cluster # 8117

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 8117 cluster # 8117 Sequences # 5 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8117#0 length = 2041 sequences # 4

consensus_8117#1 length = 875 sequences # 1

consensusID : consensus_8117#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2041
fasta sequence

                              [ACACTGAACAAGTACCACTCCCACTGCCGGCGCTGCCCCCACCGGCGGCGGCAGCGGCGGCGGCGGAGGCCATGGCTGAGCTGCGGCATTCGACGGTGGCGGCGGCCGCGGCCCGCTCCTCCAACTCCCCCGCGAAGCGCGACTCCGACGCCTCTGCCGCCTCCTCCCCCTTCGCCTCCACCTCATCCGCGCGCGGCCGCGGCGGCGGCGACGACGACGACGGCAAGGATGCGCACCGCTCCTCCCCTCTCCTCCCTCATCACCACAAGCGCCTCGGCTTGCCCTCTCCCCTCCGCTCGCTCCTCGCCCTCGAGGACCCCAGGTCCCCCTCCGCGTCCTCCTCCTACCGGATCTTGTTCGCCCTCCTCGCGTTCCTCCTCCTCGCCGCCACCTTCTCCGCGACCTCCGTTTGGTCCCGCCTCAATGCGCCCTACTTGTGCCAGAAGGATGGGATCACGCTGCACTGCCCTGAGACGAAGGAAGCCCCCTCCCTATGGGAGAATCCACGTGCTGCTACCACGTCCTGGAAACCCTGTGCAGAGCGCCGCAGCAATGAACCATCAGATGTCCCACCTGAGAATGAAACCTCTGGATATATTTTTATTCATGCTGAGGGTGGACTGAACCAACAGCGTATAGCTATATGTAACGCTGTTGCAATTGCTAAGATAATGAAGGCAACGCTTATTTTGCCAGTTCTAAAGCAGGATCAAATATGGAAAGACCAGACGAAGTTTGAAGATATCTTTGACGTGGATCATTTTATAAACTATTTGAAGGATGATGTGCGCATTGTCCGAGACATTCCTGACTGGTTTACAGAAAAAGATGAGCTCTTTACTAGTATAAAGCGTACTGTGAAGAACATCCCAAAGTATGCA-TCTGCTCAGTTTTACATTGATAATGTACTCCCGAGGATCAAAGAGAAAAAGATAATGTCTATTAAGCCATTCGTCGACAGGTTGGGGTACGATAATGTCCCAATGGAGATTAACCGGCTACGATGCAGAGTTAATTATCATGCACTAAAGTTCCTGCCTGACATTGAAGAAATGGCTGATAAGCTGGCAGCAAGGATGAGGAACCGAACTGGCAGTGTAAATCCGTACATGGCTCTTCATCTGAGATTTGAGAAAGGAATGGTAGGCCTGTCCTTTTGTGATTTTGCTGGGACGCGGGAGGAGAAAGAGATGATGGCTGCTTATAGGCAGAAAGAATGGCCAAGGCGCTATAAGAATGGGTCTCACCTGTGGCCATTAGCTCTGCAAAAGAGAAAAGAAGGCCGTTGCCCTCTTGAGCCTGGCGAGATCGCTATCATCCTCCGGGCACTGGGTTACACAAGAGGAACACAGATATACGTTGCGTCAGGGCAAGTGTATGGCGGCAAAAACAGGATGGCTCCCCTCCGAAACATGTTCCCAAATTTGGTGACCAAGGAGGAGCTCGCCAGCGCGGCGGAGATGGCGCCGTTCCGGAAGCACGTGACGAGCCTGGCGGCGCTGGACTTCCTGGTGTGCCTGAGGTCGGACGCGTTCGTCATGACCCACGGCGGCAACTTCGCCAAGCTCATCATGGGGGCCCGCCGCTACGGGGGCCGCCACCGGCTCAAGTCCATCAAGCCCGACAAGGGCCTCATGTCCAAGTCCCTCGGCGACCCACACATGGGCTGGGCCGCCTTCTCCGACGACGTCGTCATCACCCACCAGACCAGGGCCGGGCTGCCCGAGCCCACTTTCCCCAACTACGACCTCTGGGAGAATCCTCTCACTCCCTGCATGTGTCCTACAGCCTGAACCCCCCTGATGAATCTTCAGGCTTGAAAGTTCAATTATACAGTTAGGATCACTGGCAGTATAGTGCTAGAACATTTTATGTTCTTGTTTTTTCGTTTTCGTTTTTTTTTTGCTCACGTAGTCCTATTACTAGCAGGATTTACCACCTCGATTGGTCAGCGAAATTCGAGCCCCAGCGAAGCGTACTCTTTTGCTAATTTTGAACAAACTTTAACATATTTCGAATGAATTATGACCTGAGATGAACG]

[+] EMBL AK119177             [ACACTGAACAAGTACCACTCCCACTGCCGGCGCTGCCCCCACCGGCGGCGGCAGCGGCGGCGGCGGAGGCCATGGCTGAGCTGCGGCATTCGACGGTGGCGGCGGCCGCGGCCCGCTCCTCCAACTCCCCCGCGAAGCGCGACTCCGACGCCTCTGCCGCCTCCTCCCCCTTCGCCTCCACCTCATCCGCGCGCGGCCGCGGCGGCGGCGACGACGACGACGGCAAGGATGCGCACCGCTCCTCCCCTCTCCTCCCTCATCACCACAAGCGCCTCGGCTTGCCCTCTCCCCTCCGCTCGCTCCTCGCCCTCGAGGACCCCAGGTCCCCCTCCGCGTCCTCCTCCTACCGGATCTTGTTCGCCCTCCTCGCGTTCCTCCTCCTCGCCGCCACCTTCTCCGCGACCTCCGTTTGGTCCCGCCTCAATGCGCCCTACTTGTGCCAGAAGGATGGGATCACGCTGCACTGCCCTGAGACGAAGGAAGCCCCCTCCCTATGGGAGAATCCACGTGCTGCTACCACGTCCTGGAAACCCTGTGCAGAGCGCCGCAGCAATGAACCATCAGATGTCCCACCTGAGAATGAAACCTCTGGATATATTTTTATTCATGCTGAGGGTGGACTGAACCAACAGCGTATAGCTATATGTAACGCTGTTGCAATTGCTAAGATAATGAAGGCAACGCTTATTTTGCCAGTTCTAAAGCAGGATCAAATATGGAAAGACCAGACGAAGTTTGAAGATATCTTTGACGTGGATCATTTTATAAACTATTTGAAGGATGATGTGCGCATTGTCCGAGACATTCCTGACTGGTTTACAGAAAAAGATGAGCTCTTTACTAGTATAAAGCGTACTGTGAAGAACATCCCAAAGTATGCA TCTGCTCAGTTTTACATTGATAATGTACTCCCGAGGATCAAAGAGAAAAAGATAATGTCTATTAAGCCATTCGTCGACAGGTTGGGGTACGATAATGTCCCAATGGAGATTAACCGGCTACGATGCAGAGTTAATTATCATGCACTAAAGTTCCTGCCTGACATTGAAGAAATGGCTGATAAGCTGGCAGCAAGGATGAGGAACCGAACTGGCAGTGTAAATCCGTACATGGCTCTTCATCTGAGATTTGAGAAAGGAATGGTAGGCCTGTCCTTTTGTGATTTTGCTGGGACGCGGGAGGAGAAAGAGATGATGGCTGCTTATAGGCAGAAAGAATGGCCAAGGCGCTATAAGAATGGGTCTCACCTGTGGCCATTAGCTCTGCAAAAGAGAAAAGAAGGCCGTTGCCCTCTTGAGCCTGGCGAGATCGCTATCATCCTCCGGGCACTGGGTTACACAAGAGGAACACAGATATACGTTGCGTCAGGGCAAGTGTATGGCGGCAAAAACAGGATGGCTCCCCTCCGAAACATGTTCCCAAATTTGGTGACCAAGGAGGAGCTCGCCAGCGCGGCGGAGATGGCGCCGTTCCGGAAGCACGTGACGAGCCTGGCGGCGCTGGACTTCCTGGTGTGCCTGAGGTCGGACGCGTTCGTCATGACCCACGGCGGCAACTTCGCCAAGCTCATCATGGGGGCCCGCCGCTACGGGGGCCGCCACCGGCTCAAGTCCATCAAGCCCGACAAGGGCCTCATGTCCAAGTCCCTCGGCGACCCACACATGGGCTGGGCCGCCTTCTCCGACGACGTCGTCATCACCCACCAGACCAGGGCCGGGCTGCCCGAGCCCACTTTCCCCAACTACGACCTCTGGGAGAATCCTCTCACTCCCTGCATGTGTCCTACAGCCTGAACCCCCCTGATGAATCTTCAGGCTTGAAAGTTCAATTATACAGTTAGGATCACTGGCAGTATAGTGCTAGAACATTTTATGTTCTTGTTTTTTCGTTTTCGTTTTTTTTTTGCTCACGTAGTCCTATTACTAGCAGGATTTACCACCTCGATTGGTCAGCGAAATTCGAGCCCCAGCGAAGCGTA                                                               ]
[+] EMBL AK065389             [        CAAGTACCACTCCCACTGCCGGCGCTGCCCCCACCGGCGGCGGCAGCGGCGGCGGCGGAGGCCATGGCTGAGCTGCGGCATTCGACGGTGGCGGCGGCCGCGGCCCGCTCCTCCAACTCCCCCGCGAAGCGCGACTCCGACGCCTCTGCCGCCTCCTCCCCCTTCGCCTCCACCTCATCCGCGCGCGGCCGCGGCGGCGGCGACGACGACGACGGCAAGGATGCGCACCGCTCCTCCCCTCTCCTCCCTCATCACCACAAGCGCCTCGGCTTGCCCTCTCCCCTCCGCTCGCTCCTCGCCCTCGAGGACCCCAGGTCCCCCTCCGCGTCCTCCTCCTACCGGATCTTGTTCGCCCTCCTCGCGTTCCTCCTCCTCGCCGCCACCTTCTCCGCGACCTCCGTTTGGTCCCGCCTCAATGCGCCCTACTTGTGCCAGAAGGATGGGATCACGCTGCACTGCCCTGAGACGAAGGAAGCCCCCTCCCTATGGGAGAATCCACGTGCTGCTACCACGTCCTGGAAACCCTGTGCAGAGCGCCGCAGCAATGAACCATCAGATGTCCCACCTGAGAATGAAACCTCTGGATATATTTTTATTCATGCTGAGGGTGGACTGAACCAACAGCGTATAGCTATATGTAACGCTGTTGCAATTGCTAAGATAATGAAGGCAACGCTTATTTTGCCAGTTCTAAAGCAGGATCAAATATGGAAAGACCAGACGAAGTTTGAAGATATCTTTGACGTGGATCATTTTATAAACTATTTGAAGGATGATGTGCGCATTGTCCGAGACATTCCTGACTGGTTTACAGAAAAAGATGAGCTCTTTACTAGTATAAAGCGTACTGTGAAGAACATCCCAAAGTATGCA TCTGCTCAGTTTTACATTGATAATGTACTCCCGAGGATCAAAGAGAAAAAGATAATGTCTATTAAGCCATTTGTCGACAGGTTGGGGTACGATAATGTCCCAATGGAGATTAACCGGCTACGATGCAGAGTTAATTATCATGCACTAAAGTTCCTGCCTGACATTGAAGAAATGGCTGATAAGCTGGCAGCAAGGATGAGGAACCGAACTGGCAGTGTAAATCCGTACATGGCTCTTCATCTGAGATTTGAGAAAGGAATGGTAGGCCTGTCCTTTTGTGATTTTGCTGGGACGCGGGAGGAGAAAGAGATGATGGCTGCTTATAGGCAGAAAGAATGGCCAAGGCGCTATAAGAATGGGTCTCACCTGTGGCCATTAGCTCTGCAAAAGAGAAAAGAAGGCCGTTGCCCTCTTGAGCCTGGCGAGATCGCTATCATCCTCCGGGCACTGGGTTACACAAGAGGAACACAGATATACGTTGCGTCAGGGCAAGTGTATGGCGGCAAAAACAGGATGGCTCCCCTCCGAAACATGTTCCCAAATTTGGTGACCAAGGAGGAGCTCGCCAGCGCGGCGGAGATGGCGCCGTTCCGGAAGCACGTGACGAGCCTGGCGGCGCTGGACTTCCTGGTGTGCCTGAGGTCGGACGCGTTCGTCATGACCCACGGCGGCAACTTCGCCAAGCTCATCATGGGGGCCCGCCGCTACGGGGGCCGCCACCGGCTCAAGTCCATCAAGCCCGACAAGGGCCTCATGTCCAAGTCCCTCGGCGACCCACACATGGGCTGGGCCGCCTTCTCCGACGACGTCGTCATCACCCACCAGACCAGGGCCGGGCTGCCCGAGCCCACTTTCCCCAACTACGACCTCTGGGAGAATCCTCTCACTCCCTGCATGTGTCCTACAGCCTGAACCCCCCTGATGAATCTTCAGGCTTGAAAGTTCAATTATACAGTTAGGATCACTGGCAGTATAGTGCTAGAACATTTTATGTTCTTGTTTTTTCGTTTTCGTTTTTTTTTTGCTCACGTAGTCCTATTACTAGCAGGATTTACCACCTCGATTGGTCAGCGAAATTCGAGCCCCAGCGAAGCGTACTCTTTTGCTAATTTTGAACAAACTTTAACATATTTCGAATGAATTATGACCTGAGATGAACG]
[+] EMBL CF323956             [                                                                                                                                                                                                                                                                                                                                                                                                                        TTTGGTCCCGCCTCAATGCGCCCTACTTGTGCCAGAAGGATGGGATCACGCTGCACTGCCCTGAGACGAAGGAAGCCCCCTCCCTATGGGAGAATCCACGTGCTGCTACCACGTCCTGGAAACCCTGTGCAGAGCGCCGCAGCAATGAACCATCAGATGTCCCACCTGAGAATGAAACCTCTGGATATATTTTTATTCATGCTGAGGGTGGACTGAACCAACAGCGTATAGCTATATGTAACGCTGTTGCAATTGCTAAGATAATGAAGGCAACGCTTATTTTGCCAGTTCTAAAGCAGGATCAAATATGGAAAGACCAGACGAAGTTTGAAGATATCTTTGACGTGGATCATTTTATAAACTATTTGAAGGATGATGTGCGCATTGTCCGAGACATTCCTGACTGGTTTACAGAAAAAGATGAGCTCTTTACTAGTATAAAGCGTACTGTGAAGAACATCCCAAAGTATGCANTCTGCTCAGTTTTACATTGATAATGTACTCCCGAGGATCAAAGAGAAAAAGATAATGTCTATTAAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AA751394             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCATTAGCTCTGCAAAAGAGAAAAGAAGGCCGTTGCCCTCTTGAGCCTGGCGAGATCGCTATCATCCTCCGGGCACTGGGTTACACAAGAGGAGCACAGATATACGTTGCGTCAGGGCAAGTGTATGGCGGCAAAAACAGGATGGCTCCCCTCCGAAACATGTTCCCAAATTTGGTGACCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]




>consensus_8117#0
ACACTGAACAAGTACCACTCCCACTGCCGGCGCTGCCCCCACCGGCGGCGGCAGCGGCGG
CGGCGGAGGCCATGGCTGAGCTGCGGCATTCGACGGTGGCGGCGGCCGCGGCCCGCTCCT
CCAACTCCCCCGCGAAGCGCGACTCCGACGCCTCTGCCGCCTCCTCCCCCTTCGCCTCCA
CCTCATCCGCGCGCGGCCGCGGCGGCGGCGACGACGACGACGGCAAGGATGCGCACCGCT
CCTCCCCTCTCCTCCCTCATCACCACAAGCGCCTCGGCTTGCCCTCTCCCCTCCGCTCGC
TCCTCGCCCTCGAGGACCCCAGGTCCCCCTCCGCGTCCTCCTCCTACCGGATCTTGTTCG
CCCTCCTCGCGTTCCTCCTCCTCGCCGCCACCTTCTCCGCGACCTCCGTTTGGTCCCGCC
TCAATGCGCCCTACTTGTGCCAGAAGGATGGGATCACGCTGCACTGCCCTGAGACGAAGG
AAGCCCCCTCCCTATGGGAGAATCCACGTGCTGCTACCACGTCCTGGAAACCCTGTGCAG
AGCGCCGCAGCAATGAACCATCAGATGTCCCACCTGAGAATGAAACCTCTGGATATATTT
TTATTCATGCTGAGGGTGGACTGAACCAACAGCGTATAGCTATATGTAACGCTGTTGCAA
TTGCTAAGATAATGAAGGCAACGCTTATTTTGCCAGTTCTAAAGCAGGATCAAATATGGA
AAGACCAGACGAAGTTTGAAGATATCTTTGACGTGGATCATTTTATAAACTATTTGAAGG
ATGATGTGCGCATTGTCCGAGACATTCCTGACTGGTTTACAGAAAAAGATGAGCTCTTTA
CTAGTATAAAGCGTACTGTGAAGAACATCCCAAAGTATGCATCTGCTCAGTTTTACATTG
ATAATGTACTCCCGAGGATCAAAGAGAAAAAGATAATGTCTATTAAGCCATTCGTCGACA
GGTTGGGGTACGATAATGTCCCAATGGAGATTAACCGGCTACGATGCAGAGTTAATTATC
ATGCACTAAAGTTCCTGCCTGACATTGAAGAAATGGCTGATAAGCTGGCAGCAAGGATGA
GGAACCGAACTGGCAGTGTAAATCCGTACATGGCTCTTCATCTGAGATTTGAGAAAGGAA
TGGTAGGCCTGTCCTTTTGTGATTTTGCTGGGACGCGGGAGGAGAAAGAGATGATGGCTG
CTTATAGGCAGAAAGAATGGCCAAGGCGCTATAAGAATGGGTCTCACCTGTGGCCATTAG
CTCTGCAAAAGAGAAAAGAAGGCCGTTGCCCTCTTGAGCCTGGCGAGATCGCTATCATCC
TCCGGGCACTGGGTTACACAAGAGGAACACAGATATACGTTGCGTCAGGGCAAGTGTATG
GCGGCAAAAACAGGATGGCTCCCCTCCGAAACATGTTCCCAAATTTGGTGACCAAGGAGG
AGCTCGCCAGCGCGGCGGAGATGGCGCCGTTCCGGAAGCACGTGACGAGCCTGGCGGCGC
TGGACTTCCTGGTGTGCCTGAGGTCGGACGCGTTCGTCATGACCCACGGCGGCAACTTCG
CCAAGCTCATCATGGGGGCCCGCCGCTACGGGGGCCGCCACCGGCTCAAGTCCATCAAGC
CCGACAAGGGCCTCATGTCCAAGTCCCTCGGCGACCCACACATGGGCTGGGCCGCCTTCT
CCGACGACGTCGTCATCACCCACCAGACCAGGGCCGGGCTGCCCGAGCCCACTTTCCCCA
ACTACGACCTCTGGGAGAATCCTCTCACTCCCTGCATGTGTCCTACAGCCTGAACCCCCC
TGATGAATCTTCAGGCTTGAAAGTTCAATTATACAGTTAGGATCACTGGCAGTATAGTGC
TAGAACATTTTATGTTCTTGTTTTTTCGTTTTCGTTTTTTTTTTGCTCACGTAGTCCTAT
TACTAGCAGGATTTACCACCTCGATTGGTCAGCGAAATTCGAGCCCCAGCGAAGCGTACT
CTTTTGCTAATTTTGAACAAACTTTAACATATTTCGAATGAATTATGACCTGAGATGAAC
G

consensusID : consensus_8117#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 875
fasta sequence

                              [CCCGGGACTGCAGGGCGTCGCCAGCTGCTGGCGCAGATGTGCGCCGTTCCCCGAAGACACGTGACGAGCCTGGCGGCGCTGGACTTACTGACGTGCCTGATGTCCGACGCGTGCTTCATGACCCACCGCGGCAACTTCGCCAAGCTCATCATGGGGGCCCGCCGCTACGGGGGCCGCCACCGGCTCAAGTCCATCAAGCCCGACAAGGGCCTCATGTCCAAGTCCCTCGGCGACCCACACATGGGCTGGGCCGTCTTCTCCGACGACATCGTCATCACCCACCAGACCAGAGCCGGGCTGCCCTGACCCACTTTTCCCAACTACGACCTCTGGGAGAATCCTCTCACTCCCTGCCTGTGTCCTACAGCCTGAACCCCTTTGATGAATCTTCACGCTTGAAAGCCCAATTATACATTTATGATCACTGGCAGTATAATTGCTATAACATTTTATGTTCTTGCTCTTTCTTTNTNNNCNTTCCNTTTGTTTTATGTTCCCCCCCCCTTACTACTACCTGGACTCACCCCCGCGCTTAAATCACCAAAACTTGGTCCCTTTGTTCCCCGCCTTCTTTTCTCCCCTTTTCCTCAATCCGTTCCTTTTCCTAATCACTCGTGCCCGCGCCTTCTTACGCCTTTTTTACNTTCCTGAGTATCGGCTTTCCTCTCGTTTCATATTAAATCTCCGCACCGCCCCGCCCTTGCATGGGCTGTTATGGAGGACAAACCTGCCCCTATTCCCCCGATTCAATTCACCACATTCCGCAACAATGTGTATGCGACTTAGTTATACTCTTTACTTTATTTGTGANACCCTCTCCCCCCTTTTTTCTCTCCACATCCCCCTCTTCTTCATAGCTCACTTCCAATCCCCAC]

[+] EMBL CA756978             [CCCGGGACTGCAGGGCGTCGCCAGCTGCTGGCGCAGATGTGCGCCGTTCCCCGAAGACACGTGACGAGCCTGGCGGCGCTGGACTTACTGACGTGCCTGATGTCCGACGCGTGCTTCATGACCCACCGCGGCAACTTCGCCAAGCTCATCATGGGGGCCCGCCGCTACGGGGGCCGCCACCGGCTCAAGTCCATCAAGCCCGACAAGGGCCTCATGTCCAAGTCCCTCGGCGACCCACACATGGGCTGGGCCGTCTTCTCCGACGACATCGTCATCACCCACCAGACCAGAGCCGGGCTGCCCTGACCCACTTTTCCCAACTACGACCTCTGGGAGAATCCTCTCACTCCCTGCCTGTGTCCTACAGCCTGAACCCCTTTGATGAATCTTCACGCTTGAAAGCCCAATTATACATTTATGATCACTGGCAGTATAATTGCTATAACATTTTATGTTCTTGCTCTTTCTTTNTNNNCNTTCCNTTTGTTTTATGTTCCCCCCCCCTTACTACTACCTGGACTCACCCCCGCGCTTAAATCACCAAAACTTGGTCCCTTTGTTCCCCGCCTTCTTTTCTCCCCTTTTCCTCAATCCGTTCCTTTTCCTAATCACTCGTGCCCGCGCCTTCTTACGCCTTTTTTACNTTCCTGAGTATCGGCTTTCCTCTCGTTTCATATTAAATCTCCGCACCGCCCCGCCCTTGCATGGGCTGTTATGGAGGACAAACCTGCCCCTATTCCCCCGATTCAATTCACCACATTCCGCAACAATGTGTATGCGACTTAGTTATACTCTTTACTTTATTTGTGANACCCTCTCCCCCCTTTTTTCTCTCCACATCCCCCTCTTCTTCATAGCTCACTTCCAATCCCCAC]




>consensus_8117#1
CCCGGGACTGCAGGGCGTCGCCAGCTGCTGGCGCAGATGTGCGCCGTTCCCCGAAGACAC
GTGACGAGCCTGGCGGCGCTGGACTTACTGACGTGCCTGATGTCCGACGCGTGCTTCATG
ACCCACCGCGGCAACTTCGCCAAGCTCATCATGGGGGCCCGCCGCTACGGGGGCCGCCAC
CGGCTCAAGTCCATCAAGCCCGACAAGGGCCTCATGTCCAAGTCCCTCGGCGACCCACAC
ATGGGCTGGGCCGTCTTCTCCGACGACATCGTCATCACCCACCAGACCAGAGCCGGGCTG
CCCTGACCCACTTTTCCCAACTACGACCTCTGGGAGAATCCTCTCACTCCCTGCCTGTGT
CCTACAGCCTGAACCCCTTTGATGAATCTTCACGCTTGAAAGCCCAATTATACATTTATG
ATCACTGGCAGTATAATTGCTATAACATTTTATGTTCTTGCTCTTTCTTTNTNNNCNTTC
CNTTTGTTTTATGTTCCCCCCCCCTTACTACTACCTGGACTCACCCCCGCGCTTAAATCA
CCAAAACTTGGTCCCTTTGTTCCCCGCCTTCTTTTCTCCCCTTTTCCTCAATCCGTTCCT
TTTCCTAATCACTCGTGCCCGCGCCTTCTTACGCCTTTTTTACNTTCCTGAGTATCGGCT
TTCCTCTCGTTTCATATTAAATCTCCGCACCGCCCCGCCCTTGCATGGGCTGTTATGGAG
GACAAACCTGCCCCTATTCCCCCGATTCAATTCACCACATTCCGCAACAATGTGTATGCG
ACTTAGTTATACTCTTTACTTTATTTGTGANACCCTCTCCCCCCTTTTTTCTCTCCACAT
CCCCCTCTTCTTCATAGCTCACTTCCAATCCCCAC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8117#0      ACACTGAACAAGTACCACTCCCACTGCCGGCGCTGCCCCCACCGGCGGCGGCAGCGGCGG 60
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      CGGCGGAGGCCATGGCTGAGCTGCGGCATTCGACGGTGGCGGCGGCCGCGGCCCGCTCCT 120
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      CCAACTCCCCCGCGAAGCGCGACTCCGACGCCTCTGCCGCCTCCTCCCCCTTCGCCTCCA 180
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      CCTCATCCGCGCGCGGCCGCGGCGGCGGCGACGACGACGACGGCAAGGATGCGCACCGCT 240
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      CCTCCCCTCTCCTCCCTCATCACCACAAGCGCCTCGGCTTGCCCTCTCCCCTCCGCTCGC 300
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      TCCTCGCCCTCGAGGACCCCAGGTCCCCCTCCGCGTCCTCCTCCTACCGGATCTTGTTCG 360
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      CCCTCCTCGCGTTCCTCCTCCTCGCCGCCACCTTCTCCGCGACCTCCGTTTGGTCCCGCC 420
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      TCAATGCGCCCTACTTGTGCCAGAAGGATGGGATCACGCTGCACTGCCCTGAGACGAAGG 480
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      AAGCCCCCTCCCTATGGGAGAATCCACGTGCTGCTACCACGTCCTGGAAACCCTGTGCAG 540
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      AGCGCCGCAGCAATGAACCATCAGATGTCCCACCTGAGAATGAAACCTCTGGATATATTT 600
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      TTATTCATGCTGAGGGTGGACTGAACCAACAGCGTATAGCTATATGTAACGCTGTTGCAA 660
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      TTGCTAAGATAATGAAGGCAACGCTTATTTTGCCAGTTCTAAAGCAGGATCAAATATGGA 720
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      AAGACCAGACGAAGTTTGAAGATATCTTTGACGTGGATCATTTTATAAACTATTTGAAGG 780
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      ATGATGTGCGCATTGTCCGAGACATTCCTGACTGGTTTACAGAAAAAGATGAGCTCTTTA 840
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      CTAGTATAAAGCGTACTGTGAAGAACATCCCAAAGTATGCATCTGCTCAGTTTTACATTG 900
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      ATAATGTACTCCCGAGGATCAAAGAGAAAAAGATAATGTCTATTAAGCCATTCGTCGACA 960
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      GGTTGGGGTACGATAATGTCCCAATGGAGATTAACCGGCTACGATGCAGAGTTAATTATC 1020
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      ATGCACTAAAGTTCCTGCCTGACATTGAAGAAATGGCTGATAAGCTGGCAGCAAGGATGA 1080
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      GGAACCGAACTGGCAGTGTAAATCCGTACATGGCTCTTCATCTGAGATTTGAGAAAGGAA 1140
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      TGGTAGGCCTGTCCTTTTGTGATTTTGCTGGGACGCGGGAGGAGAAAGAGATGATGGCTG 1200
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      CTTATAGGCAGAAAGAATGGCCAAGGCGCTATAAGAATGGGTCTCACCTGTGGCCATTAG 1260
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      CTCTGCAAAAGAGAAAAGAAGGCCGTTGCCCTCTTGAGCCTGGCGAGATCGCTATCATCC 1320
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      TCCGGGCACTGGGTTACACAAGAGGAACACAGATATACGTTGCGTCAGGGCAAGTGTATG 1380
consensus_8117#1      ------------------------------------------------------------
                                                                                  

consensus_8117#0      GCGGCAAAAACAGGATGGCTCCCCTCCGAAACATGTTCCCAAATTTGGTGACCAAGGAGG 1440
consensus_8117#1      --------------------------------------------CCCGGGACT--GCAGG 14
                                                                     * ***   * ***

consensus_8117#0      AGCTCGCCAGCG--CGGCGGAGATG-GCGCCGTTCC--GGAAGCACGTGACGAGCCTGGC 1495
consensus_8117#1      GCGTCGCCAGCTGCTGGCGCAGATGTGCGCCGTTCCCCGAAGACACGTGACGAGCCTGGC 74
                         ********    **** ***** **********  * *  *****************

consensus_8117#0      GGCGCTGGACTTCCTGGTGTGCCTGAGGTCGGACGCGTTCGTCATGACCCACGGCGGCAA 1555
consensus_8117#1      GGCGCTGGACTTACTGACGTGCCTGATGTCCGACGCGTGCTTCATGACCCACCGCGGCAA 134
                      ************ ***  ******** *** ******* * *********** *******

consensus_8117#0      CTTCGCCAAGCTCATCATGGGGGCCCGCCGCTACGGGGGCCGCCACCGGCTCAAGTCCAT 1615
consensus_8117#1      CTTCGCCAAGCTCATCATGGGGGCCCGCCGCTACGGGGGCCGCCACCGGCTCAAGTCCAT 194
                      ************************************************************

consensus_8117#0      CAAGCCCGACAAGGGCCTCATGTCCAAGTCCCTCGGCGACCCACACATGGGCTGGGCCGC 1675
consensus_8117#1      CAAGCCCGACAAGGGCCTCATGTCCAAGTCCCTCGGCGACCCACACATGGGCTGGGCCGT 254
                      *********************************************************** 

consensus_8117#0      CTTCTCCGACGACGTCGTCATCACCCACCAGACCAGGGCCGGGCTGCCCGAGCCCACTTT 1735
consensus_8117#1      CTTCTCCGACGACATCGTCATCACCCACCAGACCAGAGCCGGGCTGCCCTGACCCACTTT 314
                      ************* ********************** ************   ********

consensus_8117#0      CCCCAACTACGACCTCTGGGAGAATCCTCTCACTCCCTGCATGTGTCCTACAGCCTGAAC 1795
consensus_8117#1      TCCCAACTACGACCTCTGGGAGAATCCTCTCACTCCCTGCCTGTGTCCTACAGCCTGAAC 374
                       *************************************** *******************

consensus_8117#0      CCCCCTGATGAATCTTCAGGCTTGAAAGTTCAATTATACAGTTAGGATCACTGGCAGTAT 1855
consensus_8117#1      CCCTTTGATGAATCTTCACGCTTGAAAGCCCAATTATACATTTATGATCACTGGCAGTAT 434
                      ***  ************* *********  ********** *** ***************

consensus_8117#0      AGT-GCTAGAACATTTTATGTTCTTGTTTTTTCGTTTTCGTTTTTTTTTTGCTCACGTAG 1914
consensus_8117#1      AATTGCTATAACATTTTATGTTCTTGCTCTTTCTTTNTNNNCNTTCCNTTTGTTTTATGT 494
                      * * **** ***************** * **** ** *     **   **  *    *  

consensus_8117#0      TCC--------TATTACTAGCAGGATTTACCACCTCGATTGG-TCAGCGAAATTCGAGCC 1965
consensus_8117#1      TCCCCCCCCCTTACTACTACCTGGACTCACCCCCGCGCTTAAATCACCAAAACTTGGTCC 554
                      ***        ** ***** * *** * *** ** ** **   *** * *** * *  **

consensus_8117#0      CCA-GCGAAGCGTACTCTTTTGCTAATTTTGAACAAACTTTAACATATTTCGAATGAATT 2024
consensus_8117#1      CTTTGTTCCCCGCCTTCTTTTCTCCCCTTTTCCTCAATCCGTTCCTTTTCCTAATCACTC 614
                      *   *     **   ******      ***     **      * * ** * *** * * 

consensus_8117#0      ATGACCTGAGATGAACG------------------------------------------- 2041
consensus_8117#1      GTGCCCGCGCCTTCTTACGCCTTTTTTACNTTCCTGAGTATCGGCTTTCCTCTCGTTTCA 674
                       ** **     *                                                

consensus_8117#0      ------------------------------------------------------------
consensus_8117#1      TATTAAATCTCCGCACCGCCCCGCCCTTGCATGGGCTGTTATGGAGGACAAACCTGCCCC 734
                                                                                  

consensus_8117#0      ------------------------------------------------------------
consensus_8117#1      TATTCCCCCGATTCAATTCACCACATTCCGCAACAATGTGTATGCGACTTAGTTATACTC 794
                                                                                  

consensus_8117#0      ------------------------------------------------------------
consensus_8117#1      TTTACTTTATTTGTGANACCCTCTCCCCCCTTTTTTCTCTCCACATCCCCCTCTTCTTCA 854
                                                                                  

consensus_8117#0      ---------------------
consensus_8117#1      TAGCTCACTTCCAATCCCCAC 875