTTACAGTTGCATCTGTATTGTCTGGTTTGGCCTCGTCTTTGTGCCAGTGGGCATCTCAGGTTAAAAAGCATACCTCCTACATGATGACTATAGAGATGTCGTTTATTGGGAGCATGTGCTTGCTAGCAAGTACTTCTCAATCACCAGATGGGGAAGCCATCAGAAAGCATGGTTTTTTCCATGAATGGACTTTGTTGACAGTGGTGCCAGTATTAATGAATGCTGTTGGTGGAATTCTTGTTGGTCTGGTCACAACATATGCAGGAGGTGTTAGAAAGGGTTTTGTGATAGTGTCAGCTCTCCTTGTAACTGCACTACTACAATTTATATTTGACGGAAAGCCTCCATCACTCTATTGCCTGATAGCATTACCACTTGTCATGACAAGCATATTTATTTACCAGAAGTATCCATATGTTGATAGAAAGAAGAAAGACTGATAAGCTTGCTCAGAAGAGAAGGGAATTATTTAGCATCAGCACAACATAAATACATTATGCTAACCTCATTTTGATCCCACGAAAGTTGGATGCGCCTTGAATGGGCCATATATGACCTTGAAGAGTGTCTCTTCATGAAGCTATGTATCATTCATCTAATGATCTCTATATTAAATGGATCACATGTTCACAAAACATATGGCTGGAGTTTATTCCGGCAGTCAGTTTGATATTAGTTGTATTTTCCATTGACTTGATTTTCTTCTTTTACATTAGCAAGTGGTTTGCGTATAGCTATATATGTTATATATCTGAACAACTTGGGAACTGAATGTATCTTTCAGATGGTATTCTGTACCTTTATATCAAGATAAAAAAA]
[+] EMBL AK066007 [CACTCCCACCACGGCGTGGCGCGTGGGACGGTAGGCGGCCCCGTTACCGACAAGCGAAGCAAAGAGAGGCGAGGCGACCAGCTTGACGGAACACGAGCCGAGCGGCCGAATTCCGGTGGCTTCGACTTCGATCGGGAGCGGGAGGGCGGCGCGACGCGGCGGCGAGAGGCCGAATGGGCTCGTCGGCTACTCCGTCGACGGCGGCGAGCGCGCCGGGCCGGCGCAAGGTGGCGCTCTACCTCGCGCTCCTTACCCTGCAGTACGGCGCCCAGCCCCTCATCTCCAAGCGCTTCGTCAGGCAAGAAGTTATAGTGACTACATTGGTTCTTTCAATCGAAGTAGCAAAGGTTATATGTGCAGTCATTTTATTGGTGGCAGAAGGTAGTCTGAAGAAGCAATTCAATAATTGGAGTATCACCAGATCACTTACTGCATCAGGACTTCCCGCTGCTATATATGCATTGCAGAATAGCTTACTGCAGATATCATACAAGAATTTGGATTCATTGACCTTCTCAATCCTTAACCAGACCAAGCTATTATTCACAGCATTCTTCACTTATCTTATTTTGGGGTATGTCCTGGTGATACCTCCTATTTACATATTACAATGTATTGATGATGCACATGATCTTATGAAGTTATAACCATGAAGTGTTTGTGTCACTAATATTTGAACTTCCCTTAATGAATGCCACTGTTTGGCCTGGCATGATCTTAACATTTGAATTTTTACTGTAAATTTATTATTTTACAATATATCATTGACACTTTTTACTGTTAATTTATTTTACAATATATTATTTACAATCACAGAATTATTACCATATGGATGTGTTTTTGTTTAAGTACAAATATAATGGTACTGTTTGTGTGCCACTAAATCTTTGTTTTGCTAGATTTACAATGTTTGAATCAAATACATGGGAATCTTGCAAAAGTCAATGTAAGGAGTAATGTTGTATTCAAGCCACTGCTAAAACAATAGGTTCGCTTTGTTTATATGCATAGTTTTATGGTTCAATCCTTTAAATGGTCCTAGATCTCCACCCAAGGGAAAACTAGTTGTCCTGATTTTTGCATATTATATAACTAGGCTTTAACTGAAATCCTTATTTACCATCCATGGTCACTGTTTTAGGGATTGCAATTTAAGTTCATGATATTTAAGACTTTTTCCTTAACAAATCAAGTTAAAACTCTATTGGCCTTGCTGGTCGCATCATTATCGGGTTTATTTTCTGTACCATTTCCCTTTTTAATTCATTGACATATGGTGAGTTGGTGACAAGCCAGAAAGAAACAAAGTTAAGGACTGGAACATTTTGTTCCGCGTCACCAAAAGATGCACAATTTAGCTATTTATGACTGCGTGTAATTTAATACCACAGAATGCCGCACATGAAATCCTAAATTGCCCTTTGTTCCACCATACAGCCAATTTGTCCCTTGCGTTTCCTCTATTGCCAGCATCTTTACCATTCTTTTCGTAAATGCACCAAGCAGAGGTTGCTGACAGGTTAGGAATGTGGTGGGGTTGTGGCTTGATTGGGCAGTGGCAACAATTAAACACAAGGGTGATGATGGTGTGGTGCTTTTGAGAATCCGGAAAACGGCAGAAGAAAGGAAGATGATTGTGGATCTGAGCAGTAGCTCAAGAATTGCAGCCATGCCTTATCCATGTGTTGACCAGCAGGACGTCCATATTGACCATGTGTGGTTAGTGTGGGGATGGAAGCCTGTTACCAGCATCCTTGCTGGCCACTGGCTACCACCCACCACCACCTTTGCTTCAAGTCCGACCACATCATCTATGAGCCTGCTTTGAAAAAGAGAGGTGAGAGGGATGATGTGTGCCATTTTTCGTTGTTGGTTCCTGTTGTCACTCGTACTTCCTGCCCACCATTGAGGATGGTGTCCACACGCTAAAGGAGGTAAGGACTGAGTAGGAAAAAGAGGACAAGACAAGCAAAATAGAAAATGACTGGATCCCTTAATTGCCGGGAATTGTATTTTTTAAAAGATTGGAGGAAACCAGTATTGGAGTGCGTTAGAAAAGTTCAGTTCTATATAGCTAACTAGATGATGCGCCGTGCTTTGTTGTGGAATATATGCTAGATATTGTAGAAATGATTTGGATTGAAATATTGTAGAAATGATTTGAAAATGATGATTTAGCATATGTATGTTTAGTTTTAGAATGAAATAAATTATAGATATAATTACTATATGCTTGCATGTTGAGCTTTGTGTGCTTAGTAGGTTGATGTGGCATGCTTGCATGTTAGGTTTTAGGAGTGCTAATAAATACTATGCTTGCATGTTGAGCTTTAGGTGTTTAGTGGGCATTAGCTTTATAGAAAGAAGGGATTAGATTTATTACTACAAAACCTTCACCACCTACTTTTTCCTGGTATTTGGTAGAAGTTAAACCAAAACAAGGGTATTTGGTAAAAGTTAACCAAAACAAGCCCATTACATATTATTCTTCACTACATGTCATGCAGGATTAGAGCTAGGGTTACACACCTGTTACTAGTTACTACACGGAACATGAATCGTTTGGTTGTGTTCTAACAACTGCCCTTTATATTGTTTCCTTTTTTCTTATGCTCCACATGTCACATGCTGGTCTATTCTGTCACTAAACATCTGAATTAAGGGCCTATCCATTAATTTTATCTCTTTATGGATTATATCATGCAGGCAAAAGCAATCACCCAAGCAAATTTTTGCATTAACCCTCTTAATCGCTGCTGCGGTCCTTTTGAGCATTGGGGAGAGCAGCAGCAAAGGTTCTGGTGGTGGCAATTCAGACTATATCTTGCTCTATGGAATCATTCCTGTTACAGTTGCATCTGTATTGTCTGGTTTGGCCTCGTCTTTGTGCCAGTGGGCATCTCAGGTTAAAAAGCATACCTCCTACATGATGACTATAGAGATGTCGTTTATTGGGAGCATGTGCTTGCTAGCAAGTACTTCTCAATCACCAGATGGGGAAGCCATCAGAAAGCATGGTTTTTTCCATGAATGGACTTTGTTGACAGTGGTGCCAGTATTAATGAATGCTGTTGGTGGAATTCTTGTTGGTCTGGTCACAACATATGCAGGAGGTGTTAGAAAGGGTTTTGTGATAGTGTCAGCTCTCCTTGTAACTGCACTACTACAATTTATATTTGACGGAAAGCCTCCATCACTCTATTGCCTGATAGCATTACCACTTGTCATGACAAGCATATTTATTTACCAGAAGTATCCATATGTTGATAGAAAGAAGAAAGACTGATAAGCTTGCTCAGAAGAGAAGGGAATTATTTAGCATCAGCACAACATAAATACATTATGCTAACCTCATTTTGATCCCACGAAAGTTGGATGCGCCTTGAATGGGCCATATATGACCTTGAAGAGTGTCTCTTCATGAAGCTATGTATCATTCATCTAATGATCTCTATATTAAATGGATCACATGTTCACAAAACATATGGCTGGAGTTTATTCCGGCAGTCAGTTTGATATTAGTTGTATTTTCCATTGACTTGATTTTCTTCTTTTACATTAGCAAGTGGTTTGCGTATAGCTATATATGTTATATATCTGAACAACTTGGGAACTGAATGTATCTTTCAGATGGTATTCTGTACCTTTATATCAAGAT ]
[+] EMBL CB666816 [ GGGACGGTAGGCGGCCCCGTTACCGACAAGCGAAGCAAAGAGAGGCGAGGCGACCAGCTTGACGGAACACGAGCCGAGCGGCCGAATTCCGGTGGCTTCGACTTCGATCGGGAGCGGGAGGGCGGCGCGACGCGGCGGCGAGAGGCCGAATGGGCTCGTCGGCTACTCCGTCGACGGCGGCGAGCGCGCCGGGCCGGCGCAAGGTGGCGCTCTACCTCGCGCTCCTTACCCTGCAGTACGGCGCCCAGCCCCTCATCTCCAAGCGCTTCGTCAGGCAAGAAGTTATAGTGACTACATTGGTTCTTTCAATCGAAGTAGCAAAGGTTATATGTGCAGTCATTTTATTGGTGGCAGAAGGTAGTCTGAAGAAGCAATTCAATAATTGGAGTATCACCAGATCACTTACTGCATCAGGACTTCCCGCTGCTATATATGCATTGCAGAATAGCTTACTGCAGATATCATACAAGAATTTGGATTCATTGACCTTCTCAATCCTTAACCAGACCAAGCTATTATTCACAGCATTCTTCACTTATCTTATTTTGGGGTATGTCCTGGTGATACCTCCTATTTACATATTACAATGTATTGATGATGCACATGATCTTATGAAGTTATAACCATGAAGTGTTTGTGTCACTAATATTTGAACTTCCCTTAATGAATGCCACTGTTTGGCCTGGCATGATCTTAACATTTGAATTTTTACTGTAAATTTATTATTTTACAATATATCATTGACACTTTTTACTGTTAATTTATTTTACAATATATTATTTANCATCACAGAATTATTACCATATGGATG ]
[-] EMBL CA759999 [ AGCAAGTACTTCTCAATCACCAGATGGGGAAGCCATCAGAAAGCATGGTTTTTTCCATGAATGGGCTTTGTTGACAGTGGTGCCAGTATTAATGAATGCTGTTGGTGGAATTCTTGTTGGTCTGGTCACAACATATGCAGGAGGTGTTAGAAAGGGTTTTGTGATAGTGTCAGCTCTCCTTGTAACTGCACTACTACGATTTATATTTGACGGAAAGCCTCCATCACTCTATTGCCTGATAGCATTACCACTTGTCATGACAAGCACATTTATTTACCAGAAGTATCCATATGTTGATAGAAAGAGGAAAGACTGATAAGCTTGCTCAGAAGAGAAGGGAATTATTTAGCATCAGCACAACATAAATACATTATGCTAACCTCATTTTGATCCCACGAAAG TGGATGCGCCTTGAATGGGCCATATATGACCTTGAAGAGTGTCTCTTCATGAAGCTATGTATCATTCATCTAATGATCTCTATATTAAATGGATCACATGTTCACAAAACATATGGCTGGAGTTTATTCCGGCAGTCAGTTTGATATTAGTTGTATTTTCCATTGACTTGATTTTCTTCTTTTACATTAGCAAGTGGTATGCGTATAGCCATATATGTTATATATCTGAACAACTTGGGAACTGAATGTATCTTTCAGATGATATTCTGTACCTTTATATCAAAAAAAAAAAA]
consensusID : consensus_7789#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 872 fasta sequence
[TCTGGGTTTGGCCTCGTCTTTGTGCCAGTGGGCATCTCAGGTTGTACTTGTCATTGTACTTTCCATGAAGCATCCCATTGCCATTGTTGACCCTTTCAATAAAACGCAGGTTAAAAAGCATACCTCCTACATGATGACTATAGAGATGTCGTTTATTGGGAGCATGTGCTTGCTAGCAAGTACTTCTCAATCACCAGATGGGGAAGCCATCAGAAAGCATGGTTTTTTCCATGAATGGACTTTGTTGACAGTGGTGCCAGTATTAATGAATGCTGTTGGTGGAATTCTTGTTGGTCTGGTCACAACATATGCAGGAGGTGTTAGAAAGGGTTTTGTGATAGTGTCAGCTCTCCTTGTAACTGCACTACTACAATTTATATTTGACGGAAAGCCTCCATCACTCTATTGCCTGATAGCATTACCACTTGTCATGACAAGCATATTTATTTACCAGAAGTATCCATATGTTGATAGAAAGAAGAAAGACTGATAAGCTTGCTCAGAAGAGAAGGGAATTATTTAGCATCAGCACAACATAAATACATTATGCTAACCTCATTTTGATCCCACGAAAGTTGGATGCGCCTTGAATGGGCCATATATGACCTTGAAGAGTGTCTCTTCATGAAGCTATGTATCATTCATCTAATGATCTCTATATTAAATGGATCACATGTTCACAAAACATATGGCTGGAGTTTATTCCGGCAGTCAGTTTGATATTAGTTGTATTTTCCATTGACTTGATTTTCTTCTTTTACATTAGCAAGTGGTATGCGTATAGCTATATATGTTATATATCTGAACAACTTGGGAACTGAATGTATCTTTCAGATGATATTCTGTACCTTTATATCAAGATTAAATCTGTC]
[-] EMBL CB666817 [TCTGGGTTTGGCCTCGTCTTTGTGCCAGTGGGCATCTCAGGTTGTACTTGTCATTGTACTTTCCATGAAGCATCCCATTGCCATTGTTGACCCTTTCAATAAAACGCAGGTTAAAAAGCATACCTCCTACATGATGACTATAGAGATGTCGTTTATTGGGAGCATGTGCTTGCTAGCAAGTACTTCTCAATCACCAGATGGGGAAGCCATCAGAAAGCATGGTTTTTTCCATGAATGGACTTTGTTGACAGTGGTGCCAGTATTAATGAATGCTGTTGGTGGAATTCTTGTTGGTCTGGTCACAACATATGCAGGAGGTGTTAGAAAGGGTTTTGTGATAGTGTCAGCTCTCCTTGTAACTGCACTACTACAATTTATATTTGACGGAAAGCCTCCATCACTCTATTGCCTGATAGCATTACCACTTGTCATGACAAGCATATTTATTTACCAGAAGTATCCATATGTTGATAGAAAGAAGAAAGACTGATAAGCTTGCTCAGAAGAGAAGGGAATTATTTAGCATCAGCACAACATAAATACATTATGCTAACCTCATTTTGATCCCACGAAAGTTGGATGCGCCTTGAATGGGCCATATATGACCTTGAAGAGTGTCTCTTCATGAAGCTATGTATCATTCATCTAATGATCTCTATATTAAATGGATCACATGTTCACAAAACATATGGCTGGAGTTTATTCCGGCAGTCAGTTTGATATTAGTTGTATTTTCCATTGACTTGATTTTCTTCTTTTACATTAGCAAGTGGTATGCGTATAGCTATATATGTTATATATCTGAACAACTTGGGAACTGAATGTATCTTTCAGATGATATTCTGTACCTTTATATCAAGATTAAATCTGTC]
consensusID : consensus_7789#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 500 fasta sequence
[TCATCTCCAAGCGCTTCGTCAGGCAAGAAGTTATAGTGACTACATTGGTTCTTTCAATCGAAGTAGCAAAGGTTATATGTGCAGTCATTTTATTGGTGGCAGAAGGTAGTCTGAAGAAGCAATTCAATAATTGGAGTATCACCAGATCACTTACTGCATCAGGACTTCCCGCTGCTATATATGCATTGCAGAATAGCTTACTGCAGATATCATACAAGAATTTGGATTCATTGACCTTCTCAATCCTTAACCAGACCAAGCTATTATTCACAGCATTCTTCACTTATCTTATTTTGGGAGGTGCTGACAGGTAGGAATGGGTGGGGGGTTGTGGCTTGATTGGGCAGTGGCAACAATTAAACACAAGGGTGATGATGGTTGTGGGTGCCTTTTGAGAATCCGGAAAACGGCAGAAGAAAGGAAGATGATTGTGGATCTGAGCAGTAGCTCAAGAATTGCAGCCATGCCTTATCCATGTGTTGACCAGCAGGACGTCCATA]
[+] EMBL CF324436 [TCATCTCCAAGCGCTTCGTCAGGCAAGAAGTTATAGTGACTACATTGGTTCTTTCAATCGAAGTAGCAAAGGTTATATGTGCAGTCATTTTATTGGTGGCAGAAGGTAGTCTGAAGAAGCAATTCAATAATTGGAGTATCACCAGATCACTTACTGCATCAGGACTTCCCGCTGCTATATATGCATTGCAGAATAGCTTACTGCAGATATCATACAAGAATTTGGATTCATTGACCTTCTCAATCCTTAACCAGACCAAGCTATTATTCACAGCATTCTTCACTTATCTTATTTTGGGAGGTGCTGACAGGTAGGAATGGGTGGGGGGTTGTGGCTTGATTGGGCAGTGGCAACAATTAAACACAAGGGTGATGATGGTTGTGGGTGCCTTTTGAGAATCCGGAAAACGGCAGAAGAAAGGAAGATGATTGTGGATCTGAGCAGTAGCTCAAGAATTGCAGCCATGCCTTATCCATGTGTTGACCAGCAGGACGTCCATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_7789#0 CACTCCCACCACGGCGTGGCGCGTGGGACGGTAGGCGGCCCCGTTACCGACAAGCGAAGC 60
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 AAAGAGAGGCGAGGCGACCAGCTTGACGGAACACGAGCCGAGCGGCCGAATTCCGGTGGC 120
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TTCGACTTCGATCGGGAGCGGGAGGGCGGCGCGACGCGGCGGCGAGAGGCCGAATGGGCT 180
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 CGTCGGCTACTCCGTCGACGGCGGCGAGCGCGCCGGGCCGGCGCAAGGTGGCGCTCTACC 240
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TCGCGCTCCTTACCCTGCAGTACGGCGCCCAGCCCCTCATCTCCAAGCGCTTCGTCAGGC 300
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 AAGAAGTTATAGTGACTACATTGGTTCTTTCAATCGAAGTAGCAAAGGTTATATGTGCAG 360
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TCATTTTATTGGTGGCAGAAGGTAGTCTGAAGAAGCAATTCAATAATTGGAGTATCACCA 420
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 GATCACTTACTGCATCAGGACTTCCCGCTGCTATATATGCATTGCAGAATAGCTTACTGC 480
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 AGATATCATACAAGAATTTGGATTCATTGACCTTCTCAATCCTTAACCAGACCAAGCTAT 540
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TATTCACAGCATTCTTCACTTATCTTATTTTGGGGTATGTCCTGGTGATACCTCCTATTT 600
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 ACATATTACAATGTATTGATGATGCACATGATCTTATGAAGTTATAACCATGAAGTGTTT 660
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 GTGTCACTAATATTTGAACTTCCCTTAATGAATGCCACTGTTTGGCCTGGCATGATCTTA 720
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 ACATTTGAATTTTTACTGTAAATTTATTATTTTACAATATATCATTGACACTTTTTACTG 780
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TTAATTTATTTTACAATATATTATTTACAATCACAGAATTATTACCATATGGATGTGTTT 840
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TTGTTTAAGTACAAATATAATGGTACTGTTTGTGTGCCACTAAATCTTTGTTTTGCTAGA 900
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TTTACAATGTTTGAATCAAATACATGGGAATCTTGCAAAAGTCAATGTAAGGAGTAATGT 960
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TGTATTCAAGCCACTGCTAAAACAATAGGTTCGCTTTGTTTATATGCATAGTTTTATGGT 1020
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TCAATCCTTTAAATGGTCCTAGATCTCCACCCAAGGGAAAACTAGTTGTCCTGATTTTTG 1080
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 CATATTATATAACTAGGCTTTAACTGAAATCCTTATTTACCATCCATGGTCACTGTTTTA 1140
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 GGGATTGCAATTTAAGTTCATGATATTTAAGACTTTTTCCTTAACAAATCAAGTTAAAAC 1200
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TCTATTGGCCTTGCTGGTCGCATCATTATCGGGTTTATTTTCTGTACCATTTCCCTTTTT 1260
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 AATTCATTGACATATGGTGAGTTGGTGACAAGCCAGAAAGAAACAAAGTTAAGGACTGGA 1320
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 ACATTTTGTTCCGCGTCACCAAAAGATGCACAATTTAGCTATTTATGACTGCGTGTAATT 1380
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TAATACCACAGAATGCCGCACATGAAATCCTAAATTGCCCTTTGTTCCACCATACAGCCA 1440
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 ATTTGTCCCTTGCGTTTCCTCTATTGCCAGCATCTTTACCATTCTTTTCGTAAATGCACC 1500
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 AAGCAGAGGTTGCTGACAGGTTAGGAATGTGGTGGGGTTGTGGCTTGATTGGGCAGTGGC 1560
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 AACAATTAAACACAAGGGTGATGATGGTGTGGTGCTTTTGAGAATCCGGAAAACGGCAGA 1620
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 AGAAAGGAAGATGATTGTGGATCTGAGCAGTAGCTCAAGAATTGCAGCCATGCCTTATCC 1680
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 ATGTGTTGACCAGCAGGACGTCCATATTGACCATGTGTGGTTAGTGTGGGGATGGAAGCC 1740
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TGTTACCAGCATCCTTGCTGGCCACTGGCTACCACCCACCACCACCTTTGCTTCAAGTCC 1800
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 GACCACATCATCTATGAGCCTGCTTTGAAAAAGAGAGGTGAGAGGGATGATGTGTGCCAT 1860
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TTTTCGTTGTTGGTTCCTGTTGTCACTCGTACTTCCTGCCCACCATTGAGGATGGTGTCC 1920
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 ACACGCTAAAGGAGGTAAGGACTGAGTAGGAAAAAGAGGACAAGACAAGCAAAATAGAAA 1980
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 ATGACTGGATCCCTTAATTGCCGGGAATTGTATTTTTTAAAAGATTGGAGGAAACCAGTA 2040
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TTGGAGTGCGTTAGAAAAGTTCAGTTCTATATAGCTAACTAGATGATGCGCCGTGCTTTG 2100
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TTGTGGAATATATGCTAGATATTGTAGAAATGATTTGGATTGAAATATTGTAGAAATGAT 2160
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TTGAAAATGATGATTTAGCATATGTATGTTTAGTTTTAGAATGAAATAAATTATAGATAT 2220
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 AATTACTATATGCTTGCATGTTGAGCTTTGTGTGCTTAGTAGGTTGATGTGGCATGCTTG 2280
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 CATGTTAGGTTTTAGGAGTGCTAATAAATACTATGCTTGCATGTTGAGCTTTAGGTGTTT 2340
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 AGTGGGCATTAGCTTTATAGAAAGAAGGGATTAGATTTATTACTACAAAACCTTCACCAC 2400
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 CTACTTTTTCCTGGTATTTGGTAGAAGTTAAACCAAAACAAGGGTATTTGGTAAAAGTTA 2460
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 ACCAAAACAAGCCCATTACATATTATTCTTCACTACATGTCATGCAGGATTAGAGCTAGG 2520
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 GTTACACACCTGTTACTAGTTACTACACGGAACATGAATCGTTTGGTTGTGTTCTAACAA 2580
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 CTGCCCTTTATATTGTTTCCTTTTTTCTTATGCTCCACATGTCACATGCTGGTCTATTCT 2640
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 GTCACTAAACATCTGAATTAAGGGCCTATCCATTAATTTTATCTCTTTATGGATTATATC 2700
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 ATGCAGGCAAAAGCAATCACCCAAGCAAATTTTTGCATTAACCCTCTTAATCGCTGCTGC 2760
consensus_7789#1 ------------------------------------------------------------
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 GGTCCTTTTGAGCATTGGGGAGAGCAGCAGCAAAGGTTCTGGTGGTGGCAATTCAGACTA 2820
consensus_7789#1 -------------TCTGGGTTTGGCCTC-GTCTTTGTGCCAGTGG--GCATCTCAGGTTG 44
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TATCTTGCTCTATGGAATCATTCCTGTTACAGTTGCATCTGTATTGTCTGGTTTGGCCTC 2880
consensus_7789#1 TA-CTTGTC-------ATTGTACTTTCCAT-GAAGCATCC-CATTGCCATTGTTGACC-- 92
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 GTCTTTGTGCCAGTGGGCATCTCAGGTTAAAAAGCATACCTCCTACATGATGACTATAGA 2940
consensus_7789#1 --CTTT----CAATAA--AACGCAGGTTAAAAAGCATACCTCCTACATGATGACTATAGA 144
consensus_7789#2 -------------------------------------------------TCATCTCCAAG 11
** *
consensus_7789#0 GATGTCGTTTATTGGGAGCATGTGCTTGCTAGCAAGTACTTCTCAATCACCAGATGGGGA 3000
consensus_7789#1 GATGTCGTTTATTGGGAGCATGTGCTTGCTAGCAAGTACTTCTCAATCACCAGATGGGGA 204
consensus_7789#2 CGCTTCGTCAGGCAAGAAGTTATAGTGACTACATTGGTTCTTTCAATCG--AAGTAGCAA 69
**** ** * * * *** * * ****** * * * *
consensus_7789#0 AGCCATCAGAAAGCATGGTTTTTTCCATGAATGGACTTTGTTGACAGTGGTGCCAGTATT 3060
consensus_7789#1 AGCCATCAGAAAGCATGGTTTTTTCCATGAATGGACTTTGTTGACAGTGGTGCCAGTATT 264
consensus_7789#2 AGGTTATATGTGCAGTCATTTTATTGGTGGCAGAAGGTAGTCTGAAGAAGCAATTCAATA 129
** * * **** * ** * * * ** ** * **
consensus_7789#0 AATGAATGCTGTTGGTGGAATTCTTGTTGGTCTGGTCACAACATATGCAGGAGGTGTTAG 3120
consensus_7789#1 AATGAATGCTGTTGGTGGAATTCTTGTTGGTCTGGTCACAACATATGCAGGAGGTGTTAG 324
consensus_7789#2 ATTGGA--GTATCACCAGATCACTTACTGC----ATCAGGACTTCCC-----GCTGCTAT 178
* ** * * * ** *** ** *** ** * * ** **
consensus_7789#0 AAAGGGTTTTGTGATAGTGTCAGCTCTCCTTGTAACTGCACTACTACAATTTATATTTGA 3180
consensus_7789#1 AAAGGGTTTTGTGATAGTGTCAGCTCTCCTTGTAACTGCACTACTACAATTTATATTTGA 384
consensus_7789#2 ATATG-CATTGCAGAA----TAGCTTAC--TGCAGATATCATACAAGAATTTGGATTCAT 231
* * * *** * **** * ** * * *** * ***** ***
consensus_7789#0 CGGAAAGCCTCCATCACTCTATTGCCTGATAGCATTACCACTTGT--CATGACAAGCATA 3238
consensus_7789#1 CGGAAAGCCTCCATCACTCTATTGCCTGATAGCATTACCACTTGT--CATGACAAGCATA 442
consensus_7789#2 TGA----CCTTC-TCAATCCTTAACCAGACCAAGCTATTATTCACAGCATTCTTCACTTA 286
* *** * *** ** * ** ** ** * * *** * **
consensus_7789#0 TTTATTTACCAGAAGTATCCATATGTTGATAGAAAGAAGAAAGACTGATAAGCTTGCTCA 3298
consensus_7789#1 TTTATTTACCAGAAGTATCCATATGTTGATAGAAAGAAGAAAGACTGATAAGCTTGCTCA 502
consensus_7789#2 TCTTATTTTGGGAGGTGCTGACAGGTAG---GAATGGGTGGGGGGTTGTG-GCTTGATTG 342
* * ** ** ** * * ** * *** * * * * ***** *
consensus_7789#0 GAAGAGAAGGGAATTATTTAGCATCAGCACAACATAAATACATTATGCTAACCTCATTTT 3358
consensus_7789#1 GAAGAGAAGGGAATTATTTAGCATCAGCACAACATAAATACATTATGCTAACCTCATTTT 562
consensus_7789#2 G--GCAGTGGCAACAATTAAACACAAGGGTGATG---ATG-GTTGTGGGTGCCTTTTGAG 396
* * ** ** *** * ** ** * ** ** ** *** *
consensus_7789#0 GATCCCACGAAAGTTGGATGCGCCTTGAATGGGCCATATATGACCTTGAAGAGTGTCTCT 3418
consensus_7789#1 GATCCCACGAAAGTTGGATGCGCCTTGAATGGGCCATATATGACCTTGAAGAGTGTCTCT 622
consensus_7789#2 AATCCGGAAAACGGCAGAAGAA-----AGGAAGATGATTGTGGATCTGAGCAGTAGCTCA 451
**** ** * ** * * * * ** *** *** ***
consensus_7789#0 TCA--TGAAGCTATGTATCATTCATCTAATGATCTCTATATTAAATGGATCACATGTTCA 3476
consensus_7789#1 TCA--TGAAGCTATGTATCATTCATCTAATGATCTCTATATTAAATGGATCACATGTTCA 680
consensus_7789#2 AGAATTGCAGCCATGCCTTATCCATGTGTTGACC-----AGCAGGACGTCCATA------ 500
* ** *** *** * ** *** * *** * * * * ** *
consensus_7789#0 CAAAACATATGGCTGGAGTTTATTCCGGCAGTCAGTTTGATATTAGTTGTATTTTCCATT 3536
consensus_7789#1 CAAAACATATGGCTGGAGTTTATTCCGGCAGTCAGTTTGATATTAGTTGTATTTTCCATT 740
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 GACTTGATTTTCTTCTTTTACATTAGCAAGTGGTTTGCGTATAGCTATATATGTTATATA 3596
consensus_7789#1 GACTTGATTTTCTTCTTTTACATTAGCAAGTGGTATGCGTATAGCTATATATGTTATATA 800
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 TCTGAACAACTTGGGAACTGAATGTATCTTTCAGATGGTATTCTGTACCTTTATATCAAG 3656
consensus_7789#1 TCTGAACAACTTGGGAACTGAATGTATCTTTCAGATGATATTCTGTACCTTTATATCAAG 860
consensus_7789#2 ------------------------------------------------------------
consensus_7789#0 ATAAAAAAA--- 3665
consensus_7789#1 ATTAAATCTGTC 872
consensus_7789#2 ------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||