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Oryza sativa
cluster # 8700 cluster # 8700       Sequences # 5       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8700#0 length = 3148 sequences # 3  
 consensus_8700#1 length = 637 sequences # 1  
consensus_8700#2 length = 255 sequences # 1  
consensusID : consensus_8700#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 3148
fasta sequence 
                              [ATGTACTGGCCTGTTTGTTGCACGGGATTTACTGTCACAGAGTTTTTAGGTTTTAGGCGATTTTCCCCGTGTTCATGTTTCCCTTTTGACAGTGGATCATTGCTTATCTTTGTTGTTCTTCTTTCAGTATATACTTCTTTCAGTAAATAGATGGTGGCTATTACATAGATGAAGCACACGGTCGTTAGTTAATGACAAATATCATTGCTTTTTTTTCCTGGTTCTGATTCATTATTGGATCATGTTTCGCCATTCAGAGTGTGTCCCGTGGTGTTTTCTTTTCATGCAAAACCATGTGGTTCATTTGTATTTTTGAGTCTTTCCTTAAGTGCATCTCTGTACGTTTACATGTTTTTTTCCCTTCATATCGATTTTTTTTTGGCGCAGGTGCTTATTGTCGCGGTCAGGTCCGTGCGATACGTTCGTTACTGTTGTGCTGCTGTTCCCTTTACCATCAGCTCCTGTTCAGGTTGCGGACCACATCTTCTGTGCCCGTACATGTCGGCTAAGTTCCTATATGGAAGGGGGTTGTGTGGTTAGGCCTGCTCGTCGACGGGATCGCCGATTGCTAGAGCGTAGCAGCGCTTCTCTTAGATCATCTTCCTCTAATTCAGCTGCCAGCGAATATGTTTGGGAGACTGTTGCTCCACCCCGTCAGGACGATGGATTTTTCCCTATCTACCCTGCATGGTATTCTTCAAAAAGACGGCAAATGCGTTCAAAAAAATTGGCCATGAAACGATTGGTGGCTGCAGGCAAAAAACCTTGCCGTATTGCTCCTGTCTCTTGCAACAAGTTTGACAGTGATTATGCCAAGTTTTTGAGAGAGACTTCAAAGGATAGGTGTGATTATGGCCCTCCTGAGTATCGCTGCCGTTTGTGCGCTGCTCAGTTCTGGTACCAGGAACGGTGCAAGAAAGATTCTGCTATTACCAAGCGCCGTGTCTGTTACAACCTTTGTTGCAAAGATGGCTTTCGATTTGCTGTGTGACATATCCCCAGCAAGCAGAGGCTGGAAGATCCGTGCAAAGATAGCAAGAATGTGGGACTACACTGGTACAGCTGACGATCTGCCTCCTATACATGTTGATCTGGTGCTTATTGATGAGAAGGGAAATGCAATGTATGCTGAAATTCCAGGCGTTGAGGCTGATAAGTTCAGACCACTTCTTCAGGAATCGAAAGTCTACACTTTTAGCAAGTTCCTTATTTTGCCTAGCAAACCTGCATACAAGCCCTTCCCTAACAAGTATATGATCAAGCTTACTCCATGGACAAACGTGGAACAGGTCAATGAAGTTCCTGCTGATTTCCCATCCCATGTGTTTAATTTGGTTCAATTCTCATATCTAAGCCTGCGCGTTGGGATGCAAGAGTACTTCACTGATGTGATCGGTATGATCATTGGGGTATCAAAGCTAGCCTATGTCCGAATGGCGTCTAAAACGTCAGACACACCTAAGAGGGTCATTGCTCTAAGGGATCTTGCGAACTGTGAGGTTAAACTTGTCCTATGGGGAGAGCATGCTCCCGACTTTGATGCTGATGCTGTTCATAGTGTTGGCCAAGATAATGCTGTCGTTGGTATCTTTGTTGATACTCTTATGAAAGCATATAATAATGAAGAAACTCTTAGTGGAGGATCAGCCTGCAAATGGTATTTAAATGAGGACATACCAGAGATAAACCAGTTCTTTGATAGCCTGGGTGATAGTGCTCCAAAGATCCAGTGGATATCAACCGGAGCAGAGTCCTTTGGTTCGTCACAACGCCCAGCACGGTTGGAGCATAAATCTGTTGCTGACCTTAAAAAGATTGATCCATGGGAAGCTGCGGGTGCTGGCTTCTCATGTACTGTGACCATAGCTAAGTTGAGCCCATCTCAGTCATGGTGGTTTTCATCCTGTTCCCGTTGTCATAGAGCCGCAACTGCATATGGATCTAGCTATAAATGCTCCAGCGGTTGCTCATCAGTTACTGCCATTCCAAAGTACCGTCTTTGCCTGATAGGAACCGATGGAACTAATTCAGCAGAGTTTGTGCTATTTGGACGTGTTGCGCAGCAAGTTGTTGGCCGTCCTGTTATGAATCTTATCAAATTTCAGGGCAGATCAGACAATATTCCTAAAGAAATTGCTGCTGTTGTTTCACAGAAATTTACCTTTGCTGTCTCTGTCACTGAGCGGAGCCTTATGCACAGGAATATATCTTTTCAAGTTAATGGAATCGAGACTTTCTTTGGAAGACAGGGTTCTATTCCGCAGCCTAGGGAATAGGGTCCATCTGCAGGCCCTTCTACTCCTTTGGCTCTTGCTGCTTCTGGTATGGATAAGGATGACGCCTCTCAATCTCATGAGTCAACCCCGGTCGATTCATCTACTTCGACTGCTGATCCAGTCGATGAACTTCCTGGTGACAGCAAGAAGCGGAAATCCATTGTCCGTCATCCTCTAGCAGCACAGAAAAAATTGACCTTTGAAACAGCTCCATCCAGCAAAGAAAACACCAGCCCGGTTGACCCTCCTACTAGTTCTTCTCGCACTGATGACCAAGCTGCTGATAAGCAACATGTTGTGCCTCATGAGGTTGATGTTTCTTAGATTGCAGCTGCCTCTGCTAAACCAAATACTCAGGTCAAAGATATCCTACCAACTGAAGCCAAAAAGAAAAGTGTTGATCCAGGCTCTACAGGCACACTCAAGACTAAGCCTCCTGTACCGAAAGGGAACTAAATTGCTCACCTTAGCTTTTGTGCTGATGGGAACAATACCCTACATCAGCGATCCCACCCTATGTCTACATATTTCCTTAATCTTACTGTTGGCGATGCAGCTTGACATGGCACATCGTATCAGACAATCTTTTGTTTACATGATTGCTGGCACCACTGTGTCCATGCATGTGCATGTTTGGTCCTCTACCTGCTGCTCTTTCGCCCTTTAGTGTCAGTGTGCTTTCCATACCGTAGCAGAGACTTCCTATGAAACGCTGCCATACGACTGCACATCACCCCATCTTTTGCTTGTATGTTATTTATTGTAACAATGACTGTCAATGTCCATATGGTGCTCTGTCAGTCCTATGAACTCGTTCAGCAAACCCCCTTCTGTTATGGATCATATTAATGCACTAGCGTTCTATCTGCTGT]

[+] EMBL AK065393             [ATGTACTGGCCTGTTTGTTGCACGGGATTTACTGTCACAGAGTTTTTAGGTTTTAGGCGATTTTCCCCGTGTTCATGTTTCCCTTTTGACAGTGGATCATTGCTTATCTTTGTTGTTCTTCTTTCAGTATATACTTCTTTCAGTAAATAGATGGTGGCTATTACATAGATGAAGCACACGGTCGTTAGTTAATGACAAATATCATTGCTTTTTTTTCCTGGTTCTGATTCATTATTGGATCATGTTTCGCCATTCAGAGTGTGTCCCGTGGTGTTTTCTTTTCATGCAAAACCATGTGGTTCATTTGTATTTTTGAGTCTTTCCTTAAGTGCATCTCTGTACGTTTACATGTTTTTTTCCCTTCATATCGATTTTTTTTTGGCGCAGGTGCTTATTGTCGCGGTCAGGTCCGTGCGATACGTTCGTTACTGTTGTGCTGCTGTTCCCTTTACCATCAGCTCCTGTTCAGGTTGCGGACCACATCTTCTGTGCCCGTACATGTCGGCTAAGTTCCTATATGGAAGGGGGTTGTGTGGTTAGGCCTGCTCGTCGACGGGATCGCCGATTGCTAGAGCGTAGCAGCGCTTCTCTTAGATCATCTTCCTCTAATTCAGCTGCCAGCGAATATGTTTGGGAGACTGTTGCTCCACCCCGTCAGGACGATGGATTTTTCCCTATCTACCCTGCATGGTATTCTTCAAAAAGACGGCAAATGCGTTCAAAAAAATTGGCCATGAAACGATTGGTGGCTGCAGGCAAAAAACCTTGCCGTATTGCTCCTGTCTCTTGCAACAAGTTTGACAGTGATTATGCCAAGTTTTTGAGAGAGACTTCAAAGGATAGGTGTGATTATGGCCCTCCTGAGTATCGCTGCCGTTTGTGCGCTGCTCAGTTCTGGTACCAGGAACGGTGCAAGAAAGATTCTGCTATTACCAAGCGCCGTGTCTGTTACAACCTTTGTTGCAAAGATGGCTTTCGATTTGCTGTGTGACATATCCCCAGCAAGCAGAGGCTGGAAGATCCGTGCAAAGATAGCAAGAATGTGGGACTACACTGGTACAGCTGACGATCTGCCTCCTATACATGTTGATCTGGTGCTTATTGATGAGAAGGGAAATGCAATGTATGCTGAAATTCCAGGCGTTGAGGCTGATAAGTTCAGACCACTTCTTCAGGAATCGAAAGTCTACACTTTTAGCAAGTTCCTTATTTTGCCTAGCAAACCTGCATACAAGCCCTTCCCTAACAAGTATATGATCAAGCTTACTCCATGGACAAACGTGGAACAGGTCAATGAAGTTCCTGCTGATTTCCCATCCCATGTGTTTAATTTGGTTCAATTCTCATATCTAAGCCTGCGCGTTGGGATGCAAGAGTACTTCACTGATGTGATCGGTATGATCATTGGGGTATCAAAGCTAGCCTATGTCCGAATGGCGTCTAAAACGTCAGACACACCTAAGAGGGTCATTGCTCTAAGGGATCTTGCGAACTGTGAGGTTAAACTTGTCCTATGGGGAGAGCATGCTCCCGACTTTGATGCTGATGCTGTTCATAGTGTTGGCCAAGATAATGCTGTCGTTGGTATCTTTGTTGATACTCTTATGAAAGCATATAATAATGAAGAAACTCTTAGTGGAGGATCAGCCTGCAAATGGTATTTAAATGAGGACATACCAGAGATAAACCAGTTCTTTGATAGCCTGGGTGATAGTGCTCCAAAGATCCAGTGGATATCAACCGGAGCAGAGTCCTTTGGTTCGTCACAACGCCCAGCACGGTTGGAGCATAAATCTGTTGCTGACCTTAAAAAGATTGATCCATGGGAAGCTGCGGGTGCTGGCTTCTCATGTACTGTGACCATAGCTAAGTTGAGCCCATCTCAGTCATGGTGGTTTTCATCCTGTTCCCGTTGTCATAGAGCCGCAACTGCATATGGATCTAGCTATAAATGCTCCAGCGGTTGCTCATCAGTTACTGCCATTCCAAAGTACCGTCTTTGCCTGATAGGAACCGATGGAACTAATTCAGCAGAGTTTGTGCTATTTGGACGTGTTGCGCAGCAAGTTGTTGGCCGTCCTGTTATGAATCTTATCAAATTTCAGGGCAGATCAGACAATATTCCTAAAGAAATTGCTGCTGTTGTTTCACAGAAATTTACCTTTGCTGTCTCTGTCACTGAGCGGAGCCTTATGCACAGGAATATATCTTTTCAAGTTAATGGAATCGAGACTTTCTTTGGAAGACAGGGTTCTATTCCGCAGCCTAGGGAATAGGGTCCATCTGCAGGCCCTTCTACTCCTTTGGCTCTTGCTGCTTCTGGTATGGATAAGGATGACGCCTCTCAATCTCATGAGTCAACCCCGGTCGATTCATCTACTTCGACTGCTGATCCAGTCGATGAACTTCCTGGTGACAGCAAGAAGCGGAAATCCATTGTCCGTCATCCTCTAGCAGCACAGAAAAAATTGACCTTTGAAACAGCTCCATCCAGCAAAGAAAACACCAGCCCGGTTGACCCTCCTACTAGTTCTTCTCGCACTGATGACCAAGCTGCTGATAAGCAACATGTTGTGCCTCATGAGGTTGATGTTTCTTAGATTGCAGCTGCCTCTGCTAAACCAAATACTCAGGTCAAAGATATCCTACCAACTGAAGCCAAAAAGAAAAGTGTTGATCCAGGCTCTACAGGCACACTCAAGACTAAGCCTCCTGTACCGAAAGGGAACTAAATTGCTCACCTTAGCTTTTGTGCTGATGGGAACAATACCCTACATCAGCGATCCCACCCTATGTCTACATATTTCCTTAATCTTACTGTTGGCGATGCAGCTTGACATGGCACATCGTATCAGACAATCTTTTGTTTACATGATTGCTGGCACCACTGTGTCCATGCATGTGCATGTTTGGTCCTCTACCTGCTGCTCTTTCGCCCTTTAGTGTCAGTGTGCTTTCCATACCGTAGCAGAGACTTCCTATGAAACGCTGCCATACGACTGCACATCACCCCATCTTTTGCTTGTATGTTATTTATTGTAACAATGACTGTCAATGTCCATATGGTGCTCTGTCAGTCCTATGAACTCGTTCAGCAAACCCCCTTCTGTTATGGATCATATTAATGCACTAGCGTTCTATCTGCTGT]
[+] EMBL CB668463             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGACCACTTCTTCAGGAATCGAAAGTCTACACTTTTAGCAAGTTCCTTATTTTGCCTAGCAAACCTGCATACAAGCCCTTCCCTAACAAGTATATGATCAAGCTTACTCCATGGACAAACGTGGAACAGGTCAATGAAGTTCCTGCTGATTTCCCATCCCATGTGTTTAATTTGGTTCAATTCTCATATCTAAGCCTGCGCGTTGGGATGCAAGAGTACTTCACTGATGTGATCGGTATGATCATTGGGGTATCAAAGCTAGCCTATGTCCGAATGGCGTCTAAAACGTCAGACACACCTAAGAGGGTCATTGCTCTAAGGGATCTTGCGAACTGTGAGGTTAAACTTGTCCTATGGGGAGAGCATGCTCCCGACTTTGATGCTGATGCTGATCATAGTGTTGGCCAAGATAATGCTGTCGTTGGTATCTTTGTTGATACTCTTATGAAAGCATATAATAATGAAGAAACTCTTAGTGGAGGATCAGCCTGCAAATGGTATTTAAATGAGGACATACCAGAGATAAACCAGTTCTTTGATAGCCTGGGTGATAGTGCTCCAAAGATCCAGTGGATATCAACCGGAGCAGAGTCCTTTGGTTCGTCACAACGCCCAGCACGGTTGGAGCATAAATCTGTTGCTGACCTTAAAAAGATTGATCCATGGGAAGCTGCGGGTGCTGGCTTCTCATGTACTGTGACCATAGCTAAGTTGAGCCCATCTCAGTCATGGTGGTTTTCATCCTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB668464             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GATGACGCCTCTCAATCTCATGAGTCAACCCCGGTCGATTCATCTACTTCGACTGCTGATCCAGTCGATGAACTTCCTGGTGACAGCAAGAAGCGGAAATCCATTGTCCGTCATCCTCTAGCAGCACAGAAAAAATTGACCTTTGAAACAGCTCCATCCAGCAAAGAAAACACCAGCCCGGTTGACCCTCCTACTAGTTCTTCTCGCACTGATGACCAAGCTGCTGATAAGCAACATGTTGTGCCTCATGAGGTTGATGTTTCTTAGATTGCAGCTGCCTCTGCTAAACCAAATACTCAGGTCAAAGATATCCTACCAACTGAAGCCAAAAAGAAAAGTGTTGATCCAGGCTCTACAGGCACACGCAAGACTAAGCCTCCTGTACCGAAAGGGAACTAAATTGCTCACCTTAGCTTTTGTGCTGATGGGAACAATACCCTACATCAGCGATCCCACCCTATGTCTACATATTTCCTTAATCTTACTGTTGGCGATGCAGCTTGACATGGCACATCGTATCAGACAATCTTTTGTTTACATGATTGCTGGCACCACTGTGTCCATGCATGTGCATGTTTGGTCCTCTACCTGCTGCTCTTTCGCCCTTTAGTGTCAGTGTGCTTTCCATACCGTAGCAGAGACTTCCTATGAAACGCTGCCATACGACTGCACATCACCCCATCTTTTGCTTGTATGTTATTTATTGTAACCATGACTGTCAATGTCCATAGGGTGCTCTGTCAGTCCTATGAACTCGTTCAGCAAtaaaaagga                                         ]




>consensus_8700#0
ATGTACTGGCCTGTTTGTTGCACGGGATTTACTGTCACAGAGTTTTTAGGTTTTAGGCGA
TTTTCCCCGTGTTCATGTTTCCCTTTTGACAGTGGATCATTGCTTATCTTTGTTGTTCTT
CTTTCAGTATATACTTCTTTCAGTAAATAGATGGTGGCTATTACATAGATGAAGCACACG
GTCGTTAGTTAATGACAAATATCATTGCTTTTTTTTCCTGGTTCTGATTCATTATTGGAT
CATGTTTCGCCATTCAGAGTGTGTCCCGTGGTGTTTTCTTTTCATGCAAAACCATGTGGT
TCATTTGTATTTTTGAGTCTTTCCTTAAGTGCATCTCTGTACGTTTACATGTTTTTTTCC
CTTCATATCGATTTTTTTTTGGCGCAGGTGCTTATTGTCGCGGTCAGGTCCGTGCGATAC
GTTCGTTACTGTTGTGCTGCTGTTCCCTTTACCATCAGCTCCTGTTCAGGTTGCGGACCA
CATCTTCTGTGCCCGTACATGTCGGCTAAGTTCCTATATGGAAGGGGGTTGTGTGGTTAG
GCCTGCTCGTCGACGGGATCGCCGATTGCTAGAGCGTAGCAGCGCTTCTCTTAGATCATC
TTCCTCTAATTCAGCTGCCAGCGAATATGTTTGGGAGACTGTTGCTCCACCCCGTCAGGA
CGATGGATTTTTCCCTATCTACCCTGCATGGTATTCTTCAAAAAGACGGCAAATGCGTTC
AAAAAAATTGGCCATGAAACGATTGGTGGCTGCAGGCAAAAAACCTTGCCGTATTGCTCC
TGTCTCTTGCAACAAGTTTGACAGTGATTATGCCAAGTTTTTGAGAGAGACTTCAAAGGA
TAGGTGTGATTATGGCCCTCCTGAGTATCGCTGCCGTTTGTGCGCTGCTCAGTTCTGGTA
CCAGGAACGGTGCAAGAAAGATTCTGCTATTACCAAGCGCCGTGTCTGTTACAACCTTTG
TTGCAAAGATGGCTTTCGATTTGCTGTGTGACATATCCCCAGCAAGCAGAGGCTGGAAGA
TCCGTGCAAAGATAGCAAGAATGTGGGACTACACTGGTACAGCTGACGATCTGCCTCCTA
TACATGTTGATCTGGTGCTTATTGATGAGAAGGGAAATGCAATGTATGCTGAAATTCCAG
GCGTTGAGGCTGATAAGTTCAGACCACTTCTTCAGGAATCGAAAGTCTACACTTTTAGCA
AGTTCCTTATTTTGCCTAGCAAACCTGCATACAAGCCCTTCCCTAACAAGTATATGATCA
AGCTTACTCCATGGACAAACGTGGAACAGGTCAATGAAGTTCCTGCTGATTTCCCATCCC
ATGTGTTTAATTTGGTTCAATTCTCATATCTAAGCCTGCGCGTTGGGATGCAAGAGTACT
TCACTGATGTGATCGGTATGATCATTGGGGTATCAAAGCTAGCCTATGTCCGAATGGCGT
CTAAAACGTCAGACACACCTAAGAGGGTCATTGCTCTAAGGGATCTTGCGAACTGTGAGG
TTAAACTTGTCCTATGGGGAGAGCATGCTCCCGACTTTGATGCTGATGCTGTTCATAGTG
TTGGCCAAGATAATGCTGTCGTTGGTATCTTTGTTGATACTCTTATGAAAGCATATAATA
ATGAAGAAACTCTTAGTGGAGGATCAGCCTGCAAATGGTATTTAAATGAGGACATACCAG
AGATAAACCAGTTCTTTGATAGCCTGGGTGATAGTGCTCCAAAGATCCAGTGGATATCAA
CCGGAGCAGAGTCCTTTGGTTCGTCACAACGCCCAGCACGGTTGGAGCATAAATCTGTTG
CTGACCTTAAAAAGATTGATCCATGGGAAGCTGCGGGTGCTGGCTTCTCATGTACTGTGA
CCATAGCTAAGTTGAGCCCATCTCAGTCATGGTGGTTTTCATCCTGTTCCCGTTGTCATA
GAGCCGCAACTGCATATGGATCTAGCTATAAATGCTCCAGCGGTTGCTCATCAGTTACTG
CCATTCCAAAGTACCGTCTTTGCCTGATAGGAACCGATGGAACTAATTCAGCAGAGTTTG
TGCTATTTGGACGTGTTGCGCAGCAAGTTGTTGGCCGTCCTGTTATGAATCTTATCAAAT
TTCAGGGCAGATCAGACAATATTCCTAAAGAAATTGCTGCTGTTGTTTCACAGAAATTTA
CCTTTGCTGTCTCTGTCACTGAGCGGAGCCTTATGCACAGGAATATATCTTTTCAAGTTA
ATGGAATCGAGACTTTCTTTGGAAGACAGGGTTCTATTCCGCAGCCTAGGGAATAGGGTC
CATCTGCAGGCCCTTCTACTCCTTTGGCTCTTGCTGCTTCTGGTATGGATAAGGATGACG
CCTCTCAATCTCATGAGTCAACCCCGGTCGATTCATCTACTTCGACTGCTGATCCAGTCG
ATGAACTTCCTGGTGACAGCAAGAAGCGGAAATCCATTGTCCGTCATCCTCTAGCAGCAC
AGAAAAAATTGACCTTTGAAACAGCTCCATCCAGCAAAGAAAACACCAGCCCGGTTGACC
CTCCTACTAGTTCTTCTCGCACTGATGACCAAGCTGCTGATAAGCAACATGTTGTGCCTC
ATGAGGTTGATGTTTCTTAGATTGCAGCTGCCTCTGCTAAACCAAATACTCAGGTCAAAG
ATATCCTACCAACTGAAGCCAAAAAGAAAAGTGTTGATCCAGGCTCTACAGGCACACTCA
AGACTAAGCCTCCTGTACCGAAAGGGAACTAAATTGCTCACCTTAGCTTTTGTGCTGATG
GGAACAATACCCTACATCAGCGATCCCACCCTATGTCTACATATTTCCTTAATCTTACTG
TTGGCGATGCAGCTTGACATGGCACATCGTATCAGACAATCTTTTGTTTACATGATTGCT
GGCACCACTGTGTCCATGCATGTGCATGTTTGGTCCTCTACCTGCTGCTCTTTCGCCCTT
TAGTGTCAGTGTGCTTTCCATACCGTAGCAGAGACTTCCTATGAAACGCTGCCATACGAC
TGCACATCACCCCATCTTTTGCTTGTATGTTATTTATTGTAACAATGACTGTCAATGTCC
ATATGGTGCTCTGTCAGTCCTATGAACTCGTTCAGCAAACCCCCTTCTGTTATGGATCAT
ATTAATGCACTAGCGTTCTATCTGCTGT

consensusID : consensus_8700#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 637
fasta sequence 
                              [TACGTTCGTTACTGTTGTGCTGCTGTTCCCTTTACCATCAGCTCCTGTTCAGGTTGCGGACCACATCTTCTGTGCCCGTACATGTCGGCTAAGATGGCTTTCGATTTGCTGTGTGACATATCCCCAGCAAGCAGAGGCTGGAAGATCCGTGCAAAGATAGCAAGAATGTGGGACTACACTGGTACAGCTGACGATCTGCCTCCTATACATGTTGATCTGGTGCTTATTGATGAGAAGGGAAATGCAATGTATGCTGAAATTCCAGGCGTTGAGGCTGATAAGTTCAGACCACTTCTTCAGGAATCGAAAGTCTACACTTTTAGCAAGTTCCTTATTTTGCCTAGCAAACCTGCATACAAGCCCTTCCCTAACAAGTATATGATCAAGCTTACTCCATGGACAAACGTGGAACAGATGTGATCGGTATGATCATTGGGGTATCCAAGCTAGCCTATGTCCGAATGGCGTCTAAAACGTCAGACACACCTAAGAGGGTCATNGCTCTAAGGGATCTTGCGAACTGTGAGGTTAAACTTGTCCTATGGGGAGAGCATGCTCCCCGACTTTGATGCTGATGCTGTNCATAGTGTTGGGCCAGGATAATGCTGTCGTGGGTATCTTGGTGATACTCTTATTA]

[+] EMBL CA753589             [TACGTTCGTTACTGTTGTGCTGCTGTTCCCTTTACCATCAGCTCCTGTTCAGGTTGCGGACCACATCTTCTGTGCCCGTACATGTCGGCTAAGATGGCTTTCGATTTGCTGTGTGACATATCCCCAGCAAGCAGAGGCTGGAAGATCCGTGCAAAGATAGCAAGAATGTGGGACTACACTGGTACAGCTGACGATCTGCCTCCTATACATGTTGATCTGGTGCTTATTGATGAGAAGGGAAATGCAATGTATGCTGAAATTCCAGGCGTTGAGGCTGATAAGTTCAGACCACTTCTTCAGGAATCGAAAGTCTACACTTTTAGCAAGTTCCTTATTTTGCCTAGCAAACCTGCATACAAGCCCTTCCCTAACAAGTATATGATCAAGCTTACTCCATGGACAAACGTGGAACAGATGTGATCGGTATGATCATTGGGGTATCCAAGCTAGCCTATGTCCGAATGGCGTCTAAAACGTCAGACACACCTAAGAGGGTCATNGCTCTAAGGGATCTTGCGAACTGTGAGGTTAAACTTGTCCTATGGGGAGAGCATGCTCCCCGACTTTGATGCTGATGCTGTNCATAGTGTTGGGCCAGGATAATGCTGTCGTGGGTATCTTGGTGATACTCTTATTA]




>consensus_8700#1
TACGTTCGTTACTGTTGTGCTGCTGTTCCCTTTACCATCAGCTCCTGTTCAGGTTGCGGA
CCACATCTTCTGTGCCCGTACATGTCGGCTAAGATGGCTTTCGATTTGCTGTGTGACATA
TCCCCAGCAAGCAGAGGCTGGAAGATCCGTGCAAAGATAGCAAGAATGTGGGACTACACT
GGTACAGCTGACGATCTGCCTCCTATACATGTTGATCTGGTGCTTATTGATGAGAAGGGA
AATGCAATGTATGCTGAAATTCCAGGCGTTGAGGCTGATAAGTTCAGACCACTTCTTCAG
GAATCGAAAGTCTACACTTTTAGCAAGTTCCTTATTTTGCCTAGCAAACCTGCATACAAG
CCCTTCCCTAACAAGTATATGATCAAGCTTACTCCATGGACAAACGTGGAACAGATGTGA
TCGGTATGATCATTGGGGTATCCAAGCTAGCCTATGTCCGAATGGCGTCTAAAACGTCAG
ACACACCTAAGAGGGTCATNGCTCTAAGGGATCTTGCGAACTGTGAGGTTAAACTTGTCC
TATGGGGAGAGCATGCTCCCCGACTTTGATGCTGATGCTGTNCATAGTGTTGGGCCAGGA
TAATGCTGTCGTGGGTATCTTGGTGATACTCTTATTA

consensusID : consensus_8700#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 255
fasta sequence 
                              [GCCGAGGTAAAGAGGGAAGGGGACGGCGTGGCATTTTCTGGATGCACTCGCATTTCCTCTTCGTCGTTGGCCGCGCCATTCCGTGCGATTTTTGCTCCGATATCAGCGGCTCTATTGTTTTGCCCCCCTGATTTGGTGCTTATTGTCGCGGTCAGGTCCGTGCGATACGTTTGTTGCTGTTGTGCTGCTGTTCCCTCTACCATCAGCTCCTGTTCAGGTTGCGGACCGCATCTTCTGTGCCTGTACCTGCCCGGC]

[-] EMBL AW070024             [GCCGAGGTAAAGAGGGAAGGGGACGGCGTGGCATTTTCTGGATGCACTCGCATTTCCTCTTCGTCGTTGGCCGCGCCATTCCGTGCGATTTTTGCTCCGATATCAGCGGCTCTATTGTTTTGCCCCCCTGATTTGGTGCTTATTGTCGCGGTCAGGTCCGTGCGATACGTTTGTTGCTGTTGTGCTGCTGTTCCCTCTACCATCAGCTCCTGTTCAGGTTGCGGACCGCATCTTCTGTGCCTGTACCTGCCCGGC]




>consensus_8700#2
GCCGAGGTAAAGAGGGAAGGGGACGGCGTGGCATTTTCTGGATGCACTCGCATTTCCTCT
TCGTCGTTGGCCGCGCCATTCCGTGCGATTTTTGCTCCGATATCAGCGGCTCTATTGTTT
TGCCCCCCTGATTTGGTGCTTATTGTCGCGGTCAGGTCCGTGCGATACGTTTGTTGCTGT
TGTGCTGCTGTTCCCTCTACCATCAGCTCCTGTTCAGGTTGCGGACCGCATCTTCTGTGC
CTGTACCTGCCCGGC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8700#0      ATGTACTGGCCTGTTTGTTGCACGGGATTTACTGTCACAGAGTTTTTAGGTTTTAGGCGA 60
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      TTTTCCCCGTGTTCATGTTTCCCTTTTGACAGTGGATCATTGCTTATCTTTGTTGTTCTT 120
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      CTTTCAGTATATACTTCTTTCAGTAAATAGATGGTGGCTATTACATAGATGAAGCACACG 180
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      GTCGTTAGTTAATGACAAATATCATTGCTTTTTTTTCCTGGTTCTGATTCATTATTGGAT 240
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      CATGTTTCGCCATTCAGAGTGTGTCCCGTGGTGTTTTCTTTTCATGCAAAACCATGTGGT 300
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      TCATTTGTATTTTTGAGTCTTTCCTTAAGTGCATCTCTGTACGTTTACATGTTTTTTTCC 360
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      CTTCATATCGATTTTTTTTTGGCGCAGGTGCTTATTGTCGCGGTCAGGTCCGTGCGATAC 420
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      GTTCGTTACTGTTGTGCTGCTGTTCCCTTTACCATCAGCTCCTGTTCAGGTTGCGGACCA 480
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      CATCTTCTGTGCCCGTACATGTCGGCTAAGTTCCTATATGGAAGGGGGTTGTGTGGTTAG 540
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      GCCTGCTCGTCGACGGGATCGCCGATTGCTAGAGCGTAGCAGCGCTTCTCTTAGATCATC 600
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      TTCCTCTAATTCAGCTGCCAGCGAATATGTTTGGGAGACTGTTGCTCCACCCCGTCAGGA 660
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      CGATGGATTTTTCCCTATCTACCCTGCATGGTATTCTTCAAAAAGACGGCAAATGCGTTC 720
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      AAAAAAATTGGCCATGAAACGATTGGTGGCTGCAGGCAAAAAACCTTGCCGTATTGCTCC 780
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      TGTCTCTTGCAACAAGTTTGACAGTGATTATGCCAAGTTTTTGAGAGAGACTTCAAAGGA 840
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      TAGGTGTGATTATGGCCCTCCTGAGTATCGCTGCCGTTTGTGCGCTGCTCAGTTCTGGTA 900
consensus_8700#1      ---------------------TACGT-TCGTTACTGTTGTGCTGCTGTTCCCTT-TACCA 37
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      CCAGGAACGGTGCAAGAAAGATTCTGCTATTACCAAGCGCCGTGTCTGTTACAACCTTTG 960
consensus_8700#1      TCAGCTCCTGTTCAGGTTGCGGACCACATCTTCTGTGC-CCGTACATGTCG--------- 87
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      TTGCAAAGATGGCTTTCGATTTG--CTGTGTGACATATCCCCAGCAAGCAGAGGCTGGAA 1018
consensus_8700#1      --GCTAAGATGGCTTTCGATTTG--CTGTGTGACATATCCCCAGCAAGCAGAGGCTGGAA 143
consensus_8700#2      --GCCGAGGTAAAGAGGGAAGGGGACGGCGTGGCATTTTCTGGATGCACTCGCATTTCCT 58
                        **  ** *       **   *  * * *** *** * *        *      *    

consensus_8700#0      GATCCGTGCAAAGATAGCAAGAATGTGGGACTAC-ACTGGTACAGCTGACGATCTGCCTC 1077
consensus_8700#1      GATCCGTGCAAAGATAGCAAGAATGTGGGACTAC-ACTGGTACAGCTGACGATCTGCCTC 202
consensus_8700#2      CTTCGTCGTTGGCCGCGCCATTCCGTGCGATTTTTGCTCCGATATCAGCGGCTCTATTGT 118
                        **   *        ** *    *** ** *    **   * * * *  * ***     

consensus_8700#0      CTATACATGTTGATCTGGTGCTTATTGATGAGA--AGGGAAATGCAAT--GTATGCTGAA 1133
consensus_8700#1      CTATACATGTTGATCTGGTGCTTATTGATGAGA--AGGGAAATGCAAT--GTATGCTGAA 258
consensus_8700#2      TTTGCCCCCCTGATTTGGTGCTTATTGTCGCGGTCAGGTCCGTGCGATACGTTTGTTGCT 178
                       *   *    **** ************  * *   ***    *** **  ** ** **  

consensus_8700#0      ATTCCAGGCGTTGAGGCTGATAAGTTCAGACCACTTCTTCAGGAATCGAAAGTCTACACT 1193
consensus_8700#1      ATTCCAGGCGTTGAGGCTGATAAGTTCAGACCACTTCTTCAGGAATCGAAAGTCTACACT 318
consensus_8700#2      GTTGT-GCTGCTGTTCCCTCTACCATCAG--CTCCTGTTCAGGTTGCGGA---CCGCATC 232
                       **   *  * **   *   **   ****  * * * ******   ** *   *  **  

consensus_8700#0      TTTAGCAAGTTCCTTATTTTGCCTAGCAAACCTGCATACAAGCCCTTCCCTAACAAGTAT 1253
consensus_8700#1      TTTAGCAAGTTCCTTATTTTGCCTAGCAAACCTGCATACAAGCCCTTCCCTAACAAGTAT 378
consensus_8700#2      TTCTGTG----CCTGTACCTGCCCGGC--------------------------------- 255
                      **  *      ***     ****  **                                 

consensus_8700#0      ATGATCAAGCTTACTCCATGGACAAACGTGGAACAGGTCAATGAAGTTCCTGCTGATTTC 1313
consensus_8700#1      ATGATCAAGCTTACTCCATGGACAAACGTGGAACAG------------------------ 414
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      CCATCCCATGTGTTTAATTTGGTTCAATTCTCATATCTAAGCCTGCGCGTTGGGATGCAA 1373
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      GAGTACTTCACTGATGTGATCGGTATGATCATTGGGGTATCAAAGCTAGCCTATGTCCGA 1433
consensus_8700#1      -------------ATGTGATCGGTATGATCATTGGGGTATCCAAGCTAGCCTATGTCCGA 461
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      ATGGCGTCTAAAACGTCAGACACACCTAAGAGGGTCATTGCTCTAAGGGATCTTGCGAAC 1493
consensus_8700#1      ATGGCGTCTAAAACGTCAGACACACCTAAGAGGGTCATNGCTCTAAGGGATCTTGCGAAC 521
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      TGTGAGGTTAAACTTGTCCTATGGGGAGAGCATGCTCCC-GACTTTGATGCTGATGCTGT 1552
consensus_8700#1      TGTGAGGTTAAACTTGTCCTATGGGGAGAGCATGCTCCCCGACTTTGATGCTGATGCTGT 581
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      TCATAGTGTTGG-CCAAGATAATGCTGTCGTTGGTATCTTTGTTGATACTCTTATGAAAG 1611
consensus_8700#1      NCATAGTGTTGGGCCAGGATAATGCTGTCGTGGGTATCTT-GGTGATACTCTTATTA--- 637
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      CATATAATAATGAAGAAACTCTTAGTGGAGGATCAGCCTGCAAATGGTATTTAAATGAGG 1671
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      ACATACCAGAGATAAACCAGTTCTTTGATAGCCTGGGTGATAGTGCTCCAAAGATCCAGT 1731
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      GGATATCAACCGGAGCAGAGTCCTTTGGTTCGTCACAACGCCCAGCACGGTTGGAGCATA 1791
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      AATCTGTTGCTGACCTTAAAAAGATTGATCCATGGGAAGCTGCGGGTGCTGGCTTCTCAT 1851
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      GTACTGTGACCATAGCTAAGTTGAGCCCATCTCAGTCATGGTGGTTTTCATCCTGTTCCC 1911
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      GTTGTCATAGAGCCGCAACTGCATATGGATCTAGCTATAAATGCTCCAGCGGTTGCTCAT 1971
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      CAGTTACTGCCATTCCAAAGTACCGTCTTTGCCTGATAGGAACCGATGGAACTAATTCAG 2031
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      CAGAGTTTGTGCTATTTGGACGTGTTGCGCAGCAAGTTGTTGGCCGTCCTGTTATGAATC 2091
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      TTATCAAATTTCAGGGCAGATCAGACAATATTCCTAAAGAAATTGCTGCTGTTGTTTCAC 2151
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      AGAAATTTACCTTTGCTGTCTCTGTCACTGAGCGGAGCCTTATGCACAGGAATATATCTT 2211
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      TTCAAGTTAATGGAATCGAGACTTTCTTTGGAAGACAGGGTTCTATTCCGCAGCCTAGGG 2271
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      AATAGGGTCCATCTGCAGGCCCTTCTACTCCTTTGGCTCTTGCTGCTTCTGGTATGGATA 2331
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      AGGATGACGCCTCTCAATCTCATGAGTCAACCCCGGTCGATTCATCTACTTCGACTGCTG 2391
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      ATCCAGTCGATGAACTTCCTGGTGACAGCAAGAAGCGGAAATCCATTGTCCGTCATCCTC 2451
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      TAGCAGCACAGAAAAAATTGACCTTTGAAACAGCTCCATCCAGCAAAGAAAACACCAGCC 2511
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      CGGTTGACCCTCCTACTAGTTCTTCTCGCACTGATGACCAAGCTGCTGATAAGCAACATG 2571
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      TTGTGCCTCATGAGGTTGATGTTTCTTAGATTGCAGCTGCCTCTGCTAAACCAAATACTC 2631
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      AGGTCAAAGATATCCTACCAACTGAAGCCAAAAAGAAAAGTGTTGATCCAGGCTCTACAG 2691
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      GCACACTCAAGACTAAGCCTCCTGTACCGAAAGGGAACTAAATTGCTCACCTTAGCTTTT 2751
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      GTGCTGATGGGAACAATACCCTACATCAGCGATCCCACCCTATGTCTACATATTTCCTTA 2811
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      ATCTTACTGTTGGCGATGCAGCTTGACATGGCACATCGTATCAGACAATCTTTTGTTTAC 2871
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      ATGATTGCTGGCACCACTGTGTCCATGCATGTGCATGTTTGGTCCTCTACCTGCTGCTCT 2931
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      TTCGCCCTTTAGTGTCAGTGTGCTTTCCATACCGTAGCAGAGACTTCCTATGAAACGCTG 2991
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      CCATACGACTGCACATCACCCCATCTTTTGCTTGTATGTTATTTATTGTAACAATGACTG 3051
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      TCAATGTCCATATGGTGCTCTGTCAGTCCTATGAACTCGTTCAGCAAACCCCCTTCTGTT 3111
consensus_8700#1      ------------------------------------------------------------
consensus_8700#2      ------------------------------------------------------------
                                                                                  

consensus_8700#0      ATGGATCATATTAATGCACTAGCGTTCTATCTGCTGT 3148
consensus_8700#1      -------------------------------------
consensus_8700#2      -------------------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)