cluster # 7888

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Oryza sativa
cluster # 7888 cluster # 7888 Sequences # 5 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_7888#0 length = 468 sequences # 5

consensusID : consensus_7888#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 468
fasta sequence

                              [CCGGCGGATCGGGCTCCGCCGCCACGGAGGGCGACCAGAAGGGAAAGGGAAAGGTCGTCGAAGGTTCGCAAGAGGCCGCCAAGA-AGGACAAGGTCGATTCCCAGCTAAAGAAGTTCATCAGGAGGAGCTTTCTTGCGGTTTCTGAAGGCTTCAAGAAAAAGCTTTCAGATAGACAAGGAAAGCAACTGGATGAGGCAAGCACGTCAAACTCGCCACCTCATGTGGATCACAAGAAAATTCCCATGGAAGAAGCTGTGTATCATTATTTTGGGGACATCCATAATGTTCTGAGGCTATCGAAAAGGGAAAGGGAGTCAGTTATCATTATGCGCTTGGTGCCTCTTCATAGTCATTATTCAGCATTGAGGCCAGTGTATAGAG-ATGGGGAGAGTTTCTACAGGAGCTTCATATTTTCCTACCTGGAGCAAATTGTTGATAGAGTAGACATGGGTGAGGGAAGATCGCCTT]

[+] EMBL CB641098             [CCGGCGGATCGGGCTCCGCCGCCACGGAGGGCGACCAGAAGGGAAAGGGAAAGGTCGTCGAAGGTTCGCAAGAGGCCGCCAAGA AGGACAAGGTCGATTCCCAGCTAAAGAAGTTCATCAGGAGGAGCTTTCTTGCGGTTTCTGAAGGCTTCAAGAAAAAGCTTTCAGATAGACAAGGAAAGCAACTGGATGAGGCAAGCACGTCAAACTCGCCACCTCATGTGGATCACAAGAAAATTCCCATGGAAGAAGCTGTGTATCATTATTTTGGGGACATCCATAATGTTCTGAGGCTATCGAAAAGGGAAAGGGAGTCAGTTATCATTATGCGCTTGGTGCCTCTTCATAGTCATTATTCAGCATTGAGGCCAGTGTATAGAGAATGGGGAGAGTTTCTACAGGAGCTTCATATTTTCCTACCTGGAGCAAATTGTTGATAGAGTAGACATGGGTGAGGGAAGATCGCCTT]
[+] EMBL CB641325             [CCGGCGGATCGGGCTCCGCCGCCACGGAGGGCGACCAGAAGGGAAAGGGAAAGGTCGTCGAAGGTTCGCAAGAGGCCGCCAATA ATGACAAGGTCGATTCCCAGCTAAAGAAGTTCATCAGGAGGAGCTTTCTTGCGGTTTCTGAAGGCTTCAAGAAAAAGCTTTCAGATAGACAAGGAAAGCAACTGGATGAGGCAAGCACGTCAAACTCGCCACCTCATGTGGATCACAAGAAAATTCCCATGGAAGAAGCTGTGTATCATTATTTTGGGGACATCCATAATGTTCTGAGGCTATCGAAAAGGGAAAGGGAGTCAGTTATCATTATGCGCTTGGTGCCTCTTCATAGTCATTATTCAGCATTGAGGCCAGTGTATAGAG ATGGGGAGAGTTTCTACAGGAGCTTCATATTTTCCTACCTGGAGCAAATTGTTGATAGAGTAGACATGGGTGA GGAAGATCGCCT ]
[+] EMBL CB641074             [CCGGCGGATCGGGCTCCGCCGCCACGGAGGGCGACCAGAAGGGAAAGGGAAAGGTCGTCGAAGGTTCGCAAGAGGCCGCCAAGA AGGACATTGTCTATTCCCAGCTAAAGAAGTTCATCAGGAGGAGCTTTCTTGCGGTTTCTGAAGGCTTCAAGAAAA       AGATAGACAAGGAAAGCAACTGGATGAGGCAAGCACGTCAAACTCGCCACCTCATGTGGATCACAAGAAAATTCCCATGGAAGAAGCTGTGTATCATTATTTTGGGGACATCCATAATGTTCTGAGGCTATCGAAAAGGGAAAGGGAGTCAGTTATCATTATGCGCTTGGTGCCTCTTCATAGTCATTATTCAGCATTGAGGCCAGTGTATAGAG ATGGGGAGAGTTTCTACAGGAGCTTCATATTTTCCTACCTGGAGCAAATTGTTGATAGAGTACACA                     ]
[+] EMBL CB641324             [CCGGCGGATCGGGCTCCGCCGCCACGGAGGGCGACCAGAAGGGAAAGGGAAAGGTCGTCGAAGGTTCGCAAGAGGCCGCCATTATTGTACAAGGTCGATTCCCAGCTAAAGAAGTTCATCAGGAGGAGCTTTCTTGCGGTTTCTGAAGGCTTCAAGAAAAAGCTTTCAGATAGACAAGGAAAGCAACTGGATGAGGCAAGCACGTCAAACTCGCCACCTCATGTGGATCACAAGAAAATTCCCATGGAAGAAGCTGTGTATCATTATTTTGGGGACATCCATAATGTTCTGAGGCTATCGAAAAGGGAAAGGGAGTCAGTTATCATTATGCGCTTGGTGCCTCTTCATAGTCATTATTCACCATT                                                                                                         ]
[+] EMBL CB640432             [CCGGCGGATCGGGCTCCGCCGCCACGGAGGGCGACCAGAAGGGAAAGGGAAAGGTCGTCGAAGGTTCGCAAGAGGCCGCCAAGA AGGACAAGGTCGATTCCCAGCTAAAGAAGTTCATCAGGAGGAGCTTTCTTGCGGCTTCTGAAGGCTTCAAGAAAAAGCTTCCATATAGACAAGGAAAGCAACTGGATGAGGCAAGCACGTCAAACTCGCCACCTCATGTGGATCACAAGAAAATTCCCATGGAAGAAGCTGTGTATCATTATTTTGGGGACATCCATAAT                                                                                                                                                                                         ]




>consensus_7888#0
CCGGCGGATCGGGCTCCGCCGCCACGGAGGGCGACCAGAAGGGAAAGGGAAAGGTCGTCG
AAGGTTCGCAAGAGGCCGCCAAGAAGGACAAGGTCGATTCCCAGCTAAAGAAGTTCATCA
GGAGGAGCTTTCTTGCGGTTTCTGAAGGCTTCAAGAAAAAGCTTTCAGATAGACAAGGAA
AGCAACTGGATGAGGCAAGCACGTCAAACTCGCCACCTCATGTGGATCACAAGAAAATTC
CCATGGAAGAAGCTGTGTATCATTATTTTGGGGACATCCATAATGTTCTGAGGCTATCGA
AAAGGGAAAGGGAGTCAGTTATCATTATGCGCTTGGTGCCTCTTCATAGTCATTATTCAG
CATTGAGGCCAGTGTATAGAGATGGGGAGAGTTTCTACAGGAGCTTCATATTTTCCTACC
TGGAGCAAATTGTTGATAGAGTAGACATGGGTGAGGGAAGATCGCCTT

clustalw multiple alignements is not computed in this case