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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8461#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 3189 fasta sequence
[ACAAAAATACTCCCAGCCCCCCACCTCCCCCACTCACTCGGATCCCACCACCATTTCGAACGGCAGCGCCCTCCCCTCTCCTCTCTCCTCGACACACAACCGCCGCCGCCGCCGCCGCCGCTGCGTCCGGTTTCCCCGCGTCGATCGATCGCCGTCGCCGTCGCCGGCCGGGAGAGCCCGCCCCCCCTAGATCGATCCCCAAGGCCGGGCTGGGTCGGGGCCCCGAGCGATGGAGGCGATCGAGGAGCTCTCGGAGCTCGCCGACGCCACGCGGCAGGCCTCCGCGCTGCTCGCCGACGACGACCCGTCGGAGCAGCCCGCGCAGCGGCGCGGGGGTTCCTCCTTCCTCACCGTCGTCGCGCTCGGCAACATCGGAGCGGGGAAATCCGCGGTGCTCAATGGATTGATCGGCCACCCCGTTCTCCCTACCGGGGAGAATGGTGCGACGAGGGCCCCAATATGCGTAGATCTTCAGAGAGATGCATCACTCAGCAGCAAATCCATCATGCTGCAAATTGACAGCAAGTCGCAGCAGGTTTCTGCCAGTTCCCTCAGGCATTCGCTGCAGGACCGGTTAACCAAGGCCGGTAGTTTTGGGAAGGGGCGATCGGAGGAGATAAATGTGAAATTATGCACGAGCACTGCCCCTCCATTAAAACTAATTGATTTACCGGGGATTGATCAGCGGAGCATGGATGAATCAATGATTGGGAACTATGCTGCACGCAATGATGCAATTTTGCTAGTTATCGTTCCAGCTCTACAAGCACCTGATGTAGCATCTTCTCGAGCTCTAAGGATTGCCAGAGAACTAGATTCAGAAGGTAGTAGAACTATTGGTGTCGTAAGTAAAGTTGATCAAGTAGCCGAAGACCAGAGAGCTCTTCTTGCTGTTCAGGCCCTGCTTGTAAACCAAGGCCCTAGAACTGCAGCTGACATTCAGTGGATAGCTACGATTGGGAACTCTGTTCCTATTGCCTCTGTTCAGTCTGGAGTAGGTTCTGAATCCTCACCAGAAACTATTTGGAAAGTTGAAGTTGAAAGCCTTAAATCTATACTTCTTGGATCTCCGCAAAGTAAACTTGGTAGGGAGGCTTTAGTTGATTCACTTGCTAAGCAGATAAGAACACGGATAAAAGTTAGACTCCCAAATCTCCTGAATGGTCTTCAAGGCAAGTCTCAAATAATCCAGGAGGAATTAGCAAAACTTGGAGAACAGATGGTCCAAAGTTCGGAAGGAACTCGGGTCACTGCTTTAGGACTTTGCCGGGAATTTGAGGACAAATTTCTTCAACATATTACTGGTGTTGAGGGTGGAGGTTGGAAAGTTGTTGCAAGCTTTGAGGGGAAGTTCCCAACCAGGATCAAACAACTCCCTCTGGACAAGCATTTTGATATGAAAAATGTGAAAAGGATTGTTCTTGAGGCTGATGGTTACCAACCATACCTGATATCACCTGAAAAAGGTTTAAGATCTCTTATAAAAGGTCTTCTAGAATTAGCGAAGGAACCATCGATACTCCTTGTGGATGAGGTTCACCGTGTATTGCTAGATATAGTATCAGCCACAGCAAATGCCACCCCAGGACTTGGCAGATATCCTCTATTTAAGCGTGAGGTAATTGCAATTGGATCTGCTGCTTTAGATGGCTTTAAAGATGAGGCTAAAAAGATGGTAATTGCACTAGTGGATATGGAACGAGCATTCGTGCCTCCCCAGCATTTTATCCGCTTGTTGCAGAGAAGAATGGAAAGGCAACGTCACGAAGATGAGCTGAAAAGTCGCTCAACAAAGAAGGTTTCAGATGCAGAACCTAGCAAAGCCACAAGTCCACAAACCCAAACAAAAGAAGGATCAAATTTACAAGTCTTAGGACCTGCAGGAGAAATTACTGCTGGTTTCCTTTTCAAAAAACGTGCAAAAGCAAATGACTGGAGTAACCGCTGGTTTGTTCTAAATGAGAGAAGTGGAAAGCTTGGTTACACCAAGAAACAAGAGGAGAGGCATTTTCGAGGCGTCATCAATTTGGAGGAGTGCAATCTTGAGGAAGTTTTAGATGAGGAAGATCCTACGAGAAGCCTTAAAGATCCTAAAAAGCCAAATGTGCCAGATATTGGAACTCCTGGTCTCATTTTCAAGATTACCCATAAGGTTGCTTATAAAAATGTTTTAAAAGCTCACAAGGCTATTATACTGAAGGCTGAAAGTATGGCGGAAAAAACTGAATGGGTTACTAAGATTAGGAGCATTGTTGACCAAAAAGGAGCTTCTGCAACGAGTGGTTTACCAATGAAGCAAAGCCATTCGGATGGTTCTCTAATGTCCACTTCTAAAAAGGATGGTTCTCTAGACACGATGCTTAGAAAGCCAGTAGATCCTGAGGAAGAGCTTAAATGGATATCTCAAGAAGTCCGTGGGTATGTGGAAGCTGTTCTCAGCAGTCTTGCGGCAAATGTCCCCAAGGCTGTGGTTCTTTGCCAAGTTGAGAAGGCAAAGGAAGGCATGCTTAATCAGCTCTATACTT-CGATAAGCATGCG-AAGCGTAGAAAGGATTGAAGAGCTAATCCAGGAGGACCACAGTGTGAAGCACAGGCGTGAAAAAATCAAAAAGCAATCATCACTTCTTTCCAAGGTTACTCGTCTGCTCCGTATCCATGATAATCGCTCAGCTACTTCTAATTGGTCGAATGATTCTGCTGGATCAGATAGTAATCCAGGGAGCAGTGGCCAGTCTGGAGACGAATGGAAATCTGCATTTGATCCATCACAAGATGTTGATCCATCTGCTGCTGGAACAAACACGGGGAGCCGCCGCATTCCGAGCCGAATGCCGCCGCCACCTCCACAGGGTGGTTGATCAGTTCGTAGTTTTCTGGTCCTGGGGCTTCTGTTTTCTCAGCTGCAGGGAGTACATTCCATTATACTATTGCTCTAGGTGCTCTTGATCAATGGCTAATTTGGGTTTCAAGAAGAAAACAGTTAACGGGAATTGACCGGTGAAGCGTTCATAGGCCTTTGAATAACTTGTTAGTTGAAGATAGAATGTCAGTAGGACCTCGAATATTGTTAGGCACATAACCGCAGTACGTTTATCTCTGTGTTTTTTTTTTCTCATGGAACTCTGGCAAAATCTTGTATTTCATGATAATTATGTTGTTTTTGAGTATTCTACCGATTTGCTATCAAAAA]
[+] EMBL AK069134 [ACAAAAATACTCCCAGCCCCCCACCTCCCCCACTCACTCGGATCCCACCACCATTTCGAACGGCAGCGCCCTCCCCTCTCCTCTCTCCTCGACACACAACCGCCGCCGCCGCCGCCGCCGCTGCGTCCGGTTTCCCCGCGTCGATCGATCGCCGTCGCCGTCGCCGGCCGGGAGAGCCCGCCCCCCCTAGATCGATCCCCAAGGCCGGGCTGGGTCGGGGCCCCGAGCGATGGAGGCGATCGAGGAGCTCTCGGAGCTCGCCGACGCCACGCGGCAGGCCTCCGCGCTGCTCGCCGACGACGACCCGTCGGAGCAGCCCGCGCAGCGGCGCGGGGGTTCCTCCTTCCTCACCGTCGTCGCGCTCGGCAACATCGGAGCGGGGAAATCCGCGGTGCTCAATGGATTGATCGGCCACCCCGTTCTCCCTACCGGGGAGAATGGTGCGACGAGGGCCCCAATATGCGTAGATCTTCAGAGAGATGCATCACTCAGCAGCAAATCCATCATGCTGCAAATTGACAGCAAGTCGCAGCAGGTTTCTGCCAGTTCCCTCAGGCATTCGCTGCAGGACCGGTTAACCAAGGCCGGTAGTTTTGGGAAGGGGCGATCGGAGGAGATAAATGTGAAATTATGCACGAGCACTGCCCCTCCATTAAAACTAATTGATTTACCGGGGATTGATCAGCGGAGCATGGATGAATCAATGATTGGGAACTATGCTGCACGCAATGATGCAATTTTGCTAGTTATCGTTCCAGCTCTACAAGCACCTGATGTAGCATCTTCTCGAGCTCTAAGGATTGCCAGAGAACTAGATTCAGAAGGTAGTAGAACTATTGGTGTCGTAAGTAAAGTTGATCAAGTAGCCGAAGACCAGAGAGCTCTTCTTGCTGTTCAGGCCCTGCTTGTAAACCAAGGCCCTAGAACTGCAGCTGACATTCAGTGGATAGCTACGATTGGGAACTCTGTTCCTATTGCCTCTGTTCAGTCTGGAGTAGGTTCTGAATCCTCACCAGAAACTATTTGGAAAGTTGAAGTTGAAAGCCTTAAATCTATACTTCTTGGATCTCCGCAAAGTAAACTTGGTAGGGAGGCTTTAGTTGATTCACTTGCTAAGCAGATAAGAACACGGATAAAAGTTAGACTCCCAAATCTCCTGAATGGTCTTCAAGGCAAGTCTCAAATAATCCAGGAGGAATTAGCAAAACTTGGAGAACAGATGGTCCAAAGTTCGGAAGGAACTCGGGTCACTGCTTTAGGACTTTGCCGGGAATTTGAGGACAAATTTCTTCAACATATTACTGGTGTTGAGGGTGGAGGTTGGAAAGTTGTTGCAAGCTTTGAGGGGAAGTTCCCAACCAGGATCAAACAACTCCCTCTGGACAAGCATTTTGATATGAAAAATGTGAAAAGGATTGTTCTTGAGGCTGATGGTTACCAACCATACCTGATATCACCTGAAAAAGGTTTAAGATCTCTTATAAAAGGTCTTCTAGAATTAGCGAAGGAACCATCGATACTCCTTGTGGATGAGGTTCACCGTGTATTGCTAGATATAGTATCAGCCACAGCAAATGCCACCCCAGGACTTGGCAGATATCCTCTATTTAAGCGTGAGGTAATTGCAATTGGATCTGCTGCTTTAGATGGCTTTAAAGATGAGGCTAAAAAGATGGTAATTGCACTAGTGGATATGGAACGAGCATTCGTGCCTCCCCAGCATTTTATCCGCTTGTTGCAGAGAAGAATGGAAAGGCAACGTCACGAAGATGAGCTGAAAAGTCGCTCAACAAAGAAGGTTTCAGATGCAGAACCTAGCAAAGCCACAAGTCCACAAACCCAAACAAAAGAAGGATCAAATTTACAAGTCTTAGGACCTGCAGGAGAAATTACTGCTGGTTTCCTTTTCAAAAAACGTGCAAAAGCAAATGACTGGAGTAACCGCTGGTTTGTTCTAAATGAGAGAAGTGGAAAGCTTGGTTACACCAAGAAACAAGAGGAGAGGCATTTTCGAGGCGTCATCAATTTGGAGGAGTGCAATCTTGAGGAAGTTTTAGATGAGGAAGATCCTACGAGAAGCCTTAAAGATCCTAAAAAGCCAAATGTGCCAGATATTGGAACTCCTGGTCTCATTTTCAAGATTACCCATAAGGTTGCTTATAAAAATGTTTTAAAAGCTCACAAGGCTATTATACTGAAGGCTGAAAGTATGGCGGAAAAAACTGAATGGGTTACTAAGATTAGGAGCATTGTTGACCAAAAAGGAGCTTCTGCAACGAGTGGTTTACCAATGAAGCAAAGCCATTCGGATGGTTCTCTAATGTCCACTTCTAAAAAGGATGGTTCTCTAGACACGATGCTTAGAAAGCCAGTAGATCCTGAGGAAGAGCTTAAATGGATATCTCAAGAAGTCCGTGGGTATGTGGAAGCTGTTCTCAGCAGTCTTGCGGCAAATGTCCCCAAGGCTGTGGTTCTTTGCCAAGTTGAGAAGGCAAAGGAAGGCATGCTTAATCAGCTCTATACTT CGATAAGCATGCG AAGCGTAGAAAGGATTGAAGAGCTAATCCAGGAGGACCACAGTGTGAAGCACAGGCGTGAAAAAATCAAAAAGCAATCATCACTTCTTTCCAAGGTTACTCGTCTGCTCCGTATCCATGATAATCGCTCAGCTACTTCTAATTGGTCGAATGATTCTGCTGGATCAGATAGTAATCCAGGGAGCAGTGGCCAGTCTGGAGACGAATGGAAATCTGCATTTGATCCATCACAAGATGTTGATCCATCTGCTGCTGGAACAAACACGGGGAGCCGCCGCATTCCGAGCCGAATGCCGCCGCCACCTCCACAGGGTGGTTGATCAGTTCGTAGTTTTCTGGTCCTGGGGCTTCTGTTTTCTCAGCTGCAGGGAGTACATTCCATTATACTATTGCTCTAGGTGCTCTTGATCAATGGCTAATTTGGGTTTCAAGAAGAAAACAGTTAACGGGAATTGACCGGTGAAGCGTTCATAGGCCTTTGAATAACTTGTTAGTTGAAGATAGAATGTCAGTAGGACCTCGAATATTGTTAGGCACATAACCGCAGTACGTTTATCTCTGTGTTTTTTTTTTCTCATGGAACTCTGGCAAAATCTTGTATTTCATGATAATTATGTTGTTTTTGAG ]
[+] EMBL AK072791 [ CCCACCTCCCCCACTCACTCGGATCCCACCACCATTTCGAACGGCAGCGCCCTCCCCTCTCCTCTCTCCTCGACACACAACCGCCGCCGCCGCCGCCGCCGCTGCGTCCGGTTTCCCCGCGTCGATCGATCGCCGTCGCCGTCGCCGGCCGGGAGAGCCCGCCCCCCCTAGATCGATCCCCAAGGCCGGGCTGGGTCGGGGCCCCGAGCGATGGAGGCGATCGAGGAGCTCTCGGAGCTCGCCGACGCCACGCGGCAGGCCTCCGCGCTGCTCGCCGACGACGACCCGTCGGAGCAGCCCGCGCAGCGGCGCGGGGGTTCCTCCTTCCTCACCGTCGTCGCGCTCGGCAACATCGGAGCGGGGAAATCCGCGGTGCTCAATGGATTGATCGGCCACCCCGTTCTCCCTACCGGGGAGAATGGTGCGACGAGGGCCCCAATATGCGTAGATCTTCAGAGAGATGCATCACTCAGCAGCAAATCCATCATGCTGCAAATTGACAGCAAGTCGCAGCAGGTTTCTGCCAGTTCCCTCAGGCATTCGCTGCAGGACCGGTTAACCAAGGCCGGTAGTTTTGGGAAGGGGCGATCGGAGGAGATAAATGTGAAATTATGCACGAGCACTGCCCCTCCATTAAAACTAATTGATTTACCGGGGATTGATCAGCGGAGCATGGATGAATCAATGATTGGGAACTATGCTGCACGCAATGATGCAATTTTGCTAGTTATCGTTCCAGCTCTACAAGCACCTGATGTAGCATCTTCTCGAGCTCTAAGGATTGCCAGAGAACTAGATTCAGAAGGTAGTAGAACTATTGGTGTCGTAAGTAAAGTTGATCAAGTAGCCGAAGACCAGAGAGCTCTTCTTGCTGTTCAGGCCCTGCTTGTAAACCAAGGCCCTAGAACTGCAGCTGACATTCAGTGGATAGCTACGATTGGGAACTCTGTTCCTATTGCCTCTGTTCAGTCTGGAGTAGGTTCTGAATCCTCACCAGAAACTATTTGGAAAGTTGAAGTTGAAAGCCTTAAATCTATACTTCTTGGATCTCCGCAAAGTAAACTTGGTAGGGAGGCTTTAGTTGATTCACTTGCTAAGCAGATAAGAACACGGATAAAAGTTAGACTCCCAAATCTCCTGAATGGTCTTCAAGGCAAGTCTCAAATAATCCAGGAGGAATTAGCAAAACTTGGAGAACAGATGGTCCAAAGTTCGGAAGGAACTCGGGTCATTGCTTTAGGACTTTGCCGGGAATTTGAGGACAAATTTCTTCAACATATTACTGGTGTTGAGGGTGGAGGTTGGAAAGTTGTTGCAAGCTTTGAGGGGAAGTTCCCAACCAGGATCAAACAACTCCCTCTGGACAAGCATTTTGATATGAAAAATGTGAAAAGGATTGTTCTTGAGGCTGATGGTTACCAACCATACCTGATATCACCTGAAAAAGGTTTAAGATCTCTTATAAAAGGTCTTCTAGAATTAGCAAAGGAACCATCGATACTCCTTGTGGATGAGGTTCACCGTGTATTGCTAGATATAGTATCAGCCACAGCAAATGCCACCCCAGGACTTGGCAGATATCCTCTATTTAAGCGTGAGGTAATTGCAATTGGATCTGCTGCTTTAGATGGCTTTAAAGATGAGGCTAAAAAGATGGTAATTGCACTAGTGGATATGGAACGAGCATTCGTGCCTCCCCAGCATTTTATCCGCTTGTTGCAGAGAAGAATGGAAAGGCAACGTCACGAAGATGAGCTGAAAAGTCGCTCAACAAAGAAGGTTTCAGATGCAGAACCTAGCAAAGCCACAAGT ]
[+] EMBL C72177 [ CCTTTTCAAAAAACGTGCAAAAGCAAATGACTGGAGTAACCGCTGGTTTGTTCTAAATGAGAGAAGTGGAAAGCTTGGTTACACCAAGAAACAAGAGGAGAGGCATTTTCGAGGCGTCATCAATTTGGAGGAGTGCAATCTTGAGGAAGTTTTAGATGAGGAAGATCCTACGAGAAGCCTTAAAGATCCTAAAAAGCCAAATGTGCCAGATATTGGAACTCCTGGTCTCATTTTCAAGATTACCCATAAGGTTGCTTATAAAAATGTTTTAAAAGCTCACAAGGCTATTATACTGAAGGCTGAAAGTATGGCGGAAAAAACTGAATGGGTTACTAAGATTAGGAGCATTGTTGACCAAAAAGGAGCTTCTGCAACGAGTGGTTTACCAATGANGCAAAGCCATTCGGATGG ]
[+] EMBL AU085846 [ AGGAAGNCATGCTTAATCAGCTCTATACTTCCGATAAGCATGCGAAAGCGTAGAAAGGATTGAAGAGCTAATCCAGGAGGACCACAGTGTGAAGCACAGGCGTGAAAAAATCAAAAAGCAATCATCACTTCTTTCCAAGGTTACTCGTCTGCTCCGTATCCATGATAATCGCTCAGCTACTTCTAATTGGTCGAATGATTCTGCTGGATCAGATAGTAATCCAGGGAGCAGTGGCCAGTCTGGAGACGAATGGAAATCTGCATTTGATCCATCACAAGATGTTGATCCATCTGCTGCTGGAACAAACACGGGGAGCCGCCGCATTCCGAGCCGAATGCCGCCGCCACCTCCACAGGGTGGTTGATCAGTTCGTAGTTTTCTGGTCCTGGGGCTTCTGTTTTCTCAGCTGCAGGGAGTACATTCCATTATACTATTGCTCTAGGTGCTCTTGATCAATGGCTAATTTGGGTTTCAAGAAGAAAACAGTTAACGGGAATTGACCGGTGAAGCGTTCATAGGCCTTTGAATAACTTGTTAGTTGAAGATAGAATGTCAGTAGGACCTCGAATATTGTTAGGCACATAACCGCAGTACGTTTATCTCTGTG TTTTTTTTTCTCATGGAACTCTGGCAAAATCTTGTATTTCATGATAATTATGTTGTTTTTGAGTATTCTACCGATTTGCTATCAAAAA]
[+] EMBL CB096407 [ AATCATCACTTCTTTCCAAGGTTACTCGTCTGCTCCGTATCCATGATAATCGCTCAGCTACTTCTAATTGGTCGAATGATTCTGCTGGATCAGATAGTAATCCAGGGAGCAGTGGCCAGTCTGGAGACGAATGGAAATCTGCATTTGATCCATCACAAGATGTTGATCCATCTGCTGCTGGAACAAACACGGGGAGCCGCCGCATTCCGAGCCGAATGCCGCCGCCACCTCCACAGGGTGGTTGATCAGTTCGTAGTTTTCTGGTCCTGGGGCTTCTGTTTTCTCAGCTGCAGGGAGTACATTCCATTATACTATTGCTCTAGGTGCTCTTGATCAATGGCTAATTTGGGTTTCAAGAAGAAAACAGTTAACGGGAATTGACCGGTGAAGCGTTCATAGGCCTTTGAATAACTTGTTAGTTGAAGATAGAATGTCAGTAGGACCTCGAATATTGTTAGGCACATAACCGCAGTACGTTTATCTCTGTGTTTTTTTTTTCTCATGGAACTCTGGCAAAATCTTGTATTTCATGATAATTATGCTGTTTTTGAGTATTCTACCGATT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||