cluster # 8297

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Oryza sativa
cluster # 8297 cluster # 8297 Sequences # 5 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8297#0 length = 2978 sequences # 4

consensus_8297#1 length = 614 sequences # 1

consensusID : consensus_8297#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2978
fasta sequence

                              [CCCCTCGAGCTCTGTCTTTATCTCTCTTCCTCAAGACCAGCTGCCGCCACCATCGGCCGATCTCCCTCACCGGAGCACCACTAACCAAATCCTCTCACCACCAGCCTTGCCTCACTCCGGCGAACCCATTTTTCCAATTTTCCCCTTCTTTTTCGTCCCATGTCAAGCCCCACCGGAGCTCTCTCTCTCTCTCTCTCTCTTGCCGGTTCACACTTCACAGTCTTGCTCTCGCCGTTCCGACCATTCCCTTAACTCCCTCTGCCGGCCACTGCCCACCCTAGGTGCTCCGCTCCCTGAAACACCACCGGCCGCCGGCGTCGCCGCCTCCCAGCCACCAGAGCCCTGGCGCCCCTTCTTCCCCCTCCTCTCAGTTGCTCGGCTGGAAGAAGAAAGAAGAAAGAAGAAGACGAGAGAAAGAAGGCGAGCAAGCTAGGAATCGGACGTCCGTTATTTCTCCAAATATCGGACGCCGCTCACACTCTGCCTATCTATTTGCATGGCATACTGCATGTGTGCATGCCTGCAGCGAGAAGTAGCGGTGCAGCGAGTGGTAGGGGTGACAGAGGTTTGGCACAGCATCACATATATGTTTGACTCTACATTCTCTCTCTCTTCTTTTTGTTTAATCAAATTTTAAACAAAATTTTCAACTAAAATATGTATCTAATCTATAATTTGATTATACCATTTTATTTATTATAATTAAATCTTTATAAGAAGATCTTACACGAATATATTTTGATTAAGAAAATATATGTGTTCTAGAAAAATCAACCTTTTGTTGCACCATTCATAGATGCGAATGTTTTAGCCCACTTTATAAAATGTTCCAGTGATATGTAACTTATAAAATTTACAAACGGTAACAAGAACCTATGTTACATGAAACATTATGTCCCAAATAGTGAAACATAAAAAAAAGTATGATACAGTATATTTGTAAACATTGATTTTGTTAAAATTTATATCACTATTGAAACGTCCACTTGTAATTTTTAAAACATAAAAAATTATTTGCTGAAACATATAGAAATATAGCGTGCAACAATAACTATATAAAATTTACAGACTGCAACAATAACCACCATTACATGAAACATTAGATCCCAACTAGAGAAACATAAAAAATATGATACAACATATTTGAAAAT-AATTTA-TTTTGTTGAAATTTTTAAAAAATAAAAAATATATTTACTGAAACATATAAAAAGACCACGTGCAACATTATAAATGAATCAGTGAAACAACAATAAATACTTATTGAAACATTGGAATAAAAAAATCATCGGAACATAGTCATATGAGATCTCATTATAAAGAGTTAATTGTCACAAATCTAATGGTATAATTAGTTCATAGTTCGGATAAATAGTTCAACAGAAAAGATCATTTAAATTTTAAATTTTAGATCTATCCGACTTGCATGCATGCTGGCTGCATGCACCTACCACTC-TGTTGGGGTGTCCGATTTTTTTTCCTTGCCCGGACATATGATGATAAGCATTTCCGGAAAGAAGGAGAGAAAAAGAAAAGGGAAAGAAAGTTACTGACAGGTGGGCCCCAGCACACTACTATTTCACAATTTCTAGATTTAATTCAGATCCTAATCTTTAGAAGCCCATATCTTTTGAAATATAAAACCAATTCTAGTGAAACTTGGACCAAAATTCTTCTAAAATCTTTCTCTATCTTTTGAGGCTATTTTTACTATTTTCTCATTTTATTTTATTTTTTCCTATTTTTGGACTTCATTCGAATCCCTTTTGAATTTGAATTTTATATATTTAACCCTAGGTCTTGAGGATTTTTCTGACACACTAGATAATATTAGTCAATCTTAGGACATCGAGCAAGGCAAGTTATTGTTCACCTCTTGCTCATTTAAGCCTATATTTTATAAATTATTTATTTATAGCCCTTCTATTCAAATATTCTCTTTTATATATGCATAACTCAACCATAGAAACCCAGATAATTTAGCTTTGCTTATTTTGCTTACAATCTGATTAAAATGCTTTATACTTAGATTGAGACAGTACGTAAGAATGGGTTGATTTTCGGGTGGCTAGTACTGTCTCAGTCGCCATAAATGTTACCAAGTACTTGTGACAAACGAACGTGTATGACCGCAGTTCTCGAATTGGTACAGACCTAGCTATTATGTTAATTAACAAAGTGGTACCTCTGTATAGTGGTTCTTGTTTTTAAGTCCACGAGCATGAGGCAAGTTTATGCCGAGGAGGGAAAATGTTATATTTATCGAGCAAGGGTAAATATATTGCGCGCTATGCGAGCAAGGGAAAATTTTATTTAAACCCTGATTGCGATGACATAGTGTCATACAATCAATCCTCTCTAAAGACCCCGGAAACACCAGAACTCTTCACATTGCTGATAACGTACGTTCAAAGCACATGGGGACTAGAGTTCATGGAATAGGTGCCACTGTTGTTAGTAACCTAATGACTTGGTCATAACTAAGCTAATGTTTATTGGCAAGTCATGGATTGCGGGTAAAGCGTATATCTACTGCAATAGAATGATTATGAAACTATTTGAATAGCCGTGCTCACGGATTTGAGCATCGGGACTCATATGGTACTTTGGTTAGAAACTTGAATAATTTATTTTATAAATTCTTGCTTTAATTGACCAGATTGTCTACTATTGCTTTGTGCAAAAGAACCCCTCCATACTTATACCAATGCATGACATGTTTCCACAATAACTTGCTGAGTATTGCAAATACTCACCCTTGCTCCTATTACTCCTTTTTTCAGATTTGGGTCAAGAGAAGGACCCCTATAACTATTACTATGATGACCCCGATAACCTAGAAAATCCCTAGAGTTTATTCATTCCTAGTTAAAATATATTAAAGTTTCCGTTGTATAACATTAGGTCTAAGTATAGTTAAGTGAGTACCTACTCTTGTAAAACCCATAGTATTGTAAAATTTAACATATGCAATGAAAATT]

[+] EMBL AK073072             [CCCCTCGAGCTCTGTCTTTATCTCTCTTCCTCAAGACCAGCTGCCGCCACCATCGGCCGATCTCCCTCACCGGAGCACCACTAACCAAATCCTCTCACCACCAGCCTTGCCTCACTCCGGCGAACCCATTTTTCCAATTTTCCCCTTCTTTTTCGTCCCATGTCAAGCCCCACCGGAGCTCTCTCTCTCTCTCTCTCTCTTGCCGGTTCACACTTCACAGTCTTGCTCTCGCCGTTCCGACCATTCCCTTAACTCCCTCTGCCGGCCACTGCCCACCCTAGGTGCTCCGCTCCCTGAAACACCACCGGCCGCCGGCGTCGCCGCCTCCCAGCCACCAGAGCCCTGGCGCCCCTTCTTCCCCCTCCTCTCAGTTGCTCGGCTGGAAGAAGAAAGAAGAAAGAAGAAGACGAGAGAAAGAAGGCGAGCAAGCTAGGAATCGGACGTCCGTTATTTCTCCAAATATCGGACGCCGCTCACACTCTGCCTATCTATTTGCATGGCATACTGCATGTGTGCATGCCTGCAGCGAGAAGTAGCGGTGCAGCGAGTGGTAGGGGTGACAGAGGTTTGGCACAGCATCACATATATGTTTGACTCTACATTCTCTCTCTCTTCTTTTTGTTTAATCAAATTTTAAACAAAATTTTCAACTAAAATATGTATCTAATCTATAATTTGATTATACCATTTTATTTATTATAATTAAATCTTTATAAGAAGATCTTACACGAATATATTTTGATTAAGAAAATATATGTGTTCTAGAAAAATCAACCTTTTGTTGCACCATTCATAGATGCGAATGTTTTAGCCCACTTTATAAAATGTTCCAGTGATATGTAACTTATAAAATTTACAAACGGTAACAAGAACCTATGTTACATGAAACATTATGTCCCAAATAGTGAAACATAAAAAAAAGTATGATACAGTATATTTGTAAACATTGATTTTGTTAAAATTTATATCACTATTGAAACGTCCACTTGTAATTTTTAAAACATAAAAAATTATTTGCTGAAACATATAGAAATATAGCGTGCAACAATAACTATATAAAATTTACAGACTGCAACAATAACCACCATTACATGAAACATTAGATCCCAACTAGAGAAACATAAAAAATATGATACAACATATTTGAAAAT AATTTA TTTTGTTGAAATTTTTAAAAAATAAAAAATATATTTACTGAAACATATAAAAAGACCACGTGCAACATTATAAATGAATCAGTGAAACAACAATAAATACTTATTGAAACATTGGAATAAAAAAATCATCGGAACATAGTCATATGAGATCTCATTATAAAGAGTTAATTGTCACAAATCTAATGGTATAATTAGTTCATAGTTCGGATAAATAGTTCAACAGAAAAGATCATTTAAATTTTAAATTTTAGATCTATCCGACTTGCATGCATGCTGGCTGCATGCACCTACCACTC TGTTGGGGTGTCCGATTTTTTTTCCTTGCCCGGACATATGATGATAAGCATTTCCGGAAAGAAGGAGAGAAAAAGAAAAGGGAAAGAAAGTTACTGACAGGTGGGCCCCAGCACACTACTATTTCACAATTTCTAGATTTAATTCAGATCCTAATCTTTAGAAGCCCATATCTTTTGAAATATAAAACCAATTCTAGTGAAACTTGGACCAAAATTCTTCTAAAATCTTTCTCTATCTTTTGAGGCTATTTTTACTATTTTCTCATTTTATTTTATTTTTTCCTATTTTTGGACTTCATTCGAATCCCTTTTGAATTTGAATTTTATATATTTAACCCTAGGTCTTGAGGATTTTTCTGACACACTAGATAATATTAGTCAATCTTAGGACATCGAGCAAGGCAAGTTATTGTTCACCTCTTGCTCATTTAAGCCTATATTTTATAAATTATTTATTTATAGCCCTTCTATTCAAATATTCTCTTTTATATATGCATAACTCAACCATAGAAACCCAGATAATTTAGCTTTGCTTATTTTGCTTACAATCTGATTAAAATGCTTTATACTTAGATTGAGACAGTACGTAAGAATGGGTTGATTTTCGGGTGGCTAGTACTGTCTCAGTCGCCATAAATGTTACCAAGTACTTGTGACAAACGAACGTGTATGACCGCAGTTCTCGAATTGGTACAGACCTAGCTATTATGTTAATTAACAAAGTGGTACCTCTGTATAGTGGTTCTTGTTTTTAAGTCCACGAGCATGAGGCAAGTTTATGCCGAGGAGGGAAAATGTTATATTTATCGAGCAAGGGTAAATATATTGCGCGCTATGCGAGCAAGGGAAAATTTTATTTAAACCCTGATTGCGATGACATAGTGTCATACAATCAATCCTCTCTAAAGACCCCGGAAACACCAGAACTCTTCACATTGCTGATAACGTACGTTCAAAGCACATGGGGACTAGAGTTCATGGAATAGGTGCCACTGTTGTTAGTAACCTAATGACTTGGTCATAACTAAGCTAATGTTTATTGGCAAGTCATGGATTGCGGGTAAAGCGTATATCTACTGCAATAGAATGATTATGAAACTATTTGAATAGCCGTGCTCACGGATTTGAGCATCGGGACTCATATGGTACTTTGGTTAGAAACTTGAATAATTTATTTTATAAATTCTTGCTTTAATTGACCAGATTGTCTACTATTGCTTTGTGCAAAAGAACCCCTCCATACTTATACCAATGCATGACATGTTTCCACAATAACTTGCTGAGTATTGCAAATACTCACCCTTGCTCCTATTACTCCTTTTTTCAGATTTGGGTCAAGAGAAGGACCCCTATAACTATTACTATGATGACCCCGATAACCTAGAAAATCCCTAGAGTTTATTCATTCCTAGTTAAAATATATTAAAGTTTCCGTTGTATAACATTAGGTCTAAGTATAGTTAAGTGAGTACCTACTCTTGTAAAACCCATAGTATTGTAAAATTTAACATATGCAATGAAAATT]
[+] EMBL CA765884             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTTTGGCACAGCATCACGTATATGTTTGACTCTACAT  TCTCTCTCTTCTTTTTGTTTAATCAAATTTTAAACAAAATTTTCAACTAAAATATGTATCTAATCTATAATTTAATTATACCATTTTATTTATTATAATTAAATCTTTATAACAAGATCTTACACGAACATATTTTGATTAAGAAAATATATGTGTTATAGAAAAATCAACCTTTTGTTGCACCATTCATAGATGCGAATGTTTCAGCCCACTTTATAAAATGTTCCAGTGATATGTAACTTATAAAATTTACAAACGGTAACAAGAACCTATGTTACATGAAACATTATATCCCAAATAGTGAAACATAAAAAAAAGTATGATACAGTATATTTGTAAACATTGATTTTGTTAAAATTTATATCACTATTAAAACGTCCACTTGTAATTTTTAAAACATAAAAAATTATTTGCTGAAACATATAGAAATATAGCGTGCAACAATAACTATATAAAATTTACAGACTGCAACAATAACCACCATTACATGAAACATTAGATCCCAACTAGAGAAACATAAAAAATATGATACAACATATTTGAAAATAAATTTATTTTTGGTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF306616             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TATCACTATTGAAACGTCCACTTGTAATTTTTAAAACATAAAAAATTTTTTGCTGAAACATATAGAAATATAGCGTGCAACAATAACTATATAAAATTTACAGACTGCAACAATAACCACCATTACATGAAACATTAGATCCCAACTAGAGAAACATAAAAAATATGATACAACATATTTGAAAAT AATTTA TTTTGTTGAAATTTTTAAAAAATAAAAAATATATTTACTGAAACATATAAAAAGACCACGTGCAACATTATAAATGAATCAGTGAAACAACAATAAATACTTATTGAAACATTGGAATAAAAAAATCATCGGAACATAGTCATATGAGATCTCATTATAAAGAGTTAATTGTCACAAATCTAATGGTATAATTAGTTCATAGTTCGGATAAATAGTTCAACAGAAAAGATCATTTAAATTTTAAATTTTAGATCTATCCGACTTGCATGCATGCTGGCTGCATGCACCTACCACTCNTGTTGGGGTGTCCGATTNTTTTTCCTTGCCCGGACATATGATGATAAGCATTTCCGGAAAGAAGGAGAGAAAAAGAAAAGGGAAAGAAAGTTACTGACAGGTGGGCCCCAGCACACTACTATTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF305716             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TTTTTCTGACACACTAGATAATATTAGTCAATCTTAGGACATCGAGCAAGGCAAGTTATTGTTCACCTCTTGCTCATTTAAGCCTATATTTTATAAATTATTTATTTATAGCCCTTCTATTCAAATATTCTCTTTTATATATGCATAACTCAACCATAGAAACCCAGATAATTTAGCTTTGCTTATTTTGCTTACAATCTGATTAAAATGCTTTATACTTAGATTGAGACAGTACGTAAGAATGGGTTGATTTTCGGGTGGCTAGTACTGTCTCAGTCGCCATAAATGTTACCAAGTACTTGTGACAAACGAACGTGTATGACCGCAGTTCTCGAATTGGTACAGACCTAGCTATTATGTTAATTAACAAAGTGGTACCTCTGTATAGTGGTTCTTGTTTTTAAGTCCACGAGCATGAGGCAAGTTTATGCCGAGGAGGGAAAATGTTATATTTATCGAGCAAGGGTAAATATATTGCGCGCTATGCGAGCAAGGGAAAATTTTATTTAAACCCTGATTGCGATGACATAGTGTCATACAATCAATCCTCTCTAAAGACCCCGGAAACACCAGAACTCTTCACATTGCTGATAACGTACGTTCAAAGCACATGGGGACTAGAGTTCATGGAATAGGTGCCACTGTTGTTAGTAACCTAATGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]




>consensus_8297#0
CCCCTCGAGCTCTGTCTTTATCTCTCTTCCTCAAGACCAGCTGCCGCCACCATCGGCCGA
TCTCCCTCACCGGAGCACCACTAACCAAATCCTCTCACCACCAGCCTTGCCTCACTCCGG
CGAACCCATTTTTCCAATTTTCCCCTTCTTTTTCGTCCCATGTCAAGCCCCACCGGAGCT
CTCTCTCTCTCTCTCTCTCTTGCCGGTTCACACTTCACAGTCTTGCTCTCGCCGTTCCGA
CCATTCCCTTAACTCCCTCTGCCGGCCACTGCCCACCCTAGGTGCTCCGCTCCCTGAAAC
ACCACCGGCCGCCGGCGTCGCCGCCTCCCAGCCACCAGAGCCCTGGCGCCCCTTCTTCCC
CCTCCTCTCAGTTGCTCGGCTGGAAGAAGAAAGAAGAAAGAAGAAGACGAGAGAAAGAAG
GCGAGCAAGCTAGGAATCGGACGTCCGTTATTTCTCCAAATATCGGACGCCGCTCACACT
CTGCCTATCTATTTGCATGGCATACTGCATGTGTGCATGCCTGCAGCGAGAAGTAGCGGT
GCAGCGAGTGGTAGGGGTGACAGAGGTTTGGCACAGCATCACATATATGTTTGACTCTAC
ATTCTCTCTCTCTTCTTTTTGTTTAATCAAATTTTAAACAAAATTTTCAACTAAAATATG
TATCTAATCTATAATTTGATTATACCATTTTATTTATTATAATTAAATCTTTATAAGAAG
ATCTTACACGAATATATTTTGATTAAGAAAATATATGTGTTCTAGAAAAATCAACCTTTT
GTTGCACCATTCATAGATGCGAATGTTTTAGCCCACTTTATAAAATGTTCCAGTGATATG
TAACTTATAAAATTTACAAACGGTAACAAGAACCTATGTTACATGAAACATTATGTCCCA
AATAGTGAAACATAAAAAAAAGTATGATACAGTATATTTGTAAACATTGATTTTGTTAAA
ATTTATATCACTATTGAAACGTCCACTTGTAATTTTTAAAACATAAAAAATTATTTGCTG
AAACATATAGAAATATAGCGTGCAACAATAACTATATAAAATTTACAGACTGCAACAATA
ACCACCATTACATGAAACATTAGATCCCAACTAGAGAAACATAAAAAATATGATACAACA
TATTTGAAAATAATTTATTTTGTTGAAATTTTTAAAAAATAAAAAATATATTTACTGAAA
CATATAAAAAGACCACGTGCAACATTATAAATGAATCAGTGAAACAACAATAAATACTTA
TTGAAACATTGGAATAAAAAAATCATCGGAACATAGTCATATGAGATCTCATTATAAAGA
GTTAATTGTCACAAATCTAATGGTATAATTAGTTCATAGTTCGGATAAATAGTTCAACAG
AAAAGATCATTTAAATTTTAAATTTTAGATCTATCCGACTTGCATGCATGCTGGCTGCAT
GCACCTACCACTCTGTTGGGGTGTCCGATTTTTTTTCCTTGCCCGGACATATGATGATAA
GCATTTCCGGAAAGAAGGAGAGAAAAAGAAAAGGGAAAGAAAGTTACTGACAGGTGGGCC
CCAGCACACTACTATTTCACAATTTCTAGATTTAATTCAGATCCTAATCTTTAGAAGCCC
ATATCTTTTGAAATATAAAACCAATTCTAGTGAAACTTGGACCAAAATTCTTCTAAAATC
TTTCTCTATCTTTTGAGGCTATTTTTACTATTTTCTCATTTTATTTTATTTTTTCCTATT
TTTGGACTTCATTCGAATCCCTTTTGAATTTGAATTTTATATATTTAACCCTAGGTCTTG
AGGATTTTTCTGACACACTAGATAATATTAGTCAATCTTAGGACATCGAGCAAGGCAAGT
TATTGTTCACCTCTTGCTCATTTAAGCCTATATTTTATAAATTATTTATTTATAGCCCTT
CTATTCAAATATTCTCTTTTATATATGCATAACTCAACCATAGAAACCCAGATAATTTAG
CTTTGCTTATTTTGCTTACAATCTGATTAAAATGCTTTATACTTAGATTGAGACAGTACG
TAAGAATGGGTTGATTTTCGGGTGGCTAGTACTGTCTCAGTCGCCATAAATGTTACCAAG
TACTTGTGACAAACGAACGTGTATGACCGCAGTTCTCGAATTGGTACAGACCTAGCTATT
ATGTTAATTAACAAAGTGGTACCTCTGTATAGTGGTTCTTGTTTTTAAGTCCACGAGCAT
GAGGCAAGTTTATGCCGAGGAGGGAAAATGTTATATTTATCGAGCAAGGGTAAATATATT
GCGCGCTATGCGAGCAAGGGAAAATTTTATTTAAACCCTGATTGCGATGACATAGTGTCA
TACAATCAATCCTCTCTAAAGACCCCGGAAACACCAGAACTCTTCACATTGCTGATAACG
TACGTTCAAAGCACATGGGGACTAGAGTTCATGGAATAGGTGCCACTGTTGTTAGTAACC
TAATGACTTGGTCATAACTAAGCTAATGTTTATTGGCAAGTCATGGATTGCGGGTAAAGC
GTATATCTACTGCAATAGAATGATTATGAAACTATTTGAATAGCCGTGCTCACGGATTTG
AGCATCGGGACTCATATGGTACTTTGGTTAGAAACTTGAATAATTTATTTTATAAATTCT
TGCTTTAATTGACCAGATTGTCTACTATTGCTTTGTGCAAAAGAACCCCTCCATACTTAT
ACCAATGCATGACATGTTTCCACAATAACTTGCTGAGTATTGCAAATACTCACCCTTGCT
CCTATTACTCCTTTTTTCAGATTTGGGTCAAGAGAAGGACCCCTATAACTATTACTATGA
TGACCCCGATAACCTAGAAAATCCCTAGAGTTTATTCATTCCTAGTTAAAATATATTAAA
GTTTCCGTTGTATAACATTAGGTCTAAGTATAGTTAAGTGAGTACCTACTCTTGTAAAAC
CCATAGTATTGTAAAATTTAACATATGCAATGAAAATT

consensusID : consensus_8297#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 614
fasta sequence

                              [GAAAGAAGAAGACGAGAGAAAGAAGGCGAGCAAGCTAGGAATCGGACGTCCGTTATTTCTCCAAATATCGGACGCCGCTCACACTCTGCCTATCTATTTGCATGGCATACTGCATGTGTGCATGCCTGCAGCGAGAAGTAGCGGTGCAGCGAGTGGTAGGGGTGACAGAGGTTTGGCACAGCATCACATATATGTTTGACTCTACATTCTCTCTCTCTTCTTTTTGTTTAATCAAATTTTAAACAAAATTTTCAACTAAAATATGTATCTAATCTATAATTAGTTCATAGTTCGGATAAATAGTTCAACAGAAAAGATCATTTAAATTTTAAATTTTAGATCTATCCGACTTGCATGCATGCTGGCTGCATGCACCTACCACTCTGTTGGGGTGTCCGATTTTTTTTCCTTGCCCGGACATATGATGATAAGCATTTCCGGAAAGAAGGAGAGAAAAAGAAAAGGGAAAGAAAGTTACTGACAGGTGGGCCCCAGCACACTACTATTTCACAATTTCTAGATTTAATTCAGATCCTAATCTTTAGAAGCCCATATCTTTTGAAATATAAAACCAATTCTAGTGAAACTTGGACCAAAATTCTTCTAAAATCTTT]

[+] EMBL CF306735             [GAAAGAAGAAGACGAGAGAAAGAAGGCGAGCAAGCTAGGAATCGGACGTCCGTTATTTCTCCAAATATCGGACGCCGCTCACACTCTGCCTATCTATTTGCATGGCATACTGCATGTGTGCATGCCTGCAGCGAGAAGTAGCGGTGCAGCGAGTGGTAGGGGTGACAGAGGTTTGGCACAGCATCACATATATGTTTGACTCTACATTCTCTCTCTCTTCTTTTTGTTTAATCAAATTTTAAACAAAATTTTCAACTAAAATATGTATCTAATCTATAATTAGTTCATAGTTCGGATAAATAGTTCAACAGAAAAGATCATTTAAATTTTAAATTTTAGATCTATCCGACTTGCATGCATGCTGGCTGCATGCACCTACCACTCTGTTGGGGTGTCCGATTTTTTTTCCTTGCCCGGACATATGATGATAAGCATTTCCGGAAAGAAGGAGAGAAAAAGAAAAGGGAAAGAAAGTTACTGACAGGTGGGCCCCAGCACACTACTATTTCACAATTTCTAGATTTAATTCAGATCCTAATCTTTAGAAGCCCATATCTTTTGAAATATAAAACCAATTCTAGTGAAACTTGGACCAAAATTCTTCTAAAATCTTT]




>consensus_8297#1
GAAAGAAGAAGACGAGAGAAAGAAGGCGAGCAAGCTAGGAATCGGACGTCCGTTATTTCT
CCAAATATCGGACGCCGCTCACACTCTGCCTATCTATTTGCATGGCATACTGCATGTGTG
CATGCCTGCAGCGAGAAGTAGCGGTGCAGCGAGTGGTAGGGGTGACAGAGGTTTGGCACA
GCATCACATATATGTTTGACTCTACATTCTCTCTCTCTTCTTTTTGTTTAATCAAATTTT
AAACAAAATTTTCAACTAAAATATGTATCTAATCTATAATTAGTTCATAGTTCGGATAAA
TAGTTCAACAGAAAAGATCATTTAAATTTTAAATTTTAGATCTATCCGACTTGCATGCAT
GCTGGCTGCATGCACCTACCACTCTGTTGGGGTGTCCGATTTTTTTTCCTTGCCCGGACA
TATGATGATAAGCATTTCCGGAAAGAAGGAGAGAAAAAGAAAAGGGAAAGAAAGTTACTG
ACAGGTGGGCCCCAGCACACTACTATTTCACAATTTCTAGATTTAATTCAGATCCTAATC
TTTAGAAGCCCATATCTTTTGAAATATAAAACCAATTCTAGTGAAACTTGGACCAAAATT
CTTCTAAAATCTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8297#0      CCCCTCGAGCTCTGTCTTTATCTCTCTTCCTCAAGACCAGCTGCCGCCACCATCGGCCGA 60
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      TCTCCCTCACCGGAGCACCACTAACCAAATCCTCTCACCACCAGCCTTGCCTCACTCCGG 120
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      CGAACCCATTTTTCCAATTTTCCCCTTCTTTTTCGTCCCATGTCAAGCCCCACCGGAGCT 180
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      CTCTCTCTCTCTCTCTCTCTTGCCGGTTCACACTTCACAGTCTTGCTCTCGCCGTTCCGA 240
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      CCATTCCCTTAACTCCCTCTGCCGGCCACTGCCCACCCTAGGTGCTCCGCTCCCTGAAAC 300
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      ACCACCGGCCGCCGGCGTCGCCGCCTCCCAGCCACCAGAGCCCTGGCGCCCCTTCTTCCC 360
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      CCTCCTCTCAGTTGCTCGGCTGGAAGAAGAAAGAAGAAAGAAGAAGACGAGAGAAAGAAG 420
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      GCGAGCAAGCTAGGAATCGGACGTCCGTTATTTCTCCAAATATCGGACGCCGCTCACACT 480
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      CTGCCTATCTATTTGCATGGCATACTGCATGTGTGCATGCCTGCAGCGAGAAGTAGCGGT 540
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      GCAGCGAGTGGTAGGGGTGACAGAGGTTTGGCACAGCATCACATATATGTTTGACTCTAC 600
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      ATTCTCTCTCTCTTCTTTTTGTTTAATCAAATTTTAAACAAAATTTTCAACTAAAATATG 660
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      TATCTAATCTATAATTTGATTATACCATTTTATTTATTATAATTAAATCTTTATAAGAAG 720
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      ATCTTACACGAATATATTTTGATTAAGAAAATATATGTGTTCTAGAAAAATCAACCTTTT 780
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      GTTGCACCATTCATAGATGCGAATGTTTTAGCCCACTTTATAAAATGTTCCAGTGATATG 840
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      TAACTTATAAAATTTACAAACGGTAACAAGAACCTATGTTACATGAAACATTATGTCCCA 900
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      AATAGTGAAACATAAAAAAAAGTATGATACAGTATATTTGTAAACATTGATTTTGTTAAA 960
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      ATTTATATCACTATTGAAACGTCCACTTGTAATTTTTAAAACATAAAAAATTATTTGCTG 1020
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      AAACATATAGAAATATAGCGTGCAACAATAACTATATAAAATTTACAGACTGCAACAATA 1080
consensus_8297#1      -------------------------------------GAAAGAAGAAGAC-GAGAGAAAG 22
                                                            ***     **** *  * **  

consensus_8297#0      ACCACCATTACATGAAACATTAGATCCCAACTAGAGAAACATAAAAAATATGATACAACA 1140
consensus_8297#1      AAGGCGAGCAAGCTAGGAATCGGACGTCCGTTATTT---CTCCAAATATCGGACGCCGCT 79
                      *   * *  *    *   **  **   *   **      *   *** **  **  *  * 

consensus_8297#0      TATTTGAAAATAATTTATTTTGTTGAAATTTTTAAAAAATAAAAAATATATTTACTGAAA 1200
consensus_8297#1      CACACTCTGCCTATCTATTTGCATGGCATACTGCATGTGT-----GCATGCCTGCAGCGA 134
                       *          ** *****   **  **  *  *    *       **   * * *  *

consensus_8297#0      CATATAAAAAGACCACGTGCAACATTATAAATGAATCAGTGAAACAACAATAAATACTTA 1260
consensus_8297#1      GAAGTAGCGGTGCAGCGAGTGGTAGGGGTGACAGAGGTTTGGCACAGCATCACATATATG 194
                       *  **      *  ** *    *      *   *    **  *** **  * ***  * 

consensus_8297#0      TTGAAACATTGGAATAAAAAAATCATCGGAACATAGTCATATGAGATCTCATTATAAAGA 1320
consensus_8297#1      TTTGA-CTCTACATTCTCTCTCTCTTC---TTTTTGTTTAATCAAATTTTAAACAAAATT 250
                      **  * *  *  * *       ** **      * **   ** * ** * *    ***  

consensus_8297#0      GTTAATTGTCACAA--ATCTAATGGTATAATTAGTTCATAGTTCGGATAAATAGTTCAAC 1378
consensus_8297#1      TTCAACTAAAATATGTATCTAATC-TATAATTAGTTCATAGTTCGGATAAATAGTTCAAC 309
                       * ** *   * *   *******  ***********************************

consensus_8297#0      AGAAAAGATCATTTAAATTTTAAATTTTAGATCTATCCGACTTGCATGCATGCTGGCTGC 1438
consensus_8297#1      AGAAAAGATCATTTAAATTTTAAATTTTAGATCTATCCGACTTGCATGCATGCTGGCTGC 369
                      ************************************************************

consensus_8297#0      ATGCACCTACCACTCTGTTGGGGTGTCCGATTTTTTTTCCTTGCCCGGACATATGATGAT 1498
consensus_8297#1      ATGCACCTACCACTCTGTTGGGGTGTCCGATTTTTTTTCCTTGCCCGGACATATGATGAT 429
                      ************************************************************

consensus_8297#0      AAGCATTTCCGGAAAGAAGGAGAGAAAAAGAAAAGGGAAAGAAAGTTACTGACAGGTGGG 1558
consensus_8297#1      AAGCATTTCCGGAAAGAAGGAGAGAAAAAGAAAAGGGAAAGAAAGTTACTGACAGGTGGG 489
                      ************************************************************

consensus_8297#0      CCCCAGCACACTACTATTTCACAATTTCTAGATTTAATTCAGATCCTAATCTTTAGAAGC 1618
consensus_8297#1      CCCCAGCACACTACTATTTCACAATTTCTAGATTTAATTCAGATCCTAATCTTTAGAAGC 549
                      ************************************************************

consensus_8297#0      CCATATCTTTTGAAATATAAAACCAATTCTAGTGAAACTTGGACCAAAATTCTTCTAAAA 1678
consensus_8297#1      CCATATCTTTTGAAATATAAAACCAATTCTAGTGAAACTTGGACCAAAATTCTTCTAAAA 609
                      ************************************************************

consensus_8297#0      TCTTTCTCTATCTTTTGAGGCTATTTTTACTATTTTCTCATTTTATTTTATTTTTTCCTA 1738
consensus_8297#1      TCTTT------------------------------------------------------- 614
                      *****                                                       

consensus_8297#0      TTTTTGGACTTCATTCGAATCCCTTTTGAATTTGAATTTTATATATTTAACCCTAGGTCT 1798
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      TGAGGATTTTTCTGACACACTAGATAATATTAGTCAATCTTAGGACATCGAGCAAGGCAA 1858
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      GTTATTGTTCACCTCTTGCTCATTTAAGCCTATATTTTATAAATTATTTATTTATAGCCC 1918
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      TTCTATTCAAATATTCTCTTTTATATATGCATAACTCAACCATAGAAACCCAGATAATTT 1978
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      AGCTTTGCTTATTTTGCTTACAATCTGATTAAAATGCTTTATACTTAGATTGAGACAGTA 2038
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      CGTAAGAATGGGTTGATTTTCGGGTGGCTAGTACTGTCTCAGTCGCCATAAATGTTACCA 2098
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      AGTACTTGTGACAAACGAACGTGTATGACCGCAGTTCTCGAATTGGTACAGACCTAGCTA 2158
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      TTATGTTAATTAACAAAGTGGTACCTCTGTATAGTGGTTCTTGTTTTTAAGTCCACGAGC 2218
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      ATGAGGCAAGTTTATGCCGAGGAGGGAAAATGTTATATTTATCGAGCAAGGGTAAATATA 2278
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      TTGCGCGCTATGCGAGCAAGGGAAAATTTTATTTAAACCCTGATTGCGATGACATAGTGT 2338
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      CATACAATCAATCCTCTCTAAAGACCCCGGAAACACCAGAACTCTTCACATTGCTGATAA 2398
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      CGTACGTTCAAAGCACATGGGGACTAGAGTTCATGGAATAGGTGCCACTGTTGTTAGTAA 2458
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      CCTAATGACTTGGTCATAACTAAGCTAATGTTTATTGGCAAGTCATGGATTGCGGGTAAA 2518
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      GCGTATATCTACTGCAATAGAATGATTATGAAACTATTTGAATAGCCGTGCTCACGGATT 2578
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      TGAGCATCGGGACTCATATGGTACTTTGGTTAGAAACTTGAATAATTTATTTTATAAATT 2638
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      CTTGCTTTAATTGACCAGATTGTCTACTATTGCTTTGTGCAAAAGAACCCCTCCATACTT 2698
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      ATACCAATGCATGACATGTTTCCACAATAACTTGCTGAGTATTGCAAATACTCACCCTTG 2758
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      CTCCTATTACTCCTTTTTTCAGATTTGGGTCAAGAGAAGGACCCCTATAACTATTACTAT 2818
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      GATGACCCCGATAACCTAGAAAATCCCTAGAGTTTATTCATTCCTAGTTAAAATATATTA 2878
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      AAGTTTCCGTTGTATAACATTAGGTCTAAGTATAGTTAAGTGAGTACCTACTCTTGTAAA 2938
consensus_8297#1      ------------------------------------------------------------
                                                                                  

consensus_8297#0      ACCCATAGTATTGTAAAATTTAACATATGCAATGAAAATT 2978
consensus_8297#1      ----------------------------------------