cluster # 8849

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Oryza sativa
cluster # 8849 cluster # 8849 Sequences # 6 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8849#0 length = 3205 sequences # 2

consensus_8849#1 length = 2249 sequences # 1
consensus_8849#2 length = 1160 sequences # 3

consensusID : consensus_8849#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 3205
fasta sequence

                              [ACTCTGAGTACGAGCACGAGCACCCCCACAAGCTTTGTAGCTCTGCTCTGCTCAGTAGGCAAACAGATCTCAGCAAGATGGCCGAGGTGCTGGCGAGTGGTGCTACCGGGTTGATCACATCACTCCTGGGCAAGCTCGCCAGCCTGCTCGATGACGAGTACACCCTGCTCCGCGAGGTGCGCGGCGACGTGGAGTTCCTCCAGGCCGAGCTGAGCGGCATGGACGACTTGCTGGTACGGCTTGTGGAGATGGAGAAGAATGGACACGGCACCAAGAAGTGGAGGGTGAAGCTGCGCGAGCTCGCCTACGAAGTCGAGGACGGCATCGATTCCTTCACACACCGCCTTGGCTCTGCCCGTGACAGGGCAGGGTTCGTGCGGGGTTTCATGAAGCAGCTGAATCTGATGGTGCGCCACCAGGTCGCCAGGCAGATCCAAGAACTCAGGGACCAAATCGAAGTCGAGTGCGCACGGCAGATGAGGTACACCCAGCTTGGTGGTGGTGGCTCATCATCCATTGACGCCGCCGTAGCTGACCAAATCGACTGCCGCGTGAAGGCGCTGTATGTGGATCCGGACCATCAGCTTGTGGGGATGGATGGTCCGGTGGCGAGCATCGTCGAGCTGCTGACCATGGAAGAAGACGAGTCGTCGGCAAGGCAGCTCCGGATCGTGTCCATCTTTGGCCCTGGAGGTCTAGGCAAGACTACTCTTGCCAATCAGGTGCACCGCAAAATCAAAGGCCAATTTGACTATGCTGCTCTGGTGTCTGTGTCTCAAAGGCCAATCAGGGACATTTTGACCAAGATTGCTCCTTCAGTCATCCCAACTGACAGCAGCAGCAGTTTAGATACATGCCAACTCATCGAAATCGTCAAAGATTTTCTTCAAGACAAGAGGTACCTCATTGTTTTTGATGATATCTGGAGTACAAAAATGTGGGAGAATCTGATGTCAGTTCTACCTAGAAACAACAAGAAAAGCAGAGTAATTACTACAACTCGCATGTCCAATGTTGCGAGCTCACGTTCTCCCCGGTCCAATGGTCATATCTATGAAATGGAATCTTTAAATGATGCTGACTCCAAAGAGTTATTTTCTAAAATCATTTTTGACCACAAGGGTAAATGTCCAAAGGCATTGGACGAAATAGCCGATGAAATTTTGAAAAAGTGTGGTGGCATACCGTTGGCCATAATTACGTTAGCTAGTTTGCTTGCTAAAAAACCAAAAACAAGGAAAGAGTGGAAGAGAGTGAAAAGTTCTATTGGCAATGCATGTGAACTAGAAGGGATGAGACAGACATTATCCCTTAGCTTTTATGACCTGTCTTATGATCTTAGAAACTGTTTCCTATCATTTAGCTCCTTCCCAGAGGATTATGAAATTGATAGAGAGAGATTGGTACTGAGATGGATTGCTGAAGGATTCATTTCGGGGAAAGAACAACAGGAATTAATGGAGGAAGAAGGAAACAACTACTTTAATGAGCTAGTTAATAGGAGTCTGATTCAGCCAATTGATATTCAATATAATGGTTCTGCACGAGCTTGTCGAGTCCATGATCTGATGCTTGAGCTTATAGTGTCCCTGTCAAAAGAAGAGAATTTTATCACTACATTGAATGGACCGGAGTGTCTACCTATGCCGAGCAAAATTCGATGGTTATCTCTCCATTCCAACGGAAATGAAGTAATGCAGGTGGTCACAAATAATCGTCGCCATGTTCGGTCTGTGAGTTTCTTCCCGCCTGTTGCACAGTTGCCTCCTTTTGTTGAATTCCAAGCTATGCGGGTTTTTGATGTAAAAGGCTGTCAGTTTGGGGAGCACAAAAAAATGAAAAACATGGAAAGTTTAATTCAGTTGAAGTATCTGAATTTGGCATATACCAATGTGACAGAACTTCCAAAAGAAATTGGGGAGGTTCATTTCTTAGAGACTCTTGATGTTAGAAATTGTCAAATACAAAGTTTACCACCATCATTATGCCAATTGCAGAAGTTGGTGCGACTTTTTGTCAGCCTTGGAGTCACATTGCCAGATAAGATTGGGAAGATGCAAGCATTGGAGGAGCTATCACATGTTGCCATCTTATGCAACTCTTTGAATTTTGTGAAGGCACTAGGGGAGCTGACCAAACTGAGAGTGTTCCGAGTAGATTGCCGGTATTCATGGCTTAACGGGAAGAAACAAGCCCCAAGGCAATCAGTCAGCACGCATGAAGATGTTTTGTTGTCATCTCTGCAAAATTTGTTAAAAAAGAAGAATCTTCGATCACTAGAGATCGACCTTACAAATGGTTCTTCCTTGGTGTTTTCATTGATGAATCCATACTGTCCTCTTCCCCAACTCGAAGAACTTGTCATTTCCAATTCCATTTCCAGAGTTCCAAGGAGCATGAGATCGCTGAAGGACGTTATCCATTTGGAAATCAAGCTTGATAGGATGGAAGAAGAAGATCTCCATATCATCAGAGACATGTCTCATTCACTGCTTTTTCTAAAAATCCACTTGGAAATAACCCCAGAAGAGAGGCTTATCATTGACTCCGAGGGATTTGAGTGTCTGAAGCAATTTGAGTTTTGCTGTGTTGGAATGGGGCTGAAATTTGTGCAAGGGGCTATGCCAGATCTCGAGAAGCTTGATCTTGATATTGGGGTTCGAAAGACCATGTCCAAGTATGGCGGTTTCGACTTTGGCATCAAGAATCTTGAAGCACTCAAACATGTTGGTGTCAAACTTGATTGTCAATATGCTGAAAATCGGGAGATCCAGTCTGCAGAGGCTACTATCAGGAGTGGAGTCCTTCCAAGACGTATAATGCCACAAATTCAAAGGATTGGTGTGAACAGATGAACTTTCTTCCAGAAATAGTTGAATGCTACTGCTTTGGTATTTGCAGGGAACTCATTGGATTCGATTCTAGGCCCTATTGTGAAAGTGTGATGAGAGACAAATAACAGATGCAACACACATCGTTATTTATGGATGATGGTTATGCAACTCTTTGTTAATCATCATATATGAAAATTTAGCTGCTTTTAATAATGTCATGTCATCTAAAGTATGCTGGTGATCTTTAGTTCTTTTGTGATGTAGACGGATGTTATGTAAACAACGTAATAATTTGGCTCTACCTTCTCATGAAGCAGAGGCCGTGCTTTTTTTCACTATTAAAAAAAATTCTCAAAAAAAAAAAAAAAAAA]

[+] EMBL AK069497             [ACTCTGAGTACGAGCACGAGCACCCCCACAAGCTTTGTAGCTCTGCTCTGCTCAGTAGGCAAACAGATCTCAGCAAGATGGCCGAGGTGCTGGCGAGTGGTGCTACCGGGTTGATCACATCACTCCTGGGCAAGCTCGCCAGCCTGCTCGATGACGAGTACACCCTGCTCCGCGAGGTGCGCGGCGACGTGGAGTTCCTCCAGGCCGAGCTGAGCGGCATGGACGACTTGCTGGTACGGCTTGTGGAGATGGAGAAGAATGGACACGGCACCAAGAAGTGGAGGGTGAAGCTGCGCGAGCTCGCCTACGAAGTCGAGGACGGCATCGATTCCTTCACACACCGCCTTGGCTCTGCCCGTGACAGGGCAGGGTTCGTGCGGGGTTTCATGAAGCAGCTGAATCTGATGGTGCGCCACCAGGTCGCCAGGCAGATCCAAGAACTCAGGGACCAAATCGAAGTCGAGTGCGCACGGCAGATGAGGTACACCCAGCTTGGTGGTGGTGGCTCATCATCCATTGACGCCGCCGTAGCTGACCAAATCGACTGCCGCGTGAAGGCGCTGTATGTGGATCCGGACCATCAGCTTGTGGGGATGGATGGTCCGGTGGCGAGCATCGTCGAGCTGCTGACCATGGAAGAAGACGAGTCGTCGGCAAGGCAGCTCCGGATCGTGTCCATCTTTGGCCCTGGAGGTCTAGGCAAGACTACTCTTGCCAATCAGGTGCACCGCAAAATCAAAGGCCAATTTGACTATGCTGCTCTGGTGTCTGTGTCTCAAAGGCCAATCAGGGACATTTTGACCAAGATTGCTCCTTCAGTCATCCCAACTGACAGCAGCAGCAGTTTAGATACATGCCAACTCATCGAAATCGTCAAAGATTTTCTTCAAGACAAGAGGTACCTCATTGTTTTTGATGATATCTGGAGTACAAAAATGTGGGAGAATCTGATGTCAGTTCTACCTAGAAACAACAAGAAAAGCAGAGTAATTACTACAACTCGCATGTCCAATGTTGCGAGCTCACGTTCTCCCCGGTCCAATGGTCATATCTATGAAATGGAATCTTTAAATGATGCTGACTCCAAAGAGTTATTTTCTAAAATCATTTTTGACCACAAGGGTAAATGTCCAAAGGCATTGGACGAAATAGCCGATGAAATTTTGAAAAAGTGTGGTGGCATACCGTTGGCCATAATTACGTTAGCTAGTTTGCTTGCTAAAAAACCAAAAACAAGGAAAGAGTGGAAGAGAGTGAAAAGTTCTATTGGCAATGCATGTGAACTAGAAGGGATGAGACAGACATTATCCCTTAGCTTTTATGACCTGTCTTATGATCTTAGAAACTGTTTCCTATCATTTAGCTCCTTCCCAGAGGATTATGAAATTGATAGAGAGAGATTGGTACTGAGATGGATTGCTGAAGGATTCATTTCGGGGAAAGAACAACAGGAATTAATGGAGGAAGAAGGAAACAACTACTTTAATGAGCTAGTTAATAGGAGTCTGATTCAGCCAATTGATATTCAATATAATGGTTCTGCACGAGCTTGTCGAGTCCATGATCTGATGCTTGAGCTTATAGTGTCCCTGTCAAAAGAAGAGAATTTTATCACTACATTGAATGGACCGGAGTGTCTACCTATGCCGAGCAAAATTCGATGGTTATCTCTCCATTCCAACGGAAATGAAGTAATGCAGGTGGTCACAAATAATCGTCGCCATGTTCGGTCTGTGAGTTTCTTCCCGCCTGTTGCACAGTTGCCTCCTTTTGTTGAATTCCAAGCTATGCGGGTTTTTGATGTAAAAGGCTGTCAGTTTGGGGAGCACAAAAAAATGAAAAACATGGAAAGTTTAATTCAGTTGAAGTATCTGAATTTGGCATATACCAATGTGACAGAACTTCCAAAAGAAATTGGGGAGGTTCATTTCTTAGAGACTCTTGATGTTAGAAATTGTCAAATACAAAGTTTACCACCATCATTATGCCAATTGCAGAAGTTGGTGCGACTTTTTGTCAGCCTTGGAGTCACATTGCCAGATAAGATTGGGAAGATGCAAGCATTGGAGGAGCTATCACATGTTGCCATCTTATGCAACTCTTTGAATTTTGTGAAGGCACTAGGGGAGCTGACCAAACTGAGAGTGTTCCGAGTAGATTGCCGGTATTCATGGCTTAACGGGAAGAAACAAGCCCCAAGGCAATCAGTCAGCACGCATGAAGATGTTTTGTTGTCATCTCTGCAAAATTTGTTAAAAAAGAAGAATCTTCGATCACTAGAGATCGACCTTACAAATGGTTCTTCCTTGGTGTTTTCATTGATGAATCCATACTGTCCTCTTCCCCAACTCGAAGAACTTGTCATTTCCAATTCCATTTCCAGAGTTCCAAGGAGCATGAGATCGCTGAAGGACGTTATCCATTTGGAAATCAAGCTTGATAGGATGGAAGAAGAAGATCTCCATATCATCAGAGACATGTCTCATTCACTGCTTTTTCTAAAAATCCACTTGGAAATAACCCCAGAAGAGAGGCTTATCATTGACTCCGAGGGATTTGAGTGTCTGAAGCAATTTGAGTTTTGCTGTGTTGGAATGGGGCTGAAATTTGTGCAAGGGGCTATGCCAGATCTCGAGAAGCTTGATCTTGATATTGGGGTTCGAAAGACCATGTCCAAGTATGGCGGTTTCGACTTTGGCATCAAGAATCTTGAAGCACTCAAACATGTTGGTGTCAAACTTGATTGTCAATATGCTGAAAATCGGGAGATCCAGTCTGCAGAGGCTACTATCAGGAGTGGAGTCCTTCCAAGACGTATAATGCCACAAATTCAAAGGATTGGTGTGAACAGATGAACTTTCTTCCAGAAATAGTTGAATGCTACTGCTTTGGTATTTGCAGGGAACTCATTGGATTCGATTCTAGGCCCTATTGTGAAAGTGTGATGAGAGACAAATAACAGATGCAACACACATCGTTATTTATGGATGATGGTTATGCAACTCTTTGTTAATCATCATATATGAAAATTTAGCTGCTTTTAATAATGTCATGTCATCTAAAGTATGCTGGTGATCTTTAGTTCTTTTGTGATGTAGACGGATGTTATGTAAACAACGTAATAATTTGGCTCTACCTTCTCATGAAGCAGAGGCCGTGCTTTTTTTCACTATTAAA                            ]
[-] EMBL CA759345             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATTGACTCCGAGGGATTTGAGTGTCTGAAGCAATCTGAGTTCTGCTGTGTTGGAATGGGGCTGAAATTTGTGCAAGGGGCTATGCCAGATCTCGAGAAGCTTGATCTTGATATTGGGGTTCGAAAGACCATGTCCAAGTATGGCGGTTTCGACTTTGGCATCAAGAATCTTGAAGCACTCAAACATGTTGGTGTCAAACTTGATTGTCAATATGCTGAAAATCGGGAGATCCAGTCTGCAGAGGCTACTATCAGGAGTGGAGTCCTTCCAAGACGTATAATGCCACAAATTCAAAGGATTGGTGTGAACAGATGAACTTTCTTCCAGAAATAGTTGAATGCTACTGCTTTGGTATTTGCAGGGAACTCATTGGATTCGATTCTAGGCCCTATTGTGAAAGTGTGATGAGAGACAAATAACAGATGCAACACACATCGTTATTTATGGATGATGGTTATGCAACTCTTTGTTAATCATCATATATGAAAATTTAGCTGCTTTTAATAATGTCATGTCATCTAAAGTATGCTGGTGATCTTTAGTTCTTTTGTGATGTAGACGGATGTTATGTAAACAACGTAATAATTTGGCTCTACCTTCTCATGAAGCAGAGGCCGTGCTTTTTTTCACTATTAAAAAAAATTCTCAAAAAAAAAAAAAAAAAA]




>consensus_8849#0
ACTCTGAGTACGAGCACGAGCACCCCCACAAGCTTTGTAGCTCTGCTCTGCTCAGTAGGC
AAACAGATCTCAGCAAGATGGCCGAGGTGCTGGCGAGTGGTGCTACCGGGTTGATCACAT
CACTCCTGGGCAAGCTCGCCAGCCTGCTCGATGACGAGTACACCCTGCTCCGCGAGGTGC
GCGGCGACGTGGAGTTCCTCCAGGCCGAGCTGAGCGGCATGGACGACTTGCTGGTACGGC
TTGTGGAGATGGAGAAGAATGGACACGGCACCAAGAAGTGGAGGGTGAAGCTGCGCGAGC
TCGCCTACGAAGTCGAGGACGGCATCGATTCCTTCACACACCGCCTTGGCTCTGCCCGTG
ACAGGGCAGGGTTCGTGCGGGGTTTCATGAAGCAGCTGAATCTGATGGTGCGCCACCAGG
TCGCCAGGCAGATCCAAGAACTCAGGGACCAAATCGAAGTCGAGTGCGCACGGCAGATGA
GGTACACCCAGCTTGGTGGTGGTGGCTCATCATCCATTGACGCCGCCGTAGCTGACCAAA
TCGACTGCCGCGTGAAGGCGCTGTATGTGGATCCGGACCATCAGCTTGTGGGGATGGATG
GTCCGGTGGCGAGCATCGTCGAGCTGCTGACCATGGAAGAAGACGAGTCGTCGGCAAGGC
AGCTCCGGATCGTGTCCATCTTTGGCCCTGGAGGTCTAGGCAAGACTACTCTTGCCAATC
AGGTGCACCGCAAAATCAAAGGCCAATTTGACTATGCTGCTCTGGTGTCTGTGTCTCAAA
GGCCAATCAGGGACATTTTGACCAAGATTGCTCCTTCAGTCATCCCAACTGACAGCAGCA
GCAGTTTAGATACATGCCAACTCATCGAAATCGTCAAAGATTTTCTTCAAGACAAGAGGT
ACCTCATTGTTTTTGATGATATCTGGAGTACAAAAATGTGGGAGAATCTGATGTCAGTTC
TACCTAGAAACAACAAGAAAAGCAGAGTAATTACTACAACTCGCATGTCCAATGTTGCGA
GCTCACGTTCTCCCCGGTCCAATGGTCATATCTATGAAATGGAATCTTTAAATGATGCTG
ACTCCAAAGAGTTATTTTCTAAAATCATTTTTGACCACAAGGGTAAATGTCCAAAGGCAT
TGGACGAAATAGCCGATGAAATTTTGAAAAAGTGTGGTGGCATACCGTTGGCCATAATTA
CGTTAGCTAGTTTGCTTGCTAAAAAACCAAAAACAAGGAAAGAGTGGAAGAGAGTGAAAA
GTTCTATTGGCAATGCATGTGAACTAGAAGGGATGAGACAGACATTATCCCTTAGCTTTT
ATGACCTGTCTTATGATCTTAGAAACTGTTTCCTATCATTTAGCTCCTTCCCAGAGGATT
ATGAAATTGATAGAGAGAGATTGGTACTGAGATGGATTGCTGAAGGATTCATTTCGGGGA
AAGAACAACAGGAATTAATGGAGGAAGAAGGAAACAACTACTTTAATGAGCTAGTTAATA
GGAGTCTGATTCAGCCAATTGATATTCAATATAATGGTTCTGCACGAGCTTGTCGAGTCC
ATGATCTGATGCTTGAGCTTATAGTGTCCCTGTCAAAAGAAGAGAATTTTATCACTACAT
TGAATGGACCGGAGTGTCTACCTATGCCGAGCAAAATTCGATGGTTATCTCTCCATTCCA
ACGGAAATGAAGTAATGCAGGTGGTCACAAATAATCGTCGCCATGTTCGGTCTGTGAGTT
TCTTCCCGCCTGTTGCACAGTTGCCTCCTTTTGTTGAATTCCAAGCTATGCGGGTTTTTG
ATGTAAAAGGCTGTCAGTTTGGGGAGCACAAAAAAATGAAAAACATGGAAAGTTTAATTC
AGTTGAAGTATCTGAATTTGGCATATACCAATGTGACAGAACTTCCAAAAGAAATTGGGG
AGGTTCATTTCTTAGAGACTCTTGATGTTAGAAATTGTCAAATACAAAGTTTACCACCAT
CATTATGCCAATTGCAGAAGTTGGTGCGACTTTTTGTCAGCCTTGGAGTCACATTGCCAG
ATAAGATTGGGAAGATGCAAGCATTGGAGGAGCTATCACATGTTGCCATCTTATGCAACT
CTTTGAATTTTGTGAAGGCACTAGGGGAGCTGACCAAACTGAGAGTGTTCCGAGTAGATT
GCCGGTATTCATGGCTTAACGGGAAGAAACAAGCCCCAAGGCAATCAGTCAGCACGCATG
AAGATGTTTTGTTGTCATCTCTGCAAAATTTGTTAAAAAAGAAGAATCTTCGATCACTAG
AGATCGACCTTACAAATGGTTCTTCCTTGGTGTTTTCATTGATGAATCCATACTGTCCTC
TTCCCCAACTCGAAGAACTTGTCATTTCCAATTCCATTTCCAGAGTTCCAAGGAGCATGA
GATCGCTGAAGGACGTTATCCATTTGGAAATCAAGCTTGATAGGATGGAAGAAGAAGATC
TCCATATCATCAGAGACATGTCTCATTCACTGCTTTTTCTAAAAATCCACTTGGAAATAA
CCCCAGAAGAGAGGCTTATCATTGACTCCGAGGGATTTGAGTGTCTGAAGCAATTTGAGT
TTTGCTGTGTTGGAATGGGGCTGAAATTTGTGCAAGGGGCTATGCCAGATCTCGAGAAGC
TTGATCTTGATATTGGGGTTCGAAAGACCATGTCCAAGTATGGCGGTTTCGACTTTGGCA
TCAAGAATCTTGAAGCACTCAAACATGTTGGTGTCAAACTTGATTGTCAATATGCTGAAA
ATCGGGAGATCCAGTCTGCAGAGGCTACTATCAGGAGTGGAGTCCTTCCAAGACGTATAA
TGCCACAAATTCAAAGGATTGGTGTGAACAGATGAACTTTCTTCCAGAAATAGTTGAATG
CTACTGCTTTGGTATTTGCAGGGAACTCATTGGATTCGATTCTAGGCCCTATTGTGAAAG
TGTGATGAGAGACAAATAACAGATGCAACACACATCGTTATTTATGGATGATGGTTATGC
AACTCTTTGTTAATCATCATATATGAAAATTTAGCTGCTTTTAATAATGTCATGTCATCT
AAAGTATGCTGGTGATCTTTAGTTCTTTTGTGATGTAGACGGATGTTATGTAAACAACGT
AATAATTTGGCTCTACCTTCTCATGAAGCAGAGGCCGTGCTTTTTTTCACTATTAAAAAA
AATTCTCAAAAAAAAAAAAAAAAAA

consensusID : consensus_8849#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 2249
fasta sequence

                              [TCAGTGGCCACCTAACCCAACTACCTTGAAGGACACACACTCCACAGTGGAGGAGGCCAAGGATTTGCTAGGCTAGGACCACACTTGCCGTTCCTAGGTACCTCATTGTTTTTGATGATATCTGGAGTACAAAAATGTGGGAGAATCTGATGTCAGTTCTACCTAGAAACAACAAGAAAAGCAGAGTAATTACTACAACTCGCATGTCCAATGTTGCGAGCTCACGTTCTCCCCGGTCCAATGGTCATATCTATGAAATGGAATCTTTAAATGATGCTGACTCCAAAGAGTTATTTTCTAAAATCATTTTTGACCACAAGGGTAAATGTCCAAAGGCATTGGACGAAATAGCCGATGAAATTTTGAAAAAGTGTGGTGGCATACCGTTGGCCATAATTACGTTAGCTAGTTTGCTTGCTAAAAAACCAAAAACAAGGAAAGAGTGGAAGAGAGTGAAAAGTTCTATTGGCAATGCATGTGAACTAGAAGGGATGAGACAGACATTATCCCTTAGCTTTTATGACCTGTCTTATGATCTTAGAAACTGTTTCCTATCATTTAGCTCCTTCCCAGAGGATTATGAAATTGATAGAGAGAGATTGGTACTGAGATGGATTGCTGAAGGATTCATTTCGGGGAAAGAACAACAGGAATTAATGGAGGAAGAAGGAAACAACTACTTTAATGAGCTAGTTAATAGGAGTCTGATTCAGCCAATTGATATTCAATATAATGGTTCTGCACGAGCTTGTCGAGTCCATGATCTGATGCTTGAGCTTATAGTGTCCCTGTCAAAAGAAGAGAATTTTATCACTACATTGAATGGACCGGAGTGTCTACCTATGCCGAGCAAAATTCGATGGTTATCTCTCCATTCCAACGAAAATGAAGTAATGCAGGTGGTCACAAATAATCGTCGCCATGTTCGGTCTGTGAGTTTCTTCCCGCCTGTTGCACAGTTGCCTCCTTTTGTTGAATTCCAAGCTATGCGGGTTTTTGATGTAAAAGGCTGTCAGTTTGGGGAGCACAAAAAAATGAAAAACATGGAAAGTTTAATTCAGTTGAAGTATCTGAATTTGGCATATACCAATGTGACAGAACTTCCAAAAGAAATTGGGGAGGTTCATTTCTTAGAGACTCTTGATGTTAGAAATTGTCAAATACAAAGTTTACCACCATCATTATGCCAACTGCAGAAGTTGGTGCGACTTTTTGTCAGCCTTGGAGTCACATTGCCAGATAAGATTGGGAAGATGCAAGCATTGGAGGAGCTATCACATGTTGCCATCTTATGCAACTCTTTGAATTTTGTGAAGGCACTAGGGGAGCTGACCAAACTGAGAGTGTTCCGAGTAGATTGCCGGTATTCATGGCTTAACGGGAAGAAACAAGCCCCAAGGCAATCAGTCAGCACGCATGAAGATGTTTTGTTGTCATCTCTGCAAAATTTGTTAAAAAAGAAGAATCTTCGATCACTAGAGATCGACCTTACAAATGGTTCTTCCTTGGTGTTTTCATTGATGAATCCATACTGTCCTCTTCCCCAACTCGAAGAACTTGTCATTTCCAATTCCATTTCCAGAGTTCCAAGGAGCATGAGATCGCTGAAGGACGTTATCCATTTGGAAATCAAGCTTGATAGGATGGAAGAAGAAGATCTCCATATCATCAGAGACATGTCTCATTCACTGCTTTTTCTAAAAATCCACTTGGAAATAACCCCAGAAGAGAGGCTTATCATTGACTCCGAGGGATTTGAGTGTCTGAAGCAATTTGAGTTTTGCTGTGTTGGAATGGGGCTGAAATTTGTGCAAGGGGCTATGCCAGATCTCGAGAAGCTTGATCTTGATATTGGGGTTCGAAAGACCATGTCCAAGTATGGCGGTTTCGACTTTGGCATCAAGAATCTTGAAGCACTCAAACATGTTGGTGTCAAACTTGATTGTCAATATGCTGAAAATCGGGAGATCCAGTCTGCAGAGGCTACTATCAGGAGTGGAGTCCTTCCAAGACGTATAATGCCACAAATTCAAAGGATTGGTGTGAACAGATGAACTTTCTTCCAGAAATAGTTGAATGCTACTGCTTTGGTATTTGCAGGGAACTCATTGGATTCGATTCTAGGCCCTATTGTGAAAGTGTGATGAGAGACAAATAACAGATGCAACACACATCGTTATTTATGGATGATGGTTATGCAACTCTTTGTTAATCATCATATATGAAAATTTAGCTGCTTTTAATAATGT]

[+] EMBL AK069246             [TCAGTGGCCACCTAACCCAACTACCTTGAAGGACACACACTCCACAGTGGAGGAGGCCAAGGATTTGCTAGGCTAGGACCACACTTGCCGTTCCTAGGTACCTCATTGTTTTTGATGATATCTGGAGTACAAAAATGTGGGAGAATCTGATGTCAGTTCTACCTAGAAACAACAAGAAAAGCAGAGTAATTACTACAACTCGCATGTCCAATGTTGCGAGCTCACGTTCTCCCCGGTCCAATGGTCATATCTATGAAATGGAATCTTTAAATGATGCTGACTCCAAAGAGTTATTTTCTAAAATCATTTTTGACCACAAGGGTAAATGTCCAAAGGCATTGGACGAAATAGCCGATGAAATTTTGAAAAAGTGTGGTGGCATACCGTTGGCCATAATTACGTTAGCTAGTTTGCTTGCTAAAAAACCAAAAACAAGGAAAGAGTGGAAGAGAGTGAAAAGTTCTATTGGCAATGCATGTGAACTAGAAGGGATGAGACAGACATTATCCCTTAGCTTTTATGACCTGTCTTATGATCTTAGAAACTGTTTCCTATCATTTAGCTCCTTCCCAGAGGATTATGAAATTGATAGAGAGAGATTGGTACTGAGATGGATTGCTGAAGGATTCATTTCGGGGAAAGAACAACAGGAATTAATGGAGGAAGAAGGAAACAACTACTTTAATGAGCTAGTTAATAGGAGTCTGATTCAGCCAATTGATATTCAATATAATGGTTCTGCACGAGCTTGTCGAGTCCATGATCTGATGCTTGAGCTTATAGTGTCCCTGTCAAAAGAAGAGAATTTTATCACTACATTGAATGGACCGGAGTGTCTACCTATGCCGAGCAAAATTCGATGGTTATCTCTCCATTCCAACGAAAATGAAGTAATGCAGGTGGTCACAAATAATCGTCGCCATGTTCGGTCTGTGAGTTTCTTCCCGCCTGTTGCACAGTTGCCTCCTTTTGTTGAATTCCAAGCTATGCGGGTTTTTGATGTAAAAGGCTGTCAGTTTGGGGAGCACAAAAAAATGAAAAACATGGAAAGTTTAATTCAGTTGAAGTATCTGAATTTGGCATATACCAATGTGACAGAACTTCCAAAAGAAATTGGGGAGGTTCATTTCTTAGAGACTCTTGATGTTAGAAATTGTCAAATACAAAGTTTACCACCATCATTATGCCAACTGCAGAAGTTGGTGCGACTTTTTGTCAGCCTTGGAGTCACATTGCCAGATAAGATTGGGAAGATGCAAGCATTGGAGGAGCTATCACATGTTGCCATCTTATGCAACTCTTTGAATTTTGTGAAGGCACTAGGGGAGCTGACCAAACTGAGAGTGTTCCGAGTAGATTGCCGGTATTCATGGCTTAACGGGAAGAAACAAGCCCCAAGGCAATCAGTCAGCACGCATGAAGATGTTTTGTTGTCATCTCTGCAAAATTTGTTAAAAAAGAAGAATCTTCGATCACTAGAGATCGACCTTACAAATGGTTCTTCCTTGGTGTTTTCATTGATGAATCCATACTGTCCTCTTCCCCAACTCGAAGAACTTGTCATTTCCAATTCCATTTCCAGAGTTCCAAGGAGCATGAGATCGCTGAAGGACGTTATCCATTTGGAAATCAAGCTTGATAGGATGGAAGAAGAAGATCTCCATATCATCAGAGACATGTCTCATTCACTGCTTTTTCTAAAAATCCACTTGGAAATAACCCCAGAAGAGAGGCTTATCATTGACTCCGAGGGATTTGAGTGTCTGAAGCAATTTGAGTTTTGCTGTGTTGGAATGGGGCTGAAATTTGTGCAAGGGGCTATGCCAGATCTCGAGAAGCTTGATCTTGATATTGGGGTTCGAAAGACCATGTCCAAGTATGGCGGTTTCGACTTTGGCATCAAGAATCTTGAAGCACTCAAACATGTTGGTGTCAAACTTGATTGTCAATATGCTGAAAATCGGGAGATCCAGTCTGCAGAGGCTACTATCAGGAGTGGAGTCCTTCCAAGACGTATAATGCCACAAATTCAAAGGATTGGTGTGAACAGATGAACTTTCTTCCAGAAATAGTTGAATGCTACTGCTTTGGTATTTGCAGGGAACTCATTGGATTCGATTCTAGGCCCTATTGTGAAAGTGTGATGAGAGACAAATAACAGATGCAACACACATCGTTATTTATGGATGATGGTTATGCAACTCTTTGTTAATCATCATATATGAAAATTTAGCTGCTTTTAATAATGT]




>consensus_8849#1
TCAGTGGCCACCTAACCCAACTACCTTGAAGGACACACACTCCACAGTGGAGGAGGCCAA
GGATTTGCTAGGCTAGGACCACACTTGCCGTTCCTAGGTACCTCATTGTTTTTGATGATA
TCTGGAGTACAAAAATGTGGGAGAATCTGATGTCAGTTCTACCTAGAAACAACAAGAAAA
GCAGAGTAATTACTACAACTCGCATGTCCAATGTTGCGAGCTCACGTTCTCCCCGGTCCA
ATGGTCATATCTATGAAATGGAATCTTTAAATGATGCTGACTCCAAAGAGTTATTTTCTA
AAATCATTTTTGACCACAAGGGTAAATGTCCAAAGGCATTGGACGAAATAGCCGATGAAA
TTTTGAAAAAGTGTGGTGGCATACCGTTGGCCATAATTACGTTAGCTAGTTTGCTTGCTA
AAAAACCAAAAACAAGGAAAGAGTGGAAGAGAGTGAAAAGTTCTATTGGCAATGCATGTG
AACTAGAAGGGATGAGACAGACATTATCCCTTAGCTTTTATGACCTGTCTTATGATCTTA
GAAACTGTTTCCTATCATTTAGCTCCTTCCCAGAGGATTATGAAATTGATAGAGAGAGAT
TGGTACTGAGATGGATTGCTGAAGGATTCATTTCGGGGAAAGAACAACAGGAATTAATGG
AGGAAGAAGGAAACAACTACTTTAATGAGCTAGTTAATAGGAGTCTGATTCAGCCAATTG
ATATTCAATATAATGGTTCTGCACGAGCTTGTCGAGTCCATGATCTGATGCTTGAGCTTA
TAGTGTCCCTGTCAAAAGAAGAGAATTTTATCACTACATTGAATGGACCGGAGTGTCTAC
CTATGCCGAGCAAAATTCGATGGTTATCTCTCCATTCCAACGAAAATGAAGTAATGCAGG
TGGTCACAAATAATCGTCGCCATGTTCGGTCTGTGAGTTTCTTCCCGCCTGTTGCACAGT
TGCCTCCTTTTGTTGAATTCCAAGCTATGCGGGTTTTTGATGTAAAAGGCTGTCAGTTTG
GGGAGCACAAAAAAATGAAAAACATGGAAAGTTTAATTCAGTTGAAGTATCTGAATTTGG
CATATACCAATGTGACAGAACTTCCAAAAGAAATTGGGGAGGTTCATTTCTTAGAGACTC
TTGATGTTAGAAATTGTCAAATACAAAGTTTACCACCATCATTATGCCAACTGCAGAAGT
TGGTGCGACTTTTTGTCAGCCTTGGAGTCACATTGCCAGATAAGATTGGGAAGATGCAAG
CATTGGAGGAGCTATCACATGTTGCCATCTTATGCAACTCTTTGAATTTTGTGAAGGCAC
TAGGGGAGCTGACCAAACTGAGAGTGTTCCGAGTAGATTGCCGGTATTCATGGCTTAACG
GGAAGAAACAAGCCCCAAGGCAATCAGTCAGCACGCATGAAGATGTTTTGTTGTCATCTC
TGCAAAATTTGTTAAAAAAGAAGAATCTTCGATCACTAGAGATCGACCTTACAAATGGTT
CTTCCTTGGTGTTTTCATTGATGAATCCATACTGTCCTCTTCCCCAACTCGAAGAACTTG
TCATTTCCAATTCCATTTCCAGAGTTCCAAGGAGCATGAGATCGCTGAAGGACGTTATCC
ATTTGGAAATCAAGCTTGATAGGATGGAAGAAGAAGATCTCCATATCATCAGAGACATGT
CTCATTCACTGCTTTTTCTAAAAATCCACTTGGAAATAACCCCAGAAGAGAGGCTTATCA
TTGACTCCGAGGGATTTGAGTGTCTGAAGCAATTTGAGTTTTGCTGTGTTGGAATGGGGC
TGAAATTTGTGCAAGGGGCTATGCCAGATCTCGAGAAGCTTGATCTTGATATTGGGGTTC
GAAAGACCATGTCCAAGTATGGCGGTTTCGACTTTGGCATCAAGAATCTTGAAGCACTCA
AACATGTTGGTGTCAAACTTGATTGTCAATATGCTGAAAATCGGGAGATCCAGTCTGCAG
AGGCTACTATCAGGAGTGGAGTCCTTCCAAGACGTATAATGCCACAAATTCAAAGGATTG
GTGTGAACAGATGAACTTTCTTCCAGAAATAGTTGAATGCTACTGCTTTGGTATTTGCAG
GGAACTCATTGGATTCGATTCTAGGCCCTATTGTGAAAGTGTGATGAGAGACAAATAACA
GATGCAACACACATCGTTATTTATGGATGATGGTTATGCAACTCTTTGTTAATCATCATA
TATGAAAATTTAGCTGCTTTTAATAATGT

consensusID : consensus_8849#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1160
fasta sequence

                              [GAGTACGAGCACGAGCACCCCCACAAGCTTTGTAGCTCTGCTCTGCTCAGTAGGCAAACAGATCTCAGCAAGATGGCCGAGGTGCTGGCGAGTGGTGCTACCGGGTTGATCACATCACTCCTGGGCAAGCTCGCCAGCCTGCTCGATGACGAGTACACCCTGCTCCGCGAGGTGCGCGGCGACGTGGAGTTCCTCCAGGCCGAGCTGAGCGGCATGGACGACTTGCTGGTACGGCTTGTGGAGATGGAGAAGAATGGACACGGCACCAAGAAGTGGAGGGTGAAGCTGCGCGAGCTCGCCTACGAAGTCGAGGACGGCATCGATTCCTTCACACACCGCCTTGGCTCTGCCCGTGACAGGGCAGGGTTCGTGCGGGGTTTCATGAAGCAGCTGAATCTGATGGTGCGCCACCAGGTCGCCAGGCAGATCCAAGAACTCAGGGACCAAATCGAAGTCGAGTGCGCACGGCAGATGAGGTACACCCAGCTTGGTGGTGGTGGCTCATCATCCATTGACGCCGCCGTAGCTGACCAAATCGACTGCCGCGTGAAGGCGCTGTATGTGGATCCGGACCATCAGCTTGTGGGGATGGATGGTCCGGTGGCGAGCATCGTCGAGCTGCTGACCATGGAAGAAGACGAGTCGTCGGCAAGGCAGCTCCGGATCGTGTCCATCTTTGGCCCTGGAGGTCTAGGCAAGACTACTCTTGCCAATCAGGTGCACCGCAAAATCAAAGGCCAATTTGACTATGCTGCTCTGGTGTCTGTGTCTCAAAGGCCAATCAGGGACATTTTGACCAAGATTGCTCCTTCAGTCATCCCAACTGACAGCAGCAGCAGTTTAGATACATGCCAACTCATCGAAATCGTCAAAGATTTTCTTCAAGACAAGAGGTACGCACACATCTTCAATTCGATTTTTTTTTTTGGATTAGCACAAAATCTGCACCTAGTACATAGAACAGAGACAGGTTAGTTAGCAGAAGCACAAGATGCATAATAGAATTTATCATTGATCTGAGCAAAACTTACACACTGAAAAAGACCTACACCTGGAAAATGTTCAGAAATGTTCCATCTAGTGCTATTCCAGGCACACACAGTTGTCTGACAGATATAATGCTGCATGTGCAAGATAATATGGTTGTTGCTCATTTATAT]

[+] EMBL AK063348             [GAGTACGAGCACGAGCACCCCCACAAGCTTTGTAGCTCTGCTCTGCTCAGTAGGCAAACAGATCTCAGCAAGATGGCCGAGGTGCTGGCGAGTGGTGCTACCGGGTTGATCACATCACTCCTGGGCAAGCTCGCCAGCCTGCTCGATGACGAGTACACCCTGCTCCGCGAGGTGCGCGGCGACGTGGAGTTCCTCCAGGCCGAGCTGAGCGGCATGGACGACTTGCTGGTACGGCTTGTGGAGATGGAGAAGAATGGACACGGCACCAAGAAGTGGAGGGTGAAGCTGCGCGAGCTCGCCTACGAAGTCGAGGACGGCATCGATTCCTTCACACACCGCCTTGGCTCTGCCCGTGACAGGGCAGGGTTCGTGCGGGGTTTCATGAAGCAGCTGAATCTGATGGTGCGCCACCAGGTCGCCAGGCAGATCCAAGAACTCAGGGACCAAATCGAAGTCGAGTGCGCACGGCAGATGAGGTACACCCAGCTTGGTGGTGGTGGCTCATCATCCATTGACGCCGCCGTAGCTGACCAAATCGACTGCCGCGTGAAGGCGCTGTATGTGGATCCGGACCATCAGCTTGTGGGGATGGATGGTCCGGTGGCGAGCATCGTCGAGCTGCTGACCATGGAAGAAGACGAGTCGTCGGCAAGGCAGCTCCGGATCGTGTCCATCTTTGGCCCTGGAGGTCTAGGCAAGACTACTCTTGCCAATCAGGTGCACCGCAAAATCAAAGGCCAATTTGACTATGCTGCTCTGGTGTCTGTGTCTCAAAGGCCAATCAGGGACATTTTGACCAAGATTGCTCCTTCAGTCATCCCAACTGACAGCAGCAGCAGTTTAGATACATGCCAACTCATCGAAATCGTCAAAGATTTTCTTCAAGACAAGAGGTACGCACACATCTTCAATTCGATTTTTTTTTTTGGATTAGCACAAAATCTGCACCTAGTACATAGAACAGAGACAGGTTAGTTAGCAGAAGCACAAGATGCATAATAGAATTTATCATTGATCTGAGCAAAACTTACACACTGAAAAAGACCTACACCTGGAAAATGTTCAGAAATGTTCCATCTAGTGCTATTCCAGGCACACACAGTTGTCTGACAGATATAATGCTGCATGTGCAAGATAATATGGTTG              ]
[+] EMBL CB657859             [                    CCACAAGCTTTGTAGCTCTGCTCTGCTCAGTAGGCAAACAGATCTCAGCAAGATGGCCGAGGTGCTGGCGAGTGGTGCTACCGGGTTGATCACATCACTCCTGGGCAAGCTCGCCAGCCTGCTCGATGACGAGTACACCCTGCTCCGCGAGGTGCGCGGCGACGTGGAGTTCCTCCAGGCCGAGCTGAGCGGCATGGACGACTTGCTGGTACGGCTTGTGGAGATGGAGAAGAATGGACACGGCACCAAGAAGTGGAGGGTGAAGCTGCGCGAGCTCGCCTACGAAGTCGAGGACGGCATCGATTCCTTCACACACCGCCTTGGCTCTGCCCGTGACAGGGCAGGGTTCGTGCGGGGTTTCATGAAGCAGCTGAATCTGATGGTGCGCCACCAGGTCGCCAGGCAGATCCAAGAACTCAGGGACCAAATCGAAGTCGAGTGCGCACGGCAGATGAGGTACACCCAGCTTGGTGGTGGTGGCTCATCATCCATTGACGCCGCCGTAGCTGACCAAATCGACTGCCGCGTGAAGGCGCTGTATGTGGATCCGGACCATCAGCTTGTGGGGATGGATGGTCCGGTGGCGAGCATCGTCGAGCTGCTGACCATGGAAGAAGACGAGTCGTCGGCAAGGCAGCTCCGGATCGTGTCCATCTTTGGCCCTGGAGGTCTAGGCAAGACTACTCTTGCCAATCAGGTGCACCGCAAAATCAAAGGCCAATTTGACTATGCTGCTCTGGTGTCTGTGTCTC AAGGCCAATCAGGNACATTTTGAC                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB657860             [                                                                                                                                                                                                                                                                                                                                                                                 GTGCGGGGTTTCATGAAGCAGCTGAATCTGATGGTGCGCCACCAGGTCGCCAGGCAGATCCAAGAACTCAGGGACCAAATCGAAGTCGAGTGCGCACGGCAGATGAGGTACACCCAGCTTGGTGGTGGTGGCTCATCATCCATTGACGCCGCCGTAGCTGACCAAATCGACTGCCGCGTGAAGGCGCTGTATGTGGATCCGGACCATCAGCTTGTGGGGATGGATGGTCCGGTGGCGAGCATCGTCGAGCTGCTGACCATGGAAGAAGACGAGTCGTCGGCAAGGCAGCTCCGGATCGTGTCCATCTTTGGCCCTGGAGGTCTAGGCAAGACTACTCTTGCCAATCAGGTGCACCGCAAAATCAAAGGCCAATTTGACTATGCTGCTCTGGTGTCTGTGTCTCAAAGGCCAATCAGGGACATTTTGACCAAGATTGCTCCTTCAGTCATCCCAACTGACAGCAGCAGCAGTTTAGATACATGCCAACTCATCGAAATCGTCAAAGATTTTCTTCAAGACAAGAGGTACGCACACATCTTCAATTCGATTTTTTTTTTTGGATTAGCACAAAATCTGCACCTAGTACATAGAACAGAGACAGGTTAGTTAGCAGAAGCACAAGATGCATAATAGAATTTATCATTGATCTGAGCAAAACTTACACACTGAAAAAGACCTACACCTGGAAAATGTTCAGAAATGTTCCATCTAGTGCTATTCCAGGCACACACAGTTGTCTGACAGATATAATGCTGCAGGTGCAAGATAATATGGTTGTTGCTCATTTATAT]




>consensus_8849#2
GAGTACGAGCACGAGCACCCCCACAAGCTTTGTAGCTCTGCTCTGCTCAGTAGGCAAACA
GATCTCAGCAAGATGGCCGAGGTGCTGGCGAGTGGTGCTACCGGGTTGATCACATCACTC
CTGGGCAAGCTCGCCAGCCTGCTCGATGACGAGTACACCCTGCTCCGCGAGGTGCGCGGC
GACGTGGAGTTCCTCCAGGCCGAGCTGAGCGGCATGGACGACTTGCTGGTACGGCTTGTG
GAGATGGAGAAGAATGGACACGGCACCAAGAAGTGGAGGGTGAAGCTGCGCGAGCTCGCC
TACGAAGTCGAGGACGGCATCGATTCCTTCACACACCGCCTTGGCTCTGCCCGTGACAGG
GCAGGGTTCGTGCGGGGTTTCATGAAGCAGCTGAATCTGATGGTGCGCCACCAGGTCGCC
AGGCAGATCCAAGAACTCAGGGACCAAATCGAAGTCGAGTGCGCACGGCAGATGAGGTAC
ACCCAGCTTGGTGGTGGTGGCTCATCATCCATTGACGCCGCCGTAGCTGACCAAATCGAC
TGCCGCGTGAAGGCGCTGTATGTGGATCCGGACCATCAGCTTGTGGGGATGGATGGTCCG
GTGGCGAGCATCGTCGAGCTGCTGACCATGGAAGAAGACGAGTCGTCGGCAAGGCAGCTC
CGGATCGTGTCCATCTTTGGCCCTGGAGGTCTAGGCAAGACTACTCTTGCCAATCAGGTG
CACCGCAAAATCAAAGGCCAATTTGACTATGCTGCTCTGGTGTCTGTGTCTCAAAGGCCA
ATCAGGGACATTTTGACCAAGATTGCTCCTTCAGTCATCCCAACTGACAGCAGCAGCAGT
TTAGATACATGCCAACTCATCGAAATCGTCAAAGATTTTCTTCAAGACAAGAGGTACGCA
CACATCTTCAATTCGATTTTTTTTTTTGGATTAGCACAAAATCTGCACCTAGTACATAGA
ACAGAGACAGGTTAGTTAGCAGAAGCACAAGATGCATAATAGAATTTATCATTGATCTGA
GCAAAACTTACACACTGAAAAAGACCTACACCTGGAAAATGTTCAGAAATGTTCCATCTA
GTGCTATTCCAGGCACACACAGTTGTCTGACAGATATAATGCTGCATGTGCAAGATAATA
TGGTTGTTGCTCATTTATAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8849#0      ACTCTGAGTACGAGCACGAGCACCCCCACAAGCTTTGTAGCTCTGCTCTGCTCAGTAGGC 60
consensus_8849#1      ------------------------------------------------------------
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      AAACAGATCTCAGCAAGATGGCCGAGGTGCTGGCGAGTGGTGCTACCGGGTTGATCACAT 120
consensus_8849#1      ------------------------------------------------------------
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      CACTCCTGGGCAAGCTCGCCAGCCTGCTCGATGACGAGTACACCCTGCTCCGCGAGGTGC 180
consensus_8849#1      ------------------------------------------------------------
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      GCGGCGACGTGGAGTTCCTCCAGGCCGAGCTGAGCGGCATGGACGACTTGCTGGTACGGC 240
consensus_8849#1      ------------------------------------------------------------
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      TTGTGGAGATGGAGAAGAATGGACACGGCACCAAGAAGTGGAGGGTGAAGCTGCGCGAGC 300
consensus_8849#1      ------------------------------------------------------------
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      TCGCCTACGAAGTCGAGGACGGCATCGATTCCTTCACACACCGCCTTGGCTCTGCCCGTG 360
consensus_8849#1      ------------------------------------------------------------
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      ACAGGGCAGGGTTCGTGCGGGGTTTCATGAAGCAGCTGAATCTGATGGTGCGCCACCAGG 420
consensus_8849#1      ------------------------------------------------------------
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      TCGCCAGGCAGATCCAAGAACTCAGGGACCAAATCGAAGTCGAGTGCGCACGGCAGATGA 480
consensus_8849#1      ------------------------------------------------------------
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      GGTACACCCAGCTTGGTGGTGGTGGCTCATCATCCATTGACGCCGCCGTAGCTGACCAAA 540
consensus_8849#1      ------------------------------------------------------------
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      TCGACTGCCGCGTGAAGGCGCTGTATGTGGATCCGGACCATCAGCTTGTGGGGATGGATG 600
consensus_8849#1      ------------------------------------------------------------
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      GTCCGGTGGCGAGCATCGTCGAGCTGCTGACCATGGAAGAAGACGAGTCGTCGGCAAGGC 660
consensus_8849#1      ------------------------------------------------------------
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      AGCTCCGGATCGTGTCCATCTTTGGCCCTGGAGGTCTAGGCAAGACTACTCTTGCCAATC 720
consensus_8849#1      ------------------------------------------------------------
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      AGGTGCACCGCAAAATCAAAGGCCAATTTGACTATGCTGCTCTGGTGTCTGTGTCTCAAA 780
consensus_8849#1      ------------------------------------------------------------
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      GGCCAATCAGGGACATTTTGACCAAGATTGCTCCTTCAGTCATCCCAACTGACAGCAGCA 840
consensus_8849#1      ------TCAGTGGCCACCTAACCCA-ACTACCTTGAAGGACA-CACACTCCACAGTGG-A 51
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      GCAGTTTAGATACATGCCAACTCATCGAAATCGTCAAAGATTTTCTTCAAGACAAGAGGT 900
consensus_8849#1      GGAGGCCAAGGATTTGCTAG---GCTAGGACCACACTTGCCGTTCCT---------AGGT 99
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      ACCTCATTGTTTTTGATGATATCTGGAGTACAAAAATGTGGGAGAATCTGATGTCAGTTC 960
consensus_8849#1      ACCTCATTGTTTTTGATGATATCTGGAGTACAAAAATGTGGGAGAATCTGATGTCAGTTC 159
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      TACCTAGAAACAACAAGAAAAGCAGAGTAATTACTACAACTCGCATGTCCAATGTTGCGA 1020
consensus_8849#1      TACCTAGAAACAACAAGAAAAGCAGAGTAATTACTACAACTCGCATGTCCAATGTTGCGA 219
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      GCTCACGTTCTCCCCGGTCCAATGGTCATATCTATGAAATGGAATCTTTAAATGATGCTG 1080
consensus_8849#1      GCTCACGTTCTCCCCGGTCCAATGGTCATATCTATGAAATGGAATCTTTAAATGATGCTG 279
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      ACTCCAAAGAGTTATTTTCTAAAATCATTTTTGACCACAAGGGTAAATGTCCAAAGGCAT 1140
consensus_8849#1      ACTCCAAAGAGTTATTTTCTAAAATCATTTTTGACCACAAGGGTAAATGTCCAAAGGCAT 339
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      TGGACGAAATAGCCGATGAAATTTTGAAAAAGTGTGGTGGCATACCGTTGGCCATAATTA 1200
consensus_8849#1      TGGACGAAATAGCCGATGAAATTTTGAAAAAGTGTGGTGGCATACCGTTGGCCATAATTA 399
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      CGTTAGCTAGTTTGCTTGCTAAAAAACCAAAAACAAGGAAAGAGTGGAAGAGAGTGAAAA 1260
consensus_8849#1      CGTTAGCTAGTTTGCTTGCTAAAAAACCAAAAACAAGGAAAGAGTGGAAGAGAGTGAAAA 459
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      GTTCTATTGGCAATGCATGTGAACTAGAAGGGATGAGACAGACATTATCCCTTAGCTTTT 1320
consensus_8849#1      GTTCTATTGGCAATGCATGTGAACTAGAAGGGATGAGACAGACATTATCCCTTAGCTTTT 519
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      ATGACCTGTCTTATGATCTTAGAAACTGTTTCCTATCATTTAGCTCCTTCCCAGAGGATT 1380
consensus_8849#1      ATGACCTGTCTTATGATCTTAGAAACTGTTTCCTATCATTTAGCTCCTTCCCAGAGGATT 579
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      ATGAAATTGATAGAGAGAGATTGGTACTGAGATGGATTGCTGAAGGATTCATTTCGGGGA 1440
consensus_8849#1      ATGAAATTGATAGAGAGAGATTGGTACTGAGATGGATTGCTGAAGGATTCATTTCGGGGA 639
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      AAGAACAACAGGAATTAATGGAGGAAGAAGGAAACAACTACTTTAATGAGCTAGTTAATA 1500
consensus_8849#1      AAGAACAACAGGAATTAATGGAGGAAGAAGGAAACAACTACTTTAATGAGCTAGTTAATA 699
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      GGAGTCTGATTCAGCCAATTGATATTCAATATAATGGTTCTGCACGAGCTTGTCGAGTCC 1560
consensus_8849#1      GGAGTCTGATTCAGCCAATTGATATTCAATATAATGGTTCTGCACGAGCTTGTCGAGTCC 759
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      ATGATCTGATGCTTGAGCTTATAGTGTCCCTGTCAAAAGAAGAGAATTTTATCACTACAT 1620
consensus_8849#1      ATGATCTGATGCTTGAGCTTATAGTGTCCCTGTCAAAAGAAGAGAATTTTATCACTACAT 819
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      TGAATGGACCGGAGTGTCTACCTATGCCGAGCAAAATTCGATGGTTATCTCTCCATTCCA 1680
consensus_8849#1      TGAATGGACCGGAGTGTCTACCTATGCCGAGCAAAATTCGATGGTTATCTCTCCATTCCA 879
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      ACGGAAATGAAGTAATGCAGGTGGTCACAAATAATCGTCGCCATGTTCGGTCTGTGAGTT 1740
consensus_8849#1      ACGAAAATGAAGTAATGCAGGTGGTCACAAATAATCGTCGCCATGTTCGGTCTGTGAGTT 939
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      TCTTCCCGCCTGTTGCACAGTTGCCTCCTTTTGTTGAATTCCAAGCTATGCGGGTTTTTG 1800
consensus_8849#1      TCTTCCCGCCTGTTGCACAGTTGCCTCCTTTTGTTGAATTCCAAGCTATGCGGGTTTTTG 999
consensus_8849#2      ------------------GAGTACGAGCACGAGCACCCCCACAAGCTTTGTAGCTCTGCT 42
                                           * *   *    *        ****** **  * * *   

consensus_8849#0      ATGT--AAAAGGCTGTCAGTTTGGGGAGCACAAAAAAATGAAAAACATGGAAAGTTTAAT 1858
consensus_8849#1      ATGT--AAAAGGCTGTCAGTTTGGGGAGCACAAAAAAATGAAAAACATGGAAAGTTTAAT 1057
consensus_8849#2      CTGCTCAGTAGGCAAACAGATCTCAG----CAAGATGGCCGAGGTGCTGGCGAGT--GGT 96
                       **   *  ****   *** *    *    *** *      *     ***  ***    *

consensus_8849#0      TCAGTTGAAGTATCTGAATTTGGCATATACCAATGTGACAGAACTTCCAAAAGAAATTGG 1918
consensus_8849#1      TCAGTTGAAGTATCTGAATTTGGCATATACCAATGTGACAGAACTTCCAAAAGAAATTGG 1117
consensus_8849#2      GCTACCGGGTTGATCACATCACTCCTGGGCAAGCTCGCCAGC-CTGCTCGATGA---CGA 152
                       *    *   *      **    * *   * *    * ***  ** *   * **    * 

consensus_8849#0      GGAGGTTCATTTCTTAGAGACTCTTGATGTTA-GAAATTGTCAAATACAAAGTTTACCAC 1977
consensus_8849#1      GGAGGTTCATTTCTTAGAGACTCTTGATGTTA-GAAATTGTCAAATACAAAGTTTACCAC 1176
consensus_8849#2      GTACACCCTGCTCCGCGAGGTGCGCGGCGACGTGGAGTTCCTCCAGGCCGAGCTGAGCGG 212
                      * *    *   **   ***   *  *  *    * * **     *  *  ** * * *  

consensus_8849#0      CATCATTATGCCAATTGCAGAAGTTGGTGCGACTTTTTGTCAGCCTTGGAGTCACATTGC 2037
consensus_8849#1      CATCATTATGCCAACTGCAGAAGTTGGTGCGACTTTTTGTCAGCCTTGGAGTCACATTGC 1236
consensus_8849#2      CATG-----GACGACTT-----GCTGGTACGGCTTGTGGAGA----TGGAGAAGAATGGA 258
                      ***      * * * *      * **** ** *** * *  *    *****    ** * 

consensus_8849#0      CAGATAAGATTGGGAAGATGCAAGCATTGGAGGAGCTATCACATGTTGCCATCTTATGCA 2097
consensus_8849#1      CAGATAAGATTGGGAAGATGCAAGCATTGGAGGAGCTATCACATGTTGCCATCTTATGCA 1296
consensus_8849#2      CA--CGGCACCAAGAAG-TGGAGGGTGAAGCTGCGCGAGCTCGC-CTACGAAGTCGAGGA 314
                      **      *    **** ** * *     *  * ** * * *    * * *  *   * *

consensus_8849#0      ACTCTTTGAATTTTGTGAAGGCACTAGGGGAGCTGACCA-AACTGAGAGTGTTCCGAGTA 2156
consensus_8849#1      ACTCTTTGAATTTTGTGAAGGCACTAGGGGAGCTGACCA-AACTGAGAGTGTTCCGAGTA 1355
consensus_8849#2      CGGCATCGATTCCTTCACACACCGCCTTGGCTCTGCCCGTGACAGGGCAGGGTTCGTGCG 374
                         * * ** *  *    *  *      **  *** **   ** * *   * * ** *  

consensus_8849#0      GATTGCCGGTATTCATGGCTTAACGGGAAGAAACAAGCCCCAAGGCAATCAGTCAGCACG 2216
consensus_8849#1      GATTGCCGGTATTCATGGCTTAACGGGAAGAAACAAGCCCCAAGGCAATCAGTCAGCACG 1415
consensus_8849#2      GGGTTTCATGAAGCA--GCTGAATCTGATGGTGC--GCCACCAGGTCGCCAGGCAG-ATC 429
                      *  *  *   *  **  *** **   ** *   *  *** * ***    *** *** *  

consensus_8849#0      CATGAAGATGTTTTGTTGTCATCTCTGCAAAATTTGTTAAAAAAGAAGAATCTTCGATCA 2276
consensus_8849#1      CATGAAGATGTTTTGTTGTCATCTCTGCAAAATTTGTTAAAAAAGAAGAATCTTCGATCA 1475
consensus_8849#2      CAAGAA----CTCAGGGACCAAATC---GAAGTCGAGTGCGCACGGCAGAT--------G 474
                      ** ***     *  *    **  **    ** *    *    * *    **         

consensus_8849#0      CTAGAGATCGACCTTACAAATGGTTCTTCCTTGGTGTTTTCATTGATGAATCCATA-CTG 2335
consensus_8849#1      CTAGAGATCGACCTTACAAATGGTTCTTCCTTGGTGTTTTCATTGATGAATCCATA-CTG 1534
consensus_8849#2      AGGTACACCCAGCTTGGTGGTGGTGGCTCATCA-----TCCATTGACGCCGCCGTAGCTG 529
                          * * * * ***     ****   ** *       * ****** *   ** ** ***

consensus_8849#0      TCCTCTTCCCCAACTCGAAGAACTTGTCATTTCCAATTCCATTTCCAGAGTTCCAAGGAG 2395
consensus_8849#1      TCCTCTTCCCCAACTCGAAGAACTTGTCATTTCCAATTCCATTTCCAGAGTTCCAAGGAG 1594
consensus_8849#2      ACCAAATCGACTGCCGCGTGAAGGCGCTGTATGTGGATCCGGACCATCAGCTTGTGGGGA 589
                       **   **  *  *     ***   *   * *     ***    *   ** *    **  

consensus_8849#0      CATGAGATC-GCTGAAGGACGTTATCCATTTGGAAATCAAGCTTGATAGGATGGAAGAAG 2454
consensus_8849#1      CATGAGATC-GCTGAAGGACGTTATCCATTTGGAAATCAAGCTTGATAGGATGGAAGAAG 1653
consensus_8849#2      TGGATGGTCCGGTGGCGAGCATCGTCGAGCTGCTGACCA------------TGGAAGAAG 637
                           * ** * **  *  * *  ** *  **   * **            *********

consensus_8849#0      AAGA-TCTCCATATCATCAGAGACATGTCTCATTCACTGCTTTTTCTAAAAATCCACTTG 2513
consensus_8849#1      AAGA-TCTCCATATCATCAGAGACATGTCTCATTCACTGCTTTTTCTAAAAATCCACTTG 1712
consensus_8849#2      ACGAGTCGTCGGCAAGGCAGCTCCGGATCGTGTCCATCTTTGGCCCTGGAGGTCTAGGCA 697
                      * ** **  *       ***   *   **   * **    *    **  *  ** *    

consensus_8849#0      GAAATAACCCCAGAAGAGAGGCTTATCATTGACTCCGAGG--GATTTGAGTGT-CTGAAG 2570
consensus_8849#1      GAAATAACCCCAGAAGAGAGGCTTATCATTGACTCCGAGG--GATTTGAGTGT-CTGAAG 1769
consensus_8849#2      AGACTACTCTTGCCAATCAGGTGCACCGCAAAATCAAAGGCCAATTTGACTATGCTGCTC 757
                        * **  *     *   ***   * *    * **  ***   ****** * * ***   

consensus_8849#0      CAATTTGAGTTTTGCTGTGTTGGAATGGGGCTGAAATTTGTGCAAGGG-GCTATGCCAGA 2629
consensus_8849#1      CAATTTGAGTTTTGCTGTGTTGGAATGGGGCTGAAATTTGTGCAAGGG-GCTATGCCAGA 1828
consensus_8849#2      TGGTGTCTGTGTCTCAAAGGCCAATCAGGG--ACATTTTGACCAAGATTGCTCCTTCAGT 815
                         * *  ** *  *   *    *   ***    * ****  ****   ***    *** 

consensus_8849#0      TCTCGAGAAGCTTGATCTTGATATTGGGGTTCGAAAGACCATGTCCAAGTATGGCGGT-- 2687
consensus_8849#1      TCTCGAGAAGCTTGATCTTGATATTGGGGTTCGAAAGACCATGTCCAAGTATGGCGGT-- 1886
consensus_8849#2      CATCCCAA---CTGACAGCAGCA--GCAGTTTAGATA--CATGCCAACTCATCGAAATCG 868
                        **   *    ***       *  *  ***   *    **** * *   ** *   *  

consensus_8849#0      TTCGACTTTGGCATCAAGAATCTTGAAGCACTCAAACATGTTGGTGTCAAACTTGATTGT 2747
consensus_8849#1      TTCGACTTTGGCATCAAGAATCTTGAAGCACTCAAACATGTTGGTGTCAAACTTGATTGT 1946
consensus_8849#2      TCAAAGATTTTCTTCAAGA--CAAGAGGTACGCACACATCTTCAATTCGATTTTTTTTTT 926
                      *   *  **  * ******  *  ** * ** ** **** **    ** *  **  ** *

consensus_8849#0      CA-ATATGCTGAAAATCGGGA---GATCCAGTCTGCAGAGGCTACTATCAGGAGTGGAGT 2803
consensus_8849#1      CA-ATATGCTGAAAATCGGGA---GATCCAGTCTGCAGAGGCTACTATCAGGAGTGGAGT 2002
consensus_8849#2      TGGATTAGCACAAAATCTGCACCTAGTACATAGAACAGAGACAGGT-TAGTTAGCAGAAG 985
                         **  **  ****** * *     * **     ***** *   * *    **  **  

consensus_8849#0      CCTTCCAAGACGTATAATGCCACAAATTCAAAGGATTGGTGTGAACAGATGAACTTTCTT 2863
consensus_8849#1      CCTTCCAAGACGTATAATGCCACAAATTCAAAGGATTGGTGTGAACAGATGAACTTTCTT 2062
consensus_8849#2      C---ACAAGATGCATAATA----GAATTTATC--ATTGATCTGAGCAA---AACTTACAC 1033
                      *    ***** * *****      **** *    **** * *** **    ***** *  

consensus_8849#0      CCAGAAATAGTTGAATGCTACTGCTTTGGTATTTGCAGGGAACTCATTGGATTCGATTCT 2923
consensus_8849#1      CCAGAAATAGTTGAATGCTACTGCTTTGGTATTTGCAGGGAACTCATTGGATTCGATTCT 2122
consensus_8849#2      ACTGAAAAAGACCTACAC--CTGGAA-AATGTTCAGAAATGTTCCATCTAGTGCTATTCC 1090
                       * **** **    *  *  ***      * **   *       ***    * * **** 

consensus_8849#0      AGGCCCTATTGTGAAAGTGTGATGAGAGACAAATAACAGATGCAACACA-CATCGTTATT 2982
consensus_8849#1      AGGCCCTATTGTGAAAGTGTGATGAGAGACAAATAACAGATGCAACACA-CATCGTTATT 2181
consensus_8849#2      AGGCACA--CACAGTTGTCTGACAGATATAATGCTGCATGTGCAAGATAATATGGTTGTT 1148
                      **** *          ** ***        *     **  ***** * *  ** *** **

consensus_8849#0      TATGGATGATGGTTATGCAACTCTTTGTTAATCATCATATATGAAAATTTAGCTGCTTTT 3042
consensus_8849#1      TATGGATGATGGTTATGCAACTCTTTGTTAATCATCATATATGAAAATTTAGCTGCTTTT 2241
consensus_8849#2      GCTCATTTATAT------------------------------------------------ 1160
                        *   * **                                                  

consensus_8849#0      AATAATGTCATGTCATCTAAAGTATGCTGGTGATCTTTAGTTCTTTTGTGATGTAGACGG 3102
consensus_8849#1      AATAATGT---------------------------------------------------- 2249
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      ATGTTATGTAAACAACGTAATAATTTGGCTCTACCTTCTCATGAAGCAGAGGCCGTGCTT 3162
consensus_8849#1      ------------------------------------------------------------
consensus_8849#2      ------------------------------------------------------------
                                                                                  

consensus_8849#0      TTTTTCACTATTAAAAAAAATTCTCAAAAAAAAAAAAAAAAAA 3205
consensus_8849#1      -------------------------------------------
consensus_8849#2      -------------------------------------------