cluster # 8386

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Oryza sativa
cluster # 8386 cluster # 8386 Sequences # 5 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8386#0 length = 1503 sequences # 5
consensusID : consensus_8386#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1503
fasta sequence
                              [GGCGTTCCCCGCCTCCTTAAACAGTTAAACCTACCCAAATCCCCAAATTCCGCCGCCGCCTCCTCCTCCTCCTCTCGCCGCCGGCGAGAACCACGGCGAGGTGACCAACCAACCCCAACCCCCATCGCGCCCCCCGCCACTGCCTCTTCTCCCCCCGCCCGCCCGGGATTCCGTCCATGGACCGGCCGAGGAGGCCGGGGAGCGACCGCCGGTACCCTCCGCTGCGGTTCAGGAAGCGGAAGAGGAGCAGCAGCGACAGTAGAAGCAGCAAGCTCAACAACAAGCCAGGGTCTGATAAGTGGGAGGATGTCTGTTCAATTTGTGATGATGGTGGTGATTTTCTTTGCTGTGAGGGCAGATGTTTGAGGTCTTTCCACGCAACAGAGAAACACATTACAGAAATAAACCAGTGCACAACCCTTGGGCTAACTGAAGAACAATGGAAGATCTTTAGGCAAAATGATGAAAAGAGTGAACCGCTATATATATGCAAGAACTGTAAGTATAATCAGCATCAGTGTTTCTCGTGTGGATTGCTGGGTTCTTCAGACTTGTCATCAGGGGCTGAGGTATTCCAATGTGAAGATGAAAAATGTGGACACTTTTACCATCCGAAGTGTCTAGCTAGACTACTCTACCCTGATAGCAGTATGCAGCCCTTAAATTTTGAGGAGGAAGTTGCCCGTGGACTGAAATTCCTTTGTCCGGTGCATAAATGCCATGTATGCAAGGGAGGAGAGAACAAGAATGACATGGAAAATCAATTTGCAGTATGCAGACGCTGTCCAACTGTATACCACAGGAAGTGCTTACCAAGTGACATAGTCTTTGAAGATGATGAAAGTAATGGTATCGTGCAAAGGGCGTGGGATGACGTACTTCGTGATCAAATTTTGATCTACTGCATGAAGCATGAGATTGATCCAGAACTGGGAACTCCCGCGAGGAACCACATTATCTTTCCTGATTGCAAAAACCTTTTAACACGTGGTCCTTCGAAGCCCAAAGGGCAAGAAGACGCACCCGCAGTACTAGATATACCTGAAGAAGACATGTCGCCTGATCATTCCTCCGAACCATCCCAGCCGCCTCCACAGCCGGCAGCTGAAACTGATCAAACTGACCAGGATCTTTCCAATGGTTTCAATTCGTTTGCGCCGAAGGCCTTGTTCCCACTTCCATATCCAGGCTCCTGTGGTTGGCTTGATGACTGACCATCCAACCTCACTCATCTAGATAAATCCTAACACATATATACGCCAGCAGATTGGTGTAATTCCTGCTAGAACACTTTGTTCGGAAATTGGGAAGTTAGAATGTGCAACGCAATCTACTCTGTTGAACTGTCACGTGCTAAGCCACTTGTGTGTATTGTTATCATTATTATGTTATTATTTTAATGGAAGATAACATTGCGGTTGACCAGTGTCCAGTAGCCTGCATTATGTTTCTGATGTTTTTGTTTCCAGAGATGTCCAAGTGAAGCAATAAGCTGGTGCATAT]

[+] EMBL AK063569             [GGCGTTCCCCGCCTCCTTAAACAGTTAAACCTACCCAAATCCCCAAATTCCGCCGCCGCCTCCTCCTCCTCCTCTCGCCGCCGGCGAGAACCACGGCGAGGTGACCAACCAACCCCAACCCCCATCGCGCCCCCCGCCACTGCCTCTTCTCCCCCCGCCCGCCCGGGATTCCGTCCATGGACCGGCCGAGGAGGCCGGGGAGCGACCGCCGGTACCCTCCGCTGCGGTTCAGGAAGCGGAAGAGGAGCAGCAGCGACAGTAGAAGCAGCAAGCTCAACAACAAGCCAGGGTCTGATAAGTGGGAGGATGTCTGTTCAATTTGTGATGATGGTGGTGATTTTCTTTGCTGTGAGGGCAGATGTTTGAGGTCTTTCCACGCAACAGAGAAACACATTACAGAAATAAACCAGTGCACAACCCTTGGGCTAACTGAAGAACAATGGAAGATCTTTAGGCAAAATGATGAAAAGAGTGAACCGCTATATATATGCAAGAACTGTAAGTATAATCAGCATCAGTGTTTCTCGTGTGGATTGCTGGGTTCTTCAGACTTGTCATCAGGGGCTGAGGTATTCCAATGTGAAGATGAAAAATGTGGACACTTTTACCATCCGAAGTGTCTAGCTAGACTACTCTACCCTGATAGCAGTATGCAGCCCTTAAATTTTGAGGAGGAAGTTGCCCGTGGACTGAAATTCCTTTGTCCGGTGCATAAATGCCATGTATGCAAGGGAGGAGAGAACAAGAATGACATGGAAAATCAATTTGCAGTATGCAGACGCTGTCCAACTGTATACCACAGGAAGTGCTTACCAAGTGACATAGTCTTTGAAGATGATGAAAGTAATGGTATCGTGCAAAGGGCGTGGGATGACGTACTTCGTGATCAAATTTTGATCTACTGCATGAAGCATGAGATTGATCCAGAACTGGGAACTCCCGCGAGGAACCACATTATCTTTCCTGATTGCAAAAACCTTTTAACACGTGGTCCTTCGAAGCCCAAAGGGCAAGAAGACGCACCCGCAGTACTAGATATACCTGAAGAAGACATGTCGCCTGATCATTCCTCCGAACCATCCCAGCCGCCTCCACAGCCGGCAGCTGAAACTGATCAAACTGACCAGGATCTTTCCAATGGTTTCAATTCGTTTGCGCCGAAGGCCTTGTTCCCACTTCCATATCCAGGCTCCTGTGGTTGGCTTGATGACTGACCATCCAACCTCACTCATCTAGATAAATCCTAACACATATATACGCCAGCAGATTGGTGTAATTCCTGCTAGAACACTTTGTTCGGAAATTGGGAAGTTAGAATGTGCAACGCAATCTACTCTGTTGAACTGTCACGTGCTAAGCCACTTGTGTGTATTGTTATCATTATTATGTTATTATTTTAATGGAAGATAACATTGCGGTTGACCAGTGTCCAGTAGCCTGCATTATGTTTCTGATGTTTTTGTTTCCAGAGATGTCCAAGTGAAGCAATAAGCTGGTGCATAT]
[+] EMBL AK103802             [     TCCCCGCCTCCTTAAACAGTTAAACCTACCCAAATCCCCAAATTCCGCCGCCGCCTCCTCCTCCTCCTCTCGCCGCCGGCGAGAACCACGGCGAGGTGACCAACCAACCCCAACCCCCATCGCGCCCCCCGCCACTGCCTCTTCTCCCCCCGCCCGCCCGGGATTCCGTCCATGGACCGGCCGAGGAGGCCGGGGAGCGACCGCCGGTACCCTCCGCTGCGGTTCAGGAAGCGGAAGAGGAGCAGCAGCGACAGTAGAAGCAGCAAGCTCAACAACAAGCCAGGGTCTGATAAGTGGGAGGATGTCTGTTCAATTTGTGATGATGGTGGTGATTTTCTTTGCTGTGAGGGCAGATGTTTGAGGTCTTTCCACGCAACAGAGGAACACATTACAGAAATAAACCAGTGCACAACCCTTGGGCTAACTGAAGAACAATGGAAGATCTTTAGGCAAAATGATGAAAAGAGTGAACCGCTATATATATGCAAGAACTGTAAGTATAATCAGCATCAGTGTTTCTCGTGTGGATTGCTGGGTTCTTCAGACTTGTCATCAGGGGCTGAGGTATTCCAATGTGAAGATGAAAAATGTGGACACTTTTACCATCCGAAGTGTCTAGCTAGACTACTCTACCCTGATAGCAGTATGCAGCCCTTAAATTTTGAGGAGGAAGTTGCCCGTGGACTGAAATTCCTTTGTCCGGTGCATAAATGCCATGTATGCAAGGGAGGAGAGAACAAGAATGACATGGAAAATCAATTTGCAGTATGCAGACGCTGTCCAACTGTATACCACAGGAAGTGCTTACCAAGTGACATAGTCTTTGAAGATGATGAAAGTAATGGTATCGTGCAAAGGGCGTGGGATGACGTACTTCGTGATCAAATTTTGATCTACTGCATGAAGCATGAGATTGATCCAGAACTGGGAACTCCCGCGAGGAACCACATTATCTTTCCTGATTGCAAAAACCTTTTAACACGTGGTCCTTCGAAGCCCAAAGGGCAAGAAGACGCACCCGCAGTACTAGATATACCTGAAGAAGACATGTCGCCTGATCATTCCTCCGAACCATCCCAGCCGCCTCCACAGCCGGCAGCTGAAACTGATCAAACTGACCAGGATCTTTCCAATGGTTTCAATTCGTTTGCGCCGAAGGCCTTGTTCCCACTTCCATATCCAGGCTCCTGTGGTTGGCTTGATGACTGACCATCCAACCTCACTCATCTAGATAAATCCTAACACATATATACGCCAGCAGATTGGTGTAATTCCTGCTAGAACACTTTGTTCGGAAATTGGGAAGTTAGAATGTGCAACGCAATCTACTCTGTTGAACTGTCACGTGCTAAGCCACTTGTGTGTATTGTTATCATTATTATGTTATTATTTTAATGGAAGATAACATT                                                                                         ]
[+] EMBL CF305749             [              gCTTAAACAGTTAAACCTACCCAAATCCCCAAATTCCGCCGCCGCCTCCTCCTCCTCCTCTCGCCGCCGGCGAGAACCACGGCGAGGTGACCAACCAACCCCAACCCCCATCGCGCCCCCCGCCACTGCCTCTTCTCCCCTTTTTTGCCCGGGATTCCGTCCATGGACCGGCCGAGGAGGCCGGGGAGCGACCGCCGGTACCCTCCGCTGCGGTTCAGGAAGCGGAAGAGGAGCAGCAGCGACAGTAGAAACAGCAAGCTCAACAACAAGCCAGGGACTGATAAGTGGGAGGATGTCTGTTCAATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL BI306498             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GTGGTCCTTCGAAGCCCAAAGGGCAAGAAGACGCACCCGCAGTACTAGATATACCTGAAGAAGACATGTCGCCTGATCATTCCTCCGAACCATCCCAGCCGCCTCCACAGCCGGCAGCTGAAACTGATCAAACTGACCAGGATCTTTCCAATGGTTTCAATTCGTTTGCGCCGAAGGCCTTGTTCCCACTTCCATATCCAGGCTCCTGTGGTTGGCTTGATGACTGACCATCCAACCTCACTCATCTAGATAAATCCTAACACATATATACGCCAGCAGATTGGTGTAATTCCTGCTAGAACACTTTGTTCGGAAATTGGGAAGTTAGAATGTGCAACGCAATCTACTCTGTTGAACTGTCACGTGCTAAGCCACTTGTGTGTATTGTTATCATTATTATGTTATTATTTTAATGGAAGATAACATTG                                                                                        ]
[-] EMBL CB967128             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGAAGCCCAAAGGGCAAGAAGACGCACCCGCAGTACTAGATATACCTGAAGAAGACATGTCGCCTGATCATTCCTCCGAACCATCCCAGCCGCCTCCACAGCCGGCAGCTGAAACTGATCAAACTGACCAGGATCTTTCCAATGGTTTCAATTCGTTTGCGCCGAAGGCCTTGTTCCCACTTCCATATCCAGGCTCCTGTGGTTGGCTTGATGACTGACCATCCAACCTCACTCATCTAGATAAATCCTAACACATATATACGCCAGCAGATTGGTGTAATTCCTGCTAGAACACTTTGTTCGGAAATTGGGAAGTTAGAATGTGCAACGCAATCTACTCTGTTGAACTGTCACGTGCTAAGCCACTTGTGTGTATTGTTATCATTATTATGTTATTATTTTAATGGAAGATAACATT                                                                                         ]




>consensus_8386#0
GGCGTTCCCCGCCTCCTTAAACAGTTAAACCTACCCAAATCCCCAAATTCCGCCGCCGCC
TCCTCCTCCTCCTCTCGCCGCCGGCGAGAACCACGGCGAGGTGACCAACCAACCCCAACC
CCCATCGCGCCCCCCGCCACTGCCTCTTCTCCCCCCGCCCGCCCGGGATTCCGTCCATGG
ACCGGCCGAGGAGGCCGGGGAGCGACCGCCGGTACCCTCCGCTGCGGTTCAGGAAGCGGA
AGAGGAGCAGCAGCGACAGTAGAAGCAGCAAGCTCAACAACAAGCCAGGGTCTGATAAGT
GGGAGGATGTCTGTTCAATTTGTGATGATGGTGGTGATTTTCTTTGCTGTGAGGGCAGAT
GTTTGAGGTCTTTCCACGCAACAGAGAAACACATTACAGAAATAAACCAGTGCACAACCC
TTGGGCTAACTGAAGAACAATGGAAGATCTTTAGGCAAAATGATGAAAAGAGTGAACCGC
TATATATATGCAAGAACTGTAAGTATAATCAGCATCAGTGTTTCTCGTGTGGATTGCTGG
GTTCTTCAGACTTGTCATCAGGGGCTGAGGTATTCCAATGTGAAGATGAAAAATGTGGAC
ACTTTTACCATCCGAAGTGTCTAGCTAGACTACTCTACCCTGATAGCAGTATGCAGCCCT
TAAATTTTGAGGAGGAAGTTGCCCGTGGACTGAAATTCCTTTGTCCGGTGCATAAATGCC
ATGTATGCAAGGGAGGAGAGAACAAGAATGACATGGAAAATCAATTTGCAGTATGCAGAC
GCTGTCCAACTGTATACCACAGGAAGTGCTTACCAAGTGACATAGTCTTTGAAGATGATG
AAAGTAATGGTATCGTGCAAAGGGCGTGGGATGACGTACTTCGTGATCAAATTTTGATCT
ACTGCATGAAGCATGAGATTGATCCAGAACTGGGAACTCCCGCGAGGAACCACATTATCT
TTCCTGATTGCAAAAACCTTTTAACACGTGGTCCTTCGAAGCCCAAAGGGCAAGAAGACG
CACCCGCAGTACTAGATATACCTGAAGAAGACATGTCGCCTGATCATTCCTCCGAACCAT
CCCAGCCGCCTCCACAGCCGGCAGCTGAAACTGATCAAACTGACCAGGATCTTTCCAATG
GTTTCAATTCGTTTGCGCCGAAGGCCTTGTTCCCACTTCCATATCCAGGCTCCTGTGGTT
GGCTTGATGACTGACCATCCAACCTCACTCATCTAGATAAATCCTAACACATATATACGC
CAGCAGATTGGTGTAATTCCTGCTAGAACACTTTGTTCGGAAATTGGGAAGTTAGAATGT
GCAACGCAATCTACTCTGTTGAACTGTCACGTGCTAAGCCACTTGTGTGTATTGTTATCA
TTATTATGTTATTATTTTAATGGAAGATAACATTGCGGTTGACCAGTGTCCAGTAGCCTG
CATTATGTTTCTGATGTTTTTGTTTCCAGAGATGTCCAAGTGAAGCAATAAGCTGGTGCA
TAT
clustalw multiple alignements is not computed in this case