|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8454#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 3048 fasta sequence
[TTTTCCTAAATCCTAATCCCTTCGCTTGTCGCCGATGAGCGCGGCGACGGAGGAGGGGCGGCCGGACGGCGAGGAGGATTCGCCGCGCGCGGAGGCGTTCCTGGAGATCCTCGGCCGGGTCCAGCCGGGGGATGCGGAAGCGGAGCTCTCCTCCTGCGGCATCGGCCCGACGGCGGAGGTCGCGGAGCAGGTGCTCAGGTCCCGCGTCTGCTACTCCCGCCCCAAATCCGCCGTCCGCTTCTTCGTCTGGTCGGGCCGGTCGGTGAAGCACACCGGCTACGCCTGGAACCTCCTCGTCGACATCCTCGGCAAGGCCGACATGGAGGAGCCCATGTGGGACGCCGTCCGCACCATGAACAAGGAGGGCGGCGGCCTCGTCACCGTCGCCACCTTCGCCTCCATCTTCTCCTCCTACTGCGCCAGCGGCAACCTCAGGAAGGCCGTCGAGGCCTTCGACGTCATGGGGAAGTACGGCGTGGAGCCGGACGCCGTCGCCCTCAACTCCCTCCTCTCCGCCATGTGCCGCGGGGAGGGCCGCGCGCAGGCGGCGCAGGACCTGTTCGAGCGCACCAAGGCCACCGTCGCGCCCGACGCGGACACCTTCGGGATTCTCCTCGAGGCGTGGGAGAAAGAGGGGAACGCCCAGCGCGCCAAGAGCACCTTCGGCGAGATGATTGTCCGCGTCGGCTGGGACGCCGGCAACATGCCCGCGTACGACGCCTTCCTCTCCACGCTTGTGCGCGGGGATCAATTCGGCGAGGCGCTCAAGTTCCTTCAGGTGATGCGGTCCAAGGGCTGCCTCCCGGGGCTCAAGTTCTTCGCCAGGGCAATCGACCTTGTCGTCCGCAAGCGCGACTATGCGAACTCTTTGGCCATTTGGCAAATGATGATCTCGGATGCTGGCCTTGTACCAAACCTCCCCATGTACAATGCCATGATCGACCTCTGTTGCAGTGTTGGTGATACCGACTACGCCCTCCGCATGCTCGACGAAATGCCCTTCAATGGCGTCTTTGCAGATTTTATCACGTACAATGCCATACTTGAAGGGCTCATCAAGCAGCGCAAGGCTCGTGAGGCTGAGGCTTTCCTCGCAGAGATGAGCAAGAACGAGCAGCTGCCCTCCCCAACCAATTGTGCTGCTGCTATCAGCATGTTCTCTAAGGAGTTTAACCCGTCAGCAGCAATCGATGTGTGGCACTGCATTGTGGAGCACCAGATTACTCCGGCTGATGAGTCAGCCAGAGAACTAATAGTTGGGTTGCTTGATTTTGGCAGGTTTGCTGAGGTGAAGAAATATACTGATGAAATGCTTGACATGGGAATTGAGTTACCTCAGTCAACCATTGATAATATGAAGCGCACATTTGATAAGGTTGGCAAGCACCACACATATGACCATATTGCTAGAAGGCCAAAGCGGTGTTAGCTATACATCACCAATTTAATCATAATAGGTATGCCTTCTTTCATATGGGTGTTTTTGGCTGTGTCAGTGAATGCCATGAATTGCATGAATTCATCTATCATCTTGACCTTATGCCATTCACTAATAAGTCCTCATGACTTGCTAGTAAGCTACTTGGAGTGAATGTCATCAGTTGCGTGAATTCACCAATTATCTTGACCTTATGACATTCACTAATTAGTCCTCATGACTTGCAATTAAGCTACTTGGAATTGGAGGTTTTATCCTGGACTACTAGTTTGGTTCCCTATGTTCTTGCATGAGCCAATTCCTTGTTCCTCTTGGCTGTCTTGCTCTCCTTGTCTTGTTAATATTGGAGTACCTTTTCTTGGCACGGTGCACAAGGCCACTAAAAATGACTATTCCACTGACTATTTATGTGCGCTACTTTTATGCATTTTGATAACTTTCCTTGCCCCTTTGGAAGACACTGGACATCTATGATTCCATCTTCCTTTACAATAGGATTCATAGTGATGTTGTATGGAAATGTAGCTGTTTGGTGCTCTTCAATGGAGGAAGAACTCCTAACTCATATCTTGGGTATCTAGCGGACATGCACTTCTATCACAACAACTCATATCTTGGGTTATCTAGCGGACATGCACTTCTCTTACAACAACTCCTTGTCGATGTCTACACTACTCACCCCACTTTAAGATAGATATCTTGTGGTGGCTGTCGGGGTTTACAGACTTATGTGCCCTCGCACTAAAGTTGATGCAACCCATAAGTCCTGATTGCAGATGGACACATTGCATTGACTATCGTCTATCTTCCAGGACCTAACTATTACACATTGGCTATATGTCTAGGCTGTGGTCTCCCCTCATCTAATTATTGAGTGAGTCCCTTGTCCCAAATTACAATGGCCTTACAGATGTGTTTTGTGCTTAACCTTTTTCTCTCTGATCACTTCCATCATTGTAGGTGTCGTGGGCTTCTTAGTGTTTAAGCCAAGTAAAATGTGATTCAATCTTCTTTGCTCAAATCTTTGATTCCTGGTACAACATAGTCGAGATAAAACATAATGTTGTTCACTTTAGCCTGTTTGGGTTTTGCAAAACTCCATAGATATGCAGAAGAGAAATGCTATCCCACTCCATCATGGCTTGACACTTCTTAGTCTGAACTCTGTAGAATTTTAAGGATTGCCTTCTAATTTTGGCATATTATGGACTCGAGTTCAAGATGTGGTGTACTGCGTGTCATCTTTTTTCCCTTACCAAGTTACCCCTGCTATATAGCTTCTCCAAATGCTTTTGATCACTCTTTGAGAAAGGCATGTTGGAAAACAGAAACATGTGGTCAGTACTGATCACACATTGCACAAGATGGTACTGTTTCTTCTTCGTTGAACCTAGATTATCTTCTTTAGTGTTTCTCTGGAACAACAAACCTCTTGAATTGTTAAAGATTCAGTAGCATTGAGTAAAACTACAACAGGTTATGTCTACTGTTACCACTGTTTGATGCACTTCCATCCTATAGAAATCAATAGCTAATGTTTCTATTCATGACGTGTCTACCAGGGAGGATTTACATAATTAGAGTCGGGGACTTTTTTGGGGCCTTTTGTG]
[+] EMBL AK068793 [TTTTCCTAAATCCTAATCCCTTCGCTTGTCGCCGATGAGCGCGGCGACGGAGGAGGGGCGGCCGGACGGCGAGGAGGATTCGCCGCGCGCGGAGGCGTTCCTGGAGATCCTCGGCCGGGTCCAGCCGGGGGATGCGGAAGCGGAGCTCTCCTCCTGCGGCATCGGCCCGACGGCGGAGGTCGCGGAGCAGGTGCTCAGGTCCCGCGTCTGCTACTCCCGCCCCAAATCCGCCGTCCGCTTCTTCGTCTGGTCGGGCCGGTCGGTGAAGCACACCGGCTACGCCTGGAACCTCCTCGTCGACATCCTCGGCAAGGCCGACATGGAGGAGCCCATGTGGGACGCCGTCCGCACCATGAACAAGGAGGGCGGCGGCCTCGTCACCGTCGCCACCTTCGCCTCCATCTTCTCCTCCTACTGCGCCAGCGGCAACCTCAGGAAGGCCGTCGAGGCCTTCGACGTCATGGGGAAGTACGGCGTGGAGCCGGACGCCGTCGCCCTCAACTCCCTCCTCTCCGCCATGTGCCGCGGGGAGGGCCGCGCGCAGGCGGCGCAGGACCTGTTCGAGCGCACCAAGGCCACCGTCGCGCCCGACGCGGACACCTTCGGGATTCTCCTCGAGGCGTGGGAGAAAGAGGGGAACGCCCAGCGCGCCAAGAGCACCTTCGGCGAGATGATTGTCCGCGTCGGCTGGGACGCCGGCAACATGCCCGCGTACGACGCCTTCCTCTCCACGCTTGTGCGCGGGGATCAATTCGGCGAGGCGCTCAAGTTCCTTCAGGTGATGCGGTCCAAGGGCTGCCTCCCGGGGCTCAAGTTCTTCGCCAGGGCAATCGACCTTGTCGTCCGCAAGCGCGACTATGCGAACTCTTTGGCCATTTGGCAAATGATGATCTCGGATGCTGGCCTTGTACCAAACCTCCCCATGTACAATGCCATGATCGACCTCTGTTGCAGTGTTGGTGATACCGACTACGCCCTCCGCATGCTCGACGAAATGCCCTTCAATGGCGTCTTTGCAGATTTTATCACGTACAATGCCATACTTGAAGGGCTCATCAAGCAGCGCAAGGCTCGTGAGGCTGAGGCTTTCCTCGCAGAGATGAGCAAGAACGAGCAGCTGCCCTCCCCAACCAATTGTGCTGCTGCTATCAGCATGTTCTCTAAGGAGTTTAACCCGTCAGCAGCAATCGATGTGTGGCACTGCATTGTGGAGCACCAGATTACTCCGGCTGATGAGTCAGCCAGAGAACTAATAGTTGGGTTGCTTGATTTTGGCAGGTTTGCTGAGGTGAAGAAATATACTGATGAAATGCTTGACATGGGAATTGAGTTACCTCAGTCAACCATTGATAATATGAAGCGCACATTTGATAAGGTTGGCAAGCACCACACATATGACCATATTGCTAGAAGGCCAAAGCGGTGTTAGCTATACATCACCAATTTAATCATAATAGGTATGCCTTCTTTCATATGGGTGTTTTTGGCTGTGTCAGTGAATGCCATGAATTGCATGAATTCATCTATCATCTTGACCTTATGCCATTCACTAATAAGTCCTCATGACTTGCTAGTAAGCTACTTGGAGTGAATGTCATCAGTTGCGTGAATTCACCAATTATCTTGACCTTATGACATTCACTAATTAGTCCTCATGACTTGCAATTAAGCTACTTGGAATTGGAGGTTTTATCCTGGACTACTAGTTTGGTTCCCTATGTTCTTGCATGAGCCAATTCCTTGTTCCTCTTGGCTGTCTTGCTCTCCTTGTCTTGTTAATATTGGAGTACCTTTTCTTGGCACGGTGCACAAGGCCACTAAAAATGACTATTCCACTGACTATTTATGTGCGCTACTTTTATGCATTTTGATAACTTTCCTTGCCCCTTTGGAAGACACTGGACATCTATGATTCCATCTTCCTTTACAATAGGATTCATAGTGATGTTGTATGGAAATGTAGCTGTTTGGTGCTCTTCAATGGAGGAAGAACTCCTAACTCATATCTTGGGTATCTAGCGGACATGCACTTCTATCACAACAACTCATATCTTGGGTTATCTAGCGGACATGCACTTCTCTTACAACAACTCCTTGTCGATGTCTACACTACTCACCCCACTTTAAGATAGATATCTTGTGGTGGCTGTCGGGGTTTACAGACTTATGTGCCCTCGCACTAAAGTTGATGCAACCCATAAGTCCTGATTGCAGATGGACACATTGCATTGACTATCGTCTATCTTCCAGGACCTAACTATTACACATTGGCTATATGTCTAGGCTGTGGTCTCCCCTCATCTAATTATTGAGTGAGTCCCTTGTCCCAAATTACAATGGCCTTACAGATGTGTTTTGTGCTTAACCTTTTTCTCTCTGATCACTTCCATCATTGTAGGTGTCGTGGGCTTCTTAGTGTTTAAGCCAAGTAAAATGTGATTCAATCTTCTTTGCTCAAATCTTTGATTCCTGGTACAACATAGTCGAGATAAAACATAATGTTGTTCACTTTAGCCTGTTTGGGTTTTGCAAAACTCCATAGATATGCAGAAGAGAAATGCTATCCCACTCCATCATGGCTTGACACTTCTTAGTCTGAACTCTGTAGAATTTTAAGGATTGCCTTCTAATTTTGGCATATTATGGACTCGAGTTCAAGATGTGGTGTACTGCGTGTCATCTTTTTTCCCTTACCAAGTTACCCCTGCTATATAGCTTCTCCAAATGCTTTTGATCACTCTTTGAGAAAGGCATGTTGGAAAACAGAAACATGTGGTCAGTACTGATCACACATTGCACAAGATGGTACTGTTTCTTCTTCGTTGAACCTAGATTATCTTCTTTAGTGTTTCTCTGGAACAACAAACCTCTTGAATTGTTAAAGATTCAGTAGCATTGAGTAAAACTACAACAGGTTATGTCTACTGTTACCACTGTTTGATGCACTTCCATCCTATAGAAATCAATAGCTAATGTTTCTATTCATGACGTGTCTACCAGGGAGGATTTACATAATTAGAGTCGGGGACTTTTTTGGGGCCTTTTGTG]
[+] EMBL AK105606 [ TGGCCTTGTACCAAACCTCCCCATGTACAATGCCATGATCGACCTCTGTTGCAGTGTTGGTGATACCGACTACGCCCTCCGCATGCTCGACGAAATGCCCTTCAATGGCGTCTTTGCAGATTTTATCACGTACAATGCCATACTTGAAGGGCTCATCAAGCAGCGCAAGGCTCGTGAGGCTGAGGCTTTCCTCGCAGAGATGAGCAAGAACGAGCAGCTGCCCTCCCCAACCAATTGTGCTGCTGCTATCAGCATGTTCTCTAAGGAGTTTAACCCGTCAGCAGCAATCGATGTGTGGCACTGCATTGTGGAGCACCAGATTACTCCGGCCGATGAGTCAGCCAGAGAACTAATAGTTGGGTTGCTTGATTTTGGCAGGTTTGCTGAGGTGAAGAAATATACTGATGAAATGCTTGACATGGGAATTGAGTTACCTCAGTCAACCATTGATAATATGAAGCGCACATTTGATAAGGTTGGCAAGCACCACACATATGACCATATTGCTAGAAGGCCAAAGCGGTGTTAGCTATACATCACCAATTTAATCATAATAGGTATGCCTTCTTTCATATGGGTGTTTTTGGCTGTGTCAGTGAATGCCATGAATTGCATGAATTCATCTATCATCTTGACCTTATGCCATTCACTAATAAGTCCTCATGACTTGCTAGTAAGCTACTTGGAGTGAATGTCATCAGTTGCGTGAATTCACCAATTATCTTGACCTTATGACATTCACTAATTAGTCCTCATGACTTGCAATTAAGCTACTTGGAATTGGAGGTTTTATCCTGGACTACTAGTTTGGTTCCCTATGTTCTTGCATGAGCCAATTCCTTGTTCCTCTTGGCTGTCTTGCTCTCCTTGTCTTGTTAATATTGGAGTACCTTTTCTTGGCACGGTGCACAAGGCCACTAAAAATGACTATTCCACTGACTATTTATGTGCGCTACTTTTATGCATTTTGATAACTTTCCTTGCCCCTTTGGAAGACACTGGACATCTATGATTCCATCTTCCTTTACAATAGGATTCATAGTGATGTTGTATGGAAATGTAGCTGTTTGGTGCTCTTCAATGGAGGAAGAACTCCTAACTCATATCTTGGGTATCTAGCGGACATGCACTTCTATCACAACAACTCATATCTTGGGTTATCTAGCGGACATGCACTTCTCTTACAACAACTCCTTGTCGATGTCTACACTACTCACCCCACTTTAAGATAGATATCTTGTGGTGGCTGTCGGGGTTTACAGACTTATGTGCCCTCGCACTAAAGTTGATGCAACCCATAAGTCCTGATTGCAGATGGACACATTGCATTGACTATCGTCTATCTTCCAGGACCTAACTATTACACATTGGCTATATGTCTAGGCTGTGGTCTCCCCTCATCTAATTATTGAGTGAGTCCCTTGTCCCAAATTACAATGGCCTTACAGATGTGTTTTGTGCTTAACCTTTTTCTCTCTGATCACTTCCATCATTGTAGGTGTCGTGGGCTTCTTAGTGTTTAAGCCAAGTAAAATGTGATTCAATCTTCTTTGCTCAAATCTTTGATTCCTGGTACAACATAGTCGAGATAAAACATAATGTTGTTCACTTTAGCCTGTTTGGGTTTTGCAAAACTCCATAGATATGCAGAAGAGAAATGCTATCCCACTCCATCATGGCTTGACACTTCTTAGTCTGAACTCTGTAGAATTTTAAGGATTGCCTTCTAATTTTGGCATATTATGGACTCGAGTTCAGGATGTGGTGTACTGCGTGTCATCTTTTTTCCCTTACCAAGTTACCCCTGCTATATAGCTTCTCCAAATGCTTTTGATCACTCTTTGAGAAAGGCATGTTGGAAAACAGAAACATGTGGTCAGTACTGATCACACATTGCACAAGATGGTACTGTTTCTTCTTCGTTGAACCTAGATTATCTTCTTTAGTGTTTCTCTGGAACAACAAACCTCTTGAATTGTTAAAGATTCAGTAGCATTGAGTAAAACTACAACAGGTTATGTCTACTGTTACCACTGTTTGATGCACTTCCATCCTATAGAAATCAATAGCTAATGTTTCTATTCATGACGTGTCTACCAGGGAGGATTTACATAATTAGAGTCGGGGACTTTTTTGGGGCCTTTTGTG]
[+] EMBL CF196554 [ GCCATACTTGAAGGGCTCATCAAGCAGCGCAAGGCTCGTGAGGCTGAGGCTTTCCTCGCAGAGATGAGCAAGAACGAGCAGCTGCCCTCCCCAACCAATTGTGCTGCTGCTATCAGCATGTTCTCTAAGGAGTTTAACCCGTCAGCAGCAATCGATGTGTGGCACTGCATTGTGGAGCACCAGATTACTCCGGCTGATGAGTCAGCCAGAGAACTAATAGTTGGGTTGCTTGATTTTGGCAGGTTTGCTGAGGTGAAGAAATATACTGATGAAATGCTTGACATGGGAATTGAGTTACCTCAGTCAACCATTGATAATATGAAGCGCACATTTGATAAGGTTGGCAAGCACCACACATATGACCATATTGCTAGAAGGCCAAAGCGGTGTTAGCTATACATCACCAATTTAATCATAATAGGTATGCCTTCTTTCATATGGGTGTTTTTGGCTGTGTCAGTGAATGCCATGAATTGCATGAATTCATCTATCATCTTGACCTTATGCCATTCACTAATAAGTCCTCATGACTTGCTAGTAAGCTACTTGGAGTGAATGTCATCAGTTGCGTGAATT ]
[+] EMBL CA764374 [ TAGATATCTTGTGGTGGCTGTCGGGGTTTACAGACTTATGTGCCCTCGCACTAAAGTTGATGCAACCCATAAGTCCTGATCGCAGATGGACACATTGCATTGACTATCGTCTATCTTCCAGGACCTAACTATTACACATTGGCTATATGTCTAGGCTGTGGTCTCCCCTCATCTAATTATTGAGTGAGTCCCTTGTCCCAAATTACAATGGCCTTACAGATGTGTTTTGTGCTTAACCTTTTTCTCTCTGATCACTTCCATCATTGTAGGTGTCGTGGGCTTCTTAGTGTTTAAGCCAAGTAAAATGTGATTCAATCTTCTTTGCTCAAATCTTTGATTCCTGGTACAACATAGTCGAGATAAAACATAATGTTGTTCACTTTAGCCTGTTTGGGTTTTGCAAAACTCCATAGATATGCAGAAGAGAAATGCTATCCCACTCCATCATGGCTTGACACTTCTTAGTCTGAACTCTGTAGAATTTTAAGGATTGCCTTCTAATTTTGGCATATTATGGACTCGAGTTCAAGATGTGGTGTACTGCGTGTCATCTTTTTTNCCTTACCAAGGTACCCCTGCTATATAGCTTCTCCAAATGCTTTTGATCACTCTTTGAGAAAGGCATGTTGGAAAACAGAAACATGNGGTCAGTACTGATCACACATTGCACAAGATGGGACTGGTTCTTCTTCGGTGAACCNANA TATCTTCNTTAGGGGTTCTCTGGNACAACAAACCTCTGGAATGGTT AAGATTCAGTAGCATTGNGTAAAACTACCACAGGGTATGGCTACTGGTACCACTGGTTGAGGCCCTTCCATCCTATANAAA CAANAGCTAA GGTTCTATTCA ]
consensusID : consensus_8454#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1372 fasta sequence
[ATGATACACACCAGCTTCCATTTTACTGTGGGAAAAAGTACACCCAAGGTCCCTCAACTTGTCATCGAGTTACAAAATCATCCTTAAACCACAAAACCGGATATAATGCATCCCTCAACTTATAAAACCAGTGCAAACTAAGTCTCTCGGCGGTTTTAACTCCGGTTTTGTCCGACGTGGCAGCTGACTCAGCGTGGGACCCACGTGGGTCCCATGGGTCAGCCTCTTCTTCTCCTCCCCTCTCTTCCTCTCTCTCTCTCCTCTCACCACGGGCGGCTGACAAAGAGTAGATGGGGGCGGCCGGCGGCCGGCGAGGCAGGTGCTTCCACCGGCGGCGGCGGCGTCACCAAGCTCGGGCATCACCGGATGCTGCCCATGCTGACGTGCTTGGCTCATCACCAGCCCGCAGCGACAAGCCGACCGATGACGACGATGACGACGCCGCGACGGCAGTAATCGCGGCCTCAGCTTCCGACTCCGAGCAGCCGCCATTGTTGCCGCACATGGGGGGCGGCGAGCCGAGGAGGCTCATAGTTGCGTGCGCCGACCTCGTCGACCGGGGAAACCTCGACGGGGCATGTGAAGGGATGCGGAGCGCCGTTTTCATCCATGTCGCCATGAGCCCGACGCGGAGCGCCGCATCCATCCGCATGTCGTCGTCGTCGCTGTCTCCACATCCATCGCGTCCATCTCTCTCTCTCTCTCTCTCCGAACGGCGAGGAGGATTCACCGCACCCGGAGGCGTTCCTGAAGATCCTCGGCCAGGTCTAGCCGAGGGATGCGGAAGCGGAGCTCTCCTCCTGCGGCATCGGCCCGACGGTGGAGGTCGCGGAGCAGGTGCACAGGTCTCGCGTCTGCTACTCCCGCCCCAAGTCCGCCGTCCGCTTCTTCGTCTAGTCGGGGCGGTCGGTGAATCACACCGGCTACGCCTGGAACCTCCTCGTCGACATCTCGGCAAGGCTGGCATGGAGGAGCCCATGTGGGACGCCGTCCTCACCATGAACAAGGAGGGCGGCGGCCGCGTCACCGTCGCCACCTTCGCCTCCATCTTCTCTTCCTACTGTGCCAGCGGCAACCTCAAGAAAGCCGTCGAGGCCTTTGACGTCATGGGGAAGTACGGCGTAGAGCCGGACGCCGTCGCCCTCAACTCCCTCCTCTCCTCCATGTGCCGCGGGGAAGGCCGCACGTCGGCGGCGCAGGACCTGTTCGAGCGCACCTGCCGCTCCTACCACGGGGGAGCCCGCGCGCCGCTCCTGCCCCCGCTGCCCGCGCGCTGCTCCACCGCCGCCGCGTTGCCTGTCGCCGCCATCACCGCCGAGGCATTGCTGGCCGCAGAAGAGAAGGGAGAGAGAGATGAGGAAGGGAGAGAAGA]
[-] EMBL AK111004 [ATGATACACACCAGCTTCCATTTTACTGTGGGAAAAAGTACACCCAAGGTCCCTCAACTTGTCATCGAGTTACAAAATCATCCTTAAACCACAAAACCGGATATAATGCATCCCTCAACTTATAAAACCAGTGCAAACTAAGTCTCTCGGCGGTTTTAACTCCGGTTTTGTCCGACGTGGCAGCTGACTCAGCGTGGGACCCACGTGGGTCCCATGGGTCAGCCTCTTCTTCTCCTCCCCTCTCTTCCTCTCTCTCTCTCCTCTCACCACGGGCGGCTGACAAAGAGTAGATGGGGGCGGCCGGCGGCCGGCGAGGCAGGTGCTTCCACCGGCGGCGGCGGCGTCACCAAGCTCGGGCATCACCGGATGCTGCCCATGCTGACGTGCTTGGCTCATCACCAGCCCGCAGCGACAAGCCGACCGATGACGACGATGACGACGCCGCGACGGCAGTAATCGCGGCCTCAGCTTCCGACTCCGAGCAGCCGCCATTGTTGCCGCACATGGGGGGCGGCGAGCCGAGGAGGCTCATAGTTGCGTGCGCCGACCTCGTCGACCGGGGAAACCTCGACGGGGCATGTGAAGGGATGCGGAGCGCCGTTTTCATCCATGTCGCCATGAGCCCGACGCGGAGCGCCGCATCCATCCGCATGTCGTCGTCGTCGCTGTCTCCACATCCATCGCGTCCATCTCTCTCTCTCTCTCTCTCCGAACGGCGAGGAGGATTCACCGCACCCGGAGGCGTTCCTGAAGATCCTCGGCCAGGTCTAGCCGAGGGATGCGGAAGCGGAGCTCTCCTCCTGCGGCATCGGCCCGACGGTGGAGGTCGCGGAGCAGGTGCACAGGTCTCGCGTCTGCTACTCCCGCCCCAAGTCCGCCGTCCGCTTCTTCGTCTAGTCGGGGCGGTCGGTGAATCACACCGGCTACGCCTGGAACCTCCTCGTCGACATCTCGGCAAGGCTGGCATGGAGGAGCCCATGTGGGACGCCGTCCTCACCATGAACAAGGAGGGCGGCGGCCGCGTCACCGTCGCCACCTTCGCCTCCATCTTCTCTTCCTACTGTGCCAGCGGCAACCTCAAGAAAGCCGTCGAGGCCTTTGACGTCATGGGGAAGTACGGCGTAGAGCCGGACGCCGTCGCCCTCAACTCCCTCCTCTCCTCCATGTGCCGCGGGGAAGGCCGCACGTCGGCGGCGCAGGACCTGTTCGAGCGCACCTGCCGCTCCTACCACGGGGGAGCCCGCGCGCCGCTCCTGCCCCCGCTGCCCGCGCGCTGCTCCACCGCCGCCGCGTTGCCTGTCGCCGCCATCACCGCCGAGGCATTGCTGGCCGCAGAAGAGAAGGGAGAGAGAGATGAGGAAGGGAGAGAAGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8454#0 TTTTCCTAAATCCTAATCCCTTCGCTTGTCGCCGATGAGCGCGGCGACGGAGGAGGGGCG 60
consensus_8454#1 ----------------------------------ATGA-TACA-CACCAGCTTCCATTTT 24
**** * * * *
consensus_8454#0 GCCGGACGGCGAGGAGGATTCGCCGCGCGCGGAGGCGTTCCTGGAGATCCTCGGCCGGGT 120
consensus_8454#1 ACTGTGGGAAAAAGTACACCCAAGGTCCCTCAACTTGT-CATCGAGTTACAAAATCATCC 83
* * * * * * * * * * ** * * *** * * *
consensus_8454#0 CCAGCCGGGGGATGCGGAAGCGGAGCTCTCCTCCTGCGGCATCGGCCCGACGGCGGAGGT 180
consensus_8454#1 TTAAACCACAAAACCGGATATAATGCATCCCTCAACTTATAAAACCAGTGCAAACTAAGT 143
* * * **** ** **** * * * * **
consensus_8454#0 CGCGGAGCAGGTGCTCAGGTCCCGCGTCTGCTACTCCCGCCCCAAATCCGCCGTCCGCTT 240
consensus_8454#1 CTCTCGGCGGTT--TTAACTCCGGTTTTGTCCGACGTGGCAGCTGACTCAGCGTGGGAC- 200
* * ** * * * * *** * * * ** * * * *** *
consensus_8454#0 CTTCGTCTGGTCGGGCCGGTCGGTGAAGCACACCGGCTACGCCTGGAACCTCCTCGTCGA 300
consensus_8454#1 CCACGTG-GGTCCCATGGGTCAGCCTC-TTCTTCTCCTCCCCTCTCTTCCTCTCTCTCTC 258
* *** **** **** * * * ** * * **** **
consensus_8454#0 CATCCTCGGCAAGGCCGACATG-GAGGAGCCCATGTGGGACGCCGTCCGCACCATGAACA 359
consensus_8454#1 TCCTCTCACCACGGGCGGCTGACAAAGAGTAGATGGGGGCGGCCGGCGGC-CGGCGAGGC 317
*** ** ** ** * * *** *** *** **** * ** * **
consensus_8454#0 AGGAG--------GGCGGCGGCCTCGTCACCGT-CGCCACCTTCGCCTCCATCTTCTCCT 410
consensus_8454#1 AGGTGCTTCCACCGGCGGCGGCGGCGTCACCAAGCTCGGGCATCACCGGATGCTGCCCAT 377
*** * ********* ******* * * * ** ** ** * * *
consensus_8454#0 CCTACTGCGCCAGCGGCAACCTCAGGAAG-GCCGTCGAGGCCTTCGACGTCATGGGGAAG 469
consensus_8454#1 GCTGACGTGCTTGGCTCATCACCAGCCCGCAGCGACAAGCCGACCGATGACGACGATGAC 437
** * ** * ** * *** * ** * ** * *** * * * *
consensus_8454#0 TACGGCGTGGAGCCGGACGCCGTCGCCCTCAACTCCCTCCTCTCCGCCATGTGCCGCGGG 529
consensus_8454#1 GACGCCGCGACGGCAGTAATCG-CGGCCTCAGCTTCCGACTCCGAGCA----GCCGCCAT 492
*** ** * * * * ** ** ***** ** ** *** ** *****
consensus_8454#0 GAGGGCCGCGCGCAGGCGGCGCAGGACCTGTTCGAGCGCACCAAGGCCACCGTCGCGCCC 589
consensus_8454#1 TGTTGCCGCACATGGGGGGCGGCGAGCC-----GAGGAGGCTCATAGTTGCGT-GCGCC- 545
***** * ** **** * ** *** * * *** *****
consensus_8454#0 GACGCGGACACCTTCGGGATTCTCCTCGAGGCGTGGGAGAAAGAGGGGAACGCCCAGCGC 649
consensus_8454#1 GACCTCGTCGACCGGGGAAACCTCGACGGGGCATGTGAAGGGATGCGGAGCGCCGTTTTC 605
*** * * * ** * *** ** *** ** ** * *** **** *
consensus_8454#0 GCCAAGAGCACCTTCGGC--GAGATGATTGTCCGCGTCGGCTGGGACGCCGGCAACATGC 707
consensus_8454#1 ATCCATGTCGCCATGAGCCCGACGCGGAGCGCCGCATCCATCCGCATGTCGTCGTCGTCG 665
* * * ** * ** ** * **** ** * * * ** * * *
consensus_8454#0 CCGCGTACGACGCCTTCCTCTCCACGCTTGTGCGCGGGGATCAATT--CGGCGAGGCGCT 765
consensus_8454#1 CTGTCTCCACATCCATCGCGTCCATCTCTCTCTCTCTCTCTCTCCGAACGGCGAGGAGGA 725
* * * * ** ** **** * * ** ******** *
consensus_8454#0 CAAGTTCCTTCAGGTGATGCGGTCCAAGGGCTGCCTCCCGGGGCT---CAAGTTCTTCGC 822
consensus_8454#1 TTCACCGCACCCGGAGGCGTT-CCTGAAGATCCTCGGCCAGGTCTAGCCGAGGGATGCGG 784
* * ** * * * * * * ** ** ** * ** * **
consensus_8454#0 CAGGGCAATCGACCTTGTCGTCCGCAAGCGCGACTATGCGAACTCTTTGGCCATTTGGCA 882
consensus_8454#1 AAGCGGAGCTCTCCTCCTGCGGCATCGGCCCGACGGTG-GAGGTCGCGGAGCA---GGTG 840
** * * *** * * ** **** ** ** ** * ** **
consensus_8454#0 AATGATGATCTCGGATGCTGGCCTTGTACCAAACCTCCCCATGTACAATGCCATGATCGA 942
consensus_8454#1 CACAGGTCTCGCGTCTGCTACTCCCGCCCCAAGTCCGCC---GTCCGCTTCTTCGTCTAG 897
* ** ** **** * * **** * ** ** * * * *
consensus_8454#0 CCTCTGTTGCAGTGTTGGTGATACCGACTACGCCCTCCGCATGCTCGACGAAATGCCCTT 1002
consensus_8454#1 TCGGGGCGGTCG-GTGAATCACACCGGCTACGCCTGGAACCTCCTCGTCGACAT-CTCGG 955
* * * * ** * * **** ******* * * **** *** ** * *
consensus_8454#0 CAATGGCGTCTTTGCAGATTTTATCACGTACAATGCCATACTTGAAGGGCTCATCAAGCA 1062
consensus_8454#1 CAAGGCTGGCATGGAGGAGCCCAT---GTGGGACGCCGTCCTCACCA---TGAACAAGGA 1009
*** * * * * * ** ** ** * *** * ** * * **** *
consensus_8454#0 GCGCAAGGCTCGTGAGGCTGAGGCTTTCCTCGCAGAGATGAGCAAGAACGAGCAGCTGCC 1122
consensus_8454#1 GGGCGGCGGCCGCGTCACCGTCGCCACCTTCGCCTCCAT----------------CTTCT 1053
* ** * ** * * * ** * **** ** ** *
consensus_8454#0 CTCCCCAACCAATTGTGCTGCTGCTATCAGCATGTTCTCTAAGGAGTTTAACCCGTCAGC 1182
consensus_8454#1 CTTCCTA-CTGTGCCAGCGGCAACC-TCAAGAAAGCCGTCGAGGCCTTTGA--CGTCATG 1109
** ** * * ** ** * *** * * *** *** * *****
consensus_8454#0 AGCAATCGATGTGTGGCACTGCATTGTGGAGCACCAGATTACTCCGGCTGATGAGTCAGC 1242
consensus_8454#1 GGGAAGTACGGCGTAGAGCCGGACGCCGTCGCCCTCAACTCCCTCCTCTCCTCCATGTGC 1169
* ** * ** * * * * * ** * * * * * ** * * **
consensus_8454#0 CAGAGAACTAATAGTTGGGTTGCTTGATTTTGGCAGGTTTGCTGAGGTGAAGAAATATAC 1302
consensus_8454#1 CGCGGGGAAGGCCGCACG-----TCGGCGGCGCAGGACCTGTTCGAGCGCA----CCTGC 1220
* * * * * * * * ** * * * * * *
consensus_8454#0 TGATGAAATGCTTGACATGGGAATTGAGTTACCTCAGTCAACCATTGATAATATGAAGCG 1362
consensus_8454#1 CGCTCCTAC-CACGGGGGAGCCCGCGCGCCGCTCCTGCCC-CCGCTGCCCGCGCGCTGCT 1278
* * * * * * * * * * * * ** ** * **
consensus_8454#0 CACATTTGATAAGGTTGGCAAGCACCACACATATGACCA---TATTGCTAGAAGGCCAAA 1419
consensus_8454#1 CCACCGCCGCCGCGTTGCCTGTCGCCGCCATCACCGCCGAGGCATTGCTGGCCG-CAGAA 1337
* **** * * ** * * ** ****** * * * **
consensus_8454#0 GCGGTGTTAGCTATACATCACCAATTTAATCATAATAGGTATGCCTTCTTTCATATGGGT 1479
consensus_8454#1 GAGAAGGGAGAGAGAGATGAGGAAGGGAGAGAAGA------------------------- 1372
* * * ** * * ** * ** * * *
consensus_8454#0 GTTTTTGGCTGTGTCAGTGAATGCCATGAATTGCATGAATTCATCTATCATCTTGACCTT 1539
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 ATGCCATTCACTAATAAGTCCTCATGACTTGCTAGTAAGCTACTTGGAGTGAATGTCATC 1599
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 AGTTGCGTGAATTCACCAATTATCTTGACCTTATGACATTCACTAATTAGTCCTCATGAC 1659
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 TTGCAATTAAGCTACTTGGAATTGGAGGTTTTATCCTGGACTACTAGTTTGGTTCCCTAT 1719
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 GTTCTTGCATGAGCCAATTCCTTGTTCCTCTTGGCTGTCTTGCTCTCCTTGTCTTGTTAA 1779
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 TATTGGAGTACCTTTTCTTGGCACGGTGCACAAGGCCACTAAAAATGACTATTCCACTGA 1839
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 CTATTTATGTGCGCTACTTTTATGCATTTTGATAACTTTCCTTGCCCCTTTGGAAGACAC 1899
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 TGGACATCTATGATTCCATCTTCCTTTACAATAGGATTCATAGTGATGTTGTATGGAAAT 1959
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 GTAGCTGTTTGGTGCTCTTCAATGGAGGAAGAACTCCTAACTCATATCTTGGGTATCTAG 2019
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 CGGACATGCACTTCTATCACAACAACTCATATCTTGGGTTATCTAGCGGACATGCACTTC 2079
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 TCTTACAACAACTCCTTGTCGATGTCTACACTACTCACCCCACTTTAAGATAGATATCTT 2139
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 GTGGTGGCTGTCGGGGTTTACAGACTTATGTGCCCTCGCACTAAAGTTGATGCAACCCAT 2199
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 AAGTCCTGATTGCAGATGGACACATTGCATTGACTATCGTCTATCTTCCAGGACCTAACT 2259
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 ATTACACATTGGCTATATGTCTAGGCTGTGGTCTCCCCTCATCTAATTATTGAGTGAGTC 2319
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 CCTTGTCCCAAATTACAATGGCCTTACAGATGTGTTTTGTGCTTAACCTTTTTCTCTCTG 2379
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 ATCACTTCCATCATTGTAGGTGTCGTGGGCTTCTTAGTGTTTAAGCCAAGTAAAATGTGA 2439
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 TTCAATCTTCTTTGCTCAAATCTTTGATTCCTGGTACAACATAGTCGAGATAAAACATAA 2499
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 TGTTGTTCACTTTAGCCTGTTTGGGTTTTGCAAAACTCCATAGATATGCAGAAGAGAAAT 2559
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 GCTATCCCACTCCATCATGGCTTGACACTTCTTAGTCTGAACTCTGTAGAATTTTAAGGA 2619
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 TTGCCTTCTAATTTTGGCATATTATGGACTCGAGTTCAAGATGTGGTGTACTGCGTGTCA 2679
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 TCTTTTTTCCCTTACCAAGTTACCCCTGCTATATAGCTTCTCCAAATGCTTTTGATCACT 2739
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 CTTTGAGAAAGGCATGTTGGAAAACAGAAACATGTGGTCAGTACTGATCACACATTGCAC 2799
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 AAGATGGTACTGTTTCTTCTTCGTTGAACCTAGATTATCTTCTTTAGTGTTTCTCTGGAA 2859
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 CAACAAACCTCTTGAATTGTTAAAGATTCAGTAGCATTGAGTAAAACTACAACAGGTTAT 2919
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 GTCTACTGTTACCACTGTTTGATGCACTTCCATCCTATAGAAATCAATAGCTAATGTTTC 2979
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 TATTCATGACGTGTCTACCAGGGAGGATTTACATAATTAGAGTCGGGGACTTTTTTGGGG 3039
consensus_8454#1 ------------------------------------------------------------
consensus_8454#0 CCTTTTGTG 3048
consensus_8454#1 ---------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||