cluster # 8840

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Oryza sativa
cluster # 8840 cluster # 8840 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8840#0 length = 1765 sequences # 6
consensusID : consensus_8840#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1765
fasta sequence
                              [GGAAACAAGTAGAGGAATCAATTGAGAAGCATAGGCAGGCTGTGAAAGAGGTGATTGAGCATTATACTGGAATATCCTCTCAAATCCCATCTGGATCTGCAATCGATGAGCAGCTGCGTTCATATTTCCTTGCCATCAAAGCTGTTGAGGAGTCTCCGAGTCCCTTCCAAGATGGTGCAGCAAGCCAGACACCATCTGTTGAAAGTGCCGATGTGGATGCATCTGCAGCTACTGCAGGGAGACAGGTAGCTACTCCACCAAGGCCTGCTCAAGTTAAAGTGGTGGAGGAGAGAGCAGTTTCTACTTTGCCCAAACCAAGCACTGAAGTACGTAGACCAGGAGGAAGGAGACCACTTGTTCGACCTTCACTTGAACGAGTTGAAGAACCCCAAGCTGATATTGATACAACAGTAGTTGAAGGTTCCACAGAGAAAGGCGGCTTGTTGATGGAGCGTGAAACTCCTGGTGGTGTATCTGCGTTACAGCCATCAAGTCGTAAACGTCTAATTCCATCACCACAAACGAGAGATGATGCTTCACAAGGAGAGACAACGGATGCCAATCCACCACTGAAGAAACCCAAAGAAGGATCTTCACAATGTACTAGTGAGCTAAAAACTGAACAGTCACCTCATGAAGATGTCATGGCACCTGTTCCTGTGCTACCATCTACAGAGTTAGATGAGCAACAGCCTGGAGAAGAGATGGACACCGATCAGTCTTCCTTGCCAGTTGAAGAGGTTGAGGAAACAAGGGAGGATGACTTGGGTGATAAGGATGACATGGAAACACATATAGACGCTTCAATGGACATCCAAGGACAAGATGCAGAAACTGGTATTGATAATGATGCAACTACTGTGGAAGATGTGCCAGTCAAGTCAGAAGCGGTTATGGAATCACTGGAGGAAGACCTGAAAACTGAGGATGGGAAGGAAGAGGGTCAGTTTACTGCAACCACTGATGTTGAAGATGAGAGGGAGGAGGGAGAGTTGCCAGATGAACCAGAACAACCAGACAGCACTCCCCCTGTGCTGGATGTTGGTGAGCAAGCCGGTGATTCTTTCAGGGCGGCATCTCCAGCAGGACCAACTGAAAAGAGTGATGTTGACATGCCAGAAGAAACTGGAGAAGGTGATGGTACCATGGAATCAGACCAAAGCCCTGTACCACAATCTGGTGGAGCAGATGCGTCACCGAGCCAAATGGCTGATGCGTCACCAAGCCCTGCACGTGAACCTTCTCCTAACCCAGTCCAAGCTGGTGCACCTCCTGAACAGCAGAATCCCACCCCTCCTAACCCAGTCCAAGCTGGTGCATCTTCTGAACAGCAGAATCCCGCCACTGCAGCAGAAGGTGTTGAAACTCGTAGTACCAGAACAATCAACCTAACTGAGAGAGCGAGGCAAAACCGGCAAGCCAGGATTCTTCGCTCAGCCACTCAACAGAATGCAAGGGGCCGTGGCAACCAGTCTCTTACATACAGGAAAGATGGCGGCCGAGGAACACGGGGTCGTGGTGGGCGTGGTCAGTCGTAGAGAATTTAGGTTTGTCTTTGCTCAAGCGCGGAGACTAGTTTTTTGCAAAGGACATACTGAATCAGGGCGGCATCATATTCATTTTGTAGCACTATCAGAATTGCGAGCGTACATGTTACTCTGCTTAGACAAATTCATGTGGCTAAGCAGCGCTTATTAAAATGTTCTCATTGCCCGTGCGGATTGCCAGATGACCTATATTTAAATTGAACTCTAGTTGACAAAGA]

[+] EMBL AK060525             [GGAAACAAGTAGAGGAATCAATTGAGAAGCATAGGCAGGCTGTGAAAGAGGTGATTGAGCATTATACTGGAATATCCTCTCAAATCCCATCTGGATCTGCAATCGATGAGCAGCTGCGTTCATATTTCCTTGCCATCAAAGCTGTTGAGGAGTCTCCGAGTCCCTTCCAAGATGGTGCAGCAAGCCAGACACCATCTGTTGAAAGTGCCGATGTGGATGCATCTGCAGCTACTGCAGGGAGACAGGTAGCTACTCCACCAAGGCCTGCTCAAGTTAAAGTGGTGGAGGAGAGAGCAGTTTCTACTTTGCCCAAACCAAGCACTGAAGTACGTAGACCAGGAGGAAGGAGACCACTTGTTCGACCTTCACTTGAACGAGTTGAAGAACCCCAAGCTGATATTGATACAACAGTAGTTGAAGGTTCCACAGAGAAAGGCGGCTTGTTGATGGAGCGTGAAACTCCTGGTGGTGTATCTGCGTTACAGCCATCAAGTCGTAAACGTCTAATTCCATCACCACAAACGAGAGATGATGCTTCACAAGGAGAGACAACGGATGCCAATCCACCACTGAAGAAACCCAAAGAAGGATCTTCACAATGTACTAGTGAGCTAAAAACTGAACAGTCACCTCATGAAGATGTCATGGCACCTGTTCCTGTGCTACCATCTACAGAGTTAGATGAGCAACAGCCTGGAGAAGAGATGGACACCGATCAGTCTTCCTTGCCAGTTGAAGAGGTTGAGGAAACAAGGGAGGATGACTTGGGTGATAAGGATGACATGGAAACACATATAGACGCTTCAATGGACATCCAAGGACAAGATGCAGAAACTGGTATTGATAATGATGCAACTACTGTGGAAGATGTGCCAGTCAAGTCAGAAGCGGTTATGGAATCACTGGAGGAAGACCTGAAAACTGAGGATGGGAAGGAAGAGGGTCAGTTTACTGCAACCACTGATGTTGAAGATGAGAGGGAGGAGGGAGAGTTGCCAGATGAACCAGAACAACCAGACAGCACTCCCCCTGTGCTGGATGTTGGTGAGCAAGCCGGTGATTCTTTCAGGGCGGCATCTCCAGCAGGACCAACTGAAAAGAGTGATGTTGACATGCCAGAAGAAACTGGAGAAGGTGATGGTACCATGGAATCAGACCAAAGCCCTGTACCACAATCTGGTGGAGCAGATGCGTCACCGAGCCAAATGGCTGATGCGTCACCAAGCCCTGCACGTGAACCTTCTCCTAACCCAGTCCAAGCTGGTGCACCTCCTGAACAGCAGAATCCCACCCCTCCTAACCCAGTCCAAGCTGGTGCATCTTCTGAACAGCAGAATCCCGCCACTGCAGCAGAAGGTGTTGAAACTCGTAGTACCAGAACAATCAACCTAACTGAGAGAGCGAGGCAAAACCGGCAAGCCAGGATTCTTCGCTCAGCCACTCAACAGAATGCAAGGGGCCGTGGCAACCAGTCTCTTACATACAGGAAAGATGGCGGCCGAGGAACACGGGGTCGTGGTGGGCGTGGTCAGTCGTAGAGAATTTAGGTTTGTCTTTGCTCAAGCGCGGAGGCTAGTTTTTTGCAAAGGACATACTGAATCAGGGCGGCATCATATTCATTTTGTAGCACTATCAGAATTGCGAGCGTACATGTTACTCTGCTTAGACAAATTCATGTGGCTAAGCAGCGCTTATTAAAATGT                                                              ]
[-] EMBL CB675995             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAACTGGTATTGATAATGATGCAACTACTGTGGAAGATGTGCCAGTCAAGTCAGAAGCGGTTATGGAATCACTGGAGGAAGACCTGAAAACTGAGGATGGGAAGGAAGAGGGTCAGTTTACTGCAACCACTGATGTTGAAGATGAGAGGGAGGAGGGAGAGTTGCCAGATGAACCAGAACAACCAGACAGCACTCCCCCTGTGCTGGATGTTGGTGAGCAAGCCGGTGATTCTTTCAGGGCGGCATCTCCAGCAGGACCAACTGAAAAGAGTGATGTTGACATGCCAGAAGAAACTGGAGAAGGTGATGGTACCATGGAATCAGACCAAAGCCCTGTACCACAATCTGGTGGAGCAGATGCGTCACCGAGCCAAATGGCTGATGCGTCACCAAGCCCTGCACGTGAACCTTCTCCTAACCCAGTCCAAGCTGGTGCACCTCCTGAACAGCAGAATCCCACCCCTCCTAACCCAGTCCAAGCTGGTGCATCTTCTGAACAGCAGAATCCCGCCACTGCAGCAGAAGGTGTTGAAACTCGTAGTACCAGAACAATCAACCTAACTGAGAGAGCGAGGCAAAACCGGCAAGCCAGGATTCTTCGCTCAGCCACTCAACAGAATGCAAGGGGCCGTGGCAACCAGTCTCTTACATACAGGAAAGATGGCGGCCGAGGAACACGGGGTCGTGGTGGGCGTGGTCAGTCGTAGAGAATTTAGGTTTGTCTTTGCTCAAGCGCGGAGACTAGTTTTTTGCAAAGGACATACTGAATCAGGGCGGCATCATATTCATTTTGTAGCACTATCAGA                                                                                                                                ]
[-] EMBL CB671698             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AAGAGGGTCAGTTTACTGCAACCACTGATGTTGAAGATGAGAGGGAGGAGGGAGAGTTGCCAGATGAACCAGAACAACCAGACAGCACTCCCCCTGTGCTGGATGTTGGTGAGCAAGCCGGTGATTCTTTCAGGGCGGCATCTCCAGCAGGACCAACTGAAAAGAGTGATGTTGACATGCCAGAAGAAACTGGAGAAGGTGATGGTACCATGGAATCAGACCAAAGCCCTGTACCACAATCTGGTGGAGCAGATGCGTCACCGAGCCAAATGGCTGATGCGTCACCAAGCCCTGCACGTGAACCTTCTCCTAACCCAGTCCAAGCTGGTGCACCTCCTGAACAGCAGAATCCCACCCCTCCTAACCCAGTCCAAGCTGGTGCATCTTCTGAACAGCAGAATCCCGCCACTGCAGCAGAAGGTGTTGAAACTCGTAGTACCAGAACAATCAACCTAACTGAGAGAGCGAGGCAAAACCGGCAAGCCAGGATTCTTCGCTCAGCCACTCAACAGAATGCAAGGGGCCGTGGCAACCAGTCTCTTACATACAGGAAAGATGGCGGCCGAGGAACACGGGGTCGTGGTGGGCGTGGTCAGTCGTAGAGAATTTAGGTTTGTCTTTGCTCAAGCGCGGAGACTAGTTTTTTGCAAAGGACATACTGAATCAGGGCGGCATCATATTCATTTTGTAGCACTATCAGAATTGCGAGCGTACATGTTACTCTGCTTAGACAAATTCATGTGGCTAAGCAGCGCTTATTAAAATGTTCTCATTGCCCGTGCGGATTGCC                                       ]
[-] EMBL CB656383             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGTTTACTGCAACCACTGATGTTGAAGATGAGAGGGAGGAGAAAGAGTTGCCAGATGAACCAGAACAACCAGACAGCACTCCCCCTGTGCTGGATGTTGGTGAGCAAGCCGGTGATTCTTTCAGGGCGGCATCTCCAGCAGGACCAACTGAAAAGAGTGATGTTGACATGCCAGAAGAAACTGGAGAAGGTGATGGTACCATGGAATCAGACCAAAGCCCTGTACCACAATCTGGTGGAGCAGATGCGTCACCGAGCCAAATGGCTGATGCGTCACCAAGCCCTGCACGTGAACCTTCTCCTAACCCAGTCCAAGCTGGTGCACCTCCTGAACAGCAGAATCCCACCCCTCCTAACCCAGTCCAAGCTGGTGCATCTTCTGAACAGCAGAATCCCGCCACTGCAGCAGAAGGTGTTGAAACTCGTAGTACCAGAACAATCAACCTAACTGAGAGAGCGAGGCAAAACCGGCAAGCCAGGATTCTTCGCTCAGCCACTCAACAGAATGCAAGGGGCCGTGGCAACCAGTCTCTTACATACAGGAAAGATGGCGGCCGAGGAACACGGGGTCGTGGTGGGCGTGGTCAGTCGTAGAGAATTTAGGTTTGTCTTTGCTCAAGCGCGGAGACTAGTTTTTTGCAAAGGACATACTGAATCAGGGCGGCATCATATTCATTTTGTAGCACTATCAGAATTGCGAGCGTACATGTTACTCTGCTTAGACAAATTCATGTGGCTAAGCAGCGCTTATTAAAATGTTCTCATTGCCCGTGCGGATTGCCAGATGACCTATATTTAAATTGAACTCTAGTTGACAAAGA]
[+] EMBL CA756603             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACCACTGATGTTGAAGATGAGAGGGAGGAGGGAGAGTTGCCAGATGAACCAGAACAACCAGACAGCACTCCCCCTGTGCTGGATGTTGGTGAGCAAGCCGGTGATTCTTTCAGGGCGGCATCTCCAGCAGGACCAACTGAAAAGAGTGATGTTGACATGCCAGAAGAAACTGGAGAAGGTGATGGTACCATGGAATCAGACCAAAGCCCTGTACCACAATCTGGTGGAGCAGATGCGTCACCGAGCCAAATGGCTGATGCGTCACCAAGCCCTGCACGTGAACCTTCTCCTAACCCAGTCCAAGCTGGTGCACCTCCTGAACAGCAGAATCCCACCCCTCCTAACCCAGTCCAAGCTGGTGCATCTTCTGAACAGCAGAATCCCGCCACTGCAGCAGAAGGTGTTGAAACTCGTAGTACCAGAACAATCAACCTAACTGAGAGAGCGAGGCAAAACCGGCAAGCCAGGATTCTTCGCTCAGCCACTCAACAGAATGCAAGGGGCCGTGGCAACCAGTCTCTTACATACAGGANAGATGGCGGCCGAGGAACACGGNGTCGTGGTGGGCGTGGTCAGTCGTAGAGAATTTAGGTTTGTCTTTGCTCAAGCGCGG                                                                                                                                                                                                    ]
[-] EMBL CB631692             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GATGAGAGGGAGGAGGGAGAGTTGCCAGATGAACCAGAACAACCAGACAGCACTCCCCCTGTGCTGGATGTTGGTGAGCAAGCCGGTGATTCTTTCAGGGCGGCATCTCCAGCAGGACCAACTGAAAAGAGTGATGTTGACATGCCAGAAGAAACTGGAGAAGGTGATGGTACCATGGAATCAGACCAAAGCCCTGTACCACAATCTGGTGGAGCAGATGCGTCACCGAGCCAAATGGCTGATGCGTCACCAAGCCCTGCACGTGAACCTTCTCCTAACCCAGTCCAAGCTGGTGCACCTCCTGAACAGCAGAATCCCACCCCTCCTAACCCAGTCCAAGCTGGTGCATCTTCTGAACAGCAGAATCCCGCCACTGCAGCAGAAGGTGTTGAAACTCGTAGTACCAGAACAATCAACCTAACTGAGAGAGCGAGGCAAAACCGGCAAGCCAGGATTCTTCGCTCAGCCACTCAACAGAATGCAAGGGGCCGTGGCAACCAGTCTCTTACATACAGGAAAGATGGCGGCCGAGGAACACGGGGTCGTGGTGGGCGTGGTCAGTCGTAGAGAATTTAGGTTTGTCTTTGCTCAAGCGCGGAGACTAGTTTTTTGC AAGGACATACTGAATCAGGACGGCATCATATTCATTTTGTAGCACTATCAGAATTGCGAGCGTACATGTTACTCTGCTTAGACAAATTCATGTGGCTAAGCAGCGCGTATTAAAATGTTCTCATTGCCCGTGCGGATTG                                         ]




>consensus_8840#0
GGAAACAAGTAGAGGAATCAATTGAGAAGCATAGGCAGGCTGTGAAAGAGGTGATTGAGC
ATTATACTGGAATATCCTCTCAAATCCCATCTGGATCTGCAATCGATGAGCAGCTGCGTT
CATATTTCCTTGCCATCAAAGCTGTTGAGGAGTCTCCGAGTCCCTTCCAAGATGGTGCAG
CAAGCCAGACACCATCTGTTGAAAGTGCCGATGTGGATGCATCTGCAGCTACTGCAGGGA
GACAGGTAGCTACTCCACCAAGGCCTGCTCAAGTTAAAGTGGTGGAGGAGAGAGCAGTTT
CTACTTTGCCCAAACCAAGCACTGAAGTACGTAGACCAGGAGGAAGGAGACCACTTGTTC
GACCTTCACTTGAACGAGTTGAAGAACCCCAAGCTGATATTGATACAACAGTAGTTGAAG
GTTCCACAGAGAAAGGCGGCTTGTTGATGGAGCGTGAAACTCCTGGTGGTGTATCTGCGT
TACAGCCATCAAGTCGTAAACGTCTAATTCCATCACCACAAACGAGAGATGATGCTTCAC
AAGGAGAGACAACGGATGCCAATCCACCACTGAAGAAACCCAAAGAAGGATCTTCACAAT
GTACTAGTGAGCTAAAAACTGAACAGTCACCTCATGAAGATGTCATGGCACCTGTTCCTG
TGCTACCATCTACAGAGTTAGATGAGCAACAGCCTGGAGAAGAGATGGACACCGATCAGT
CTTCCTTGCCAGTTGAAGAGGTTGAGGAAACAAGGGAGGATGACTTGGGTGATAAGGATG
ACATGGAAACACATATAGACGCTTCAATGGACATCCAAGGACAAGATGCAGAAACTGGTA
TTGATAATGATGCAACTACTGTGGAAGATGTGCCAGTCAAGTCAGAAGCGGTTATGGAAT
CACTGGAGGAAGACCTGAAAACTGAGGATGGGAAGGAAGAGGGTCAGTTTACTGCAACCA
CTGATGTTGAAGATGAGAGGGAGGAGGGAGAGTTGCCAGATGAACCAGAACAACCAGACA
GCACTCCCCCTGTGCTGGATGTTGGTGAGCAAGCCGGTGATTCTTTCAGGGCGGCATCTC
CAGCAGGACCAACTGAAAAGAGTGATGTTGACATGCCAGAAGAAACTGGAGAAGGTGATG
GTACCATGGAATCAGACCAAAGCCCTGTACCACAATCTGGTGGAGCAGATGCGTCACCGA
GCCAAATGGCTGATGCGTCACCAAGCCCTGCACGTGAACCTTCTCCTAACCCAGTCCAAG
CTGGTGCACCTCCTGAACAGCAGAATCCCACCCCTCCTAACCCAGTCCAAGCTGGTGCAT
CTTCTGAACAGCAGAATCCCGCCACTGCAGCAGAAGGTGTTGAAACTCGTAGTACCAGAA
CAATCAACCTAACTGAGAGAGCGAGGCAAAACCGGCAAGCCAGGATTCTTCGCTCAGCCA
CTCAACAGAATGCAAGGGGCCGTGGCAACCAGTCTCTTACATACAGGAAAGATGGCGGCC
GAGGAACACGGGGTCGTGGTGGGCGTGGTCAGTCGTAGAGAATTTAGGTTTGTCTTTGCT
CAAGCGCGGAGACTAGTTTTTTGCAAAGGACATACTGAATCAGGGCGGCATCATATTCAT
TTTGTAGCACTATCAGAATTGCGAGCGTACATGTTACTCTGCTTAGACAAATTCATGTGG
CTAAGCAGCGCTTATTAAAATGTTCTCATTGCCCGTGCGGATTGCCAGATGACCTATATT
TAAATTGAACTCTAGTTGACAAAGA
clustalw multiple alignements is not computed in this case