cluster # 8322

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Oryza sativa
cluster # 8322 cluster # 8322 Sequences # 5 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8322#0 length = 374 sequences # 5

consensusID : consensus_8322#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 374
fasta sequence

                              [CAGGCACTAAATACCTCACTAAGGGAATAGCTGCGGCGCTCCAACATAAAATGGCAGC-ACCTACACAACACACTACAGATGTTTCTGAAGCTTCACGTATGCTTCCTCCCAAACAACACACTACAACACA-GCACACTCTGGTCGCCATATGATCCAACAGATTACACACGATTCCAAATATTGGAACTCAGGGCTGAAGAAAATAGGCTAATCAATTCGTCCGACAGATTGAACCCCCGAAACATTTTGAGGAACAAACGAACTAACTGTTATTAGTACTAAGGTTAAGGCAAAGATAGAAAGCTTCCAGATCTAGAAGTGAAACTAGGGTTTAAGCAAATCCGAGAATGGTGTGGTTTAGGGACGGATGACAG]

[+] EMBL CB965872             [CAGGCACTAAATACCTCACTAAGGGAATAGCTGCGGCGCTCCAACATAAAATGGCAGC ACCTACA AACACACTACAGATGTTTCTGAAGCTTCACGTATGCTTCCTCCCAAACAACACACTACAACACA GCACACTCTGGTCGCCATATGATCCAACAGATTACACACGATTCCAAATATTGGAACTCAGGGCTGAAGAAAATAGGCTAATCAATTCGTCCGACAGATTGAACCCCCGAAACATTTTGAGGAACAAACGAACTAACTGTTATTAGTACTAAGGTTAAGGCAAAGATAGAAAGCTTCCAGATCTAGAAGTGAAACTAGGGTTTAAGCAAATCCGAGAATGGTGTGGTTTAGGGACGGATGACA ]
[+] EMBL BI306576             [                                                AAATGGCAGCAACCTACACAACACACTACAGATGTTTCTGAAGCTTCACGTATGCTTCCTCCCAAACAACACACTACAACACA GCACACTCTGGTCGCCATATGATCCAACAGATTACACACGATTCCAAATATTGGAACTCAGGGCTGAAGAAAATAGGCTAATCAATTCGTCCGACAGATTGAACCCCCGAAACATTTTGAGGAACAAACGAACTAACTGTTATTAGTACTAAGGTTAAGGCAAAGATAGAAAGCTTCCAGATCTAGAAGTGAAACTAGGGTTTAAGCAAATCCGAGAATGGTGTGGTTTAGGGACGGATGACAG]
[+] EMBL CB966797             [                                                               ACACAACACACTACAGATGTTTCTGAAGCTTCACGTATGCTTCCTCCCAAACAACACACTACAACACANGCACACTCTGGTCGCCATATGATCCAACAGATTACACACGATTCCAAATATTGGAACTCAGGGCTGAAGAAAATAGGCTAATCAATTCGTCCGACAGATTGAACCCCCGAAACATTTTGAGGAACAAACGAACTAACTGTTATTAGTACTAAGGTTAAGGCAAAGATAGAAAGCTTCCAGATCTAGAAGTGAAACTAGGGTTTAAGCAAATCCGAGAATGGTGTGGTTTAGGGACGGATGACA ]
[+] EMBL CB966476             [                                                               ACACAACACACTACAGATGTTTCTGAAGCTTCACGTATGCTTCCTCCCAAACAACACACTACAACACA GCACACTCTGGTCGCCATATGATCCAACAGATTACACACGATTCCAAATATTGGAACTCAGGGCTGAAGAAAATAGGCTAATCAATTCGTCCGACAGATTGAACCCCCGAAACATTTTGAGGAACAAACGAACTAACTGTTATTAGTACTAAGGTTAAGGCAAAGATAGAAAGCTTCCAGATCTAGAAGTGAAACTAGGGTTTAAGCAAATCCGAGAATGGTGTGGTTTAGGGACGGATGACA ]
[+] EMBL CB966805             [                                                               ACACAACACACTACAGATGTTTCTGAAGCTTCACGTATGCTTCCTCCCAAACAACACACTACAACACA GCACACTCTGGTCGCCATATGATCCAACAGATTACACACGATTCCAAATATTGGAACTCAGGGCTGAAGAAAATAGGCTAATCAATTCGTCCGACAGATTGAACCCCCGAAACATTTTGAGGAACAAACGAACTAACTGTTATTAGTACTAAGGTTAAGGCAAAGATAGAAAGCTTCCAGATCTAGAAGTGAAACTAGGGTTTAAGCAAATCCGAGAATGGTGTGGTTTAGGGACGGATGACA ]




>consensus_8322#0
CAGGCACTAAATACCTCACTAAGGGAATAGCTGCGGCGCTCCAACATAAAATGGCAGCAC
CTACACAACACACTACAGATGTTTCTGAAGCTTCACGTATGCTTCCTCCCAAACAACACA
CTACAACACAGCACACTCTGGTCGCCATATGATCCAACAGATTACACACGATTCCAAATA
TTGGAACTCAGGGCTGAAGAAAATAGGCTAATCAATTCGTCCGACAGATTGAACCCCCGA
AACATTTTGAGGAACAAACGAACTAACTGTTATTAGTACTAAGGTTAAGGCAAAGATAGA
AAGCTTCCAGATCTAGAAGTGAAACTAGGGTTTAAGCAAATCCGAGAATGGTGTGGTTTA
GGGACGGATGACAG

clustalw multiple alignements is not computed in this case