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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8438#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2606 fasta sequence
[CCCGGGCCCCCCCCTCGAGGTGGCCGGGATCGATAAGCTTATTAGGGGCGAGACAAGGGGACCTTTGCTGGTTTACGTATTCACGCGGCGGAAGCTATTCTGTTTTCCCCCAAATGTGCGCTTCCCTCCCTCTTCTGGAACCTTCCGACCGCCACAGTTGTTGCCATCGCCGCCGGCGCCGAATTCCGCCGCGATCTCGCCTGCTCCCCCCAGTGGTAAGAGATTCGATCGGTCTCGTAGTAACTCCGGCTCGCTCGGGCACCTTAGGTGCGCCGGTTCCTGCTCGATTCGAGCTACCGGCTGCCGACTTTGCCGGCGGAACGTAATCGGCTGCGCTGTCGCAGTCGGCGGCGTGCTTAACCGCTCCCGGAATTCTGCTTAGCTATGGCGATGATTCGATGTGCCCTCCTTCGTGCTAGGAAATCTTGTGCTGTGATTTTCAGGCTTCAACTCGTTTGATGCGTCTATTTTTGGAAGTTATTAGCAGTAGCAGTGTGTTCGTGTCCTGCAATTGACCTAGCCTGCGCAATCTGTTGCTTGCTGCTAAATGTGTGGGTTTTTTCCCCCTAGCCATTAAATTCAAACAACTAGTAGACAACTCGTTATTGCCGAAGTACAGTTTGGAATCATTTGGGTTTGACTGTTCGTTCAATAAAAGAAAAAAAGAAGGGTTTCAGAGTGTCTGCTAGCTTTAAATTTTTGCACGGTCAGATTAAGGAAATTTTAATTTTACTTGTTGGTTGTTTTATTTCTCAACCTCCCATTAATTGCTCCCAGTTAAGGTATTTTCAGTTGGAACATTAGTTATGATTTGTACAATCACAGATGGGATTTACAGATGAAATAGTACAAGTAGATGTGTTAGAAAGGCACTTGTTGGCTGGTTTATCACCGGATGATTATAAGGGAATAAGTGAGGATGAGATCCTCTATGATGCATCATTTGAGGCAACTGAAGACAAGTTTGTCAAGTATCAGATTACTTGGTGGATTCTGCTGTCAGTATTGTTGATCTTAGCTTGGGGAGTAGGACTCCTCATGCTGCTTTACTTGCCAATTTGGATATATGTGTGCCGGAAGGACTTCCGCTCAAGGAAGTTGTGTTTGACTCCACATGCTATTGTCTATAAGGTAACTAGGCCTGCCACTTTTCCTTGTTTTGGTGTTTTGAGGAATGAGAAGCATGTTGTCCTTCATTCAGTTTCTGATATTGTTGTCGAACAAGGTTATCTCCAATCACTTTTTGGTATATATTCAATCAGATTTGAGAACATTGGTGTCCGAAAGCCTTCTAGTGATGACATAAAGATAACTGGAATTAGTCATCCACATGATTTCAGGCTGTTCTTGTCCATCTTTTGAATACAAGCAATCTGAATCTCAGTAGAAAAGCTTATGTACACGATGATCAGCAGAGCACGAGTTCTAAACCTATAACTATGTCTTCGGTATGTCTATTTCTTAATGGTACCTTTTAATAGTTTAAACTGTAAAGATCCTTTGCATTTAGCAAGCCCTGGAGCTATGAGATCCAACCTTTCTGAATGTGCGATAGTTATAAAACTAAGAACAAGCATATATTTTGTATATCGAGGTTCTGTTTGTATAATACCTTAGGAAGTATTGTATTGTAGATATATAGCTTCTAACAACATACATGGTTTTGCTAAGTCAAGATTGTATTTCCATATTACCCTATTAAACTTGGCTAATGTTTTCATTTTACAGACCATTTTCACTGATCCCCGTGTTTTGCATGATATATATACAACACATTGAATTTTTCAGGTTCCTCCTCTTGGAGATTTGATACTTGAGAAGCTTGACGAAGTTGAAATCTCTGTGAAGAAAATGCAAACACTGCTAGAAGATGTTGAAAGATCCAGAATGAAGACTTAATATGTTTTGGTAGCCTGGACTATCTTGGAGCGTATGGTGACAAAGTTCTTATTTTTGGGGATATTTTAAGATTGAAACAATATATGGTTGGTGCCCTAGTCGTGGATATCAGCATCACGGTCATGGTTACTGTGGATAGTGGGATTAACCATGGGTTTCATTGGGTCCACAATTAGGCCAACAGATAGCAACATCTTCTCTGGAACCTCACCCTTGACCGTTGACTTGGGCGTACGTGTGCACTGCAGGGCAATGCGGCTGTGATGTGAGCCGGTTTAATTTCCTCTTAGCAATGGTAGGCCCGGATAGACACTGGCCCCACCTGTCAGCGACTCAATGTCAAGCAGTCAAGCCCCAGGTATAGCTTCATGGATTGGAGAATTTGGAGCACTGAAGCTACCCTATCGTTCTCCCAGCTTACATGTGCTGCAAAACCTCTGAATTCAACGGTGATGACTATGAGATAAGTTATAGTGAGTTCATCGTCAGATCATGGAAATCATGTTTTAATCTGTAAGGCTGATTTTTCTTTTGTCATATATTTGCTCTAGTGACTCTACTGTATATATGGTGATTGAATAGGCTAGGGTAGGCTAGGCAGTGATTTTCCATGCATGGTCAATGTAGTGGTTGGCAAAAACAATTGAATTGATGGTCAATGTAGTGGTTGGCAAAAACAATTGAATTGATGGAATTGATTTTGGGAT]
[-] EMBL CA760865 [CCCGGGCCCCCCCCTCGAGGTGGCCGGGATCGATAAGCTTATTAGGGGCGAGACAAGGGGACCTTTGCTGGTTTACGTATTCACGCGGCGGAAGCTATTCTGTTTTCCCCCAAATGTGCGCTTCCCTCCCTCTTCTGGAACCTTCCGACCGCCACAGTTGTTGCCATCGCCGCCGGCGCCGAATTCCGCCGCGATCTCGCCTGCTCCCCCCAGTGGTAAGAGATTCGATCGGTCTCGTAGTAACTCCGGCTCGCTCGGGCACCTTAGGTGCGCCGGTTCCTGCTCGATTCGAGCTACCGGCTGCCGACTTTGCCGGCGGAACGTAATTGGCTGCGCTGTCGCAGTTGGCGGCGTGCTTAACCGCTCCCGGAATTTTGCTTAGCTATGGCGATGATTCGATGTGCCCTCCTTCGTGCTAGGAAATCTTGTGCTGTGATTTTCAGGCTTCAACTCGTTTGATGGGTCTATTTTTGGAAGTTATTAGCAGTAGCAGTGTGTTCGTGTCCTGCAATTGACCTAGCCTGCGCAATCTGTTGCTTGATGATAAATGTGTGGGTTTTTTCCCCCTAGCCATTAAATTCAAACAACTAGTAGACAACTTGTTATTGCCGAAGTACAGTTTGGAATCATTTGGGTTTGACTGTTCGTTCAATAAAAAAAAAAAAAAAaa ]
[+] EMBL AK067552 [ ACGTATTCACGCGGCGGAAGCTTTTCTGTTTTCCCCCAAATTTGCGCTTCCCTCCCTCTTCTCGAACCTTCCGACCGCCACCGTTGTCGCCATCGCCGCCGGCGCCGAATTCCGCCGCGATCTCGCCTGCTCCCCCCAGTGGTAAGAGATTCGATCGGTCTCGTAGTAACTCCGGCTCGCTCGGGCACCTTAGGTGCGCCGGTTCCTGCTCGATTCGAGCTACCGGCTGCCGACTTTGCCGGCGGAACGTAATCGGCTGCGCTGTCGCAGTCGGCGGCGTGCTTAACCGCTCCCGGAATTCTGCTTAGCTATGGCGATGATTCGATGTGCCCTCCTTCGTGCTAGGAAATCTTGTGCTGTGATTTTCAGGCTTCAACTCGTTTGATGCGTCTATTTTTGGAAGTTATTAGCAGTAGCAGTGTGTTCGTGTCCTGCAATTGACCTAGCCTGCGCAATCTGTTGCTTGCTGCTAAATGTGTGGGTTTTTTCCCCCTAGCCATTAAATTCAAACAACTAGTAGACAACTCGTTATTGCCGAAGTACAGTTTGGAATCATTTGGGTTTGACTGTTCGTTCAATAAAAGAAAAAAAGAAGGGTTTCAGAGTGTCTGCTAGCTTTAAATTTTTGCACGGTCAGATTAAGGAAATTTTAATTTTACTTGTTGGTTGTTTTATTTCTCAACCTCCCATTAATTGCTCCCAGTTAAGGTATTTTCAGTTGGAACATTAGTTATGATTTGTACAATCACAGATGGGATTTACAGATGAAATAGTACAAGTAGATGTGTTAGAAAGGCACTTGTTGGCTGGTTTATCACCGGATGATTATAAGGGAATAAGTGAGGATGAGATCCTCTATGATGCATCATTTGAGGCAACTGAAGACAAGTTTGTCAAGTATCAGATTACTTGGTGGATTCTGCTGTCAGTATTGTTGATCTTAGCTTGGGGAGTAGGACTCCTCATGCTGCTTTACTTGCCAATTTGGATATATGTGTGCCGGAAGGACTTCCGCTCAAGGAAGTTGTGTTTGACTCCACATGCTATTGTCTATAAGGTAACTAGGCCTGCCACTTTTCCTTGTTTTGGTGTTTTGAGGAATGAGAAGCATGTTGTCCTTCATTCAGTTTCTGATATTGTTGTCGAACAAGGTTATCTCCAATCACTTTTTGGTATATATTCAATCAGATTTGAGAACATTGGTGTCCGAAAGCCTTCTAGTGATGACATAAAGATAACTGGAATTAGTCATCCACATGATTTCAGGCTGTTCTTGTCCATCTTTTGAATACAAGCAATCTGAATCTCAGTAGAAAAGCTTATGTACACGATGATCAGCAGAGCACGAGTTCTAAACCTATAACTATGTCTTCGGTATGTCTATTTCTTAATGGTACCTTTTAATAGTTTAAACTGTAAAGATCCTTTGCATTTAGCAAGCCCTGGAGCTATGAGATCCAACCTTTCTGAATGTGCGATAGTTATAAAACTAAGAACAAGCATATATTTTGTATATCGAGGTTCTGTTTGTATAATACCTTAGGAAGTATTGTATTGTAGATATATAGCTTCTAACAACATACATGGTTTTGCTAAGTCAAGATTGTATTTCCATATTACCCTATTAAACTTGGCTAATGTTTTCATTTTACAGACCATTTTCACTGATCCCCGTGTTTTGCATGATATATATACAACACATTGAATTTTTCAGGTTCCTCCTCTTGGAGATTTGATACTTGAGAAGCTTGACGAAGTTGAAATCTCTGTGAAGAAAATGCAAACACTGCTAGAAGATGTTGAAAGATCCAGAATGAAGACTTAATATGTTTTGGTAGCCTGGACTATCTTGGAGCGTATGGTGACAAAGTTCTTATTTTTGGGGATATTTTAAGATTGAAACAATATATGGTTGGTGCCCTAGTCGTGGATATCAGCATCACGGTCATGGTTACTGTGGATAGTGGGATTAACCATGGGTTTCATTGGGTCCACAATTAGGCCAACAGATAGCAACATCTTCTCTGGAACCTCACCCTTGACCGTTGACTTGGGCGTACGTGTGCACTGCAGGGCAATGCGGCTGTGATGTGAGCCGGTTTAATTTCCTCTTAGCAATGGTAGGCCCGGATAGACACTGGCCCCACCTGTCAGCGACTCAATGTCAAGCAGTCAAGCCCCAGGTATAGCTTCATGGATTGGAGAATTTGGAGCACTGAAGCTACCCTATCGTTCTCCCAGCTTACATGTGCTGCAAAACCTCTGAATTCAACGGTGATGACTATGAGATAAGTTATAGTGAGTTCATCGTCAGATCATGGAAATCATGTTTTAATCTGTAAGGCTGATTTTTCTTTTGTCATATATTTGCTCTAGTGACTCTACTGTATATATGGTGATTGAATAGGCTAGGGTAGGCTAGGCAGTGATTTTCCATGCATGGTCAATGTAGTGGTTGGCAAAAACAATTGAATTGATGGTCAATGTAGTGGTTGGCAAAAACAATTGAATTGATGGAATTGATTTTGGGAT]
[+] EMBL CB657254 [ GCCGGCGCCGAATTCCGCCGCGATCTCGCCTGCTCCCCCCAGTGGTAAGAGATTCGATCGGTCTCGTAGTAACTCCGGCTCGCTCGGGCACCTTAGGTGCGCCGGTTCCTGCTCGATTCGAGCTACCGGCTGCCGACTTTGCCGGCGGAACGTAATCGGCTGCGCTGTCGCAGTCGGCGGCGTGCTTAACCGCTCCCGGAATTCTGCTTAGCTATGGCGATGATTCGATGTGCCCTCCTTCGTGCTAGGAAATCTTGTGCTGTGATTTTCAGGCTTCAACTCGTTTGATGCGTCTATTTTTGGAAGTTATTAGCAGTAGCAGTGTGTTCGTGTCCTGCAATTGACCTAGCCTGCGCAATCTGTTGCTTGCTGCTAAATGTGTGGGTTTTTTCCCCCTAGCCATTAAATTCAAACAACTAGTAGACAACTCGTTATTGCCGAAGTACAGTTTGGAATCATTTGGGTTTGACTGTTCGTTCAATAAAAGAAAAAAAGAAGGGTTTCAGAGTGTCTGCTAGCTTTAAATTTTTGCACGGTCAGATTAAGGAAATTTTAATTTTACTTGTTGGTTGTTTTATTTCTCAACCTCCCATTAATTGCTCCCAGTTAAGGTATTTTCAGTTGGAACATTAGTTATGATTTGTACAATCACAGATGGGATTTACAGATGAAATAGTACAAGTAGATGTGTTAGAAAGGCACTTGTTGGCTGGTTTATCACCGGATGATTATAAGGGAATAAGTGAGGATGAGATCCTCTATGATGCATCATTTGAGGCAACTGAAGACAAGTTTGTCAAGTATCAGATTACTTGGTGGATTCTGCTGTCAGT ]
consensusID : consensus_8438#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1721 fasta sequence
[CCAAATTTGCGCTTCCCTCCCTCTTCTCGAACCTTCCGACCGCCACCGTTGTCGCCATCGCCGCCGGCGCCGAATTCCGCCGCGATCTCGCCTGCTCCCCCCAGTGGTAAGAGATTCGATCGGTCTCGTAGTAACTCCGGCTCGCTCGGGCACCTTAGGTGCGCCGGTTCCTGCTCGATTCGAGCTACCGGCTGCCGACTTTGCCGGCGGAACGTAATCGGCTGCGCTGTCGCAGTCGGCGGCGTGCTTAACCGCTCCCGGAATTCTGCTTAGCTATGGCGATGATTCGATGTGCCCTCCTTCGTGCTAGGAAATCTTGTGCTGTGATTTTCAGGCTTCAACTCGTTTGATGCGTCTATTTTTGGAAGTTATTAGCAGTAGCAGTGTGTTCGTGTCCTGCAATTGACCTAGCCTGCGCAATCTGTTGCTTGCTGCTAAATGTGTGGGTTTTTTCCCCCTAGCCATTAAATTCAAACAACTAGTAGACAACTCGTTATTGCCGAAGTACAGTTTGGAATCATTTGGGTTTGACTGTTCGTTCAATAAAAGAAAAAAAGAAGGGTTTCAGAGTGTCTGCTAGCTTTAAATTTTTGCACGGTCAGATTAAGGAAATTTTAATTTTACTTGTTGGTTGTTTTATTTCTCAACCTCCCATTAATTGCTCCCAGTTAAGGTATTTTCAGTTGGAACATTAGTTATGATTTGTACAATCACAGATGGGATTTACAGATGAAATAGTACAAGTAGATGTGTTAGGAAGGCACTTGTTGGCTGGTTTATCACCGGATGATTATAAGGGAATAAGTGAGGATGAGATCCTCTATGATGCATCATTTGAGGCAACTGAAGACAAGTTTGTCAAGTATCAGATTACTTGGTGGATTCTGCTGTCAGTATTGTTGATCTTAGCTTGGGGAGTAGGACTCCTCATGCTGCTTTACTTGGCAATTTGGATATATGTGTGCCGGAAGGACTTCCGCTCAAGGAAGTTGTGTTTGACTCCACATGCTATTGTCTATAAGGTAACTAGGCCTGCCACTTTTCCTTGTTTTGGTGTTTTGAGGAATGAGAAGCATGTTGTCCTTCATTCAGTTTCTGATATTGTTGTCGAACAAGGTTATCTCCAATCACTTTTTGGTATATATTCAATCAGATTTGAGAACATTGGTGTCCGAAAGCCTTCTAGTGATGACATAAAGATAACTGGAATTAGTCATCCACATGATTTCAGGAAGGCTGTTCTTGTCCATCTTTTGAATACAAGCAATCTGAATCTCAGTAGAAAAGCTTATGTACACGATGATCAGCAGAGCACGAGTTCTAAACCTATAACTATGTCTTCGGTTCCTCCTCTTGGAGATTTGATACTTGAGAAGCTTGACGAAGTTGAAATCTCTGTGAAGAAAATGCAAACACTGCTAGAAGATGTTGAAAGATCCAGAATGAAGACTTAATATGTTTTGGTAGGTATGCAAAGTTTTAGTTTGCTCTCTACTTTCTCTGTGCTGTGCATCAATGTTGCCCCCATGTCAGTGTTCTGTTTTATTTTCATCTTTTTGCCCTTAATATCTGTTTCACTCAGAGTGTTTCATGAAACGCCATATTTTCAATTTGCCATTCTCTTAATTATTGGACTATTAACCAAACCATCCAAGAGGGATCCCTTTCATGGATTCTATAAATTTCATTGCTAAACTCAATGAAAATAACAAGTTCCACGT]
[+] EMBL AK069292 [CCAAATTTGCGCTTCCCTCCCTCTTCTCGAACCTTCCGACCGCCACCGTTGTCGCCATCGCCGCCGGCGCCGAATTCCGCCGCGATCTCGCCTGCTCCCCCCAGTGGTAAGAGATTCGATCGGTCTCGTAGTAACTCCGGCTCGCTCGGGCACCTTAGGTGCGCCGGTTCCTGCTCGATTCGAGCTACCGGCTGCCGACTTTGCCGGCGGAACGTAATCGGCTGCGCTGTCGCAGTCGGCGGCGTGCTTAACCGCTCCCGGAATTCTGCTTAGCTATGGCGATGATTCGATGTGCCCTCCTTCGTGCTAGGAAATCTTGTGCTGTGATTTTCAGGCTTCAACTCGTTTGATGCGTCTATTTTTGGAAGTTATTAGCAGTAGCAGTGTGTTCGTGTCCTGCAATTGACCTAGCCTGCGCAATCTGTTGCTTGCTGCTAAATGTGTGGGTTTTTTCCCCCTAGCCATTAAATTCAAACAACTAGTAGACAACTCGTTATTGCCGAAGTACAGTTTGGAATCATTTGGGTTTGACTGTTCGTTCAATAAAAGAAAAAAAGAAGGGTTTCAGAGTGTCTGCTAGCTTTAAATTTTTGCACGGTCAGATTAAGGAAATTTTAATTTTACTTGTTGGTTGTTTTATTTCTCAACCTCCCATTAATTGCTCCCAGTTAAGGTATTTTCAGTTGGAACATTAGTTATGATTTGTACAATCACAGATGGGATTTACAGATGAAATAGTACAAGTAGATGTGTTAGGAAGGCACTTGTTGGCTGGTTTATCACCGGATGATTATAAGGGAATAAGTGAGGATGAGATCCTCTATGATGCATCATTTGAGGCAACTGAAGACAAGTTTGTCAAGTATCAGATTACTTGGTGGATTCTGCTGTCAGTATTGTTGATCTTAGCTTGGGGAGTAGGACTCCTCATGCTGCTTTACTTGGCAATTTGGATATATGTGTGCCGGAAGGACTTCCGCTCAAGGAAGTTGTGTTTGACTCCACATGCTATTGTCTATAAGGTAACTAGGCCTGCCACTTTTCCTTGTTTTGGTGTTTTGAGGAATGAGAAGCATGTTGTCCTTCATTCAGTTTCTGATATTGTTGTCGAACAAGGTTATCTCCAATCACTTTTTGGTATATATTCAATCAGATTTGAGAACATTGGTGTCCGAAAGCCTTCTAGTGATGACATAAAGATAACTGGAATTAGTCATCCACATGATTTCAGGAAGGCTGTTCTTGTCCATCTTTTGAATACAAGCAATCTGAATCTCAGTAGAAAAGCTTATGTACACGATGATCAGCAGAGCACGAGTTCTAAACCTATAACTATGTCTTCGGTTCCTCCTCTTGGAGATTTGATACTTGAGAAGCTTGACGAAGTTGAAATCTCTGTGAAGAAAATGCAAACACTGCTAGAAGATGTTGAAAGATCCAGAATGAAGACTTAATATGTTTTGGTAGGTATGCAAAGTTTTAGTTTGCTCTCTACTTTCTCTGTGCTGTGCATCAATGTTGCCCCCATGTCAGTGTTCTGTTTTATTTTCATCTTTTTGCCCTTAATATCTGTTTCACTCAGAGTGTTTCATGAAACGCCATATTTTCAATTTGCCATTCTCTTAATTATTGGACTATTAACCAAACCATCCAAGAGGGATCCCTTTCATGGATTCTATAAATTTCATTGCTAAACTCAATGAAAATAACAAGTTCCACGT]
consensusID : consensus_8438#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 768 fasta sequence
[GGATGAGATCCTCTATGATGCATCATTTGAGGCAACTGAAGACAAGTTTGTCAAGTATCAGATTACTTGGTGGATTCTGCTGTCAGTATTGTTGATCTTAGCTTGGGGAGTAGGACTCCTCATGCTGCTTTACTTGCCAATTTGGATATATGTGTGCCGGAAGGACTTCCGCTCAAGGAAGTTGTGTTTGACTCCACATGCTATTGTCTATAAGGTAACTAGGCCTGCCACTTTTCCTTGTTTTGGTGTTTTGAGGAATGAGAAGCATGTTGTCCTTCATTCAGTTTCTGATATTGTTGTCGAACAAGATTTGAGAACATTGGTGTCCGAAAGCCTTCTAGTGATGACATAAAGATAACTGGAATTAGTCATCCACATGATTTCAGGAAGGTACTAAACATTTTGATTTATCTATCTCAGTCTATCTCGAGTTTTTGTCTCATTCAGACATGCTTTCTTCAGGCTGTTCTTGTCCATCTTTTGAATACAAGCAATCTGAATCTCAGTAGAAAAGCTTATGTACACGATGATCAGCAGAGCACGAGTTCTAAACCTATAACTATGTCTTCGGTTCCTCCTCTTGGAGATTTGATACTTGAGAAGCTTGACGAAGTTGAAATCTCTGTGAAGAAAATGCAAACACTGCTAGAAGATGTTGAAAGATCCAGAATGAAGACTTAATATGTTTTGGTAGGTATGCAAAGTTTTAGTTTGCTCTCTACTTTCTCTGTGCTGTGCATCAATGTTGCCCCCATGTCAGTGTTCTGT]
[-] EMBL CB657255 [GGATGAGATCCTCTATGATGCATCATTTGAGGCAACTGAAGACAAGTTTGTCAAGTATCAGATTACTTGGTGGATTCTGCTGTCAGTATTGTTGATCTTAGCTTGGGGAGTAGGACTCCTCATGCTGCTTTACTTGCCAATTTGGATATATGTGTGCCGGAAGGACTTCCGCTCAAGGAAGTTGTGTTTGACTCCACATGCTATTGTCTATAAGGTAACTAGGCCTGCCACTTTTCCTTGTTTTGGTGTTTTGAGGAATGAGAAGCATGTTGTCCTTCATTCAGTTTCTGATATTGTTGTCGAACAAGATTTGAGAACATTGGTGTCCGAAAGCCTTCTAGTGATGACATAAAGATAACTGGAATTAGTCATCCACATGATTTCAGGAAGGTACTAAACATTTTGATTTATCTATCTCAGTCTATCTCGAGTTTTTGTCTCATTCAGACATGCTTTCTTCAGGCTGTTCTTGTCCATCTTTTGAATACAAGCAATCTGAATCTCAGTAGAAAAGCTTATGTACACGATGATCAGCAGAGCACGAGTTCTAAACCTATAACTATGTCTTCGGTTCCTCCTCTTGGAGATTTGATACTTGAGAAGCTTGACGAAGTTGAAATCTCTGTGAAGAAAATGCAAACACTGCTAGAAGATGTTGAAAGATCCAGAATGAAGACTTAATATGTTTTGGTAGGTATGCAAAGTTTTAGTTTGCTCTCTACTTTCTCTGTGCTGTGCATCAATGTTGCCCCCATGTCAGTGTTCTGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8438#1 ------------------------------------------------------------
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 CCCGGGCCCCCCCCTCGAGGTGGCCGGGATCGATAAGCTTATTAGGGGCGAGACAAGGGG 60
consensus_8438#1 -------------------------------------------------CCAAATTTGCG 11
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 ACCTTTGCTGGTTTACGTATTCACGCGGCGGAAGCTATTCTGTTTTCCCCCAAATGTGCG 120
consensus_8438#1 CTTCCCTCCCTCTTCTCGAACCTTCCGACCGCCACCGTTGTCGCCATCGCCGCCGGCGCC 71
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 CTTCCCTCCCTCTTCTGGAACCTTCCGACCGCCACAGTTGTTGCCATCGCCGCCGGCGCC 180
consensus_8438#1 GAATTCCGCCGCGATCTCGCCTGCTCCCCCCAGTGGTAAGAGATTCGATCGGTCTCGTAG 131
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 GAATTCCGCCGCGATCTCGCCTGCTCCCCCCAGTGGTAAGAGATTCGATCGGTCTCGTAG 240
consensus_8438#1 TAACTCCGGCTCGCTCGGGCACCTTAGGTGCGCCGGTTCCTGCTCGATTCGAGCTACCGG 191
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 TAACTCCGGCTCGCTCGGGCACCTTAGGTGCGCCGGTTCCTGCTCGATTCGAGCTACCGG 300
consensus_8438#1 CTGCCGACTTTGCCGGCGGAACGTAATCGGCTGCGCTGTCGCAGTCGGCGGCGTGCTTAA 251
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 CTGCCGACTTTGCCGGCGGAACGTAATCGGCTGCGCTGTCGCAGTCGGCGGCGTGCTTAA 360
consensus_8438#1 CCGCTCCCGGAATTCTGCTTAGCTATGGCGATGATTCGATGTGCCCTCCTTCGTGCTAGG 311
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 CCGCTCCCGGAATTCTGCTTAGCTATGGCGATGATTCGATGTGCCCTCCTTCGTGCTAGG 420
consensus_8438#1 AAATCTTGTGCTGTGATTTTCAGGCTTCAACTCGTTTGATGCGTCTATTTTTGGAAGTTA 371
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 AAATCTTGTGCTGTGATTTTCAGGCTTCAACTCGTTTGATGCGTCTATTTTTGGAAGTTA 480
consensus_8438#1 TTAGCAGTAGCAGTGTGTTCGTGTCCTGCAATTGACCTAGCCTGCGCAATCTGTTGCTTG 431
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 TTAGCAGTAGCAGTGTGTTCGTGTCCTGCAATTGACCTAGCCTGCGCAATCTGTTGCTTG 540
consensus_8438#1 CTGCTAAATGTGTGGGTTTTTTCCCCCTAGCCATTAAATTCAAACAACTAGTAGACAACT 491
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 CTGCTAAATGTGTGGGTTTTTTCCCCCTAGCCATTAAATTCAAACAACTAGTAGACAACT 600
consensus_8438#1 CGTTATTGCCGAAGTACAGTTTGGAATCATTTGGGTTTGACTGTTCGTTCAATAAAAGAA 551
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 CGTTATTGCCGAAGTACAGTTTGGAATCATTTGGGTTTGACTGTTCGTTCAATAAAAGAA 660
consensus_8438#1 AAAAAGAAGGGTTTCAGAGTGTCTGCTAGCTTTAAATTTTTGCACGGTCAGATTAAGGAA 611
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 AAAAAGAAGGGTTTCAGAGTGTCTGCTAGCTTTAAATTTTTGCACGGTCAGATTAAGGAA 720
consensus_8438#1 ATTTTAATTTTACTTGTTGGTTGTTTTATTTCTCAACCTCCCATTAATTGCTCCCAGTTA 671
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 ATTTTAATTTTACTTGTTGGTTGTTTTATTTCTCAACCTCCCATTAATTGCTCCCAGTTA 780
consensus_8438#1 AGGTATTTTCAGTTGGAACATTAGTTATGATTTGTACAATCACAGATGGGATTTACAGAT 731
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 AGGTATTTTCAGTTGGAACATTAGTTATGATTTGTACAATCACAGATGGGATTTACAGAT 840
consensus_8438#1 GAAATAGTACAAGTAGATGTGTTAGGAAGGCACTTGTTGGCTGGTTTATCACCGGATGAT 791
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 GAAATAGTACAAGTAGATGTGTTAGAAAGGCACTTGTTGGCTGGTTTATCACCGGATGAT 900
consensus_8438#1 TATAAGGGAATAAGTGAGGATGAGATCCTCTATGATGCATCATTTGAGGCAACTGAAGAC 851
consensus_8438#2 -----------------GGATGAGATCCTCTATGATGCATCATTTGAGGCAACTGAAGAC 43
consensus_8438#0 TATAAGGGAATAAGTGAGGATGAGATCCTCTATGATGCATCATTTGAGGCAACTGAAGAC 960
*******************************************
consensus_8438#1 AAGTTTGTCAAGTATCAGATTACTTGGTGGATTCTGCTGTCAGTATTGTTGATCTTAGCT 911
consensus_8438#2 AAGTTTGTCAAGTATCAGATTACTTGGTGGATTCTGCTGTCAGTATTGTTGATCTTAGCT 103
consensus_8438#0 AAGTTTGTCAAGTATCAGATTACTTGGTGGATTCTGCTGTCAGTATTGTTGATCTTAGCT 1020
************************************************************
consensus_8438#1 TGGGGAGTAGGACTCCTCATGCTGCTTTACTTGGCAATTTGGATATATGTGTGCCGGAAG 971
consensus_8438#2 TGGGGAGTAGGACTCCTCATGCTGCTTTACTTGCCAATTTGGATATATGTGTGCCGGAAG 163
consensus_8438#0 TGGGGAGTAGGACTCCTCATGCTGCTTTACTTGCCAATTTGGATATATGTGTGCCGGAAG 1080
********************************* **************************
consensus_8438#1 GACTTCCGCTCAAGGAAGTTGTGTTTGACTCCACATGCTATTGTCTATAAGGTAACTAGG 1031
consensus_8438#2 GACTTCCGCTCAAGGAAGTTGTGTTTGACTCCACATGCTATTGTCTATAAGGTAACTAGG 223
consensus_8438#0 GACTTCCGCTCAAGGAAGTTGTGTTTGACTCCACATGCTATTGTCTATAAGGTAACTAGG 1140
************************************************************
consensus_8438#1 CCTGCCACTTTTCCTTGTTTTGGTGTTTTGAGGAATGAGAAGCATGTTGTCCTTCATTCA 1091
consensus_8438#2 CCTGCCACTTTTCCTTGTTTTGGTGTTTTGAGGAATGAGAAGCATGTTGTCCTTCATTCA 283
consensus_8438#0 CCTGCCACTTTTCCTTGTTTTGGTGTTTTGAGGAATGAGAAGCATGTTGTCCTTCATTCA 1200
************************************************************
consensus_8438#1 GTTTCTGATATTGTTGTCGAACAAGGTT-----------ATCTCCAATCACTTTTTGGT- 1139
consensus_8438#2 GTTTCTGATATTGTTGTCGAACAAGATTTGAGAACATTGGTGTCCGAAAGCCTTCTAGTG 343
consensus_8438#0 GTTTCTGATATTGTTGTCGAACAAGGTT-----------ATCTCCAATCACTTTTTGGT- 1248
************************* ** * *** * * ** * **
consensus_8438#1 -----ATATATTCAATCAGATTTGAGAACAT---TGGTGTCCGAAAG--------CCTTC 1183
consensus_8438#2 ATGACATAAAGATAACTGGAATTAGTCATCCACATGATTTCAGGAAGGTACTAAACATTT 403
consensus_8438#0 -----ATATATTCAATCAGATTTGAGAACAT---TGGTGTCCGAAAG--------CCTTC 1292
*** * ** ** ** * ** * ** * *** * **
consensus_8438#1 TAG--TGATGACATAAAGATAACTGGAATTA----GTCATCC--ACATGATTTCAGGAAG 1235
consensus_8438#2 TGATTTATCTATCTCAGTCTATCTCGAGTTTTTGTCTCATTCAGACATGCTTTCTTCA-G 462
consensus_8438#0 TAG--TGATGACATAAAGATAACTGGAATTA----GTCATCC--ACATGATTTCA----G 1340
* * * * * ** ** ** ** **** * ***** **** *
consensus_8438#1 GCTGTTCTTGTCCATCTTTTGAATACAAGCAATCTGAATCTCAGTAGAAAAGCTTATGTA 1295
consensus_8438#2 GCTGTTCTTGTCCATCTTTTGAATACAAGCAATCTGAATCTCAGTAGAAAAGCTTATGTA 522
consensus_8438#0 GCTGTTCTTGTCCATCTTTTGAATACAAGCAATCTGAATCTCAGTAGAAAAGCTTATGTA 1400
************************************************************
consensus_8438#1 CACGATGATCAGCAGAGCACGAGTTCTAAACCTATAACTATGTCTTCGGTTCCTCCTCTT 1355
consensus_8438#2 CACGATGATCAGCAGAGCACGAGTTCTAAACCTATAACTATGTCTTCGGTTCCTCCTCTT 582
consensus_8438#0 CACGATGATCAGCAGAGCACGAGTTCTAAACCTATAACTATGTCTTCGGTATGTCTATTT 1460
************************************************** ** **
consensus_8438#1 GGAGATTTGATACTTGAGAAGCTTGACGAAGTTGAAATCTCT---GTGAAGAAAATGCAA 1412
consensus_8438#2 GGAGATTTGATACTTGAGAAGCTTGACGAAGTTGAAATCTCT---GTGAAGAAAATGCAA 639
consensus_8438#0 CTTAATGGTACCTTTTAATAGTTTAA-ACTGTAAAGATCCTTTGCATTTAGCAAGCCCTG 1519
** * ** * ** ** * ** * *** * * ** ** *
consensus_8438#1 ACACTGCTAGA------------AGATGT-TGAAAGATCCAGAATGAAGACTTAATATGT 1459
consensus_8438#2 ACACTGCTAGA------------AGATGT-TGAAAGATCCAGAATGAAGACTTAATATGT 686
consensus_8438#0 GAGCTATGAGATCCAACCTTTCTGAATGTGCGATAGTTATAAAACTAAGAACAAGCATAT 1579
** *** **** ** ** * * ** **** * ** *
consensus_8438#1 TTTGGTAGGTATGCAAAGTTTTAGTTTGCTCTCTACTTT------CTCTGTGCTGTGCAT 1513
consensus_8438#2 TTTGGTAGGTATGCAAAGTTTTAGTTTGCTCTCTACTTT------CTCTGTGCTGTGCAT 740
consensus_8438#0 ATTT---TGTATATCGAGGTTCTGTTTGTATAATACCTTAGGAAGTATTGTATTGTAGAT 1636
** **** ** ** ***** *** ** *** *** **
consensus_8438#1 CAATGTTGCCC--CCATGT-CAGTGTTCTGTTTTATTTTCATCTTTTTGCCCTTAATATC 1570
consensus_8438#2 CAATGTTGCCC--CCATGT-CAGTGTTCTGT----------------------------- 768
consensus_8438#0 ATATAGCTTCTAACAACATACATGGTTTTGCTAAGTCAAGATTGTATTTCCATATTACCC 1696
** * * * * ** *** **
consensus_8438#1 TGTTTCACTCAGAGTGTTTCATGAAACGCCATATTTTCAATTTGCCATTCTCTTAATTAT 1630
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 TATTAAACTTGGCTAATGTTTTCATTTTACAGACCATTTTCACTGATCCCCGTGTTTTGC 1756
consensus_8438#1 TGGACTATTAACCAAACCATCCAAGAGGGATCCCTTTCATGGATTCTATAAATTTCATTG 1690
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 ATGATATATATACAACACATTGAATTTTTCAGGTTCCTCCTCTTGGAGATTTGATACTTG 1816
consensus_8438#1 CTAAACTCAATGAAAATAACAAGTTCCACGT----------------------------- 1721
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 AGAAGCTTGACGAAGTTGAAATCTCTGTGAAGAAAATGCAAACACTGCTAGAAGATGTTG 1876
consensus_8438#1 ------------------------------------------------------------
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 AAAGATCCAGAATGAAGACTTAATATGTTTTGGTAGCCTGGACTATCTTGGAGCGTATGG 1936
consensus_8438#1 ------------------------------------------------------------
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 TGACAAAGTTCTTATTTTTGGGGATATTTTAAGATTGAAACAATATATGGTTGGTGCCCT 1996
consensus_8438#1 ------------------------------------------------------------
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 AGTCGTGGATATCAGCATCACGGTCATGGTTACTGTGGATAGTGGGATTAACCATGGGTT 2056
consensus_8438#1 ------------------------------------------------------------
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 TCATTGGGTCCACAATTAGGCCAACAGATAGCAACATCTTCTCTGGAACCTCACCCTTGA 2116
consensus_8438#1 ------------------------------------------------------------
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 CCGTTGACTTGGGCGTACGTGTGCACTGCAGGGCAATGCGGCTGTGATGTGAGCCGGTTT 2176
consensus_8438#1 ------------------------------------------------------------
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 AATTTCCTCTTAGCAATGGTAGGCCCGGATAGACACTGGCCCCACCTGTCAGCGACTCAA 2236
consensus_8438#1 ------------------------------------------------------------
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 TGTCAAGCAGTCAAGCCCCAGGTATAGCTTCATGGATTGGAGAATTTGGAGCACTGAAGC 2296
consensus_8438#1 ------------------------------------------------------------
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 TACCCTATCGTTCTCCCAGCTTACATGTGCTGCAAAACCTCTGAATTCAACGGTGATGAC 2356
consensus_8438#1 ------------------------------------------------------------
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 TATGAGATAAGTTATAGTGAGTTCATCGTCAGATCATGGAAATCATGTTTTAATCTGTAA 2416
consensus_8438#1 ------------------------------------------------------------
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 GGCTGATTTTTCTTTTGTCATATATTTGCTCTAGTGACTCTACTGTATATATGGTGATTG 2476
consensus_8438#1 ------------------------------------------------------------
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 AATAGGCTAGGGTAGGCTAGGCAGTGATTTTCCATGCATGGTCAATGTAGTGGTTGGCAA 2536
consensus_8438#1 ------------------------------------------------------------
consensus_8438#2 ------------------------------------------------------------
consensus_8438#0 AAACAATTGAATTGATGGTCAATGTAGTGGTTGGCAAAAACAATTGAATTGATGGAATTG 2596
consensus_8438#1 ----------
consensus_8438#2 ----------
consensus_8438#0 ATTTTGGGAT 2606
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||