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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8171#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1481 fasta sequence
[CCGCAAACACGTCGATGGTTCGACCGCAACCGGGTGACCCCTGCTCCGACCAGGCCACCCCCGTTCTCCTCCCCGCCGCCGCCACCGGCGCCTCCCGCTCGTCCCCGGCCGGCGAGTCGCGTAGGAGGGAAGCGCCACCGGCGGCGGCCGCGGCGAGATGAGCGGCGGCAGCGGCGGCGGCGCCGCGAGCGCGGTGTTCTACGCGGAGAAGTACCACCCGATCCAGGCGGGCAGCATCGACGGCACCGACGTCGCCCCCCACGACAACGCCGTCCTCCGCGCCCTCCTCTGCTCCACCGCCGGCCTCTATGATCCGTTCGGGGACCCCAAGGCCACCGGCGACCCCTACTGCACGGTGTTCGTCGGGAGACTCTCCCGCTACACCGACGACGAGACACTCCGGAAGGAGATGAGCAGATATGGGAGGGTGAAGAGCATGCGGCTGGTGCGGGATATTGTTACTGGTGCTTCTCGTGGCTACGCATTTGTTGAGTATGAAACTGACAGGGAGATGCGCCGTGCCTATGAGGATGCACACCATTCCATTATTGATGGCAGTGAAGTGCTTGTAGATTACTACAGGCAACAACTTATGCCTGGATGGATACCGAGGAGATCAGGAGGAGGGCTTGGAGGGAAGAAAGAATCTGGCCAGCTTCGATTTGGAGGTCGAGAGAGGCCATTTCGTGCTCCC-TTGAGGCCAATTCCGTATGATGAACTGAAAAGGCTTGGGATCCCACCACCACCTGAAGGGCGATACATGACACGTTATCAGGTTCCCCCACCACCAAGACGAAAAAGCAGTGATATCTACAGGGAAGAGTCACCTCCCAAGAGAAGATCCAAAGACAGGGTTGATAGCAGTCACTACAGAAGATATTGTAGCCCAACCCAAGACGACGACAGCACGGTCAGCACCCATAGGCGGAAAGGTAGCCATGACCGGCGAGAAGAAACCGAGAGGAGGACAAGAGCATATATCAGCAGAGAGGCCGGCAGCTACAGTAAGCGGAGCCCAACCGAAGACGATGGTGATCGTCGTAAGAGGAGAAGAAGCCGAGAGCCTGGAGAATTATCTCCATACAAGGAGGATGATGATAACAGCAAAAGAGGAAGAAGTTCAGTGGAGCCAGGCTTCAGCCCTTATCAGTCTCATCACCACAGGCATCACAGGGAGCGTCATGACAGCAGCAGCCATTCTCGCCACGGTGAACGTCGGCATCAAGACGACCGTGGAAACCACTCCAGGAACAGGAGATCAGAGAGCCGGGACTACAGCCACTAGAGGTGTCGAGTCCATGGTGGGTTCCTAGTGTTTTAACCTGAATCCCTGGCTGCCTGTTCGCTGCTTCAACTCATGTATATGATCTAGTTTTCTCAGGCGTCCTTGCCTTGGGTTGCCTGTGTAGTGAGGG-CTACTAAACCTGAAGTTTCGACTTTGGAATACATGAATTAATAGAATTCATGATTTAGTTCAAAAA]
[+] EMBL AK071999 [CCGCAAACACGTCGATGGTTCGACCGCAACCGGGTGACCCCTGCTCCGACCAGGCCACCCCCGTTCTCCTCCCCGCCGCCGCCACCGGCGCCTCCCGCTCGTCCCCGGCCGGCGAGTCGCGTAGGAGGGAAGCGCCACCGGCGGCGGCCGCGGCGAGATGAGCGGCGGCAGCGGCGGCGGCGCCGCGAGCGCGGTGTTCTACGCGGAGAAGTACCACCCGATCCAGGCGGGCAGCATCGACGGCACCGACGTCGCCCCCCACGACAACGCCGTCCTCCGCGCCCTCCTCTGCTCCACCGCCGGCCTCTATGATCCGTTCGGGGACCCCAAGGCCACCGGCGACCCCTACTGCACGGTGTTCGTCGGGAGACTCTCCCGCTACACCGACGACGAGACACTCCGGAAGGAGATGAGCAGATATGGGAGGGTGAAGAGCATGCGGCTGGTGCGGGATATTGTTACTGGTGCTTCTCGTGGCTACGCATTTGTTGAGTATGAAACTGACAGGGAGATGCGCCGTGCCTATGAGGATGCACACCATTCCATTATTGATGGCAGTGAAGTGCTTGTAGATTACTACAGGCAACAACTTATGCCTGGATGGATACCGAGGAGATCAGGAGGAGGGCTTGGAGGGAAGAAAGAATCTGGCCAGCTTCGATTTGGAGGTCGAGAGAGGCCATTTCGTGCTCCC TTGAGGCCAATTCCGTATGATGAACTGAAAAGGCTTGGGATCCCACCACCACCTGAAGGGCGATACATGACACGTTATCAGGTTCCCCCACCACCAAGACGAAAAAGCAGTGATATCTACAGGGAAGAGTCACCTCCCAAGAGAAGATCCAAAGACAGGGTTGATAGCAGTCACTACAGAAGATATTGTAGCCCAACCCAAGACGACGACAGCACGGTCAACACCCATAGGCGGAAAGGTAGCCATGACCGGCGAGAAGAAACCGAGAGGAGGACAAGAGCATATATCAGCAGAGAGGCCGGCAGCTACAGTAAGCGGAGCCCAACCGAAGACGATGGTGATCGTCGTAAGAGGAGAAGAAGCCGAGAGCCTGGAGAATTATCTCCATACAAGGAGGATGATGATAACAGCAAAAGAGGAAGAAGTTCAGTGGAGCCAGGCTTCAGCCCTTATCAGTCTCATCACCACAGGCATCACAGGGAGCGTCATGACAGCAGCAGCCATTCTCGCCACGGTGAACGTCGGCATCAAGACGACCGTGGAAACCACTCCAGGAACAGGAGATCAGAGAGCCGGGACTACAGCCACTAGAGGTGTCGAGTCCATGGTGGGTTCCTAGTGTTTTAACCTGAATCCCTGGCTGCCTGTTCGCTGCTTCAACTCATGTATATGATCTAGTTTTCTCAGGCGTCCTTGCCTTGGGTTGCCTGTGTAGTGAGGG CTACTAAACCTGAAGTTTCGACTTTGGAATAC ]
[+] EMBL AK099033 [ CCCGTTCTCCTCCCCGCCGCCGCCACCGGCGCCTCCCGCTCGTCCCCGGCCGGCGAGTCGCGTAGGAGGGAAGCGCCACCGGCGGCGGCCGCGGCGAGATGAGCGGCGGCAGCGGCGGCGGCGCCGCGAGCGCGGTGTTCTACGCGGAGAAGTACCACCCGATCCAGGCGGGCAGCATCGACGGCACCGACGTCGCCCCCCACGACAACGCCGTCCTCCGCGCCCTCCTCTGCTCCACCGCCGGCCTCTATGATCCGTTCGGGGACCCCAAGGCCACCGGCGACCCCTACTGCACGGTGTTCGTCGGGAGACTCTCCCGCTACACCGACGACGAGACACTCCGGAAGGAGATGAGCAGATATGGGAGGGTGAAGAGCATGCGGCTGGTGCGGGATATTGTTACTGGTGCTTCTCGTGGCTACGCATTTGTTGAGTATGAAACTGACAGGGAGATGCGCCGTGCCTATGAGGATGCACACCATTCCATTATTGATGGCAGTGAAGTGCTTGTAGATTACTACAGGCAACAACTTATGCCTGGATGGATACCGAGGAGATCAGGAGGAGGGCTTGGAGGGAAGAAAGAATCTGGCCAGCTTCGATTTGGAGGTCGAGAGAGGCCATTTCGTGCTCCC TTGAGGCCAATTCCGTATGATGAACTGAAAAGGCTTGGGATCCCACCACCACCTGAAGGGCGATACATGACACGTTATCAGGTTCCCCCACCACCAAGACGAAAAAGCAGTGATATCTACAGGGAAGAGTCACCTCCCAAGAGAAGATCCAAAGACAGGGTTGATAGCAGTCACTACAGAAGATATTGTAGCCCAACCCAAGACGACGACAGCACGGTCAGCACCCATAGGCGGAAAGGTAGCCATGACCGGCGAGAAGAAACCGAGAGGAGGACAAGAGCATATATCAGCAGAGAGGCCGGCAGCTACAGTAAGCGGAGCCCAACCGAAGACGATGGTGATCGTCGTAAGAGGAGAAGAAGCCGAGAGCCTGGAGAATTATCTCCATACAAGGAGGATGATGATAACAGCAAAAGAGGAAGAAGTTCAGTGGAGCCAGGCTTCAGCCCTTATCAGTCTCATCACCACAGGCATCACAGGGAGCGTCATGACAGCAGCAGCCATTCTCGCCACGGTGAACGTCGGCATCAAGACGACCGTGGAAACCACTCCAGGAACAGGAGATCAGAGAGCCGGGACTACAGCCACTAGAGGTGTCGAGTCCATGGTGGGTTCCTAGTGTTTTAACCTGAATCCCTGGCTGCCTGTTCGCTGCTTCAACTAATGTATATGATCTAGTTTTCTCAGGCGTCCTTGCCTTGGGTTGCCTGTGTAGTGAGGG CTACTAAACCTGAAGTTTCGACTTTGGAATACATGAATTAATAGAATTC ]
[+] EMBL C97840 [ TCAGGAGGAGGGCTTGGAGGGAAGAAAGAATCTGGCCAGCTTCGATTTGGAGGTCGAGAGAGGCCATTTCGTGCTCCC TTGAGGCCAATTCCGTATGATGAACTGAAAAGGCTTGGGATCCCACCACCACCTGAAGGGCGATACATGACACGTTATCAGGTTCCCCCACCACCAAGACGAAAAAGCAGTGATATCTACAGGGAAGAGTCACCTCCCAAGAGAAGATCCAAAGACAGGGTTGATAGCAGTCACTACAGAAGATATTGTAGCCCAACCCAAGACGACGACAGCACGGTCAGCACCCATAGGCGGAAAGGTAGn ]
[+] EMBL AU069629 [ TCAGGAGGAGGGCTTGGAGGGAAGAAAGANTCTGGCCAGCTTCGATTTGGAGGTCGAGAGAGGCCATTTCGTGCTCCCTTTGAGGCCAATTCCGTATGATGAACTGAAAAGGCTTGGGATCCCACCACCACCTGNAGGGNGATACATGACACGTTATCAGGTTCCCCCACCACCATGNCGAAAAAGCAGTNNTATCTACAGGGATGTGT ]
[+] EMBL AU172384 [ GTAAGAGGAGAAGAAGCCGAGAGCCTGGAGAATTATCTCCATACAAGGAGGATGATGATAACAGCAAAAGAGGAAGAAGTTCAGTGGAGCCAGGCTTCAGCCCTTATCAGTCTCATCACCACAGGCATCACAGGGAGCGTCATGACAGCAGCAGCCATTCTCGCCACGGTGAACGTCGGCATCAAGACGACCGTGGAAACCACTCCAGGAACAGGAGATCAGAGAGCCGGGACTACAGCCACTAGAGGTGTCGAGTCCATGGTGGGTTCCTAGTGTTTTAACCTGAATCCCTGGCTGCCTGTTCGCTGCTTCAACTCATGTATATGATCTAGTTTTTTCAGGCGTCCTTGCCTTGGGTTGCCTGTGTAGTGAGGGCCTACTAAACCTGAAGTTTCGACTTTGGAATACATGAATTAATAGAATTCATGATTTAGTTCAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||